Psyllid ID: psy4510
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | 2.2.26 [Sep-21-2011] | |||||||
| Q1JQD2 | 446 | Glutamate-rich WD repeat- | yes | N/A | 0.516 | 0.939 | 0.489 | 1e-116 | |
| Q5XI13 | 445 | Glutamate-rich WD repeat- | yes | N/A | 0.501 | 0.914 | 0.490 | 1e-114 | |
| Q810D6 | 446 | Glutamate-rich WD repeat- | yes | N/A | 0.346 | 0.630 | 0.573 | 2e-93 | |
| Q9BQ67 | 446 | Glutamate-rich WD repeat- | yes | N/A | 0.349 | 0.636 | 0.568 | 8e-93 | |
| Q9P783 | 480 | Ribosome assembly protein | yes | N/A | 0.502 | 0.85 | 0.401 | 7e-84 | |
| Q54ED4 | 482 | Glutamate-rich WD repeat- | yes | N/A | 0.498 | 0.840 | 0.398 | 4e-78 | |
| Q04225 | 511 | Ribosome assembly protein | yes | N/A | 0.295 | 0.469 | 0.396 | 3e-42 | |
| Q7S7N3 | 446 | Histone acetyltransferase | N/A | N/A | 0.310 | 0.565 | 0.304 | 1e-26 | |
| Q4WEI5 | 436 | Histone acetyltransferase | no | N/A | 0.290 | 0.541 | 0.309 | 2e-25 | |
| Q2UA71 | 436 | Histone acetyltransferase | no | N/A | 0.290 | 0.541 | 0.309 | 9e-25 |
| >sp|Q1JQD2|GRWD1_BOVIN Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus GN=GRWD1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/468 (48%), Positives = 284/468 (60%), Gaps = 49/468 (10%)
Query: 41 ESKEEKEKKTRKVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDE 98
ES+E K +VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD
Sbjct: 20 ESQETGSKGQAQVYLPGRGPPLREGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDN 79
Query: 99 RTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKR 158
RT P TLY AGTQ++ NRL++++M NL H K
Sbjct: 80 RTELPLTLYLCAGTQAESSQSNRLMMLRMHNL-----------------------HGTK- 115
Query: 159 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP 218
P PP S + + LA I+ R +W + ++P
Sbjct: 116 ------PPPPEGSDDEEEEDDEEDEEERKPQLELAMVPHYGGIN----RVRVSW-LGEEP 164
Query: 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLA---EHNKKRGKGPGIPTPPLFSFSGHLTEG 275
+ G + ++ L+ LQ VDDP LA + R K P+F+FSGH+ EG
Sbjct: 165 VAGVWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQTRMK-------PIFAFSGHMGEG 217
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
FA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E V
Sbjct: 218 FALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVF 277
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
ASCS D SIRIWD R +K+CMLT AH DVNVI+W+ EP ++SGGDDG + VWDL
Sbjct: 278 ASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLSGGDDGALKVWDL 337
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455
R+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E E +
Sbjct: 338 RQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAGDAETD 397
Query: 456 --LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
L DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 398 PGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 445
|
Bos taurus (taxid: 9913) |
| >sp|Q5XI13|GRWD1_RAT Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus GN=Grwd1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/457 (49%), Positives = 278/457 (60%), Gaps = 50/457 (10%)
Query: 52 KVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAV 109
+VYLPG PL +GE LV D AYV+ H AQTGAPCLSFDI++D LGD RT P +LY
Sbjct: 31 QVYLPGRGPPLGEGEELVMDEEAYVLYHRAQTGAPCLSFDIVRDHLGDNRTELPLSLYLC 90
Query: 110 AGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPL 169
AGTQ++ NRL++++M NL T R + +D + + + P + +
Sbjct: 91 AGTQAESAQSNRLMMLRMHNLHGT-----RPPPSEGSDDEDDEDEEDEEERKPQLELAMV 145
Query: 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDL 229
+ G + W EP AG W + +
Sbjct: 146 PHYGG--INRVRVSWLGEEP------------------VAGVW-----------SEKGQV 174
Query: 230 QWSDLKTALQTVDDPFQLA---EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
+ L+ LQ VDDP LA + R K P+FSF+GH+ EGFA+DWS PG
Sbjct: 175 EVFALRRLLQVVDDPQALAIFLRDEQARVK-------PIFSFAGHMGEGFALDWSPRVPG 227
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E V ASCS D SIRI
Sbjct: 228 RLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRI 287
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD R K+CMLT AH DVNVISW+R EP ++SGGDDG + VWDLR+FK GS VAT
Sbjct: 288 WDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVAT 347
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE--LKDLPSQLL 464
FK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E + E + L LP QLL
Sbjct: 348 FKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLL 407
Query: 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
F+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 408 FVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 444
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q810D6|GRWD1_MOUSE Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 205/293 (69%), Gaps = 12/293 (4%)
Query: 214 VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA---EHNKKRGKGPGIPTPPLFSFSG 270
+ ++P+ G + ++ L+ LQ VDDP LA + R K P+FSF+G
Sbjct: 160 LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIK-------PIFSFAG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++N+H+WTP E G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 333 KVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ E + L LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 393 ETETDPGLAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 445
|
Mus musculus (taxid: 10090) |
| >sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 165/290 (56%), Positives = 203/290 (70%), Gaps = 6/290 (2%)
Query: 214 VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 273
+ ++P+ G + ++ L+ LQ V++P LA + P+FSF+GH+
Sbjct: 160 LGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQA----QMKPIFSFAGHMG 215
Query: 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333
EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP E
Sbjct: 216 EGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENT 275
Query: 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393
V ASCS D SIRIWD R +K+CMLT AH DVNVISW+R EP ++SGGDDG + +W
Sbjct: 276 VFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGALKIW 335
Query: 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
DLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD QI WDLAVERD E E
Sbjct: 336 DLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVE 395
Query: 454 AE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
A+ L DLP QLLF+H G+ E+KELHWHPQ PG ++STA SGF IFRTIS
Sbjct: 396 ADPGLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSGFTIFRTIS 445
|
Homo sapiens (taxid: 9606) |
| >sp|Q9P783|RRB1_SCHPO Ribosome assembly protein rrb1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrb1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 312 bits (799), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 190/473 (40%), Positives = 261/473 (55%), Gaps = 65/473 (13%)
Query: 40 DESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDER 99
DE ++ + ++ +LPG ++ E LV DPS Y MLH Q P LSFDI++D LG+ER
Sbjct: 61 DEEEQNDAQPSKIPWLPGGKINADEKLVADPSVYEMLHNIQVKWPFLSFDILQDSLGEER 120
Query: 100 TAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDD---ENDPFQLAEHNK 156
A+P +Y V G+Q+ N N L VMK+S L T+ D + D+ E DP + EH
Sbjct: 121 RAWPHQMYLVGGSQALDSNDNELTVMKLSQLYKTQHDENDDASDNSDVEEDP--ILEHKS 178
Query: 157 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ 216
KG + + +S++ +LA+ +HIW
Sbjct: 179 ISTKG-----------ACNRVRSARRPANSSKESLLASFHETGKVHIW------------ 215
Query: 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276
D+ L+++D P + + PL++ + H TEG+
Sbjct: 216 ----------------DIAPHLRSLDSPGVMVSRKENS---------PLYTVNRHKTEGY 250
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
A+DWS E +L +GD I + T G WQ D P + HT +VEDLQWSP EK V +
Sbjct: 251 ALDWSPFEYSLL-SGDNANEIFL-TKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFS 308
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-DVNVISWNRTEP-LIVSGGDDGCIHVWD 394
SCS D + RIWD R K+ LT+ NAH DVNV+SWN P L+ +G D+G VWD
Sbjct: 309 SCSCDGTFRIWDVRN-KQKTSALTV-NAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWD 366
Query: 395 LRRFKKGSSVAT----FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE-I 449
LR K SSVAT FK H AP+ ++EWHP E S GAD+QI+LWDL+VE D E
Sbjct: 367 LRSLKSSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEEQ 426
Query: 450 EQREAE-LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ R AE L+D+P QL+FIH+GQ+EIKE+HWH Q+PGTI+STA +G N+F+TI+
Sbjct: 427 DSRAAEGLQDVPPQLMFIHMGQQEIKEMHWHRQIPGTIVSTAMTGINVFKTIT 479
|
Involved in regulation of L3 expression and stability and plays a role in early 60S ribosomal subunit assembly. May be required for proper assembly of pre-ribosomal particles during early ribosome biogenesis, presumably by targeting L3 onto the 35S precursor rRNA. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium discoideum GN=grwd1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 251/459 (54%), Gaps = 54/459 (11%)
Query: 48 KKTRKVYLPGT-PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTL 106
K +KV+ G PL++ E L YD +AY M+H PCLSF IKDELG +R YP T+
Sbjct: 66 KGPKKVWRAGVDPLEEDEVLDYDSTAYDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTM 125
Query: 107 YAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPT 166
Y VAGTQ+ + N++I+MK L T+ D+E +D+++D + ++ K
Sbjct: 126 YLVAGTQADEAKNNKVIIMKAKQLHKTKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPEL 185
Query: 167 PPLF-SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS 225
F + +G + +MD S ++AT R+++IW N
Sbjct: 186 QLAFINHNGAVNRIRSMDQQS---NIVATWSDNRSVYIW-------------------NI 223
Query: 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP 285
A L+ D +T P Q T PL + S H EG+A+DWS
Sbjct: 224 ANHLKALDNETVA-----PKQ---------------TAPLHTISNHSIEGYALDWSPKIA 263
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
G LATGDC +I + E+ W+ D + GHT SVED+QWSP E++V ASCS+D ++R
Sbjct: 264 GRLATGDCNNSIFVTNASES-TWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVR 322
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
IWD R K AHT+DVNVISW+R E L+VSG DDG VWDLR FK S V
Sbjct: 323 IWDIR----KPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPV 378
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS-EIEQREAELKD---LP 460
+ FK+HT P+T++EW+P E S +DDQ+ +WD ++E D+ E A D P
Sbjct: 379 SDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQYP 438
Query: 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499
QL FIH GQ +IKE+HWHPQ+P IST+ GFNIF++
Sbjct: 439 PQLFFIHQGQHDIKEVHWHPQIPHVAISTSIDGFNIFKS 477
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|Q04225|RRB1_YEAST Ribosome assembly protein RRB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRB1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 150/262 (57%), Gaps = 22/262 (8%)
Query: 258 PGIPTP-----PLFSFSGH-LTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAGAWQV 310
PG P P+ + H EG+ +DWS + G L +GDC I+ +T R W
Sbjct: 253 PGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGALLSGDCSGQIY-FTQRHTSRWVT 311
Query: 311 DQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369
D++P V + S+ED+QWS E V A+ D IRIWDTR K + A +DV
Sbjct: 312 DKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYIRIWDTRSKKHKPAISV--KASNTDV 369
Query: 370 NVISW-NRTEPLIVSGGDDGCIHVWDLRRFKKGSS-----VATFKHHTAPVTTVEWHPTE 423
NVISW ++ L+ SG D+G VWDLR+F ++ VA + H +T++ ++P +
Sbjct: 370 NVISWSDKIGYLLASGDDNGTWGVWDLRQFTPSNADAVQPVAQYDFHKGAITSIAFNPLD 429
Query: 424 SSTFASGGADDQIALWDLAVERD-SEIEQREAELKDL---PSQLLFIHLGQKEIKELHWH 479
S A G D+ + LWDL+VE D EI+Q+ AE K+L P QLLF+H QKE+K++ WH
Sbjct: 430 ESIVAVGSEDNTVTLWDLSVEADDEEIKQQAAETKELQEIPPQLLFVHW-QKEVKDVKWH 488
Query: 480 PQLPGTIISTANSGFNIFRTIS 501
Q+PG ++ST G N+++TIS
Sbjct: 489 KQIPGCLVSTGTDGLNVWKTIS 510
|
Involved in regulation of L3 expression and stability and plays a role in early 60S ribosomal subunit assembly. May be required for proper assembly of pre-ribosomal particles during early ribosome biogenesis, presumably by targeting L3 onto the 35S precursor rRNA. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q7S7N3|HAT2_NEUCR Histone acetyltransferase type B subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hat-2 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296
A VD + + K G P+P L GH EGF ++W+ E G L TG +
Sbjct: 157 ATLAVDGRVLIFDRTKHSITPSGTPSPQL-ELIGHKEEGFGLNWNPHEEGCLVTGSEDKT 215
Query: 297 IHIWTPR--EAGAWQVD-QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN 353
+ +W + E + Q+ + H++ V D+Q P K + + S DL+++I D R
Sbjct: 216 VLLWDLKTYEGTSKQLKYSRKYTHHSHIVNDVQHHPLVKSWIGTVSDDLTLQIIDVRRPE 275
Query: 354 TKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
T + N H+ +N +++N R E +I + D I +WD+R K S V T + H
Sbjct: 276 TDKAAIVARNGHSDAINALAFNPRVETIIATASADKTIGIWDMRNMK--SKVHTLEGHQD 333
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-K 471
VT++EWHPTES+ SG D ++ WD++ D EQ + + +D P +LLF+H G
Sbjct: 334 AVTSLEWHPTESAILGSGSYDRRLLFWDISRVGD---EQTQDDAEDGPPELLFMHGGHTN 390
Query: 472 EIKELHWHPQLPGTIISTANSGF 494
+ + W+ P + S A
Sbjct: 391 HLADFSWNRNDPWLVCSAAEDNL 413
|
Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates 'Lys-12' of histone H4 which is required for telomeric silencing. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) |
| >sp|Q4WEI5|HAT2_ASPFU Histone acetyltransferase type B subunit 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=hat2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 13/249 (5%)
Query: 254 RGKGPGIPT---PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGA 307
R K P +PT P GH EGF + WS G LATG + + IW T +
Sbjct: 168 RSKHPSLPTGQVNPQMELIGHTKEGFGLSWSPHTAGQLATGSEDKTVRIWDLTTYSKGNK 227
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
+ H++ V D+Q+ P ++ + S D++++I D R T + H
Sbjct: 228 LLKPSRTYTHHSSIVNDVQYHPLHSSLIGTVSDDITLQILDIRESETTRAAASTEGQHRD 287
Query: 368 DVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+N I++N E ++ +G D I +WDLR K + + + + HT VT++ WHP E +
Sbjct: 288 AINAIAFNPAAETVLATGSADKTIGLWDLRNLK--TKLHSLESHTDSVTSISWHPFEEAV 345
Query: 427 FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGT 485
AS D +IA WDL+ R E EQ + +D P +LLF H G I + W+ P
Sbjct: 346 LASASYDRKIAFWDLS--RAGE-EQTPEDAQDGPPELLFQHGGHTNRISDFSWNLNDPWV 402
Query: 486 IISTANSGF 494
+ S A
Sbjct: 403 LCSAAEDNL 411
|
Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates 'Lys-12' of histone H4 which is required for telomeric silencing. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) |
| >sp|Q2UA71|HAT2_ASPOR Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=hat2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 254 RGKGPGIPT---PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
R K P +PT P GH EGF + WS G L TG + + +W
Sbjct: 168 RSKHPSLPTGTVNPQMELLGHTKEGFGLSWSPHTAGHLVTGSEDKTVRLWDLTTYTKGNK 227
Query: 311 DQKP---LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
KP H++ V D+Q+ P ++ + S D++++I D R T + H
Sbjct: 228 ALKPSRTYTHHSSIVNDVQYHPLHSSLIGTVSDDITLQILDIREAETTRAAASAEGQHRD 287
Query: 368 DVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+N I++N E ++ +G D I +WDLR K + + T + HT VT++ WHP E S
Sbjct: 288 AINAIAFNPAAETVLATGSADKSIGLWDLRNLK--TKLHTLECHTDSVTSLSWHPFEESV 345
Query: 427 FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGT 485
AS D +I WDL+ R E EQ + +D P +LLF+H G I + W+ P
Sbjct: 346 LASASYDRKIMFWDLS--RSGE-EQTPDDAQDGPPELLFMHGGHTNRISDFSWNLNDPWV 402
Query: 486 IISTANSGF 494
+ S A
Sbjct: 403 LCSAAEDNL 411
|
Regulatory subunit of the histone acetylase B (HAT-B) complex. The complex acetylates 'Lys-12' of histone H4 which is required for telomeric silencing. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | ||||||
| 312385620 | 465 | hypothetical protein AND_00555 [Anophele | 0.546 | 0.954 | 0.496 | 1e-124 | |
| 195384625 | 464 | GJ22462 [Drosophila virilis] gi|19414581 | 0.541 | 0.948 | 0.503 | 1e-123 | |
| 195455404 | 457 | GK23014 [Drosophila willistoni] gi|19417 | 0.523 | 0.929 | 0.509 | 1e-122 | |
| 195028201 | 468 | GH20229 [Drosophila grimshawi] gi|193902 | 0.535 | 0.929 | 0.508 | 1e-122 | |
| 194864182 | 458 | GG23179 [Drosophila erecta] gi|190662678 | 0.536 | 0.951 | 0.511 | 1e-122 | |
| 157136915 | 464 | wd-repeat protein [Aedes aegypti] gi|108 | 0.518 | 0.907 | 0.514 | 1e-121 | |
| 195120556 | 460 | GI19400 [Drosophila mojavensis] gi|19390 | 0.532 | 0.939 | 0.498 | 1e-121 | |
| 157124910 | 463 | wd-repeat protein [Aedes aegypti] gi|108 | 0.518 | 0.909 | 0.514 | 1e-120 | |
| 195580844 | 456 | GD10383 [Drosophila simulans] gi|1941922 | 0.508 | 0.905 | 0.518 | 1e-120 | |
| 58376463 | 458 | AGAP007125-PA [Anopheles gambiae str. PE | 0.5 | 0.886 | 0.522 | 1e-120 |
| >gi|312385620|gb|EFR30067.1| hypothetical protein AND_00555 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/485 (49%), Positives = 305/485 (62%), Gaps = 41/485 (8%)
Query: 21 NDSDEDMEQGEESKDKTKPDESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQ 80
N D +E + +DK + + KVYLPG LD E LV D SAY+MLH+A
Sbjct: 17 NIEDAILEDASDEEDKEETTNGGGGGGRSKAKVYLPGQALDNDEELVCDESAYIMLHQAH 76
Query: 81 TGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERE 140
TGAPCLSFD+++D LGD+R +P T + VAGTQ+ + + N +IVMKMSN+ T+ RE
Sbjct: 77 TGAPCLSFDVVQDPLGDDREEFPLTAFLVAGTQAARTHVNGVIVMKMSNMNRTQ----RE 132
Query: 141 LEDDENDPFQLAEHNKKRGKGPGIPT--PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 198
+DDE++ ++ G P L +G + ++ T+ +A+
Sbjct: 133 KDDDESEDSGEESDDEDVGGDGKTPNLNCALIKHAGCVNRLRVTTFNGTQ--YVASWSEM 190
Query: 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258
+HI+ E L VDD + + + G
Sbjct: 191 GRVHIYNINEQ----------------------------LAAVDDNHACRTYQQNK-VGD 221
Query: 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318
G+ P F+FSGH EGFA+DW T G+LATGDC+R+IHIW P + G+W VDQ+PLVGH
Sbjct: 222 GVK--PDFTFSGHQKEGFAIDWCPTTRGMLATGDCRRDIHIWRPNDKGSWNVDQRPLVGH 279
Query: 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378
T+SVED+QWSP E VLASCSVD SIRIWD R +K+CMLT N H SDVNVISWNR E
Sbjct: 280 TDSVEDIQWSPNEANVLASCSVDKSIRIWDCRAAPSKACMLTADNVHESDVNVISWNRNE 339
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438
PLI SGGDDG +H+WDLR+F+ + VATFKHHT +TTVEWHP ES+ ASGG DDQIAL
Sbjct: 340 PLIASGGDDGVLHIWDLRQFQTKTPVATFKHHTDHITTVEWHPKESTILASGGDDDQIAL 399
Query: 439 WDLAVERD-SEIEQR-EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496
WDL+VE+D +E E + LK+LP QLLFIH GQKEIKELHWHPQL G I+STA+SGFN+
Sbjct: 400 WDLSVEKDEAEAEMNDDPNLKELPPQLLFIHQGQKEIKELHWHPQLKGVILSTAHSGFNV 459
Query: 497 FRTIS 501
FRTIS
Sbjct: 460 FRTIS 464
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195384625|ref|XP_002051015.1| GJ22462 [Drosophila virilis] gi|194145812|gb|EDW62208.1| GJ22462 [Drosophila virilis] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/506 (50%), Positives = 321/506 (63%), Gaps = 66/506 (13%)
Query: 19 VDNDSDE-DME--QGEESKDKTKPDESKEEKE-------KKTRKVYLPGTPLDKGESLVY 68
+DN +DE +ME + E+++ +PD +E K ++VYLPG L + E LV
Sbjct: 1 MDNANDEIEMEVVEPEDAESDMEPDSDNDEDADGEPGTTKTPKQVYLPGKTLAEDEELVC 60
Query: 69 DPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMS 128
D SAYVMLH+A TGAPCLSFDI+ DELG R ++P T Y VAGTQ+ + + N LIVMKMS
Sbjct: 61 DESAYVMLHQASTGAPCLSFDIVPDELGTGRESFPMTAYIVAGTQAARTHVNNLIVMKMS 120
Query: 129 NLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG--------- 179
NL T++ ++ EL+D+E + Q +K K P + T L G +
Sbjct: 121 NLHKTQDGDDDELDDEELEDDQDDVADKSELKKPQM-TCALIKHQGCVNRVRARRMGNNV 179
Query: 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
FA WS E G ++IW +L LQ
Sbjct: 180 FAASWS--ELG---------RVNIW----------------------------NLSQQLQ 200
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
V+D L ++ ++ T P+F+FSGH EGFA+DWS + GVLATGDC+R+IHI
Sbjct: 201 AVEDAQLLKQYEQQSASNE---TRPVFTFSGHQQEGFAIDWSPSAEGVLATGDCRRDIHI 257
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML 359
W+P E G W+VDQ+PLVGHT SVEDLQWSP E+ VLASCSVD +IRIWD R K+CML
Sbjct: 258 WSPLEDGTWKVDQRPLVGHTASVEDLQWSPNERSVLASCSVDKTIRIWDCRAAPQKACML 317
Query: 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
T NAH SD+NVISWN TEP I SGGDDG +H+WDLR+FK +ATFKHHT +TTVEW
Sbjct: 318 TCENAHESDINVISWNHTEPFIASGGDDGFLHIWDLRQFKTQKPIATFKHHTDHITTVEW 377
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEI----EQREAELKDLPSQLLFIHLGQKEIKE 475
+P+E++ ASGG DDQIALWDLAVE+D++ Q + EL LP QLLFIH GQKEIKE
Sbjct: 378 NPSEATVLASGGDDDQIALWDLAVEQDADQAPAPAQNDEELNKLPPQLLFIHQGQKEIKE 437
Query: 476 LHWHPQLPGTIISTANSGFNIFRTIS 501
LHWH QLPG ++STA+SGFNIFRTIS
Sbjct: 438 LHWHAQLPGVLLSTAHSGFNIFRTIS 463
|
Source: Drosophila virilis Species: Drosophila virilis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195455404|ref|XP_002074708.1| GK23014 [Drosophila willistoni] gi|194170793|gb|EDW85694.1| GK23014 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/485 (50%), Positives = 311/485 (64%), Gaps = 60/485 (12%)
Query: 31 EESKDKTKPDESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDI 90
E+++ +P+ E + K+ ++VYLPG L + E LV D SAYVMLH+A TGAPCLSFDI
Sbjct: 18 EDAESDMEPESDDEGESKQVKEVYLPGQKLAEDEELVCDESAYVMLHQASTGAPCLSFDI 77
Query: 91 IKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQ 150
I DELG R ++P T Y VAGTQ+ + + N LIVMKMSNL T+ED++ + +++E + Q
Sbjct: 78 IPDELGKGRESFPLTAYIVAGTQAARTHVNNLIVMKMSNLHKTQEDDDDDEDEEELEDDQ 137
Query: 151 LAEHNKKRGKGPGIPTPPLFSFSGHLTEG---------FAMDWSSTEPGVLATGDCKRNI 201
NK+ K P + T L G + FA WS E G +
Sbjct: 138 DEVANKEELKKPQM-TCALIKHQGCVNRVRARRLGNTVFAASWS--ELG---------RV 185
Query: 202 HIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261
+IW +L LQ V+D L ++ + P
Sbjct: 186 NIW----------------------------NLTQPLQAVEDAQLLKQYEQSEALRPA-- 215
Query: 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-AWQVDQKPLVGHTN 320
F+FSGH EG+A+DWSS GVLATGDC+R+IHIW+P E G +W+VDQ+PLVGHT
Sbjct: 216 ----FTFSGHQQEGYAVDWSSCADGVLATGDCRRDIHIWSPLEDGTSWKVDQRPLVGHTQ 271
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
SVEDLQWSP E+ VLASCSVD SIRIWD R K+CMLT +AH SD+NVISWN TEP
Sbjct: 272 SVEDLQWSPNERSVLASCSVDKSIRIWDCRAAPQKACMLTCADAHESDINVISWNHTEPF 331
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I SGGDDG +H+WDLR+F+ +ATFKHHT +TTVEW P+E++ ASGG DDQIALWD
Sbjct: 332 IASGGDDGYLHIWDLRQFQSQKPIATFKHHTDHITTVEWSPSEATVLASGGDDDQIALWD 391
Query: 441 LAVERDSEIEQ----REAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496
LAVE+D++ EQ E +L LP QLLFIH GQKEIKELHWH Q+PG ++STA+SGFNI
Sbjct: 392 LAVEKDADQEQANTGNEDDLNKLPPQLLFIHQGQKEIKELHWHAQMPGVLLSTAHSGFNI 451
Query: 497 FRTIS 501
FRTIS
Sbjct: 452 FRTIS 456
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195028201|ref|XP_001986965.1| GH20229 [Drosophila grimshawi] gi|193902965|gb|EDW01832.1| GH20229 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/492 (50%), Positives = 310/492 (63%), Gaps = 57/492 (11%)
Query: 26 DMEQGEESKDKTKPDESKEE-KEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAP 84
D E ES D +E++ + K T++VYLPG + + E LV D SAYVMLH+A TGAP
Sbjct: 17 DAESDMESDDSDNDEETEADGTTKTTKQVYLPGKTIAEDEELVCDESAYVMLHQASTGAP 76
Query: 85 CLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDD 144
CLSFDI+ DELG R ++P T Y VAGTQ+ + + N LIVMKMSNL T++D+ +DD
Sbjct: 77 CLSFDIVPDELGKGRESFPMTAYIVAGTQASRTHVNNLIVMKMSNLHKTQDDDGENDDDD 136
Query: 145 ENDPFQLAE-HNKKRGKGPGIPTPPLFSFSGHLTE---------GFAMDWSSTEPGVLAT 194
E + +K K P + T L G + FA WS E G
Sbjct: 137 EELEDDQDDVADKSELKKPEM-TCALIKHQGCVNRVRARRMGNNVFAASWS--ELG---- 189
Query: 195 GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254
++IW L + ED Q L + +++
Sbjct: 190 -----RVNIWN-------------LSQQLQAVEDAQ----------------LLKQYEQQ 215
Query: 255 GKGPGIP-TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK 313
G +P + P+++FSGH EGFA+DWS GVLATGDC+R+IHIW+P E G W+VDQ+
Sbjct: 216 SLGSDVPGSRPIYTFSGHQQEGFAIDWSPCAEGVLATGDCRRDIHIWSPLEDGTWKVDQR 275
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
PL+GHT SVEDLQWSP E+ VLASCSVD SIRIWD R K+CMLT NAH SD+NVIS
Sbjct: 276 PLLGHTASVEDLQWSPNERSVLASCSVDKSIRIWDCRAAPQKACMLTCENAHESDINVIS 335
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
WN TEP I SGGDDG +H+WDLR+FK +ATFKHHT +TTVEW+P E++ ASGG D
Sbjct: 336 WNHTEPFIASGGDDGFLHIWDLRQFKTQKPIATFKHHTDHITTVEWNPNEATVLASGGDD 395
Query: 434 DQIALWDLAVERDSEI----EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489
DQIALWDLAVE+D++ Q E EL LP QLLFIH GQKEIKELHWHPQ+PG ++ST
Sbjct: 396 DQIALWDLAVEKDADQAQAPAQNEDELNKLPPQLLFIHQGQKEIKELHWHPQMPGVLLST 455
Query: 490 ANSGFNIFRTIS 501
A+SGFNIFRTIS
Sbjct: 456 AHSGFNIFRTIS 467
|
Source: Drosophila grimshawi Species: Drosophila grimshawi Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194864182|ref|XP_001970811.1| GG23179 [Drosophila erecta] gi|190662678|gb|EDV59870.1| GG23179 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/485 (51%), Positives = 306/485 (63%), Gaps = 49/485 (10%)
Query: 22 DSDEDMEQGEESKDKTKPDESKEEKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQT 81
D++ DM S ++ E K KE VYLPGT L E LV D SAYVMLH+A T
Sbjct: 17 DAESDMSSNSGSDEEDDNAEPKVPKE-----VYLPGTKLADDEELVCDESAYVMLHQAST 71
Query: 82 GAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNEREL 141
GAPCLSFD+I DELG R ++P T Y VAGTQ+ + + N LIVMKMSNL T++D+ E
Sbjct: 72 GAPCLSFDVIPDELGTGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDDDGDED 131
Query: 142 EDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 201
ED+E + +Q +++ K P + T L G +
Sbjct: 132 EDEELEDYQDDVADREELKKPQM-TCALIKHQGCVN------------------------ 166
Query: 202 HIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGI 260
+V + LG NS WS+L + + + P Q E + +
Sbjct: 167 -----------RVRARRLG---NSVYAASWSELGRVNIWDLTQPLQAVEDAQMAKQYEQS 212
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320
P+F+F GH EGFA+DWS + GVLATGDC+R+IH+WTP E G W+VDQ+PLVGH+
Sbjct: 213 ELRPVFTFGGHQQEGFAIDWSPSSDGVLATGDCRRDIHVWTPVEDGTWKVDQRPLVGHSQ 272
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
SVEDLQWSP E+ VLASCSVD +IRIWD R K+CMLT +AH SDVNVISWNRTEP
Sbjct: 273 SVEDLQWSPNERSVLASCSVDKTIRIWDCRAAPQKACMLTCQDAHQSDVNVISWNRTEPF 332
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
I SGGDDG +H+WDLR+F+ +ATFKHHT +TTVEW P E++ ASGG DDQIALWD
Sbjct: 333 IASGGDDGYLHIWDLRQFQNKKPIATFKHHTDHITTVEWSPGEATVLASGGDDDQIALWD 392
Query: 441 LAVERDS----EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496
LAVE+D+ + Q E L LP QLLFIH GQKEIKELHWHPQLPG ++STA+SGFNI
Sbjct: 393 LAVEKDNDQAVDTAQNEDVLSKLPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNI 452
Query: 497 FRTIS 501
FRTIS
Sbjct: 453 FRTIS 457
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157136915|ref|XP_001663860.1| wd-repeat protein [Aedes aegypti] gi|108869822|gb|EAT34047.1| AAEL013685-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/457 (51%), Positives = 299/457 (65%), Gaps = 36/457 (7%)
Query: 45 EKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQ 104
+ E +VYLPG L+ E LV D SAYVMLH+A TGAPCLSFD+I D LGD+R +P
Sbjct: 43 DNETGNGQVYLPGRKLNNDEELVCDESAYVMLHQAHTGAPCLSFDLIADPLGDDRETFPL 102
Query: 105 TLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGI 164
T + VAGTQ+ + + N +IVMKMSNL T + ER+ +DD++D + ++ K P +
Sbjct: 103 TAFMVAGTQAARTHVNSVIVMKMSNLHRTSK--ERKDDDDDSDSELSDDEDEHEDKRPHM 160
Query: 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
L +G + A ++ + ++ T E G +
Sbjct: 161 -NCALIKHAGCVNRIRATTFNQSH-------------YVATWSEMGRVNI---------- 196
Query: 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
++ L VDD Q ++ + G G+ P F+FSGH EGFA+DW +T
Sbjct: 197 -------YNINDQLAAVDDE-QSCKNYETNKVGDGVK--PDFTFSGHQKEGFAIDWCTTT 246
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
G+LATGDC+R+IHIW P + G+W VDQ+PL+GHT+SVED+QWSP E VLA+CSVD SI
Sbjct: 247 RGMLATGDCRRDIHIWRPNDKGSWTVDQRPLIGHTDSVEDIQWSPNEANVLATCSVDKSI 306
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
RIWD R +K+CMLT NAH SDVNVISWNR EPLI SGGDDG H+WDLR F+ S+V
Sbjct: 307 RIWDCRAAPSKACMLTAANAHESDVNVISWNRNEPLIASGGDDGFFHIWDLRNFQSKSTV 366
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464
ATFKHHT +TT+EWHP ES+ A+GG DDQIALWDL+VERD E E+ + +LKDLP QLL
Sbjct: 367 ATFKHHTNHITTIEWHPKESTILATGGDDDQIALWDLSVERDDEEERADPQLKDLPPQLL 426
Query: 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
FIH GQ EIKELHWHPQL G + STA+SGFN+ RTIS
Sbjct: 427 FIHQGQTEIKELHWHPQLKGVLFSTAHSGFNVVRTIS 463
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195120556|ref|XP_002004790.1| GI19400 [Drosophila mojavensis] gi|193909858|gb|EDW08725.1| GI19400 [Drosophila mojavensis] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/495 (49%), Positives = 310/495 (62%), Gaps = 63/495 (12%)
Query: 26 DME--QGEESKDKTKPDESKEEKE----KKTRKVYLPGTPLDKGESLVYDPSAYVMLHEA 79
DME + E+++ +PD +E E K ++VYLPG L + E LV D SAYVMLH+A
Sbjct: 9 DMEVVEPEDAESDMEPDSDNDENEDGTPKAPKQVYLPGKTLAEDEELVCDESAYVMLHQA 68
Query: 80 QTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNER 139
TGAPCLSFDI+ DELG R ++P T Y VAGTQ+ + + N LIVMKMSNL T+E ++
Sbjct: 69 STGAPCLSFDIVPDELGASRESFPMTAYIVAGTQAARTHVNNLIVMKMSNLHKTQEGDDD 128
Query: 140 ELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE---------GFAMDWSSTEPG 190
+ +++ D +K K P + T L G + FA WS E G
Sbjct: 129 DDDEELEDDQDDVA-DKSELKKPQM-TCALIKHQGCVNRVRARRMGNNVFAASWS--ELG 184
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
++IW+ L + ED Q L ++
Sbjct: 185 ---------RVNIWS-------------LSQQLQAVEDAQL---------------LKQY 207
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
++ P +++FSGH EGFA+DWS + GVLATGDC+R+IHIW+P E G W+V
Sbjct: 208 EQQSANNETKP---VYTFSGHQQEGFAIDWSPSAEGVLATGDCRRDIHIWSPLEDGTWKV 264
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
DQ+PLVGHT SVEDLQWSP E+ VLASCSVD +IRIWD R K+CMLT NAH SD+N
Sbjct: 265 DQRPLVGHTASVEDLQWSPNERSVLASCSVDKTIRIWDCRAAPQKACMLTCENAHESDIN 324
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
VISWN TEP I SGGDDG +H+WDLR+FK +ATFKHHT +TTVEW+P+E++ ASG
Sbjct: 325 VISWNHTEPFIASGGDDGFLHIWDLRQFKSQKPIATFKHHTDHITTVEWNPSEATVLASG 384
Query: 431 GADDQIALWDLAVERD----SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486
G DDQIALWDLAVE D S + + E+ LP QLLFIH GQKEIKELHWHPQLPG +
Sbjct: 385 GDDDQIALWDLAVETDADQASAPAENQEEINKLPPQLLFIHQGQKEIKELHWHPQLPGVL 444
Query: 487 ISTANSGFNIFRTIS 501
+STA+SGFNIFRTIS
Sbjct: 445 LSTAHSGFNIFRTIS 459
|
Source: Drosophila mojavensis Species: Drosophila mojavensis Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157124910|ref|XP_001660583.1| wd-repeat protein [Aedes aegypti] gi|108873823|gb|EAT38048.1| AAEL010035-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/457 (51%), Positives = 299/457 (65%), Gaps = 36/457 (7%)
Query: 45 EKEKKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQ 104
+ E +VYLPG L+ E LV D SAYVMLH+A TGAPCLSFD+I D LG++R +P
Sbjct: 42 DNETGNGQVYLPGRKLNNDEELVCDESAYVMLHQAHTGAPCLSFDLIPDPLGEDRETFPL 101
Query: 105 TLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGI 164
T + VAGTQ+ + + N +IVMKMSNL T + ER+ +DD++D + ++ K P +
Sbjct: 102 TAFMVAGTQAARTHVNSVIVMKMSNLHRTSK--ERKDDDDDSDSELSDDEDEHEDKRPHM 159
Query: 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
L +G + A ++ + ++ T E G +
Sbjct: 160 -NCALIKHAGCVNRIRATTFNQSH-------------YVATWSEMGRVNI---------- 195
Query: 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
++ L VDD Q ++ + G G+ P F+FSGH EGFA+DW +T
Sbjct: 196 -------YNINDQLAAVDDE-QSCKNYETNKVGDGVK--PDFTFSGHQKEGFAIDWCTTT 245
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
G+LATGDC+R+IHIW P G+W VDQ+PL+GHT+SVED+QWSP E VLA+CSVD SI
Sbjct: 246 RGMLATGDCRRDIHIWRPNGKGSWTVDQRPLIGHTDSVEDIQWSPNEANVLATCSVDKSI 305
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
RIWD R +K+CMLT NAH SDVNVISWNR EPLI SGGDDG H+WDLR F+ S+V
Sbjct: 306 RIWDCRAAPSKACMLTAANAHESDVNVISWNRNEPLIASGGDDGFFHIWDLRNFQSKSTV 365
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464
ATFKHHT +TT+EWHP ES+ A+GG DDQIALWDL+VERD E E+ + +LKDLP QLL
Sbjct: 366 ATFKHHTNHITTIEWHPKESTILATGGDDDQIALWDLSVERDDEEERADPQLKDLPPQLL 425
Query: 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
FIH GQ EIKELHWHPQL G + STA+SGFN+FRTIS
Sbjct: 426 FIHQGQTEIKELHWHPQLKGVLFSTAHSGFNVFRTIS 462
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195580844|ref|XP_002080244.1| GD10383 [Drosophila simulans] gi|194192253|gb|EDX05829.1| GD10383 [Drosophila simulans] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/459 (51%), Positives = 296/459 (64%), Gaps = 46/459 (10%)
Query: 48 KKTRKVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLY 107
K ++VYLPGT L E LV D SAYVMLH+A TGAPCLSFD+I DELG+ R ++P T Y
Sbjct: 38 KVPKEVYLPGTKLADDEELVCDESAYVMLHQASTGAPCLSFDVIPDELGNGRQSFPMTAY 97
Query: 108 AVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTP 167
VAGTQ+ + + N LIVMKMSNL T++++ E E+ E+D +A +++ K P + T
Sbjct: 98 IVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEELEDDQDDVA--DREELKKPQM-TC 154
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
L G + +V + LG NS
Sbjct: 155 ALVKHQGCVN-----------------------------------RVRARRLG---NSVF 176
Query: 228 DLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
WS+L + + + P Q E+ + + P+F+F GH EGFA+DWS + G
Sbjct: 177 AASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADG 236
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
VLATGDC+R+IH+WTP E G W VDQ+PL GH+ SVEDLQWSP E+ VLASCSVD +IRI
Sbjct: 237 VLATGDCRRDIHVWTPAEDGTWTVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRI 296
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD R K+CMLT +AH SDVNVISWNR EP I SGGDDG +H+WDLR+F+ +AT
Sbjct: 297 WDCRAAPQKACMLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIAT 356
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD----SEIEQREAELKDLPSQ 462
FKHHT +TTVEW P+E++ ASGG DDQIALWDLAVE+D + Q E L LP Q
Sbjct: 357 FKHHTDHITTVEWSPSEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQ 416
Query: 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
LLFIH GQKEIKELHWHPQLPG ++STA+SGFNIFRTIS
Sbjct: 417 LLFIHQGQKEIKELHWHPQLPGVVLSTAHSGFNIFRTIS 455
|
Source: Drosophila simulans Species: Drosophila simulans Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|58376463|ref|XP_308636.2| AGAP007125-PA [Anopheles gambiae str. PEST] gi|55245729|gb|EAA04110.2| AGAP007125-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/459 (52%), Positives = 288/459 (62%), Gaps = 53/459 (11%)
Query: 52 KVYLPGTPLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAG 111
KVYLPG L E LV D SAY+MLH+A TGAPCLSFDI+ D LGD+R +P T Y VAG
Sbjct: 43 KVYLPGGKLSNDEELVCDESAYIMLHQAHTGAPCLSFDIVSDPLGDDRETFPLTAYVVAG 102
Query: 112 TQSKKFNFNRLIVMKMSNLTST-------EEDNERELEDDEN-DPFQLAEHNKKRGKGPG 163
TQ+ + + N +IVMKM+NLT T E D++ E+ D E+ + Q K PG
Sbjct: 103 TQAARTHVNSVIVMKMANLTRTSKQSADGESDDDEEVSDSEDVNEDQTPILTSVMIKHPG 162
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
S G + + WS E G +HI+ E
Sbjct: 163 CVNRLRVSTFG--SSQYVASWS--EMG---------KVHIYNINEQ-------------- 195
Query: 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
L +DD + + + G G+ P F+FSGH EGFA+DW T
Sbjct: 196 --------------LAAIDDSRARKTYQQNK-TGDGVK--PDFTFSGHQKEGFAIDWCPT 238
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
G+LATGDC+R+IHIW P + GAW VDQ+PLVGHT+SVED+QWSP E VLASCSVD S
Sbjct: 239 TRGMLATGDCRRDIHIWRPNDKGAWIVDQRPLVGHTDSVEDIQWSPNEANVLASCSVDKS 298
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
IRIWD R K+CMLT NAH SDVNVISWNR EPLI SGGDDG + +WDLR+F+ +
Sbjct: 299 IRIWDCRAAPAKACMLTAENAHESDVNVISWNRNEPLIASGGDDGVLQIWDLRQFQSKTP 358
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA-ELKDLPSQ 462
VATFKHHT +TTVEWHP ES+ ASGG DDQIALWDL+VE+D + + LKDLP Q
Sbjct: 359 VATFKHHTDHITTVEWHPKESTILASGGDDDQIALWDLSVEKDDGDDANDDPNLKDLPPQ 418
Query: 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
LLFIH GQ EIKELHWHPQL G I+STA+SGFN+FRTIS
Sbjct: 419 LLFIHQGQSEIKELHWHPQLKGVILSTAHSGFNVFRTIS 457
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 812 | ||||||
| FB|FBgn0022288 | 456 | l(2)09851 "lethal (2) 09851" [ | 0.342 | 0.609 | 0.604 | 1.8e-118 | |
| UNIPROTKB|F1RL85 | 445 | GRWD1 "Uncharacterized protein | 0.352 | 0.642 | 0.573 | 4.2e-115 | |
| UNIPROTKB|Q1JQD2 | 446 | GRWD1 "Glutamate-rich WD repea | 0.352 | 0.641 | 0.563 | 4.8e-114 | |
| MGI|MGI:2141989 | 446 | Grwd1 "glutamate-rich WD repea | 0.352 | 0.641 | 0.576 | 6.1e-114 | |
| UNIPROTKB|E2RBY0 | 440 | GRWD1 "Uncharacterized protein | 0.352 | 0.65 | 0.552 | 5.5e-113 | |
| RGD|1310649 | 445 | Grwd1 "glutamate-rich WD repea | 0.352 | 0.642 | 0.573 | 4.3e-92 | |
| UNIPROTKB|Q9BQ67 | 446 | GRWD1 "Glutamate-rich WD repea | 0.352 | 0.641 | 0.566 | 7e-92 | |
| ZFIN|ZDB-GENE-030131-9844 | 452 | grwd1 "glutamate-rich WD repea | 0.321 | 0.577 | 0.579 | 1.2e-83 | |
| TAIR|locus:2050388 | 469 | AT2G19540 "AT2G19540" [Arabido | 0.315 | 0.545 | 0.494 | 8.3e-83 | |
| ASPGD|ASPL0000069856 | 492 | AN7205 [Emericella nidulans (t | 0.295 | 0.487 | 0.447 | 2.3e-74 |
| FB|FBgn0022288 l(2)09851 "lethal (2) 09851" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 918 (328.2 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 171/283 (60%), Positives = 207/283 (73%)
Query: 224 NSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
NS WS+L + + + P Q E+ + + P+F+F GH EGFA+DWS
Sbjct: 173 NSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSP 232
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
+ GVLATGDC+R+IH+WTP E G W+VDQ+PL GH+ SVEDLQWSP E+ VLASCSVD
Sbjct: 233 SADGVLATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDK 292
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+IRIWD R K+CMLT +AH SDVNVISWNR EP I SGGDDG +H+WDLR+F+
Sbjct: 293 TIRIWDCRASPQKACMLTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKK 352
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE--IE--QREAELKD 458
+ATFKHHT +TTVEW P E++ ASGG DDQIALWDLAVE+D + ++ Q E L
Sbjct: 353 PIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNK 412
Query: 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
LP QLLFIH GQKEIKELHWHPQLPG ++STA+SGFNIFRTIS
Sbjct: 413 LPPQLLFIHQGQKEIKELHWHPQLPGVLLSTAHSGFNIFRTIS 455
|
|
| UNIPROTKB|F1RL85 GRWD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 907 (324.3 bits), Expect = 4.2e-115, Sum P(2) = 4.2e-115
Identities = 168/293 (57%), Positives = 209/293 (71%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+F+FSG
Sbjct: 157 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATF--LRDEQARVK--PIFAFSG 211
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP ++G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVEDLQWSPT 271
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT P AH DVNVISW+R EP ++SGGDDG +
Sbjct: 272 EDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFLLSGGDDGAL 331
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 332 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 391
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L LP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 392 DTETDPGLVGLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 444
|
|
| UNIPROTKB|Q1JQD2 GRWD1 "Glutamate-rich WD repeat-containing protein 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 897 (320.8 bits), Expect = 4.8e-114, Sum P(2) = 4.8e-114
Identities = 165/293 (56%), Positives = 205/293 (69%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA + P+F+FSG
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQTR----MKPIFAFSG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT AH DVNVI+W+ EP ++SGGDDG +
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 333 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 393 DAETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 445
|
|
| MGI|MGI:2141989 Grwd1 "glutamate-rich WD repeat containing 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 898 (321.2 bits), Expect = 6.1e-114, Sum P(2) = 6.1e-114
Identities = 169/293 (57%), Positives = 207/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + I P+FSF+G
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIF--LRDEQARIK--PIFSFAG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++N+H+WTP E G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 273 EDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 333 KVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ E + L LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 393 ETETDPGLAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 445
|
|
| UNIPROTKB|E2RBY0 GRWD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 889 (318.0 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 162/293 (55%), Positives = 208/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+F+F+G
Sbjct: 152 SW-LGEEPVAGIWSEKGQVEVFALRRLLQVVDDPQALATF--LRDEQARVK--PIFTFAG 206
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P +GHT SVEDLQWSP
Sbjct: 207 HMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPT 266
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT +AH DVNVI+W+R EP ++SGGDDG +
Sbjct: 267 EDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFLLSGGDDGAL 326
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WDLR+FK GS VATFK H AP+T+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 327 KIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLAVERDPEAG 386
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
E + L DLP QLLF+H G+ ++KELHWHPQ PG ++STA SGF +FRTIS
Sbjct: 387 DTETDPGLADLPQQLLFVHQGETDLKELHWHPQCPGVLVSTALSGFTVFRTIS 439
|
|
| RGD|1310649 Grwd1 "glutamate-rich WD repeat containing 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 4.3e-92, Sum P(2) = 4.3e-92
Identities = 168/293 (57%), Positives = 207/293 (70%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ VDDP LA R + + P+FSF+G
Sbjct: 157 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIF--LRDEQARVK--PIFSFAG 211
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS PG L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPFVGHTRSVEDLQWSPT 271
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 272 EDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLSGGDDGTL 331
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
VWDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD+QI WDLAVERD E
Sbjct: 332 KVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVERDPESG 391
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
+ E + L LP QLLF+H G+ ++KELHWHPQ PG +ISTA SGF +FRTIS
Sbjct: 392 ETETDPGLAALPQQLLFVHQGETDLKELHWHPQCPGVLISTALSGFTVFRTIS 444
|
|
| UNIPROTKB|Q9BQ67 GRWD1 "Glutamate-rich WD repeat-containing protein 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 7.0e-92, Sum P(2) = 7.0e-92
Identities = 166/293 (56%), Positives = 205/293 (69%)
Query: 211 AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270
+W + ++P+ G + ++ L+ LQ V++P LA + P+FSF+G
Sbjct: 158 SW-LGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQA----QMKPIFSFAG 212
Query: 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
H+ EGFA+DWS G L TGDC++NIH+WTP + G+W VDQ+P VGHT SVEDLQWSP
Sbjct: 213 HMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPT 272
Query: 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
E V ASCS D SIRIWD R +K+CMLT AH DVNVISW+R EP ++SGGDDG +
Sbjct: 273 ENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDDGAL 332
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450
+WDLR+FK GS VATFK H APVT+VEWHP +S FA+ GAD QI WDLAVERD E
Sbjct: 333 KIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAG 392
Query: 451 QREAE--LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501
EA+ L DLP QLLF+H G+ E+KELHWHPQ PG ++STA SGF IFRTIS
Sbjct: 393 DVEADPGLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALSGFTIFRTIS 445
|
|
| ZFIN|ZDB-GENE-030131-9844 grwd1 "glutamate-rich WD repeat containing 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 156/269 (57%), Positives = 197/269 (73%)
Query: 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292
DL+ L+ V + ++ K+ + PLFSF+GH++EGFA+DWS PG + +GD
Sbjct: 191 DLRLQLEAVHNSTAMSAFIKQEKEAT-----PLFSFAGHMSEGFAIDWSPKVPGRMVSGD 245
Query: 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
CK+NIH+W P+E G W++DQ+P H+ SVEDLQWSP E V ASCSVD SIRIWD R
Sbjct: 246 CKKNIHVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRA- 304
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
+ ML+ AH+SDVNVISWNRTEP I+SGGDDG + VWDLR+F+ G VA+FK H+A
Sbjct: 305 -PPNSMLSANEAHSSDVNVISWNRTEPFILSGGDDGLLKVWDLRQFQSGRPVASFKQHSA 363
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE 472
PVT+V+W P +SS FA+ GADD I+ WDL+VE Q E ++K LP QLLF+H GQKE
Sbjct: 364 PVTSVQWSPVDSSVFAASGADDVISQWDLSVESCDMGGQAE-DVKQLPPQLLFLHQGQKE 422
Query: 473 IKELHWHPQLPGTIISTANSGFNIFRTIS 501
+KELHWHPQ+PG +ISTA SGFNIFRTIS
Sbjct: 423 VKELHWHPQIPGVLISTALSGFNIFRTIS 451
|
|
| TAIR|locus:2050388 AT2G19540 "AT2G19540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 657 (236.3 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 135/273 (49%), Positives = 174/273 (63%)
Query: 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307
+E K G P + PL +FSGH EG+A+DWS G L +GDCK IH+W P +G+
Sbjct: 199 SETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPA-SGS 257
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
W VD P GHT SVEDLQWSP E+ V ASCSVD S+ +WD R+ KS L+ AH +
Sbjct: 258 WAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRL--GKSPALSF-KAHNA 314
Query: 368 DVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPTESS 425
DVNVISWNR ++ SG DDG + DLR K G +V A F++H P+T++EW E+S
Sbjct: 315 DVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEAS 374
Query: 426 TFASGGADDQIALWDLAVERDSEIEQR-EAELK-------DLPSQLLFIHLGQKEIKELH 477
T A D+Q+ +WDL++E+D E E A+ K DLP QLLF+H GQK++KELH
Sbjct: 375 TLAVTSGDNQLTIWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQKDLKELH 434
Query: 478 WHPQLPGTIISTANSGFNI---FRTISDLPSQL 507
WH Q+PG IISTA GFNI + + LPS+L
Sbjct: 435 WHNQIPGMIISTAGDGFNILMPYNIQNTLPSEL 467
|
|
| ASPGD|ASPL0000069856 AN7205 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 568 (205.0 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 114/255 (44%), Positives = 160/255 (62%)
Query: 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316
P + PL + H +EG+A+DWS P G L TGD I++ T E G W D +
Sbjct: 241 PPSASKPLSTLRMHKSEGYALDWSPLHPLGKLLTGDNDGLIYVTTRTEGGGWVTDTRAFR 300
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
GH +SVE+LQWSP EK V AS S D ++++WD R ++S + + ++T DVNV++W++
Sbjct: 301 GHASSVEELQWSPNEKNVFASASSDGTVKVWDVRS-KSRSPAVNVKISNT-DVNVMTWSK 358
Query: 377 -TEPLIVSGGDDGCIHVWDLRRFKKGSS---------VATFKHHTAPVTTVEWHPTESST 426
T L+ +G DDG VWDLR +K S VA+F H P+T++EWHPT+ S
Sbjct: 359 QTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSV 418
Query: 427 FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486
A G AD+ + LWDLAVE D E E REA L D+P QLLF+H + +KE+HW Q+PGT+
Sbjct: 419 IAVGSADNTVTLWDLAVELDEE-ESREAGLADVPPQLLFVHY-MESVKEVHWQAQMPGTL 476
Query: 487 ISTANSGFNIFRTIS 501
++T + GF +F+TIS
Sbjct: 477 MATGSGGFGVFKTIS 491
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q810D6 | GRWD1_MOUSE | No assigned EC number | 0.5733 | 0.3460 | 0.6300 | yes | N/A |
| Q9BQ67 | GRWD1_HUMAN | No assigned EC number | 0.5689 | 0.3497 | 0.6367 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 812 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-27 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-23 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-20 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-19 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-18 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-18 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-14 | |
| pfam12265 | 73 | pfam12265, CAF1C_H4-bd, Histone-binding protein RB | 1e-13 | |
| PTZ00420 | 568 | PTZ00420, PTZ00420, coronin; Provisional | 6e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 3e-10 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-06 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-06 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 3e-06 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-06 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-05 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 5e-05 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 9e-05 | |
| PTZ00421 | 493 | PTZ00421, PTZ00421, coronin; Provisional | 0.001 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 1e-27
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT+ V + +SP + R+L+S S D +I++WD T C+ TL HT VN +++
Sbjct: 89 LTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVE---TGKCLTTL-RGHTDWVNSVAF 143
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ + S DG I +WDLR G VAT HT V +V + P S +D
Sbjct: 144 SPDGTFVASSSQDGTIKLWDLR---TGKCVATLTGHTGEVNSVAFSPDGEK-LLSSSSDG 199
Query: 435 QIALWDLA 442
I LWDL+
Sbjct: 200 TIKLWDLS 207
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 3e-23
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 264 PLFSFSGHLTEGFAMDWS-STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
L + GH + + S + +A+ I +W R L GHT V
Sbjct: 127 CLTTLRGH--TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVAT----LTGHTGEV 180
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
+ +SP ++ L S S D +I++WD T C+ TL H + VN ++++ L+
Sbjct: 181 NSVAFSPDGEK-LLSSSSDGTIKLWDLS---TGKCLGTLR-GHENGVNSVAFSPDGYLLA 235
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
SG +DG I VWDLR G V T HT VT++ W P ASG AD I +WD
Sbjct: 236 SGSEDGTIRVWDLR---TGECVQTLSGHTNSVTSLAWSPD-GKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 92.8 bits (229), Expect = 9e-20
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 22/278 (7%)
Query: 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT 223
PL + +GH ++ +S ++A+G I +W ++ + L GH+
Sbjct: 186 RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS---TGKLLRSTLSGHS 242
Query: 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 283
+S +S + L + + + + L + SGH + ++ +S
Sbjct: 243 DSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSS------SLLRTLSGHSSSVLSVAFSP- 294
Query: 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+ +LA+G + +W + L GH V L +SP +++ S D +
Sbjct: 295 DGKLLASGSSDGTVRLWDLETGK--LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGT 352
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
IR+WD + T + TL S+V +S++ ++ SG DG + +WDL GS
Sbjct: 353 IRLWD---LRTGKPLKTLE--GHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLST---GSL 404
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ HT+ VT++++ P S ASG +D+ I LWDL
Sbjct: 405 LRNLDGHTSRVTSLDFSPDGKS-LASGSSDNTIRLWDL 441
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GHT V + +SP + ++LA+ S D +I++WD T + TL HT V ++
Sbjct: 5 LKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDL---ETGELLRTLKG-HTGPVRDVAA 59
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ + SG D I +WDL + G V T HT+ V++V + P +S D
Sbjct: 60 SADGTYLASGSSDKTIRLWDL---ETGECVRTLTGHTSYVSSVAFSPD-GRILSSSSRDK 115
Query: 435 QIALWDLA 442
I +WD+
Sbjct: 116 TIKVWDVE 123
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 2e-18
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+ + +GH + ++ +S +L++ + I +W L GHT+
Sbjct: 85 CVRTLTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVETGKC----LTTLRGHTDWVN 139
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
+ +S T + + + + + GK + + +GH E ++ +S +
Sbjct: 140 SVAFSPDGTFVASSSQDGTIKLWDLRTGK-------CVATLTGHTGEVNSVAFSPDGEKL 192
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L++ I +W G L GH N V + +SP +LAS S D +IR+W
Sbjct: 193 LSSSS-DGTIKLWDLS-TGKCL---GTLRGHENGVNSVAFSPD-GYLLASGSEDGTIRVW 246
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
D R T C+ TL HT+ V ++W+ + SG DG I +WD
Sbjct: 247 DLR---TGECVQTLS-GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.6 bits (218), Expect = 2e-18
Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 25/282 (8%)
Query: 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG 221
P + + GH ++ +S + + I +W R L G
Sbjct: 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT----GKPLSTLAG 196
Query: 222 HTNSAEDLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 280
HT+ L +S D + + + + GK + SGH ++ +
Sbjct: 197 HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGK------LLRSTLSGH-SDSVVSSF 249
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
S +LA+G I +W R + + L GH++SV + +SP K +LAS S
Sbjct: 250 SPDGS-LLASGSSDGTIRLWDLR---SSSSLLRTLSGHSSSVLSVAFSPDGK-LLASGSS 304
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFK 399
D ++R+WD K H V+ +S++ L+VSGG DDG I +WDLR
Sbjct: 305 DGTVRLWDLE--TGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLR--- 359
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
G + T + H+ V +V + P +SG D + LWDL
Sbjct: 360 TGKPLKTLEGHS-NVLSVSFSPDG-RVVSSGSTDGTVRLWDL 399
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 77.1 bits (188), Expect = 1e-14
Identities = 73/399 (18%), Positives = 137/399 (34%), Gaps = 59/399 (14%)
Query: 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294
+ L + +P GH ++ +S +L +G
Sbjct: 28 LSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGE-LLLSGSSD 86
Query: 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW-SPGEKRVLASCS-VDLSIRIWDTRVI 352
I +W + L H +SV L SP +L + S +D ++++WD +
Sbjct: 87 GTIKLWDLDNGEKLIKSLEGL--HDSSVSKLALSSPDGNSILLASSSLDGTVKLWD---L 141
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHT 411
+T ++ H+ V ++++ L+ SG DG I +WDLR G ++T HT
Sbjct: 142 STPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR---TGKPLSTLAGHT 198
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK 471
PV+++ + P ASG +D I LWDL+ L L H
Sbjct: 199 DPVSSLAFSPDGGLLIASGSSDGTIRLWDLST-------------GKLLRSTLSGHSDSV 245
Query: 472 EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531
+ L + S ++ G + S L + + + + P +
Sbjct: 246 -VSSFSPDGSL---LASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD-GKLLA 300
Query: 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCIN 591
S ++ G T+ + +L + + + H G ++
Sbjct: 301 SGSSDG-----TVRLWDLET-----------------------GKLLSSLTLKGHEGPVS 332
Query: 592 RVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQ 630
+ GS ++G + G + +WDL+T
Sbjct: 333 SLSFSPDGSLLVSGGSDD-GTIRLWDLRTGKPLKTLEGH 370
|
Length = 466 |
| >gnl|CDD|221499 pfam12265, CAF1C_H4-bd, Histone-binding protein RBBP4 or subunit C of CAF1 complex | Back alignment and domain information |
|---|
Score = 66.1 bits (162), Expect = 1e-13
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 67 VYDPSAYVMLHEAQTGAPCLSFDIIKDEL-GDERTAYPQTLYAVAGTQSKKFNFNRLIVM 125
DP Y MLH P LSFD + D L GD R YP T + GTQ+ N L+V
Sbjct: 9 KNDPFLYDMLHTHALEWPSLSFDWLPDLLKGDNR--YPHTQRLLLGTQTSGQEQNYLLVA 66
Query: 126 KMSNLT 131
K+S +
Sbjct: 67 KVSLPS 72
|
The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six. Length = 73 |
| >gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 6e-11
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 309 QVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR-------VINTKSCM 358
Q+ + P++ GHT+S+ DLQ++P +LAS S DL+IR+W+ I C+
Sbjct: 61 QMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCI 120
Query: 359 LTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKK 400
L H +++I WN I+ S G D +++WD+ K+
Sbjct: 121 L---KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKR 160
|
Length = 568 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.8 bits (151), Expect = 3e-10
Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 20/242 (8%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
+ SGH ++ +S +LA+G I +W R + + L GH++S +
Sbjct: 237 TLSGH-SDSVVSSFSPDGS-LLASGSSDGTIRLWDLR---SSSSLLRTLSGHSSSVLSVA 291
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
+S L + + + + GK + GH ++ +S +++
Sbjct: 292 FSPDGKLLASGSSDGTVRLWDLETGK-----LLSSLTLKGHEGPVSSLSFSPDGSLLVSG 346
Query: 291 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350
G I +W R + ++V + +SP RV++S S D ++R+WD
Sbjct: 347 GSDDGTIRLWDLRTGKPLKTL-----EGHSNVLSVSFSPDG-RVVSSGSTDGTVRLWDLS 400
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410
+L + HTS V + ++ + SG D I +WDL+ K S +
Sbjct: 401 ----TGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKV 456
Query: 411 TA 412
A
Sbjct: 457 LA 458
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 78/372 (20%), Positives = 130/372 (34%), Gaps = 97/372 (26%)
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ 462
T K HT VT V + P + A+G D I +WDL E + LK
Sbjct: 1 LRRTLKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDL------ETGELLRTLK----- 48
Query: 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQLLFIHLGQKEIKELH 521
H G ++++ + S ++ ++ + + L H + +
Sbjct: 49 ---GHTG--PVRDVAASADGT-YLASGSSDKTIRLWDLETGECVRTLTGH--TSYVSSVA 100
Query: 522 WHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581
+ P G I+S+++ +TI + ++ + + L
Sbjct: 101 FSPD--GRILSSSSRD----KTIKVWDVETGKC--LTTLRG------------------- 133
Query: 582 YFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641
H +N V G T +A + G + +WDL+T
Sbjct: 134 ----HTDWVNSVAFSPDG-TFVASSSQD-GTIKLWDLRTG-------------------- 167
Query: 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-----------EAG 690
+ + +GH E ++ +S +L++ I +W E G
Sbjct: 168 -----KCVATLTGHTGEVNSVAFSPDGEKLLSSSS-DGTIKLWDLSTGKCLGTLRGHENG 221
Query: 691 AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 750
SV + +LA+G I +W + + Q L GHTNSV L WSP KR
Sbjct: 222 VNSVAFSPDG-YLLASGSEDGTIRVW---DLRTGECVQT-LSGHTNSVTSLAWSPDGKR- 275
Query: 751 LASCSVDRSNRI 762
LAS S D + RI
Sbjct: 276 LASGSADGTIRI 287
|
Length = 289 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-06
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
G + T K HT PVT+V + P + ASG D + +WD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPD-GNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-06
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
G + T K HT PVT+V + P ASG D I LWD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPD-GKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 3e-06
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+ TL HT V ++++ L+ SG DDG + VWD
Sbjct: 1 GKLLRTL-KGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-06
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+ + TL HT V ++++ + SG DDG I +WD
Sbjct: 1 SGELLKTL-KGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.8 bits (112), Expect = 2e-05
Identities = 67/417 (16%), Positives = 123/417 (29%), Gaps = 96/417 (23%)
Query: 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
P+ ++ + + + + L+++ D + + DL + H +T++ +
Sbjct: 21 LGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSS-------LLLRGHEDSITSIAF 73
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479
P SG +D I LWDL + E +K L K
Sbjct: 74 SPD-GELLLSGSSDGTIKLWDL--------DNGEKLIKSLEG-----LHDSSVSKLALSS 119
Query: 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIH---LGQKEIKELHWHPQLPGTIISTANS 536
P G I A+S + + DL + I + + L + P ++
Sbjct: 120 PD--GNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLD 177
Query: 537 GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC 596
G + ST H ++ +
Sbjct: 178 GTIKLWDLRTGKPLSTLAG------------------------------HTDPVSSLAFS 207
Query: 597 QYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 656
G +A G + +WDL T + SGH
Sbjct: 208 PDGGLLIASG-SSDGTIRLWDLSTGKLLRS------------------------TLSGH- 241
Query: 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV-----------LA 705
++ +S +LA+G I +W R + + L + V LA
Sbjct: 242 SDSVVSSFSPDGS-LLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLA 300
Query: 706 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+G + +W + L GH V L +SP +++ S D + R+
Sbjct: 301 SGSSDGTVRLWDLETGK--LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRL 355
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.4 bits (111), Expect = 2e-05
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 15/151 (9%)
Query: 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703
PL + +GH ++ +S ++A+G I +W L + V
Sbjct: 186 RTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV 245
Query: 704 ----------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753
LA+G I +W R + + L GH++SV + +SP K +LAS
Sbjct: 246 VSSFSPDGSLLASGSSDGTIRLWDLR---SSSSLLRTLSGHSSSVLSVAFSPDGK-LLAS 301
Query: 754 CSVDRSNRIG-ARRDMLYCFFVSLVHCIFVW 783
S D + R+ L H V
Sbjct: 302 GSSDGTVRLWDLETGKLLSSLTLKGHEGPVS 332
|
Length = 466 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-05
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
L GHT V + +SP K LAS S D +I++WD
Sbjct: 8 LKGHTGPVTSVAFSPDGKY-LASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 9e-05
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
L GHT V + +SP + +LAS S D ++R+WD
Sbjct: 7 LKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 0.001
Identities = 37/147 (25%), Positives = 56/147 (38%), Gaps = 12/147 (8%)
Query: 300 WTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
W E G Q P+V GHT V + + P VLAS D+ + +WD +
Sbjct: 103 WGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWD---VERGK 159
Query: 357 CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416
+ + H+ + + WN L+ + D +++ D R SSV H +A
Sbjct: 160 AVEVIKC-HSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEA--HASAKSQR 216
Query: 417 VEWHPTESSTFASG---GADDQIALWD 440
W + G QI LWD
Sbjct: 217 CLWAKRKDLIITLGCSKSQQRQIMLWD 243
|
Length = 493 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 812 | |||
| KOG0302|consensus | 440 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0264|consensus | 422 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG2048|consensus | 691 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0266|consensus | 456 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0277|consensus | 311 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0299|consensus | 479 | 99.98 | ||
| KOG0310|consensus | 487 | 99.97 | ||
| KOG0643|consensus | 327 | 99.97 | ||
| KOG0316|consensus | 307 | 99.97 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0640|consensus | 430 | 99.97 | ||
| KOG0278|consensus | 334 | 99.97 | ||
| KOG1445|consensus | 1012 | 99.97 | ||
| KOG0308|consensus | 735 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG0640|consensus | 430 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| KOG0305|consensus | 484 | 99.96 | ||
| KOG0268|consensus | 433 | 99.96 | ||
| KOG0275|consensus | 508 | 99.96 | ||
| KOG0300|consensus | 481 | 99.96 | ||
| KOG0288|consensus | 459 | 99.96 | ||
| KOG0300|consensus | 481 | 99.96 | ||
| KOG1407|consensus | 313 | 99.96 | ||
| KOG1407|consensus | 313 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG1332|consensus | 299 | 99.96 | ||
| KOG0973|consensus | 942 | 99.96 | ||
| KOG2048|consensus | 691 | 99.96 | ||
| KOG1446|consensus | 311 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG0283|consensus | 712 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| KOG0647|consensus | 347 | 99.96 | ||
| KOG0278|consensus | 334 | 99.96 | ||
| KOG0288|consensus | 459 | 99.95 | ||
| KOG0305|consensus | 484 | 99.95 | ||
| KOG0643|consensus | 327 | 99.95 | ||
| KOG1445|consensus | 1012 | 99.95 | ||
| KOG0973|consensus | 942 | 99.95 | ||
| KOG1446|consensus | 311 | 99.95 | ||
| KOG2055|consensus | 514 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| KOG0641|consensus | 350 | 99.95 | ||
| KOG0289|consensus | 506 | 99.95 | ||
| KOG1332|consensus | 299 | 99.95 | ||
| KOG0274|consensus | 537 | 99.95 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| KOG0308|consensus | 735 | 99.95 | ||
| KOG0269|consensus | 839 | 99.95 | ||
| KOG0302|consensus | 440 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.94 | |
| KOG0299|consensus | 479 | 99.94 | ||
| KOG0283|consensus | 712 | 99.94 | ||
| KOG0270|consensus | 463 | 99.94 | ||
| KOG0301|consensus | 745 | 99.94 | ||
| KOG0289|consensus | 506 | 99.94 | ||
| KOG1007|consensus | 370 | 99.94 | ||
| KOG2096|consensus | 420 | 99.94 | ||
| KOG0301|consensus | 745 | 99.94 | ||
| KOG4283|consensus | 397 | 99.94 | ||
| KOG0647|consensus | 347 | 99.94 | ||
| KOG0270|consensus | 463 | 99.94 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG0290|consensus | 364 | 99.93 | ||
| KOG0269|consensus | 839 | 99.93 | ||
| KOG1036|consensus | 323 | 99.93 | ||
| KOG1036|consensus | 323 | 99.92 | ||
| KOG2096|consensus | 420 | 99.92 | ||
| KOG2445|consensus | 361 | 99.92 | ||
| KOG1963|consensus | 792 | 99.92 | ||
| KOG4328|consensus | 498 | 99.92 | ||
| KOG0267|consensus | 825 | 99.92 | ||
| KOG0321|consensus | 720 | 99.92 | ||
| KOG0294|consensus | 362 | 99.92 | ||
| KOG0639|consensus | 705 | 99.92 | ||
| KOG0321|consensus | 720 | 99.91 | ||
| KOG1273|consensus | 405 | 99.91 | ||
| KOG1274|consensus | 933 | 99.91 | ||
| KOG0646|consensus | 476 | 99.91 | ||
| KOG1273|consensus | 405 | 99.91 | ||
| KOG4283|consensus | 397 | 99.91 | ||
| KOG1007|consensus | 370 | 99.91 | ||
| KOG0646|consensus | 476 | 99.9 | ||
| KOG0267|consensus | 825 | 99.9 | ||
| KOG0307|consensus | 1049 | 99.9 | ||
| KOG0650|consensus | 733 | 99.9 | ||
| KOG4328|consensus | 498 | 99.89 | ||
| KOG2055|consensus | 514 | 99.89 | ||
| KOG2445|consensus | 361 | 99.89 | ||
| KOG0650|consensus | 733 | 99.89 | ||
| KOG0307|consensus | 1049 | 99.89 | ||
| KOG4378|consensus | 673 | 99.89 | ||
| KOG4378|consensus | 673 | 99.88 | ||
| KOG1310|consensus | 758 | 99.88 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.88 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.88 | |
| KOG1034|consensus | 385 | 99.88 | ||
| KOG1538|consensus | 1081 | 99.87 | ||
| KOG1274|consensus | 933 | 99.87 | ||
| KOG1034|consensus | 385 | 99.86 | ||
| KOG1538|consensus | 1081 | 99.86 | ||
| KOG2919|consensus | 406 | 99.86 | ||
| KOG1963|consensus | 792 | 99.86 | ||
| KOG1009|consensus | 434 | 99.85 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.85 | |
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.85 | |
| KOG1188|consensus | 376 | 99.85 | ||
| KOG2919|consensus | 406 | 99.85 | ||
| KOG4227|consensus | 609 | 99.85 | ||
| KOG1009|consensus | 434 | 99.84 | ||
| KOG0322|consensus | 323 | 99.84 | ||
| KOG0303|consensus | 472 | 99.84 | ||
| KOG0290|consensus | 364 | 99.83 | ||
| KOG1524|consensus | 737 | 99.83 | ||
| KOG0644|consensus | 1113 | 99.83 | ||
| KOG1587|consensus | 555 | 99.82 | ||
| KOG1188|consensus | 376 | 99.82 | ||
| KOG1587|consensus | 555 | 99.82 | ||
| KOG1523|consensus | 361 | 99.82 | ||
| KOG0642|consensus | 577 | 99.82 | ||
| KOG0322|consensus | 323 | 99.82 | ||
| KOG4227|consensus | 609 | 99.8 | ||
| KOG1523|consensus | 361 | 99.8 | ||
| KOG1310|consensus | 758 | 99.8 | ||
| KOG4497|consensus | 447 | 99.79 | ||
| KOG1334|consensus | 559 | 99.79 | ||
| KOG0303|consensus | 472 | 99.78 | ||
| KOG1240|consensus | 1431 | 99.77 | ||
| KOG0644|consensus | 1113 | 99.77 | ||
| KOG1524|consensus | 737 | 99.76 | ||
| KOG1517|consensus | 1387 | 99.76 | ||
| KOG0649|consensus | 325 | 99.75 | ||
| KOG4497|consensus | 447 | 99.75 | ||
| KOG1334|consensus | 559 | 99.74 | ||
| KOG1517|consensus | 1387 | 99.74 | ||
| KOG0642|consensus | 577 | 99.74 | ||
| KOG1240|consensus | 1431 | 99.72 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.67 | |
| PF12265 | 74 | CAF1C_H4-bd: Histone-binding protein RBBP4 or subu | 99.67 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.66 | |
| KOG0771|consensus | 398 | 99.65 | ||
| KOG0649|consensus | 325 | 99.64 | ||
| KOG1272|consensus | 545 | 99.64 | ||
| KOG2041|consensus | 1189 | 99.64 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.63 | |
| KOG2321|consensus | 703 | 99.63 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.62 | |
| KOG0771|consensus | 398 | 99.62 | ||
| KOG2139|consensus | 445 | 99.61 | ||
| KOG2139|consensus | 445 | 99.6 | ||
| KOG3881|consensus | 412 | 99.6 | ||
| KOG1272|consensus | 545 | 99.58 | ||
| KOG1409|consensus | 404 | 99.58 | ||
| KOG2110|consensus | 391 | 99.58 | ||
| KOG1354|consensus | 433 | 99.57 | ||
| KOG2394|consensus | 636 | 99.56 | ||
| KOG1912|consensus | 1062 | 99.56 | ||
| KOG2394|consensus | 636 | 99.56 | ||
| KOG0974|consensus | 967 | 99.55 | ||
| KOG2111|consensus | 346 | 99.53 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.53 | |
| KOG2110|consensus | 391 | 99.53 | ||
| KOG1912|consensus | 1062 | 99.53 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.53 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.51 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.5 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.5 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.5 | |
| KOG0974|consensus | 967 | 99.49 | ||
| KOG2111|consensus | 346 | 99.48 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.47 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.47 | |
| KOG1354|consensus | 433 | 99.47 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.45 | |
| KOG2315|consensus | 566 | 99.45 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.44 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.43 | |
| KOG0280|consensus | 339 | 99.42 | ||
| KOG2321|consensus | 703 | 99.39 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.38 | |
| KOG2041|consensus | 1189 | 99.36 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.36 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.34 | |
| KOG0280|consensus | 339 | 99.34 | ||
| KOG2315|consensus | 566 | 99.33 | ||
| KOG3881|consensus | 412 | 99.33 | ||
| KOG1409|consensus | 404 | 99.33 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.32 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.31 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.31 | |
| KOG0309|consensus | 1081 | 99.3 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.29 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.29 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.29 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.29 | |
| KOG0309|consensus | 1081 | 99.29 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.26 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.26 | |
| KOG1064|consensus | 2439 | 99.25 | ||
| KOG2314|consensus | 698 | 99.25 | ||
| KOG4547|consensus | 541 | 99.24 | ||
| KOG1064|consensus | 2439 | 99.24 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.22 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.22 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.2 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.2 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.2 | |
| KOG4547|consensus | 541 | 99.16 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.13 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.11 | |
| KOG2314|consensus | 698 | 99.1 | ||
| KOG4532|consensus | 344 | 99.1 | ||
| KOG4190|consensus | 1034 | 99.09 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.99 | |
| KOG4532|consensus | 344 | 98.96 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.96 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.96 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.92 | |
| KOG4714|consensus | 319 | 98.9 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.88 | |
| KOG2695|consensus | 425 | 98.85 | ||
| KOG3914|consensus | 390 | 98.84 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.8 | |
| KOG3914|consensus | 390 | 98.8 | ||
| KOG4714|consensus | 319 | 98.79 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 98.79 | |
| KOG4190|consensus | 1034 | 98.77 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.73 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.72 | |
| KOG1920|consensus | 1265 | 98.69 | ||
| KOG1832|consensus | 1516 | 98.68 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.68 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.65 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.55 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.53 | |
| KOG1645|consensus | 463 | 98.53 | ||
| KOG3617|consensus | 1416 | 98.52 | ||
| KOG1008|consensus | 783 | 98.5 | ||
| KOG2695|consensus | 425 | 98.48 | ||
| KOG1645|consensus | 463 | 98.48 | ||
| KOG3617|consensus | 1416 | 98.47 | ||
| KOG2066|consensus | 846 | 98.44 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 98.43 | |
| KOG1275|consensus | 1118 | 98.43 | ||
| KOG2114|consensus | 933 | 98.42 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.41 | |
| KOG1832|consensus | 1516 | 98.4 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.37 | |
| KOG3621|consensus | 726 | 98.32 | ||
| KOG0882|consensus | 558 | 98.28 | ||
| KOG1275|consensus | 1118 | 98.26 | ||
| KOG2066|consensus | 846 | 98.25 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.25 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.24 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.22 | |
| KOG1008|consensus | 783 | 98.2 | ||
| KOG0882|consensus | 558 | 98.2 | ||
| KOG1920|consensus | 1265 | 98.17 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 98.16 | |
| KOG2114|consensus | 933 | 98.13 | ||
| KOG3621|consensus | 726 | 98.0 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.0 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.99 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.96 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.93 | |
| KOG4649|consensus | 354 | 97.9 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 97.84 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.79 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.75 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.71 | |
| KOG2395|consensus | 644 | 97.68 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 97.66 | |
| KOG4649|consensus | 354 | 97.62 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.54 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.5 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.5 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 97.5 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 97.49 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.34 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.33 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 97.31 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.2 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.19 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.17 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 97.14 | |
| KOG1897|consensus | 1096 | 97.06 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.06 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.0 | |
| KOG4640|consensus | 665 | 96.97 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 96.94 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.93 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.92 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 96.89 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.87 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 96.87 | |
| KOG4640|consensus | 665 | 96.85 | ||
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 96.85 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.85 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.8 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 96.72 | |
| KOG1897|consensus | 1096 | 96.71 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 96.65 | |
| KOG2444|consensus | 238 | 96.63 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 96.61 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 96.57 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 96.55 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 96.48 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.44 | |
| KOG2444|consensus | 238 | 96.28 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.24 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.22 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.2 | |
| PRK10115 | 686 | protease 2; Provisional | 96.17 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.09 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 95.99 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.95 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 95.95 | |
| KOG2079|consensus | 1206 | 95.84 | ||
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.76 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.71 | |
| KOG2079|consensus | 1206 | 95.71 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.66 | |
| KOG4441|consensus | 571 | 95.44 | ||
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.31 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.29 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.22 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 95.14 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 95.14 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 95.13 | |
| KOG2395|consensus | 644 | 95.08 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 95.07 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.05 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 94.75 | |
| KOG3630|consensus | 1405 | 94.74 | ||
| KOG1916|consensus | 1283 | 94.73 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 94.67 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 94.64 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 94.42 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 94.33 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 94.08 | |
| KOG4499|consensus | 310 | 94.06 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 94.0 | |
| KOG1916|consensus | 1283 | 93.95 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 93.89 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 93.88 | |
| KOG3630|consensus | 1405 | 93.82 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.72 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 93.7 | |
| KOG2377|consensus | 657 | 93.41 | ||
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 93.41 | |
| KOG2280|consensus | 829 | 93.36 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 93.15 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.13 | |
| KOG2280|consensus | 829 | 93.05 | ||
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 92.99 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 92.98 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 92.78 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 92.66 | |
| PRK10115 | 686 | protease 2; Provisional | 92.49 | |
| KOG4441|consensus | 571 | 92.45 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 92.31 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 92.3 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 91.8 | |
| KOG2377|consensus | 657 | 91.52 | ||
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 91.31 | |
| KOG2247|consensus | 615 | 91.14 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 91.13 | |
| KOG1900|consensus | 1311 | 91.08 | ||
| KOG2247|consensus | 615 | 90.83 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 90.67 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 90.23 | |
| PF03066 | 149 | Nucleoplasmin: Nucleoplasmin; InterPro: IPR004301 | 90.14 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 90.05 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 89.44 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 89.21 | |
| KOG4499|consensus | 310 | 88.84 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 88.75 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 88.75 | |
| KOG1900|consensus | 1311 | 86.55 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 86.39 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 86.32 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 85.37 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 83.95 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 82.97 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 82.94 | |
| PF10446 | 458 | DUF2457: Protein of unknown function (DUF2457); In | 82.83 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 82.43 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 82.0 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 81.27 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 80.6 | |
| KOG1983|consensus | 993 | 80.06 |
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-74 Score=541.26 Aligned_cols=400 Identities=50% Similarity=0.895 Sum_probs=348.1
Q ss_pred CeeeeCCc--cCCCCCeeeeChhHHhhhhccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEec
Q psy4510 51 RKVYLPGT--PLDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMS 128 (812)
Q Consensus 51 ~~~~~~~~--~~~~~~~~~~d~~~y~~~~~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~ 128 (812)
+++|+||+ +|+++|||++||+||.|+|.++++|||||||++||.++.+|+.||+++|+++|||+.+...|.|+||++.
T Consensus 36 ~~~~lpg~~~~l~~~EeL~~DpsaYe~lH~~~~gwPcLsfDVi~D~LG~eR~e~P~~~Ylv~gtQa~~~~~N~l~vlkl~ 115 (440)
T KOG0302|consen 36 AQVYLPGMSRPLGDDEELVADPSAYEMLHNFNSGWPCLSFDVIPDRLGDERTEFPHTAYLVAGTQALDAPDNELMVLKLS 115 (440)
T ss_pred ceeeccCCCCCCCCCceEecCHHHHHHhhcccCCCcccceeeecCCCCcccccCchHhhhhhhhhccccccCceEEEEee
Confidence 66999995 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC
Q psy4510 129 NLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 208 (812)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~ 208 (812)
||.++..+++.+.+++++|++ ++ .+|++..+.|.|. |..++|....+. +..+.|+=+..|.|+||++..
T Consensus 116 nl~~t~~~~~gd~~~~~edde---dD-----~~P~~~~~~i~h~-g~~NRvr~~~~~--~~~~~aswse~G~V~Vw~l~~ 184 (440)
T KOG0302|consen 116 NLHKTRNPNDGDGEDEEEDDE---DD-----RKPQIEMKSIPHY-GGINRVRVSRLG--NEVLCASWSENGRVQVWDLAP 184 (440)
T ss_pred eeecccCCccCCCCCccccch---hh-----ccccccccccccc-cccceeeecccC--CcceeeeecccCcEEEEEchh
Confidence 999998874433222222222 22 6799999999999 888887766542 456777888999999997654
Q ss_pred CCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEE
Q psy4510 209 AGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288 (812)
Q Consensus 209 ~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 288 (812)
. |-+.+.++...-. . ..+|++++.+|.++.++|+|||-..+.|
T Consensus 185 ~----------------------------l~~l~~~~~~~~~---s------~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 185 H----------------------------LNALSEPGLEVKD---S------EFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred h----------------------------hhhhcCccccccc---c------ccCceEEecccCccceeeeccccccccc
Confidence 2 1122222211111 1 3599999999999999999999777889
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
++|++-+.|++|.+.+ +.|.+...++.+|+.+|.+++|+|....+|+|||.||+|+|||+|.+....++.+ .+|.+.
T Consensus 228 lsGDc~~~I~lw~~~~-g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~--kAh~sD 304 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPST-GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST--KAHNSD 304 (440)
T ss_pred ccCccccceEeeeecc-CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe--eccCCc
Confidence 9999999999999998 5799999999999999999999999999999999999999999998877777766 799999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
|+.|+|+....+||+|+.||+++|||+|+++.++++..|+.|..+|++|.|+|.....|+++|.|.+|.+||+......+
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~e 384 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEE 384 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChh
Confidence 99999999989999999999999999999999999999999999999999999998999999999999999999987754
Q ss_pred HH--HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 449 IE--QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 449 ~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
+. .....+.++|||++|+|++++.++.++||++.|+++++++.+|+++|++++
T Consensus 385 e~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVfktIs 439 (440)
T KOG0302|consen 385 EIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFKTIS 439 (440)
T ss_pred hhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEEEecc
Confidence 43 222336789999999999999999999999999999999999999998865
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-52 Score=396.07 Aligned_cols=330 Identities=23% Similarity=0.369 Sum_probs=296.4
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw 250 (812)
.+.||.++|.|++|+| +|..||||+.|.++|+||+.+.. +..+.++|...|.|++|+|||+.||+|+.+|.|++|
T Consensus 110 S~~GH~e~Vl~~~fsp-~g~~l~tGsGD~TvR~WD~~TeT----p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 110 SIAGHGEAVLSVQFSP-TGSRLVTGSGDTTVRLWDLDTET----PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ccCCCCCcEEEEEecC-CCceEEecCCCceEEeeccCCCC----cceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 4559999999999999 99999999999999999999987 788999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC----CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST----EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|.+++ ......+++|...|.+|+|.|- ..++||+++.||+|+|||+..+. +...+.+|+.+|+|++
T Consensus 185 dpktg------~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~----~~~~lsgHT~~VTCvr 254 (480)
T KOG0271|consen 185 DPKTG------QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGT----CVRTLSGHTASVTCVR 254 (480)
T ss_pred cCCCC------CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCce----EEEEeccCccceEEEE
Confidence 99987 3666789999999999999873 22689999999999999999887 6888999999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc-----------CCCC----------------
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-----------RTEP---------------- 379 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-----------~~~~---------------- 379 (812)
|--+| ++++||.|++|++|+.. .+.+...+ .+|...|+.++.+ |.++
T Consensus 255 wGG~g--liySgS~DrtIkvw~a~---dG~~~r~l-kGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY 328 (480)
T KOG0271|consen 255 WGGEG--LIYSGSQDRTIKVWRAL---DGKLCREL-KGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERY 328 (480)
T ss_pred EcCCc--eEEecCCCceEEEEEcc---chhHHHhh-cccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHH
Confidence 98666 89999999999999987 45556666 8999999999877 2232
Q ss_pred ---------EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 380 ---------LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 380 ---------~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
.|++|++|.++.+|+... ..+++..+.+|..-|..+.|+|++ +++|+++.|..|++||.++++.
T Consensus 329 ~~~~~~~~erlVSgsDd~tlflW~p~~--~kkpi~rmtgHq~lVn~V~fSPd~-r~IASaSFDkSVkLW~g~tGk~---- 401 (480)
T KOG0271|consen 329 EAVLKDSGERLVSGSDDFTLFLWNPFK--SKKPITRMTGHQALVNHVSFSPDG-RYIASASFDKSVKLWDGRTGKF---- 401 (480)
T ss_pred HHhhccCcceeEEecCCceEEEecccc--cccchhhhhchhhheeeEEECCCc-cEEEEeecccceeeeeCCCcch----
Confidence 499999999999999875 667899999999999999999997 7999999999999999887731
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeE
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTI 530 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~ 530 (812)
T Consensus 402 -------------------------------------------------------------------------------- 401 (480)
T KOG0271|consen 402 -------------------------------------------------------------------------------- 401 (480)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc
Q psy4510 531 ISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV 610 (812)
Q Consensus 531 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d 610 (812)
...+++|-+.|+.++|+.|.+.|+++ +.|
T Consensus 402 -------------------------------------------------lasfRGHv~~VYqvawsaDsRLlVS~--SkD 430 (480)
T KOG0271|consen 402 -------------------------------------------------LASFRGHVAAVYQVAWSADSRLLVSG--SKD 430 (480)
T ss_pred -------------------------------------------------hhhhhhccceeEEEEeccCccEEEEc--CCC
Confidence 12356777899999999999999998 999
Q ss_pred ceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 611 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
.++++|++++.+ +...+.||..+|.++.|+| ||..+++|+.|+.+++|.
T Consensus 431 sTLKvw~V~tkK-------------------------l~~DLpGh~DEVf~vDwsp-DG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 431 STLKVWDVRTKK-------------------------LKQDLPGHADEVFAVDWSP-DGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ceEEEEEeeeee-------------------------ecccCCCCCceEEEEEecC-CCceeecCCCceEEEeec
Confidence 999999999987 6778999999999999999 899999999999999995
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=396.08 Aligned_cols=368 Identities=25% Similarity=0.398 Sum_probs=299.9
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+...+.||.++|.|++|+|+|+.|++|+.|.++|+||+.+. .|.++.++|...|.|++|+||| ..||+|+.|
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te-------Tp~~t~KgH~~WVlcvawsPDg-k~iASG~~d 178 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE-------TPLFTCKGHKNWVLCVAWSPDG-KKIASGSKD 178 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC-------CcceeecCCccEEEEEEECCCc-chhhccccC
Confidence 56778999999999999999999999999999999999985 9999999999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC-----CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCe
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 369 (812)
|+|++||..+++. ....+.+|...|++++|.| ..+ .||+++.||.|+|||+. ...++..+ .+|..+|
T Consensus 179 g~I~lwdpktg~~---~g~~l~gH~K~It~Lawep~hl~p~~r-~las~skDg~vrIWd~~---~~~~~~~l-sgHT~~V 250 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQ---IGRALRGHKKWITALAWEPLHLVPPCR-RLASSSKDGSVRIWDTK---LGTCVRTL-SGHTASV 250 (480)
T ss_pred CeEEEecCCCCCc---ccccccCcccceeEEeecccccCCCcc-ceecccCCCCEEEEEcc---CceEEEEe-ccCccce
Confidence 9999999999875 5788999999999999976 344 69999999999999998 56677777 8999999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhH
Q psy4510 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 449 (812)
+|+.|--+| +|++|+.|++|++|+.. .+.....+++|...|+.++.+.+ ..|-+|..|.+=+-..... +
T Consensus 251 TCvrwGG~g-liySgS~DrtIkvw~a~---dG~~~r~lkGHahwvN~lalsTd--y~LRtgaf~~t~~~~~~~s-----e 319 (480)
T KOG0271|consen 251 TCVRWGGEG-LIYSGSQDRTIKVWRAL---DGKLCRELKGHAHWVNHLALSTD--YVLRTGAFDHTGRKPKSFS-----E 319 (480)
T ss_pred EEEEEcCCc-eEEecCCCceEEEEEcc---chhHHHhhcccchheeeeeccch--hhhhccccccccccCCChH-----H
Confidence 999997555 99999999999999997 57889999999999999999875 4666766554322211110 1
Q ss_pred HHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 450 EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
. .......+. +..++.+..+++++++...+.|. |.
T Consensus 320 ~-~~~Al~rY~----------------~~~~~~~erlVSgsDd~tlflW~------------------------p~---- 354 (480)
T KOG0271|consen 320 E-QKKALERYE----------------AVLKDSGERLVSGSDDFTLFLWN------------------------PF---- 354 (480)
T ss_pred H-HHHHHHHHH----------------HhhccCcceeEEecCCceEEEec------------------------cc----
Confidence 1 111111110 01122224566666665433322 21
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
........+.+|..-|+.+.||||+++++++ +-
T Consensus 355 ---------------------------------------------~~kkpi~rmtgHq~lVn~V~fSPd~r~IASa--SF 387 (480)
T KOG0271|consen 355 ---------------------------------------------KSKKPITRMTGHQALVNHVSFSPDGRYIASA--SF 387 (480)
T ss_pred ---------------------------------------------ccccchhhhhchhhheeeEEECCCccEEEEe--ec
Confidence 0112344577899999999999999999999 89
Q ss_pred cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 610 VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 610 dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
|..|++|+..+++ -+.+|+||-+.|+.++|+. |.++|+|+|.|.++++|++
T Consensus 388 DkSVkLW~g~tGk-------------------------~lasfRGHv~~VYqvawsa-DsRLlVS~SkDsTLKvw~V--- 438 (480)
T KOG0271|consen 388 DKSVKLWDGRTGK-------------------------FLASFRGHVAAVYQVAWSA-DSRLLVSGSKDSTLKVWDV--- 438 (480)
T ss_pred ccceeeeeCCCcc-------------------------hhhhhhhccceeEEEEecc-CccEEEEcCCCceEEEEEe---
Confidence 9999999999998 6889999999999999999 7778888888777777765
Q ss_pred ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 690 GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 690 ~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
++.+ +..-|.||.+.|.++.|||||+ .+++++.|..+++|.
T Consensus 439 -----------------------------~tkK----l~~DLpGh~DEVf~vDwspDG~-rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 439 -----------------------------RTKK----LKQDLPGHADEVFAVDWSPDGQ-RVASGGKDKVLRLWR 479 (480)
T ss_pred -----------------------------eeee----ecccCCCCCceEEEEEecCCCc-eeecCCCceEEEeec
Confidence 3444 5678999999999999999999 699999999999995
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-49 Score=386.36 Aligned_cols=496 Identities=17% Similarity=0.230 Sum_probs=382.4
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---- 244 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---- 244 (812)
...+.+|...++.+.||| .|.++|+|...|+|||||....+. .....++.-.++|..++|+.++++|++.++.
T Consensus 52 ~~iYtEH~~~vtVAkySP-sG~yiASGD~sG~vRIWdtt~~~h--iLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerf 128 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSP-SGFYIASGDVSGKVRIWDTTQKEH--ILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERF 128 (603)
T ss_pred eeeeccccceeEEEEeCC-CceEEeecCCcCcEEEEeccCcce--eeeeeeeecccccccceeCCCCcEEEEEecCccce
Confidence 445568999999999999 999999999999999999877542 2455677788999999999999999887743
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
|.+.+|| +| ..+-.+.||...|.+++|-|..+.++++|+.|++|.+|+-..-+ ....+..|..-|+|
T Consensus 129 g~~F~~D--SG-------~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFK----Fk~s~r~HskFV~~ 195 (603)
T KOG0318|consen 129 GHVFLWD--SG-------NSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFK----FKSSFREHSKFVNC 195 (603)
T ss_pred eEEEEec--CC-------CccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCee----eeecccccccceee
Confidence 2355565 33 55778999999999999999999999999999999999855443 45677889999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC-----
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK----- 399 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~----- 399 (812)
+.|+|+|. .|++++.||+|.+||-.++.....+.. ..+|.+.|.+++|+|++..|++++.|.+++|||+...+
T Consensus 196 VRysPDG~-~Fat~gsDgki~iyDGktge~vg~l~~-~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~ 273 (603)
T KOG0318|consen 196 VRYSPDGS-RFATAGSDGKIYIYDGKTGEKVGELED-SDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTW 273 (603)
T ss_pred EEECCCCC-eEEEecCCccEEEEcCCCccEEEEecC-CCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEe
Confidence 99999998 699999999999999886654333332 36999999999999999999999999999999986321
Q ss_pred -----------------------------------CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 -----------------------------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 -----------------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
...++..+.+|...|+++..+|++ .+|++|+.||.|.-|+..++
T Consensus 274 ~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~-~~i~SgsyDG~I~~W~~~~g 352 (603)
T KOG0318|consen 274 PMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDG-KTIYSGSYDGHINSWDSGSG 352 (603)
T ss_pred ecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCC-CEEEeeccCceEEEEecCCc
Confidence 223566778999999999999998 79999999999999999988
Q ss_pred CchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcC
Q psy4510 445 RDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHP 524 (812)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p 524 (812)
.. ..++...+...|+.++-+..+ .++..+-++.+.+................+. +...++..+
T Consensus 353 ~~---------------~~~~g~~h~nqI~~~~~~~~~-~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~-QP~~lav~~ 415 (603)
T KOG0318|consen 353 TS---------------DRLAGKGHTNQIKGMAASESG-ELFTIGWDDTLRVISLKDNGYTKSEVVKLGS-QPKGLAVLS 415 (603)
T ss_pred cc---------------cccccccccceEEEEeecCCC-cEEEEecCCeEEEEecccCcccccceeecCC-CceeEEEcC
Confidence 53 122223444578888877753 3444444555555543322222211111122 223666666
Q ss_pred CCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEE
Q psy4510 525 QLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLA 604 (812)
Q Consensus 525 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~ 604 (812)
++ ..++.++..+..+++.... .......-...+++++|+++.+++
T Consensus 416 d~-~~avv~~~~~iv~l~~~~~----------------------------------~~~~~~~y~~s~vAv~~~~~~vaV 460 (603)
T KOG0318|consen 416 DG-GTAVVACISDIVLLQDQTK----------------------------------VSSIPIGYESSAVAVSPDGSEVAV 460 (603)
T ss_pred CC-CEEEEEecCcEEEEecCCc----------------------------------ceeeccccccceEEEcCCCCEEEE
Confidence 64 3444444444333321110 011122335678999999999999
Q ss_pred EeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEE
Q psy4510 605 GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684 (812)
Q Consensus 605 ~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iW 684 (812)
| ++||.|+||.+...... ....+..|.++|++++||| ++.+||++...+.|.+|
T Consensus 461 G--G~Dgkvhvysl~g~~l~-----------------------ee~~~~~h~a~iT~vaySp-d~~yla~~Da~rkvv~y 514 (603)
T KOG0318|consen 461 G--GQDGKVHVYSLSGDELK-----------------------EEAKLLEHRAAITDVAYSP-DGAYLAAGDASRKVVLY 514 (603)
T ss_pred e--cccceEEEEEecCCccc-----------------------ceeeeecccCCceEEEECC-CCcEEEEeccCCcEEEE
Confidence 9 99999999999876421 3445677999999999999 89999999999999999
Q ss_pred ecCCCce-----------eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEe
Q psy4510 685 TPREAGA-----------WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 685 d~~~~~~-----------~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s 753 (812)
|+.+..+ +.+++++|+..++|+||-|.+|.||++..... .+....+|...|+.|.|..+.. |+|
T Consensus 515 d~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~---~i~iknAH~~gVn~v~wlde~t--vvS 589 (603)
T KOG0318|consen 515 DVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAK---HIIIKNAHLGGVNSVAWLDEST--VVS 589 (603)
T ss_pred EcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhh---heEeccccccCceeEEEecCce--EEe
Confidence 9998433 34557899999999999999999999987654 3556678999999999997774 999
Q ss_pred eccCCceEEeeec
Q psy4510 754 CSVDRSNRIGARR 766 (812)
Q Consensus 754 ~s~Dg~i~iWd~~ 766 (812)
+|.|..|++|.+.
T Consensus 590 sG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 590 SGQDANIKVWNVT 602 (603)
T ss_pred ccCcceeEEeccc
Confidence 9999999999874
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-49 Score=404.72 Aligned_cols=496 Identities=17% Similarity=0.183 Sum_probs=403.0
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC-CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG-HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
....+++++.+| ++.+|++++....+++|++.+++ ..+..+. |+.||.-++|+|.+..|++|+.|+.++|||+.
T Consensus 61 d~d~ita~~l~~-d~~~L~~a~rs~llrv~~L~tgk----~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~ 135 (775)
T KOG0319|consen 61 DEDEITALALTP-DEEVLVTASRSQLLRVWSLPTGK----LIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIK 135 (775)
T ss_pred chhhhheeeecC-CccEEEEeeccceEEEEEcccch----HhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEee
Confidence 457789999999 99999999999999999999997 7788887 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCC-CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
.+ .+.+.|+||.+.|.++.|+|+-. .+|++|+.|+++++||+..... +...+..|.+.|+++.|++++.
T Consensus 136 ~~-------~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t---cl~~~~~H~S~vtsL~~~~d~~ 205 (775)
T KOG0319|consen 136 NG-------YCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT---CLHTMILHKSAVTSLAFSEDSL 205 (775)
T ss_pred CC-------EEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch---HHHHHHhhhhheeeeeeccCCc
Confidence 85 88999999999999999999863 3589999999999999997653 5788899999999999999988
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEecCCCC--------
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-----EPLIVSGGDDGCIHVWDLRRFK-------- 399 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~l~sg~~dg~i~iwd~~~~~-------- 399 (812)
. +++++.|..+.+||+.. .++..++ .-...+-++.+-++ +.+++|.|.+|.+++||....+
T Consensus 206 ~-~ls~~RDkvi~vwd~~~---~~~l~~l--p~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~ 279 (775)
T KOG0319|consen 206 E-LLSVGRDKVIIVWDLVQ---YKKLKTL--PLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQS 279 (775)
T ss_pred e-EEEeccCcEEEEeehhh---hhhhhee--chhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccC
Confidence 4 89999999999999963 3333433 22345666666665 5699999999999999986321
Q ss_pred --------------------------------CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 400 --------------------------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 400 --------------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
..++...+-+..+.|..++|-....++|+.++..+.++++++.+.
T Consensus 280 ~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~--- 356 (775)
T KOG0319|consen 280 DSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTS--- 356 (775)
T ss_pred CchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCC---
Confidence 011122233456678889887655689999999999999988877
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE---EeecCCCCeeEEEEcC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL---FIHLGQKEIKELHWHP 524 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~p 524 (812)
.+...+.+...|.++....++ .++++++.|...++|..+....... ....+...|.+++++.
T Consensus 357 --------------~c~ii~GH~e~vlSL~~~~~g-~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~ 421 (775)
T KOG0319|consen 357 --------------YCQIIPGHTEAVLSLDVWSSG-DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSK 421 (775)
T ss_pred --------------ceEEEeCchhheeeeeecccC-cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecc
Confidence 444556666679999844443 6899999888766665544433322 2344567899999988
Q ss_pred CCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEE
Q psy4510 525 QLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLA 604 (812)
Q Consensus 525 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~ 604 (812)
.+...++..+.+ ..+++|.+........ ............|...|++++++|+.+.+++
T Consensus 422 ~~asffvsvS~D-----~tlK~W~l~~s~~~~~----------------~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT 480 (775)
T KOG0319|consen 422 LGASFFVSVSQD-----CTLKLWDLPKSKETAF----------------PIVLTCRYTERAHDKDINCVAIAPNDKLIAT 480 (775)
T ss_pred cCccEEEEecCC-----ceEEEecCCCcccccc----------------cceehhhHHHHhhcccccceEecCCCceEEe
Confidence 877777777777 6777777666221111 0112233456789999999999999999999
Q ss_pred EeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEE
Q psy4510 605 GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684 (812)
Q Consensus 605 ~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iW 684 (812)
| |.|.+.+||++.... ++.++.||+..|++|.|+| ..+++||+|.|++||||
T Consensus 481 ~--SqDktaKiW~le~~~-------------------------l~~vLsGH~RGvw~V~Fs~-~dq~laT~SgD~TvKIW 532 (775)
T KOG0319|consen 481 G--SQDKTAKIWDLEQLR-------------------------LLGVLSGHTRGVWCVSFSK-NDQLLATCSGDKTVKIW 532 (775)
T ss_pred c--ccccceeeecccCce-------------------------EEEEeeCCccceEEEEecc-ccceeEeccCCceEEEE
Confidence 9 999999999999665 7899999999999999999 56799999999999999
Q ss_pred ecCCCce-----------eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEe
Q psy4510 685 TPREAGA-----------WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 685 d~~~~~~-----------~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s 753 (812)
.+.+... ..+ .|-.+|+.|++++.||.|+||+++++. +..++.+|++.|++|+-+|.+. +++|
T Consensus 533 ~is~fSClkT~eGH~~aVlra-~F~~~~~qliS~~adGliKlWnikt~e----C~~tlD~H~DrvWaL~~~~~~~-~~~t 606 (775)
T KOG0319|consen 533 SISTFSCLKTFEGHTSAVLRA-SFIRNGKQLISAGADGLIKLWNIKTNE----CEMTLDAHNDRVWALSVSPLLD-MFVT 606 (775)
T ss_pred EeccceeeeeecCccceeEee-eeeeCCcEEEeccCCCcEEEEeccchh----hhhhhhhccceeEEEeecCccc-eeEe
Confidence 9998333 222 356778999999999999999999998 4789999999999999999999 8999
Q ss_pred eccCCceEEee
Q psy4510 754 CSVDRSNRIGA 764 (812)
Q Consensus 754 ~s~Dg~i~iWd 764 (812)
||.||.|.+|.
T Consensus 607 gg~Dg~i~~wk 617 (775)
T KOG0319|consen 607 GGGDGRIIFWK 617 (775)
T ss_pred cCCCeEEEEee
Confidence 99999999995
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-51 Score=395.35 Aligned_cols=375 Identities=24% Similarity=0.450 Sum_probs=297.0
Q ss_pred CCCCCeeeeChhHHhhhhccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCc
Q psy4510 60 LDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNER 139 (812)
Q Consensus 60 ~~~~~~~~~d~~~y~~~~~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~ 139 (812)
|+++-++.|| .+.++.|+|||||+||+||......+.| ..++|++||||++.++|+|+|+++. |+......++
T Consensus 23 WKkNtp~LYD-----lv~th~LeWPSLt~qWlPd~~~~~~~~~-~~~rliLGthTs~~~~n~L~iA~v~-lp~~~~~~~~ 95 (422)
T KOG0264|consen 23 WKKNTPFLYD-----LVITHALEWPSLTVQWLPDVTKPEEKDF-SKQRLILGTHTSGSEQNYLVIASVQ-LPTDDAQFED 95 (422)
T ss_pred HhhcCcHHHH-----HhhhccccccceEEEEcCCcccccCCCc-eeEEEEEEeecCCCCccEEEEEeec-CCCccccccc
Confidence 8999999988 5555589999999999999655555555 5579999999999999999999974 4332221111
Q ss_pred ccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc
Q psy4510 140 ELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 219 (812)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l 219 (812)
. ..+.+.. |-+.+....++++ ..... -|.+.|+.+++.||+..++||++..+.|.|||..+...
T Consensus 96 ~----~~~~e~~-e~~g~~~~~~~v~--i~~~i-~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s-------- 159 (422)
T KOG0264|consen 96 K----HYDEERG-EFGGFGAVSGKVE--ISQKI-NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPS-------- 159 (422)
T ss_pred c----ccccccc-ccCCccccccceE--EEEec-cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCC--------
Confidence 1 1111111 1011111222222 21222 46677888899999999999999999999999876431
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
..-+++ ...|-.++.||.++.++|+|++...+.|++|+.|++|++
T Consensus 160 ----------------~~~~~~-------------------~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~l 204 (422)
T KOG0264|consen 160 ----------------KPKASG-------------------ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICL 204 (422)
T ss_pred ----------------cccccc-------------------cCCCceEEEeecccccccccccccceeEeeccCCCcEEE
Confidence 111111 247888999999999999999999899999999999999
Q ss_pred EeCCCCCc---ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 300 WTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 300 wd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
||+..... .......+.+|...|.+++|++....+|++++.|+.+.|||+|+. +..+.... .+|.+.|+|++|+|
T Consensus 205 wdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~-~ah~~~vn~~~fnp 282 (422)
T KOG0264|consen 205 WDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSV-KAHSAEVNCVAFNP 282 (422)
T ss_pred EeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccc-cccCCceeEEEeCC
Confidence 99987654 133456788999999999999999999999999999999999974 34444444 89999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 377 TEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 377 ~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
.+. +||||+.|++|++||+|++ ..++.++.+|...|.+|.|+|+...+||+++.|+++.+||+..... .+....
T Consensus 283 ~~~~ilAT~S~D~tV~LwDlRnL--~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~---eq~~ed 357 (422)
T KOG0264|consen 283 FNEFILATGSADKTVALWDLRNL--NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGE---EQSPED 357 (422)
T ss_pred CCCceEEeccCCCcEEEeechhc--ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccc---ccChhh
Confidence 775 9999999999999999984 4689999999999999999999999999999999999999987654 233566
Q ss_pred hccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEEeCCCe-EEEEe
Q psy4510 456 LKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGF-NIFRT 499 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~-~~~~~ 499 (812)
..+.||+++|.|.|+. .|.+++|+|+.|+++++++++++ .||..
T Consensus 358 a~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~ 403 (422)
T KOG0264|consen 358 AEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQM 403 (422)
T ss_pred hccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeec
Confidence 7889999999999998 69999999999999999999986 55544
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-49 Score=400.87 Aligned_cols=549 Identities=19% Similarity=0.257 Sum_probs=419.0
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
++|++ +|+.|+|...| .|.+-|+.++... ....-......+++++.+|++++|++++..+.+++|.+.++
T Consensus 25 ~~~s~-nG~~L~t~~~d-~Vi~idv~t~~~~--l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tg------ 94 (775)
T KOG0319|consen 25 VAWSS-NGQHLYTACGD-RVIIIDVATGSIA--LPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTG------ 94 (775)
T ss_pred eeECC-CCCEEEEecCc-eEEEEEccCCcee--cccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccc------
Confidence 89999 99999999876 6888898887631 11222345568999999999999999999999999999996
Q ss_pred CCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe-EEEEEE
Q psy4510 262 TPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR-VLASCS 339 (812)
Q Consensus 262 ~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-~l~s~~ 339 (812)
+.+..++. |++++..++|+|.+ .+|++|+.||.++|||+..+. ....|+||.+.|..+.|+|+-.+ +|++|.
T Consensus 95 -k~irswKa~He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~----~th~fkG~gGvVssl~F~~~~~~~lL~sg~ 168 (775)
T KOG0319|consen 95 -KLIRSWKAIHEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGY----CTHSFKGHGGVVSSLLFHPHWNRWLLASGA 168 (775)
T ss_pred -hHhHhHhhccCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCE----EEEEecCCCceEEEEEeCCccchhheeecC
Confidence 78888888 99999999999999 999999999999999999887 78899999999999999998653 689999
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
.|+++++||++...+ |+... ..|.+.|++++|.+++.-+++++.|..+.|||+.+ .+.+.++.- ...+-++.+
T Consensus 169 ~D~~v~vwnl~~~~t--cl~~~-~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~---~~~l~~lp~-ye~~E~vv~ 241 (775)
T KOG0319|consen 169 TDGTVRVWNLNDKRT--CLHTM-ILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQ---YKKLKTLPL-YESLESVVR 241 (775)
T ss_pred CCceEEEEEcccCch--HHHHH-HhhhhheeeeeeccCCceEEEeccCcEEEEeehhh---hhhhheech-hhheeeEEE
Confidence 999999999986433 66666 89999999999999999999999999999999964 333333332 234566666
Q ss_pred ccC--C--CcEEEEEECCCCEEEEEcCCCCchhHHHhhh--hhccC-------------CCceEEee------------c
Q psy4510 420 HPT--E--SSTFASGGADDQIALWDLAVERDSEIEQREA--ELKDL-------------PSQLLFIH------------L 468 (812)
Q Consensus 420 ~p~--~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~-------------~~~~~~~~------------~ 468 (812)
-+. | ..++.++|.+|.+++||....+......... +.... ..|-++.. +
T Consensus 242 l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG 321 (775)
T KOG0319|consen 242 LREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVG 321 (775)
T ss_pred echhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcC
Confidence 655 1 1489999999999999998876543322110 00000 01111111 2
Q ss_pred CCCceeEEEEc-CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecc
Q psy4510 469 GQKEIKELHWH-PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMS 547 (812)
Q Consensus 469 ~~~~v~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~ 547 (812)
.+..|.++.|- |....+++++....+++|.. .....+ ....|...|.++....+ +.++++++.+ ..+.+|
T Consensus 322 ~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~-~~~~c~--ii~GH~e~vlSL~~~~~--g~llat~sKD----~svilW 392 (775)
T KOG0319|consen 322 YNDEILDMKFLGPEESHLAVATNSPELRLYTL-PTSYCQ--IIPGHTEAVLSLDVWSS--GDLLATGSKD----KSVILW 392 (775)
T ss_pred CchhheeeeecCCccceEEEEeCCCceEEEec-CCCceE--EEeCchhheeeeeeccc--CcEEEEecCC----ceEEEE
Confidence 23467777764 45556777777777888833 332223 55667778999885555 5455554443 222333
Q ss_pred cCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC-eEEEEeecCcceEEEEeccccccccC
Q psy4510 548 NLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS-TTLAGVWGEVGKVGIWDLKTALQTVD 626 (812)
Q Consensus 548 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~~~~~ 626 (812)
.+... -....+.....+|.+.|.+++++..+. +++++ |.|+++++|++...+...
T Consensus 393 r~~~~---------------------~~~~~~~a~~~gH~~svgava~~~~~asffvsv--S~D~tlK~W~l~~s~~~~- 448 (775)
T KOG0319|consen 393 RLNNN---------------------CSKSLCVAQANGHTNSVGAVAGSKLGASFFVSV--SQDCTLKLWDLPKSKETA- 448 (775)
T ss_pred EecCC---------------------cchhhhhhhhcccccccceeeecccCccEEEEe--cCCceEEEecCCCccccc-
Confidence 22000 012234556789999999999987665 55666 899999999998743211
Q ss_pred CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE----------E
Q psy4510 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY----------L 696 (812)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~----------~ 696 (812)
+.....+-.+...|...|.+++.+| ...++||||.|++.+||+++.+.+..++ -
T Consensus 449 ---------------~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~ 512 (775)
T KOG0319|consen 449 ---------------FPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVS 512 (775)
T ss_pred ---------------ccceehhhHHHHhhcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCCccceEEEE
Confidence 0011113335678999999999999 6779999999999999999975444332 4
Q ss_pred ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEEee
Q psy4510 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSL 776 (812)
Q Consensus 697 ~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~~~ 776 (812)
|++..+.|||+|.|++|+||.+.+.. ++++|.||+..|..+.|-.+|+ .|+||+.||-|+||++++.. |...-+
T Consensus 513 Fs~~dq~laT~SgD~TvKIW~is~fS----ClkT~eGH~~aVlra~F~~~~~-qliS~~adGliKlWnikt~e-C~~tlD 586 (775)
T KOG0319|consen 513 FSKNDQLLATCSGDKTVKIWSISTFS----CLKTFEGHTSAVLRASFIRNGK-QLISAGADGLIKLWNIKTNE-CEMTLD 586 (775)
T ss_pred eccccceeEeccCCceEEEEEeccce----eeeeecCccceeEeeeeeeCCc-EEEeccCCCcEEEEeccchh-hhhhhh
Confidence 79999999999999999999999998 5889999999999999999999 59999999999999999987 455568
Q ss_pred eeeEEEeeecc-hhhhhhhheecceeeeecCCC
Q psy4510 777 VHCIFVWLKYQ-LFVDVYYWAFVDLVYYIFPDL 808 (812)
Q Consensus 777 ~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~ 808 (812)
+|+--.|.--. +..+.|+.+.-|-++-+|.|.
T Consensus 587 ~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 587 AHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDV 619 (775)
T ss_pred hccceeEEEeecCccceeEecCCCeEEEEeecC
Confidence 88888886555 778889999999999998773
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-45 Score=357.79 Aligned_cols=529 Identities=16% Similarity=0.211 Sum_probs=385.9
Q ss_pred eEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
-.-+.-.| .++ +|.+.+. .|.+-++++.. ....+..|..+++-..|||.|-|+|+|...|.||||+....
T Consensus 21 ~~~ig~dp-kgd~ilY~nGk--sv~ir~i~~~~----~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~-- 91 (603)
T KOG0318|consen 21 PIIIGGDP-KGDNILYTNGK--SVIIRNIDNPA----SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQK-- 91 (603)
T ss_pred ceEeccCC-CCCeEEEeCCC--EEEEEECCCcc----ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCc--
Confidence 34456677 555 5555554 78898888876 56678899999999999999999999999999999998763
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-C--CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-K--RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-d--g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
..-....++.-.++|..|+|++++.++.|+|-. + |.+.+|| ++. ....+.||...|+++.|-|.-+.-
T Consensus 92 ---~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~----SvGei~GhSr~ins~~~KpsRPfR 162 (603)
T KOG0318|consen 92 ---EHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGN----SVGEITGHSRRINSVDFKPSRPFR 162 (603)
T ss_pred ---ceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec--CCC----ccceeeccceeEeeeeccCCCceE
Confidence 112334456667899999999999555566532 3 3455565 444 467789999999999999999988
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc---cCC
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHT 411 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~ 411 (812)
+++|+.|++|.+|+-. ..+--.++ ..|..-|+|+.|+|+|.++++.+.||.|.+||=. ++..+..+. +|+
T Consensus 163 i~T~sdDn~v~ffeGP---PFKFk~s~-r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGk---tge~vg~l~~~~aHk 235 (603)
T KOG0318|consen 163 IATGSDDNTVAFFEGP---PFKFKSSF-REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGK---TGEKVGELEDSDAHK 235 (603)
T ss_pred EEeccCCCeEEEeeCC---Ceeeeecc-cccccceeeEEECCCCCeEEEecCCccEEEEcCC---CccEEEEecCCCCcc
Confidence 9999999999999854 22222333 7899999999999999999999999999999987 677888887 899
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC--CCceeEEEEcCCCCCEEEEE
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG--QKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~~~~~ 489 (812)
+.|.+++|+|+. ..|++++.|.+++|||+.+.+.. ..+.... ...-..+.|.. ..+++.
T Consensus 236 GsIfalsWsPDs-~~~~T~SaDkt~KIWdVs~~slv---------------~t~~~~~~v~dqqvG~lWqk---d~lItV 296 (603)
T KOG0318|consen 236 GSIFALSWSPDS-TQFLTVSADKTIKIWDVSTNSLV---------------STWPMGSTVEDQQVGCLWQK---DHLITV 296 (603)
T ss_pred ccEEEEEECCCC-ceEEEecCCceEEEEEeeccceE---------------EEeecCCchhceEEEEEEeC---CeEEEE
Confidence 999999999996 69999999999999999988431 1111111 12344556663 467777
Q ss_pred eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCC
Q psy4510 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
+.+|..-|....... .+.....|...|++++.+|++...+-++.++ .+.-|....+..
T Consensus 297 Sl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG------~I~~W~~~~g~~--------------- 354 (603)
T KOG0318|consen 297 SLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDG------HINSWDSGSGTS--------------- 354 (603)
T ss_pred EcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCc------eEEEEecCCccc---------------
Confidence 777766665555554 5555667788999999999963333333333 222233222211
Q ss_pred CccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccC----CcccccccccccCCCCC--
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD----DPFQLAEHNKKRGKGPG-- 643 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~-- 643 (812)
....-.+|...|.+++.+..+. +++. +.|.++++.++....-.-. ...+......... ...
T Consensus 355 ---------~~~~g~~h~nqI~~~~~~~~~~-~~t~--g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d-~~~av 421 (603)
T KOG0318|consen 355 ---------DRLAGKGHTNQIKGMAASESGE-LFTI--GWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSD-GGTAV 421 (603)
T ss_pred ---------cccccccccceEEEEeecCCCc-EEEE--ecCCeEEEEecccCcccccceeecCCCceeEEEcCC-CCEEE
Confidence 1112367889999999887665 5554 6899999998855421111 1111100000000 000
Q ss_pred -CCCCCeeeecCCCC--------ceEEEEeCCCCCCeEEecCCCceEEEEecCCCc------------eeEEEEecCCCC
Q psy4510 644 -IPTPPLFSFSGHLT--------EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG------------AWSVYLYTNRFG 702 (812)
Q Consensus 644 -~~~~~~~~~~gh~~--------~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~------------~~~~~~~s~dg~ 702 (812)
.-..-+..++.+.. .+.++|++| ++..+|.|+.|+.|+|+.+..+. .++..+||||+.
T Consensus 422 v~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~-~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~ 500 (603)
T KOG0318|consen 422 VACISDIVLLQDQTKVSSIPIGYESSAVAVSP-DGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGA 500 (603)
T ss_pred EEecCcEEEEecCCcceeeccccccceEEEcC-CCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCc
Confidence 00112333343332 467899999 89999999999999999998733 356778999999
Q ss_pred EEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEEeeee----
Q psy4510 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVH---- 778 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~---- 778 (812)
+||+|...+.|.+||+.+.+. -...+.-|++.|.+|+|||+.+ +|||||.|.+|.||+++.+...+...+||
T Consensus 501 yla~~Da~rkvv~yd~~s~~~---~~~~w~FHtakI~~~aWsP~n~-~vATGSlDt~Viiysv~kP~~~i~iknAH~~gV 576 (603)
T KOG0318|consen 501 YLAAGDASRKVVLYDVASREV---KTNRWAFHTAKINCVAWSPNNK-LVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGV 576 (603)
T ss_pred EEEEeccCCcEEEEEcccCce---ecceeeeeeeeEEEEEeCCCce-EEEeccccceEEEEEccChhhheEeccccccCc
Confidence 999999999999999998764 3344566999999999999999 89999999999999999998778888888
Q ss_pred eEEEeeecchhhh
Q psy4510 779 CIFVWLKYQLFVD 791 (812)
Q Consensus 779 ~~~~w~~~~~~~~ 791 (812)
+.+.|.....++.
T Consensus 577 n~v~wlde~tvvS 589 (603)
T KOG0318|consen 577 NSVAWLDESTVVS 589 (603)
T ss_pred eeEEEecCceEEe
Confidence 8889988765543
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=369.49 Aligned_cols=498 Identities=17% Similarity=0.203 Sum_probs=383.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.-..+|+|++-+| +..+||+|..||.|+||+..+.. ...++.+|+.+|+++.|...|..|++|+.|+.|.+||+-
T Consensus 63 ~~k~evt~l~~~~-d~l~lAVGYaDGsVqif~~~s~~----~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV 137 (888)
T KOG0306|consen 63 KKKAEVTCLRSSD-DILLLAVGYADGSVQIFSLESEE----ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLV 137 (888)
T ss_pred cccceEEEeeccC-CcceEEEEecCceEEeeccCCCc----eeeeecccccceEEEEEcccCceEeecCCCccEEEEEec
Confidence 3446899999999 99999999999999999998875 778899999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.. .-++.++||.+.|+.+-|.... .++++.+.|+.|++||+.+.. +..+...|.+.|+.+++.+ +
T Consensus 138 ~E-------~Gl~rL~GHkd~iT~~~F~~~~-~~lvS~sKDs~iK~WdL~tqh----Cf~Thvd~r~Eiw~l~~~~--~- 202 (888)
T KOG0306|consen 138 GE-------EGLFRLRGHKDSITQALFLNGD-SFLVSVSKDSMIKFWDLETQH----CFETHVDHRGEIWALVLDE--K- 202 (888)
T ss_pred cc-------eeeEEeecchHHHhHHhccCCC-eEEEEeccCceEEEEecccce----eeeEEecccceEEEEEEec--c-
Confidence 74 6788999999999999998855 899999999999999999987 6677788999999999998 3
Q ss_pred EEEEEECCCeEEEEECCCCCcc---------cceeecCCcC---------------------------------------
Q psy4510 334 VLASCSVDLSIRIWDTRVINTK---------SCMLTLPNAH--------------------------------------- 365 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~--------------------------------------- 365 (812)
++++++.|+.+++|++...... ....++....
T Consensus 203 ~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~ 282 (888)
T KOG0306|consen 203 LLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKI 282 (888)
T ss_pred eEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHH
Confidence 6999999999999998211100 0000000000
Q ss_pred -------------------------------------CCCeEEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCC--C-
Q psy4510 366 -------------------------------------TSDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKG--S- 402 (812)
Q Consensus 366 -------------------------------------~~~v~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~--~- 402 (812)
...+.++.|.|.+. .|+. -.+.++..|.+...... +
T Consensus 283 l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~-l~nNtv~~ysl~~s~~~~p~~ 361 (888)
T KOG0306|consen 283 LSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVL-LANNTVEWYSLENSGKTSPEA 361 (888)
T ss_pred HHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEE-eecCceEEEEeccCCCCCccc
Confidence 12345566666543 2333 45566777766541111 1
Q ss_pred ---ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc
Q psy4510 403 ---SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479 (812)
Q Consensus 403 ---~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 479 (812)
.-..+.+|...|.+++++.+. ..+++ +..+.+++|+..+.++ +.... ..-+.+..|-
T Consensus 362 ~~~~~i~~~GHR~dVRsl~vS~d~-~~~~S-ga~~SikiWn~~t~kc-----------------iRTi~-~~y~l~~~Fv 421 (888)
T KOG0306|consen 362 DRTSNIEIGGHRSDVRSLCVSSDS-ILLAS-GAGESIKIWNRDTLKC-----------------IRTIT-CGYILASKFV 421 (888)
T ss_pred cccceeeeccchhheeEEEeecCc-eeeee-cCCCcEEEEEccCcce-----------------eEEec-cccEEEEEec
Confidence 113567899999999999874 34444 4467899999998843 22222 1268888999
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 480 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
|.+..++++.-++.+.+|+..+......+. .|.+.|.+++..|++.+.+.++++. .+++|........+..
T Consensus 422 pgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~--AHdgaIWsi~~~pD~~g~vT~saDk------tVkfWdf~l~~~~~gt- 492 (888)
T KOG0306|consen 422 PGDRYIVLGTKNGELQVFDLASASLVETIR--AHDGAIWSISLSPDNKGFVTGSADK------TVKFWDFKLVVSVPGT- 492 (888)
T ss_pred CCCceEEEeccCCceEEEEeehhhhhhhhh--ccccceeeeeecCCCCceEEecCCc------EEEEEeEEEEeccCcc-
Confidence 998878888888889999887765555443 5678999999999988777777664 3333332111110000
Q ss_pred cccccCCCCCCccccC-CCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccccc
Q psy4510 560 LEDDESEGSGDEDRRK-DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKR 638 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 638 (812)
+.+ -.............|.++.+||||++|+++ --|.+|+||-+++.+
T Consensus 493 -------------~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVs--LLdnTVkVyflDtlK---------------- 541 (888)
T KOG0306|consen 493 -------------QKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVS--LLDNTVKVYFLDTLK---------------- 541 (888)
T ss_pred -------------cceeeeeccceEEeccccEEEEEEcCCCcEEEEE--eccCeEEEEEeccee----------------
Confidence 000 001122334456789999999999999998 889999999999987
Q ss_pred CCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc-----------eeEEEEecCCCCEEEee
Q psy4510 639 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-----------AWSVYLYTNRFGVLATG 707 (812)
Q Consensus 639 ~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~-----------~~~~~~~s~dg~~lasg 707 (812)
...++.||.-+|.|+..|| |+++++|||.|++|+||-++-|. +.++. |-|+...+.++
T Consensus 542 ---------FflsLYGHkLPV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~-F~P~~~~FFt~ 610 (888)
T KOG0306|consen 542 ---------FFLSLYGHKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQ-FLPKTHLFFTC 610 (888)
T ss_pred ---------eeeeecccccceeEEeccC-CcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEE-EcccceeEEEe
Confidence 6778999999999999999 89999999999999999998643 23343 56688899999
Q ss_pred cCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 708 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 708 s~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+.|+.|+-||...-+ .++.+.||...|+|++.+|+|. +++|+|.|.+||+|...+.
T Consensus 611 gKD~kvKqWDg~kFe----~iq~L~~H~~ev~cLav~~~G~-~vvs~shD~sIRlwE~tde 666 (888)
T KOG0306|consen 611 GKDGKVKQWDGEKFE----EIQKLDGHHSEVWCLAVSPNGS-FVVSSSHDKSIRLWERTDE 666 (888)
T ss_pred cCcceEEeechhhhh----hheeeccchheeeeeEEcCCCC-eEEeccCCceeEeeeccCc
Confidence 999999999988776 5789999999999999999999 8999999999999986654
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=350.60 Aligned_cols=463 Identities=15% Similarity=0.198 Sum_probs=364.4
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc----ccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA----WQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
+.+.|...-..+|-|+.||| +|+++|.|.. +.+.||....... +....++..+|-..|.++.|+.|.++|++|+
T Consensus 87 r~Vlh~f~fk~~v~~i~fSP-ng~~fav~~g-n~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gs 164 (893)
T KOG0291|consen 87 RSVLHRFNFKRGVGAIKFSP-NGKFFAVGCG-NLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGS 164 (893)
T ss_pred ceeeEEEeecCccceEEECC-CCcEEEEEec-ceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEecc
Confidence 34444335678999999999 9999999985 5899998775433 3445677889999999999999999999999
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC-----------------
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA----------------- 305 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~----------------- 305 (812)
.|-+.++|.++.. ..-..+.+.||++.|.++-|..+. ..+.+.+.||.+.+|.....
T Consensus 165 rD~s~rl~~v~~~-----k~~~~~~l~gHkd~VvacfF~~~~-~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~ 238 (893)
T KOG0291|consen 165 RDLSARLFGVDGN-----KNLFTYALNGHKDYVVACFFGANS-LDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDE 238 (893)
T ss_pred ccceEEEEEeccc-----cccceEeccCCCcceEEEEeccCc-ceEEEEecCceEEEEEecCCCcccccccccccccccc
Confidence 9999999999874 223467789999999999999987 78999999999999987611
Q ss_pred -------C-----cceec-cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 306 -------G-----AWQVD-QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 306 -------~-----~~~~~-~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
+ .|... ..-+......|++.+|++.-. +|++|-..|...+|.+. ....+..+ .....+|..+
T Consensus 239 ~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~-~lvvgFssG~f~LyelP---~f~lih~L-Sis~~~I~t~ 313 (893)
T KOG0291|consen 239 EMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTN-LLVVGFSSGEFGLYELP---DFNLIHSL-SISDQKILTV 313 (893)
T ss_pred cccccchhhhcceEEEEEEeeeecccccceeeeeccCCce-EEEEEecCCeeEEEecC---CceEEEEe-ecccceeeEE
Confidence 0 01111 111222336899999999776 89999999999999997 34445555 5566789999
Q ss_pred EEcCCCCEEEEEeCC-CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 373 SWNRTEPLIVSGGDD-GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 373 ~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+|+..|..||.|+.. |.+-||+.+ ....+...++|...+++++++|+| +++++|+.||.|++||...+-
T Consensus 314 ~~N~tGDWiA~g~~klgQLlVweWq---sEsYVlKQQgH~~~i~~l~YSpDg-q~iaTG~eDgKVKvWn~~Sgf------ 383 (893)
T KOG0291|consen 314 SFNSTGDWIAFGCSKLGQLLVWEWQ---SESYVLKQQGHSDRITSLAYSPDG-QLIATGAEDGKVKVWNTQSGF------ 383 (893)
T ss_pred EecccCCEEEEcCCccceEEEEEee---ccceeeeccccccceeeEEECCCC-cEEEeccCCCcEEEEeccCce------
Confidence 999999999998865 899999998 567788899999999999999997 799999999999999998873
Q ss_pred hhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 452 REAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
.......+...|+.+.|+..+..++.++-++.++.|+...-..-+ .+..+...+..+++..|. +.++
T Consensus 384 ----------C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfR-Tft~P~p~QfscvavD~s--GelV 450 (893)
T KOG0291|consen 384 ----------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFR-TFTSPEPIQFSCVAVDPS--GELV 450 (893)
T ss_pred ----------EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceee-eecCCCceeeeEEEEcCC--CCEE
Confidence 223333445689999999998655555556666777665544333 333444456778888888 6676
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
..+..+.-.+.+|.+ .+ ..+...+.+|.++|.+++|+|.+..|+++ |.|.
T Consensus 451 ~AG~~d~F~IfvWS~---qT-------------------------GqllDiLsGHEgPVs~l~f~~~~~~LaS~--SWDk 500 (893)
T KOG0291|consen 451 CAGAQDSFEIFVWSV---QT-------------------------GQLLDILSGHEGPVSGLSFSPDGSLLASG--SWDK 500 (893)
T ss_pred EeeccceEEEEEEEe---ec-------------------------CeeeehhcCCCCcceeeEEccccCeEEec--cccc
Confidence 666655433333333 22 33566889999999999999999999999 8999
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC---
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE--- 688 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~--- 688 (812)
+|++|++-..... ..++ .+...|++++|+| +|+-||++..||.|.+||+..
T Consensus 501 TVRiW~if~s~~~------------------------vEtl-~i~sdvl~vsfrP-dG~elaVaTldgqItf~d~~~~~q 554 (893)
T KOG0291|consen 501 TVRIWDIFSSSGT------------------------VETL-EIRSDVLAVSFRP-DGKELAVATLDGQITFFDIKEAVQ 554 (893)
T ss_pred eEEEEEeeccCce------------------------eeeE-eeccceeEEEEcC-CCCeEEEEEecceEEEEEhhhcee
Confidence 9999999876421 2222 3566899999999 899999999999999999975
Q ss_pred ---------------------------CceeEEEEecCCCCEEEeecCCCeEEEeecCCC
Q psy4510 689 ---------------------------AGAWSVYLYTNRFGVLATGDCKRNIHIWTPREA 721 (812)
Q Consensus 689 ---------------------------~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~ 721 (812)
++.++.+++|+||.+|.+|+....|+||++.++
T Consensus 555 ~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~ 614 (893)
T KOG0291|consen 555 VGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEG 614 (893)
T ss_pred eccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchh
Confidence 456677889999999999999999999998865
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-43 Score=356.88 Aligned_cols=496 Identities=17% Similarity=0.214 Sum_probs=375.0
Q ss_pred CCCeEEE-ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce
Q psy4510 188 EPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 188 ~~~~lat-~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
.|+++|. +.. .|.+||+.+++... ...+..-...|+|++-+|+.-+||.|..||.|+||+..++ .+..
T Consensus 33 ~Gr~va~~a~E--~vn~WdlRtge~~~--~l~~~~~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~-------~~~~ 101 (888)
T KOG0306|consen 33 KGRAVAVSALE--QVNIWDLRTGEIEK--KLILLKKKAEVTCLRSSDDILLLAVGYADGSVQIFSLESE-------EILI 101 (888)
T ss_pred CCcEEEEeccc--cEeEEeeecchhhh--hhhhhcccceEEEeeccCCcceEEEEecCceEEeeccCCC-------ceee
Confidence 6888877 444 79999999985321 1122344478999999999999999999999999999874 7889
Q ss_pred EEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
++.||...|+.+.|...| .+|++|+.|+.|.+||+-... ....+.||...|+..-|....+ ++++++.|+.|++
T Consensus 102 tfngHK~AVt~l~fd~~G-~rlaSGskDt~IIvwDlV~E~----Gl~rL~GHkd~iT~~~F~~~~~-~lvS~sKDs~iK~ 175 (888)
T KOG0306|consen 102 TFNGHKAAVTTLKFDKIG-TRLASGSKDTDIIVWDLVGEE----GLFRLRGHKDSITQALFLNGDS-FLVSVSKDSMIKF 175 (888)
T ss_pred eecccccceEEEEEcccC-ceEeecCCCccEEEEEeccce----eeEEeecchHHHhHHhccCCCe-EEEEeccCceEEE
Confidence 999999999999999999 899999999999999998776 5778999999999999988666 8999999999999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC----Cc-----eEE-cccCCCCEEE
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----SS-----VAT-FKHHTAPVTT 416 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----~~-----~~~-~~~h~~~v~~ 416 (812)
||+. +..|..+. -.|.+.+.++++.+ +.+++++.|+.+++|++...... .. ..+ .+...+....
T Consensus 176 WdL~---tqhCf~Th-vd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~ 249 (888)
T KOG0306|consen 176 WDLE---TQHCFETH-VDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREIN 249 (888)
T ss_pred Eecc---cceeeeEE-ecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeE
Confidence 9998 56777777 78999999999997 78999999999999999321111 11 111 1222344445
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhh------hhhc------cCCC----ce--EEeecCCCceeEEEE
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE------AELK------DLPS----QL--LFIHLGQKEIKELHW 478 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~~------~~~~----~~--~~~~~~~~~v~~~~~ 478 (812)
+...+++ ++|+.-+.|..+.++.+............ .... +... .+ +........|.+++|
T Consensus 250 l~~d~s~-r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv 328 (888)
T KOG0306|consen 250 LVTDFSD-RFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDV 328 (888)
T ss_pred EeecCcc-cEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEE
Confidence 5566665 68888899999999999876443221111 0000 0000 00 001112236888888
Q ss_pred cCCCCC--EEEEEeCCCeEEEEeCCCCCc-------ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccC
Q psy4510 479 HPQLPG--TIISTANSGFNIFRTISDLPS-------QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNL 549 (812)
Q Consensus 479 ~p~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l 549 (812)
-|.... .++..++..+..|........ ..+....|...|++++++.+ ..+++++.++ .+.+|+.
T Consensus 329 ~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d--~~~~~Sga~~-----SikiWn~ 401 (888)
T KOG0306|consen 329 TPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSD--SILLASGAGE-----SIKIWNR 401 (888)
T ss_pred EecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecC--ceeeeecCCC-----cEEEEEc
Confidence 876543 455556666666654331211 22445566779999999999 7777777663 3444442
Q ss_pred cccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcc
Q psy4510 550 TSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629 (812)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~ 629 (812)
.+.+ +.+++. .+.+.+..|.|.++++++| ...|.+.+||+.+..
T Consensus 402 ~t~k-------------------------ciRTi~--~~y~l~~~Fvpgd~~Iv~G--~k~Gel~vfdlaS~~------- 445 (888)
T KOG0306|consen 402 DTLK-------------------------CIRTIT--CGYILASKFVPGDRYIVLG--TKNGELQVFDLASAS------- 445 (888)
T ss_pred cCcc-------------------------eeEEec--cccEEEEEecCCCceEEEe--ccCCceEEEEeehhh-------
Confidence 2222 122222 2378889999999999999 899999999999886
Q ss_pred cccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC-----C---c-----------
Q psy4510 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-----A---G----------- 690 (812)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~-----~---~----------- 690 (812)
++.+.++|.+.+++++.+| |++.+++||.|++|++||..- | +
T Consensus 446 ------------------l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLe 506 (888)
T KOG0306|consen 446 ------------------LVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLE 506 (888)
T ss_pred ------------------hhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEe
Confidence 6677889999999999999 899999999999999999863 1 1
Q ss_pred ---eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 691 ---AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 691 ---~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
-+-++.+||||++||++--|.+|+||-+++-+ ..-.+.||.-+|.||..|||++ +++|||.|.+|+||-+.=
T Consensus 507 l~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlK----FflsLYGHkLPV~smDIS~DSk-livTgSADKnVKiWGLdF 581 (888)
T KOG0306|consen 507 LEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLK----FFLSLYGHKLPVLSMDISPDSK-LIVTGSADKNVKIWGLDF 581 (888)
T ss_pred ccccEEEEEEcCCCcEEEEEeccCeEEEEEeccee----eeeeecccccceeEEeccCCcC-eEEeccCCCceEEecccc
Confidence 12344689999999999999999999999987 5668999999999999999999 999999999999997664
Q ss_pred cc--eEEEE
Q psy4510 768 ML--YCFFV 774 (812)
Q Consensus 768 ~~--~~~~~ 774 (812)
|. +++|+
T Consensus 582 GDCHKS~fA 590 (888)
T KOG0306|consen 582 GDCHKSFFA 590 (888)
T ss_pred chhhhhhhc
Confidence 43 55555
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-44 Score=342.97 Aligned_cols=285 Identities=24% Similarity=0.380 Sum_probs=258.2
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC-CCCEEEEEeCCCcEE
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIH 298 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~-~~~~l~sg~~dg~i~ 298 (812)
.+-+.+|..+.||.+++.|+||+-+|.+++|+..+. ..+.+|.||.+.+.++.|+|. ....+|||+.||+++
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-------~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvk 244 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-------NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVK 244 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-------ceeEEEeccccceeeEEEccCCCccceeeeccCCcee
Confidence 356789999999999999999999999999999874 788999999999999999998 346899999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+|++.+.. .+..+.+|...|..++|+|+|+ +|+|++.|.+-++||+++ +..+... .+|...|.+|+|+++|
T Consensus 245 lw~~~~e~----~l~~l~gH~~RVs~VafHPsG~-~L~TasfD~tWRlWD~~t---k~ElL~Q-EGHs~~v~~iaf~~DG 315 (459)
T KOG0272|consen 245 LWKLSQET----PLQDLEGHLARVSRVAFHPSGK-FLGTASFDSTWRLWDLET---KSELLLQ-EGHSKGVFSIAFQPDG 315 (459)
T ss_pred eeccCCCc----chhhhhcchhhheeeeecCCCc-eeeecccccchhhccccc---chhhHhh-cccccccceeEecCCC
Confidence 99999876 7889999999999999999999 699999999999999995 3334444 8999999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
.++++||.|..-+|||+| ++..+..+.+|..+|.+|+|+|+| ..|||||.|++++|||++..+.
T Consensus 316 SL~~tGGlD~~~RvWDlR---tgr~im~L~gH~k~I~~V~fsPNG-y~lATgs~Dnt~kVWDLR~r~~------------ 379 (459)
T KOG0272|consen 316 SLAATGGLDSLGRVWDLR---TGRCIMFLAGHIKEILSVAFSPNG-YHLATGSSDNTCKVWDLRMRSE------------ 379 (459)
T ss_pred ceeeccCccchhheeecc---cCcEEEEecccccceeeEeECCCc-eEEeecCCCCcEEEeeeccccc------------
Confidence 999999999999999999 689999999999999999999997 7999999999999999986621
Q ss_pred CCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc
Q psy4510 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 538 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~ 538 (812)
T Consensus 380 -------------------------------------------------------------------------------- 379 (459)
T KOG0272|consen 380 -------------------------------------------------------------------------------- 379 (459)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEec-cCCeEEEEeecCcceEEEEe
Q psy4510 539 NIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ-YGSTTLAGVWGEVGKVGIWD 617 (812)
Q Consensus 539 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~g~~l~~~~~~~dg~I~iwd 617 (812)
...+.+|..-|+.+.|+| .|.+|+++ +.|++++||.
T Consensus 380 -----------------------------------------ly~ipAH~nlVS~Vk~~p~~g~fL~Ta--syD~t~kiWs 416 (459)
T KOG0272|consen 380 -----------------------------------------LYTIPAHSNLVSQVKYSPQEGYFLVTA--SYDNTVKIWS 416 (459)
T ss_pred -----------------------------------------ceecccccchhhheEecccCCeEEEEc--ccCcceeeec
Confidence 123456777888899998 67788888 8999999999
Q ss_pred ccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 618 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
-.+.. +++++.||.+.|.+++.++ ++..++|++.|+++|+|.
T Consensus 417 ~~~~~-------------------------~~ksLaGHe~kV~s~Dis~-d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 417 TRTWS-------------------------PLKSLAGHEGKVISLDISP-DSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCCcc-------------------------cchhhcCCccceEEEEecc-CCceEEEeccCceeeecc
Confidence 99887 8999999999999999999 889999999999999996
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=340.12 Aligned_cols=503 Identities=14% Similarity=0.149 Sum_probs=377.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+...|.+++.|| +|.+|++....|.+.+-++.... +..-...+.+|.|+.|||+|+++|.+. .+.+.||...
T Consensus 53 e~~~NI~~ialSp-~g~lllavdE~g~~~lvs~~~r~-----Vlh~f~fk~~v~~i~fSPng~~fav~~-gn~lqiw~~P 125 (893)
T KOG0291|consen 53 ETRYNITRIALSP-DGTLLLAVDERGRALLVSLLSRS-----VLHRFNFKRGVGAIKFSPNGKFFAVGC-GNLLQIWHAP 125 (893)
T ss_pred ecCCceEEEEeCC-CceEEEEEcCCCcEEEEecccce-----eeEEEeecCccceEEECCCCcEEEEEe-cceeEEEecC
Confidence 4667899999999 99999999988888877654432 111123467899999999999887764 5789999876
Q ss_pred CCCC-CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 254 RGKG-PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 254 ~~~~-~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
.... .-.+.....++.||-..|.++.|+.|. ++|++|+.|.++++|.++..+. .....+.+|...|-.+.|..+..
T Consensus 126 ~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DS-r~l~~gsrD~s~rl~~v~~~k~--~~~~~l~gHkd~VvacfF~~~~~ 202 (893)
T KOG0291|consen 126 GEIKNEFNPFVLHRTYLGHFDDITSIDWSDDS-RLLVTGSRDLSARLFGVDGNKN--LFTYALNGHKDYVVACFFGANSL 202 (893)
T ss_pred cchhcccCcceEeeeecCCccceeEEEeccCC-ceEEeccccceEEEEEeccccc--cceEeccCCCcceEEEEeccCcc
Confidence 5421 112334556788999999999999998 8999999999999999987763 23567899999999999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCc--------------------ccc-----e-----eecCCcCCCCeEEEEEcCCCCEEE
Q psy4510 333 RVLASCSVDLSIRIWDTRVINT--------------------KSC-----M-----LTLPNAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~--------------------~~~-----~-----~~~~~~~~~~v~~l~~~~~~~~l~ 382 (812)
. +.+.+.||.+.+|....... ... . +.+.......|++.+|++..++|+
T Consensus 203 ~-l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lv 281 (893)
T KOG0291|consen 203 D-LYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLV 281 (893)
T ss_pred e-EEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEE
Confidence 5 99999999999998761100 000 0 111123347899999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC-CCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA-DDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
+|-..|...+|.+. .-..++.+.-...+|..++|+..|. .||.|+. =|++.+|+....
T Consensus 282 vgFssG~f~LyelP---~f~lih~LSis~~~I~t~~~N~tGD-WiA~g~~klgQLlVweWqsE----------------- 340 (893)
T KOG0291|consen 282 VGFSSGEFGLYELP---DFNLIHSLSISDQKILTVSFNSTGD-WIAFGCSKLGQLLVWEWQSE----------------- 340 (893)
T ss_pred EEecCCeeEEEecC---CceEEEEeecccceeeEEEecccCC-EEEEcCCccceEEEEEeecc-----------------
Confidence 99999999999997 4567888887788999999999885 7777665 479999999887
Q ss_pred ceEEeec-CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceE
Q psy4510 462 QLLFIHL-GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540 (812)
Q Consensus 462 ~~~~~~~-~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~ 540 (812)
...+..+ +...+++++++|++..++.++.++.+.+|+..+..+.... ..|...++.+.|+..+..++.++-++....
T Consensus 341 sYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF--teHts~Vt~v~f~~~g~~llssSLDGtVRA 418 (893)
T KOG0291|consen 341 SYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF--TEHTSGVTAVQFTARGNVLLSSSLDGTVRA 418 (893)
T ss_pred ceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe--ccCCCceEEEEEEecCCEEEEeecCCeEEe
Confidence 3444444 4458999999999864444444556788888776555444 345669999999999644444444443222
Q ss_pred EEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc-eEEEEecc
Q psy4510 541 FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG-KVGIWDLK 619 (812)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg-~I~iwd~~ 619 (812)
+...+..+. .....+.+....+++..|.|..+++| +.|. .|.+|+++
T Consensus 419 wDlkRYrNf------------------------------RTft~P~p~QfscvavD~sGelV~AG--~~d~F~IfvWS~q 466 (893)
T KOG0291|consen 419 WDLKRYRNF------------------------------RTFTSPEPIQFSCVAVDPSGELVCAG--AQDSFEIFVWSVQ 466 (893)
T ss_pred eeeccccee------------------------------eeecCCCceeeeEEEEcCCCCEEEee--ccceEEEEEEEee
Confidence 222221110 11112223456789999999988887 5554 59999999
Q ss_pred ccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC--ce------
Q psy4510 620 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA--GA------ 691 (812)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~--~~------ 691 (812)
+++ ++-.+.||.++|.+++|+| .+..|||+|+|++||+||+-.. .+
T Consensus 467 TGq-------------------------llDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~ 520 (893)
T KOG0291|consen 467 TGQ-------------------------LLDILSGHEGPVSGLSFSP-DGSLLASGSWDKTVRIWDIFSSSGTVETLEIR 520 (893)
T ss_pred cCe-------------------------eeehhcCCCCcceeeEEcc-ccCeEEeccccceEEEEEeeccCceeeeEeec
Confidence 998 7888999999999999999 7889999999999999999763 22
Q ss_pred --eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcc------------cccccc----cCCCcceeEeEEecCCceeEEe
Q psy4510 692 --WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQ------------VDQKPL----VGHTNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 692 --~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~------------~~~~~~----~gH~~~V~~l~fs~dg~~~L~s 753 (812)
.....|+|||+-||+++-||.|.+||+..+...- .....+ .......+.|++|+||. ++++
T Consensus 521 sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~-~IlA 599 (893)
T KOG0291|consen 521 SDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGK-CILA 599 (893)
T ss_pred cceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCC-EEEe
Confidence 2234689999999999999999999988664310 000011 11234689999999999 8999
Q ss_pred eccCCceEEeeecCcc
Q psy4510 754 CSVDRSNRIGARRDML 769 (812)
Q Consensus 754 ~s~Dg~i~iWd~~~~~ 769 (812)
||..+.|+||+++.+-
T Consensus 600 gG~sn~iCiY~v~~~v 615 (893)
T KOG0291|consen 600 GGESNSICIYDVPEGV 615 (893)
T ss_pred cCCcccEEEEECchhh
Confidence 9999999999999876
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-43 Score=335.88 Aligned_cols=246 Identities=21% Similarity=0.379 Sum_probs=230.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCceEEee
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQLAEHN 251 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~i~vwd 251 (812)
|-..+|..+.||+ +++.||||+-+|.+++|+..+.. ...+|.+|+..|.++.|+|. +..||+|+.||++++|+
T Consensus 173 gd~rPis~~~fS~-ds~~laT~swsG~~kvW~~~~~~----~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~ 247 (459)
T KOG0272|consen 173 GDTRPISGCSFSR-DSKHLATGSWSGLVKVWSVPQCN----LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWK 247 (459)
T ss_pred cCCCcceeeEeec-CCCeEEEeecCCceeEeecCCcc----eeEEEeccccceeeEEEccCCCccceeeeccCCceeeec
Confidence 5668999999999 99999999999999999998875 78899999999999999998 56899999999999999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
+.+. .++..+.+|...|..++|+|+| .+|+|++.|.+-++||+.++. ......||...|.+++|.|+|
T Consensus 248 ~~~e-------~~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~----ElL~QEGHs~~v~~iaf~~DG 315 (459)
T KOG0272|consen 248 LSQE-------TPLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKS----ELLLQEGHSKGVFSIAFQPDG 315 (459)
T ss_pred cCCC-------cchhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccch----hhHhhcccccccceeEecCCC
Confidence 9874 8999999999999999999999 899999999999999999987 577788999999999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~ 411 (812)
. +++||+.|..-||||+| +..++..+ .+|...|.+++|+|+|..||||+.|++++|||+| ....+.++.+|.
T Consensus 316 S-L~~tGGlD~~~RvWDlR---tgr~im~L-~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR---~r~~ly~ipAH~ 387 (459)
T KOG0272|consen 316 S-LAATGGLDSLGRVWDLR---TGRCIMFL-AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLR---MRSELYTIPAHS 387 (459)
T ss_pred c-eeeccCccchhheeecc---cCcEEEEe-cccccceeeEeECCCceEEeecCCCCcEEEeeec---ccccceeccccc
Confidence 9 89999999999999999 56678877 7899999999999999999999999999999999 466799999999
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.-|+.|.|+|..+.+|+|++.|+++++|...+.
T Consensus 388 nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~ 420 (459)
T KOG0272|consen 388 NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW 420 (459)
T ss_pred chhhheEecccCCeEEEEcccCcceeeecCCCc
Confidence 999999999977789999999999999987766
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=297.95 Aligned_cols=294 Identities=21% Similarity=0.329 Sum_probs=256.6
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..++|++|.+.|.++.|++|+++|++++.||.+.|||.-+. ...+.+.-....|..++|+|.+ +++|+|+-|
T Consensus 47 ~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~Tt-------nK~haipl~s~WVMtCA~sPSg-~~VAcGGLd 118 (343)
T KOG0286|consen 47 TRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTT-------NKVHAIPLPSSWVMTCAYSPSG-NFVACGGLD 118 (343)
T ss_pred eEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccc-------cceeEEecCceeEEEEEECCCC-CeEEecCcC
Confidence 45789999999999999999999999999999999998874 5667777778999999999999 899999999
Q ss_pred CcEEEEeCCCC--CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREA--GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~--~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
+...||++.+. .......+.+.+|++.+.|+.|.+++. |+++|.|.++.+||+.+ .+.+..+ .+|.+.|.++
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~--ilT~SGD~TCalWDie~---g~~~~~f-~GH~gDV~sl 192 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH--ILTGSGDMTCALWDIET---GQQTQVF-HGHTGDVMSL 192 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc--eEecCCCceEEEEEccc---ceEEEEe-cCCcccEEEE
Confidence 99999999865 222234667899999999999999775 89999999999999994 4445666 8999999999
Q ss_pred EEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 373 SWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 373 ~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+++| +++.+++|+-|+..++||+| .+..+++|.+|...|.+|.|.|+| .-|++|+.|++.++||++..+..
T Consensus 193 sl~p~~~ntFvSg~cD~~aklWD~R---~~~c~qtF~ghesDINsv~ffP~G-~afatGSDD~tcRlyDlRaD~~~---- 264 (343)
T KOG0286|consen 193 SLSPSDGNTFVSGGCDKSAKLWDVR---SGQCVQTFEGHESDINSVRFFPSG-DAFATGSDDATCRLYDLRADQEL---- 264 (343)
T ss_pred ecCCCCCCeEEecccccceeeeecc---CcceeEeecccccccceEEEccCC-CeeeecCCCceeEEEeecCCcEE----
Confidence 9999 88999999999999999999 578999999999999999999998 68999999999999999987321
Q ss_pred hhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 452 REAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
... ++.
T Consensus 265 -------------a~y-------------------------------------------------------s~~------ 270 (343)
T KOG0286|consen 265 -------------AVY-------------------------------------------------------SHD------ 270 (343)
T ss_pred -------------eee-------------------------------------------------------ccC------
Confidence 000 000
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
.-..+|++++||..|++|++| ..|.
T Consensus 271 -----------------------------------------------------~~~~gitSv~FS~SGRlLfag--y~d~ 295 (343)
T KOG0286|consen 271 -----------------------------------------------------SIICGITSVAFSKSGRLLFAG--YDDF 295 (343)
T ss_pred -----------------------------------------------------cccCCceeEEEcccccEEEee--ecCC
Confidence 001278899999999999998 8999
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
.+.+||.-.++ .+..|.||.++|.++..+| +|..|+|||.|.++|||.
T Consensus 296 ~c~vWDtlk~e-------------------------~vg~L~GHeNRvScl~~s~-DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 296 TCNVWDTLKGE-------------------------RVGVLAGHENRVSCLGVSP-DGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ceeEeeccccc-------------------------eEEEeeccCCeeEEEEECC-CCcEEEecchhHheeecC
Confidence 99999998876 5778999999999999999 899999999999999994
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=294.53 Aligned_cols=264 Identities=19% Similarity=0.312 Sum_probs=229.1
Q ss_pred CCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEE
Q psy4510 161 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQT 240 (812)
Q Consensus 161 ~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s 240 (812)
.+++.++.-+.++||.+.|.++.|++ +.++|++++.||.+.|||.-+.. ...-+.-...+|..+||+|.|+++|+
T Consensus 40 ~~~i~~~~rr~LkGH~~Ki~~~~ws~-Dsr~ivSaSqDGklIvWDs~Ttn----K~haipl~s~WVMtCA~sPSg~~VAc 114 (343)
T KOG0286|consen 40 VGRIQMRTRRTLKGHLNKIYAMDWST-DSRRIVSASQDGKLIVWDSFTTN----KVHAIPLPSSWVMTCAYSPSGNFVAC 114 (343)
T ss_pred ceeeeeeeEEEecccccceeeeEecC-CcCeEEeeccCCeEEEEEccccc----ceeEEecCceeEEEEEECCCCCeEEe
Confidence 35566667788999999999999999 99999999999999999988776 34445566789999999999999999
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 320 (812)
|+-|+...||++.+..... ..+....+.+|++-+.++.|-++ +.|+||+.|.+..+||++++. ....|.+|.+
T Consensus 115 GGLdN~Csiy~ls~~d~~g-~~~v~r~l~gHtgylScC~f~dD--~~ilT~SGD~TCalWDie~g~----~~~~f~GH~g 187 (343)
T KOG0286|consen 115 GGLDNKCSIYPLSTRDAEG-NVRVSRELAGHTGYLSCCRFLDD--NHILTGSGDMTCALWDIETGQ----QTQVFHGHTG 187 (343)
T ss_pred cCcCceeEEEecccccccc-cceeeeeecCccceeEEEEEcCC--CceEecCCCceEEEEEcccce----EEEEecCCcc
Confidence 9999999999998642111 12445678999999999999996 689999999999999999998 6788999999
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
.|.++.++|...+.|++|+.|+..++||+| ...+..++ .+|...|++++|.|+|.-|++|++|++.++||+| .
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R---~~~c~qtF-~ghesDINsv~ffP~G~afatGSDD~tcRlyDlR---a 260 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVR---SGQCVQTF-EGHESDINSVRFFPSGDAFATGSDDATCRLYDLR---A 260 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeecc---CcceeEee-cccccccceEEEccCCCeeeecCCCceeEEEeec---C
Confidence 999999999444479999999999999999 56788888 8999999999999999999999999999999999 4
Q ss_pred CCceEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+.+..+.. -..+|++++|+..| ++|++|..|.++.+||.-..
T Consensus 261 D~~~a~ys~~~~~~gitSv~FS~SG-RlLfagy~d~~c~vWDtlk~ 305 (343)
T KOG0286|consen 261 DQELAVYSHDSIICGITSVAFSKSG-RLLFAGYDDFTCNVWDTLKG 305 (343)
T ss_pred CcEEeeeccCcccCCceeEEEcccc-cEEEeeecCCceeEeecccc
Confidence 566666653 24689999999987 69999999999999997544
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=301.61 Aligned_cols=335 Identities=19% Similarity=0.278 Sum_probs=281.7
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
..++..|..|++.|++++.+| +.+++||||.|..-+||++.++. ....+.+|+..|+++.||.+|.+||+|+.+|
T Consensus 54 DdS~~tF~~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge----~~~eltgHKDSVt~~~FshdgtlLATGdmsG 128 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGE----FAGELTGHKDSVTCCSFSHDGTLLATGDMSG 128 (399)
T ss_pred ccceeehhhcCCceEEEEeCC-CCceEEecCCCceEEEEEccCCc----ceeEecCCCCceEEEEEccCceEEEecCCCc
Confidence 456777889999999999999 99999999999999999999988 6788999999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|+||...++ .....+...-..+.-|.|+|.+ .+|+.|+.||.|.+|.+.+.. ..+.+.||..++++-
T Consensus 129 ~v~v~~~stg-------~~~~~~~~e~~dieWl~WHp~a-~illAG~~DGsvWmw~ip~~~----~~kv~~Gh~~~ct~G 196 (399)
T KOG0296|consen 129 KVLVFKVSTG-------GEQWKLDQEVEDIEWLKWHPRA-HILLAGSTDGSVWMWQIPSQA----LCKVMSGHNSPCTCG 196 (399)
T ss_pred cEEEEEcccC-------ceEEEeecccCceEEEEecccc-cEEEeecCCCcEEEEECCCcc----eeeEecCCCCCcccc
Confidence 9999999986 4555565666789999999988 899999999999999999875 678899999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
.|.|+|++ ++++..||+|++|++.+ ..++..+.........++.++..+..++.|..++.+++-... .++.+.
T Consensus 197 ~f~pdGKr-~~tgy~dgti~~Wn~kt---g~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~---sgKVv~ 269 (399)
T KOG0296|consen 197 EFIPDGKR-ILTGYDDGTIIVWNPKT---GQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNG---SGKVVN 269 (399)
T ss_pred cccCCCce-EEEEecCceEEEEecCC---CceeEEecccccCcCCccccccccceeEeccCCccEEEEccc---cceEEE
Confidence 99999995 99999999999999995 455666655556678899999999999999999998888775 344444
Q ss_pred Ecc--------cCCCCEEEEEEccCCC--cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 406 TFK--------HHTAPVTTVEWHPTES--STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 406 ~~~--------~h~~~v~~v~~~p~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
... .+...+.+|.+.|... .+.|+|+-||+|.|||+...+.
T Consensus 270 ~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~----------------------------- 320 (399)
T KOG0296|consen 270 CNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTL----------------------------- 320 (399)
T ss_pred ecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchh-----------------------------
Confidence 444 3455555665555322 3778899999999999976521
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 476 LHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
T Consensus 321 -------------------------------------------------------------------------------- 320 (399)
T KOG0296|consen 321 -------------------------------------------------------------------------------- 320 (399)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN 635 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 635 (812)
+..-.|...|..+.|-+ ..+|+++ ..+|.|++||.+++.
T Consensus 321 -------------------------R~~c~he~~V~~l~w~~-t~~l~t~--c~~g~v~~wDaRtG~------------- 359 (399)
T KOG0296|consen 321 -------------------------RHICEHEDGVTKLKWLN-TDYLLTA--CANGKVRQWDARTGQ------------- 359 (399)
T ss_pred -------------------------heeccCCCceEEEEEcC-cchheee--ccCceEEeeeccccc-------------
Confidence 01122334577777777 6678888 689999999999998
Q ss_pred cccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 636 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
++.++.||...|.+++++| +.++++|+|.|++.+|+.+.
T Consensus 360 ------------l~~~y~GH~~~Il~f~ls~-~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 360 ------------LKFTYTGHQMGILDFALSP-QKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ------------eEEEEecCchheeEEEEcC-CCcEEEEecCCCeEEEEecC
Confidence 8899999999999999999 88999999999999999864
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=308.12 Aligned_cols=337 Identities=22% Similarity=0.405 Sum_probs=282.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccc------cCC----CCCCeeeeeEcCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP------LGG----HTNSAEDLQWSDLK 235 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~------l~~----h~~~V~~l~~s~~~ 235 (812)
......+ +|..+|++++|+|....++|+|+.|-..++|++.........+.. ..+ -+..|++|+|+.+|
T Consensus 169 ~~~~kvl-~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G 247 (524)
T KOG0273|consen 169 SSKAKVL-RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDG 247 (524)
T ss_pred ccceeec-cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCC
Confidence 3445555 599999999999955559999999999999998752111001111 112 23579999999999
Q ss_pred CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc
Q psy4510 236 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 236 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 315 (812)
..||+|+.+|.+++|+... ..+.++.-|+++|++|.|+..| .+|++++.|+++.+||..++. ..+.+
T Consensus 248 ~~LatG~~~G~~riw~~~G--------~l~~tl~~HkgPI~slKWnk~G-~yilS~~vD~ttilwd~~~g~----~~q~f 314 (524)
T KOG0273|consen 248 TLLATGSEDGEARIWNKDG--------NLISTLGQHKGPIFSLKWNKKG-TYILSGGVDGTTILWDAHTGT----VKQQF 314 (524)
T ss_pred CeEEEeecCcEEEEEecCc--------hhhhhhhccCCceEEEEEcCCC-CEEEeccCCccEEEEeccCce----EEEee
Confidence 9999999999999999876 6788899999999999999999 899999999999999998887 56667
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.-|..+-.++.|-.+.. |++++.||.|+++.+. ...++.++ .+|.+.|+++.|+|.+.+|++++.|++++||.+
T Consensus 315 ~~~s~~~lDVdW~~~~~--F~ts~td~~i~V~kv~---~~~P~~t~-~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~ 388 (524)
T KOG0273|consen 315 EFHSAPALDVDWQSNDE--FATSSTDGCIHVCKVG---EDRPVKTF-IGHHGEVNALKWNPTGSLLASCSDDGTLKIWSM 388 (524)
T ss_pred eeccCCccceEEecCce--EeecCCCceEEEEEec---CCCcceee-ecccCceEEEEECCCCceEEEecCCCeeEeeec
Confidence 77888888999988775 9999999999999998 55667777 679999999999999999999999999999998
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCC--------cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTES--------STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (812)
. .......+..|...|..+.|+|.|+ ..+++++.|++|++||+..+.+
T Consensus 389 ~---~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~--------------------- 444 (524)
T KOG0273|consen 389 G---QSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVP--------------------- 444 (524)
T ss_pred C---CCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCce---------------------
Confidence 7 4678889999999999999999753 4789999999999999876621
Q ss_pred cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecc
Q psy4510 468 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMS 547 (812)
Q Consensus 468 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~ 547 (812)
T Consensus 445 -------------------------------------------------------------------------------- 444 (524)
T KOG0273|consen 445 -------------------------------------------------------------------------------- 444 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCC
Q psy4510 548 NLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDD 627 (812)
Q Consensus 548 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~ 627 (812)
...+..|..+|++++|||+|+++++| +-||.|.||+.++++
T Consensus 445 --------------------------------i~~f~kH~~pVysvafS~~g~ylAsG--s~dg~V~iws~~~~~----- 485 (524)
T KOG0273|consen 445 --------------------------------IHTLMKHQEPVYSVAFSPNGRYLASG--SLDGCVHIWSTKTGK----- 485 (524)
T ss_pred --------------------------------eEeeccCCCceEEEEecCCCcEEEec--CCCCeeEeccccchh-----
Confidence 12345677799999999999999999 899999999999987
Q ss_pred cccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 628 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
+++.+++ .+.|..|+|+. ++..|..+-.|+.+++-|+.
T Consensus 486 --------------------l~~s~~~-~~~Ifel~Wn~-~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 486 --------------------LVKSYQG-TGGIFELCWNA-AGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred --------------------eeEeecC-CCeEEEEEEcC-CCCEEEEEecCCCceEEEec
Confidence 5555554 45699999999 67788888888888887763
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=307.55 Aligned_cols=469 Identities=18% Similarity=0.244 Sum_probs=342.6
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|..+|-++.|+| ....+.++-.+|.|.||+.++.. ..+.+.-..-+|++..|-+..+++++|+.|..|+||+..
T Consensus 11 ~rSdRVKsVd~HP-tePw~la~LynG~V~IWnyetqt----mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 11 SRSDRVKSVDFHP-TEPWILAALYNGDVQIWNYETQT----MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN 85 (794)
T ss_pred ccCCceeeeecCC-CCceEEEeeecCeeEEEecccce----eeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence 5889999999999 88888888889999999999876 778888889999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
++ ..+.+|..|.+-|.+++.+|.. -+++|++.|-+|++||.+..-. +.+.+.||+..|.+++|+|...+
T Consensus 86 t~-------ekV~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~~wa---~~qtfeGH~HyVMqv~fnPkD~n 154 (794)
T KOG0276|consen 86 TG-------EKVKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWENEWA---CEQTFEGHEHYVMQVAFNPKDPN 154 (794)
T ss_pred cc-------eeeEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccCcee---eeeEEcCcceEEEEEEecCCCcc
Confidence 86 8899999999999999999998 5899999999999999987543 67899999999999999999988
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEecCCCCCCCceEEcccCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE--PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~ 411 (812)
-||||+-|++|++|.+. +..+..++ .+|...|+|+.+-+.| ++|++|++|.+|+|||.. +..+++++.+|.
T Consensus 155 tFaS~sLDrTVKVWslg---s~~~nfTl-~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ---tk~CV~TLeGHt 227 (794)
T KOG0276|consen 155 TFASASLDRTVKVWSLG---SPHPNFTL-EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ---TKSCVQTLEGHT 227 (794)
T ss_pred ceeeeeccccEEEEEcC---CCCCceee-eccccCcceEEeccCCCcceEEecCCCceEEEeecc---hHHHHHHhhccc
Confidence 99999999999999998 55667888 7999999999999876 499999999999999998 578999999999
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..|..+.|+|.-+ ++++|+.||+++||+..+.+... ...-+-.++.+++-.+.. +.++.+.+
T Consensus 228 ~Nvs~v~fhp~lp-iiisgsEDGTvriWhs~Ty~lE~----------------tLn~gleRvW~I~~~k~~-~~i~vG~D 289 (794)
T KOG0276|consen 228 NNVSFVFFHPELP-IIISGSEDGTVRIWNSKTYKLEK----------------TLNYGLERVWCIAAHKGD-GKIAVGFD 289 (794)
T ss_pred ccceEEEecCCCc-EEEEecCCccEEEecCcceehhh----------------hhhcCCceEEEEeecCCC-CeEEEecc
Confidence 9999999999875 99999999999999998875321 112234578888888876 45777777
Q ss_pred CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccc--ccccccccccccCCCCC
Q psy4510 492 SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTST--EEDNERELEDDESEGSG 569 (812)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 569 (812)
.+..++......|... .++. +.++-+..... ....+..+... ..+++..
T Consensus 290 eg~i~v~lgreeP~vs--------------Md~~--gKIiwa~~~ei---~~~~~ks~~~~~ev~DgErL---------- 340 (794)
T KOG0276|consen 290 EGSVTVKLGREEPAVS--------------MDSN--GKIIWAVHSEI---QAVNLKSVGAQKEVTDGERL---------- 340 (794)
T ss_pred CCcEEEEccCCCCcee--------------ecCC--ccEEEEcCcee---eeeeceeccCcccccCCccc----------
Confidence 7777776555433322 2222 32222222211 11111110000 0000000
Q ss_pred CccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCe
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL 649 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (812)
+.....+-.-.-..-.++.+|+|++++++ .||.-.||..-.-.
T Consensus 341 -------~LsvKeLgs~eiyPq~L~hsPNGrfV~Vc---gdGEyiIyTala~R--------------------------- 383 (794)
T KOG0276|consen 341 -------PLSVKELGSVEIYPQTLAHSPNGRFVVVC---GDGEYIIYTALALR--------------------------- 383 (794)
T ss_pred -------cchhhhccccccchHHhccCCCCcEEEEe---cCccEEEEEeeehh---------------------------
Confidence 00000000000112247789999988886 58888888744322
Q ss_pred eeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---eEEE--EecCCCCEEEeecCCCeEEEeecCCCCCc
Q psy4510 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---WSVY--LYTNRFGVLATGDCKRNIHIWTPREAGAW 724 (812)
Q Consensus 650 ~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---~~~~--~~s~dg~~lasgs~dg~i~iwd~~~~~~~ 724 (812)
..+-+......|++ ++...|.--.++.|+++ .+.+. ++.. +-.--|..|...-.++.+++||..++.
T Consensus 384 ---nK~fG~~~eFvw~~-dsne~avRes~~~vki~--knfke~ksi~~~~~~e~i~gg~Llg~~ss~~~~fydW~~~~-- 455 (794)
T KOG0276|consen 384 ---NKAFGSGLEFVWAA-DSNEFAVRESNGNVKIF--KNFKEHKSIRPDMSAEGIFGGPLLGVRSSDFLCFYDWESGE-- 455 (794)
T ss_pred ---hcccccceeEEEcC-CCCeEEEEecCCceEEE--ecceeccccccccceeeecCCceEEEEeCCeEEEEEcccce--
Confidence 11335677889999 77788888888888888 33222 1111 111112344444456679999999887
Q ss_pred ccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 725 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 725 ~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
+++.+.- ....|.|+.+|. +++.|+.| .-.|..
T Consensus 456 --lVrrI~v---~~k~v~w~d~g~-lVai~~d~-Sfyil~ 488 (794)
T KOG0276|consen 456 --LVRRIEV---TSKHVYWSDNGE-LVAIAGDD-SFYILK 488 (794)
T ss_pred --EEEEEee---ccceeEEecCCC-EEEEEecC-ceeEEE
Confidence 4444421 234689999998 55555544 444444
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=309.15 Aligned_cols=514 Identities=16% Similarity=0.178 Sum_probs=358.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEe--cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC--CCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD--PFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~--~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~--d~~i~v 249 (812)
.|..+++|++||| +|+++||| |....+++|++.... .+..+..|+..|+|++|+|.++++++.+. |-.|.+
T Consensus 76 ssRk~~t~vAfS~-~GryvatGEcG~~pa~kVw~la~h~----vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv 150 (1080)
T KOG1408|consen 76 SSRKPLTCVAFSQ-NGRYVATGECGRTPASKVWSLAFHG----VVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNV 150 (1080)
T ss_pred ccCcceeEEEEcC-CCcEEEecccCCCccceeeeecccc----chhhhhhccccceeeeecCCCcEEEeeccccceEEEh
Confidence 4567899999999 99999998 578889999999877 67889999999999999999999998874 445777
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC------------
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG------------ 317 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~------------ 317 (812)
|+.+.. . ...-..-...|.+++|+.++ .++++.+. ..|++|.++.+.+... ..++.+
T Consensus 151 ~dWr~N-------~-~~asnkiss~Vsav~fsEdg-SYfvT~gn-rHvk~wyl~~~~Kykd-piPl~gRs~~lg~lr~n~ 219 (1080)
T KOG1408|consen 151 NDWRVN-------S-SGASNKISSVVSAVAFSEDG-SYFVTSGN-RHVKLWYLQIQSKYKD-PIPLPGRSYFLGNLRFNE 219 (1080)
T ss_pred hhhhhc-------c-cccccccceeEEEEEEccCC-ceeeeeee-eeEEEEEeeccccccC-Cccccchhhhccccccch
Confidence 877652 1 11111234678999999999 78888875 8999999876652110 000100
Q ss_pred ----------------------C-----------------CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce
Q psy4510 318 ----------------------H-----------------TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358 (812)
Q Consensus 318 ----------------------h-----------------~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 358 (812)
| +...+||+.+ .+ ++++|+.+|.|++|+..+..- +
T Consensus 220 f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs--~r-~I~cgCa~g~vrlFnp~tL~y---~ 293 (1080)
T KOG1408|consen 220 FLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVS--SR-LIACGCAKGMVRLFNPETLDY---A 293 (1080)
T ss_pred hhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeee--cc-eEEEeeccceeeecCcchhhh---c
Confidence 0 1112334433 33 799999999999998764221 1
Q ss_pred eecCC-----------------------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 359 LTLPN-----------------------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 359 ~~~~~-----------------------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
.+++. +.-...-++.|.+....|.+...|..|+|||+|..+.......+-.|...|+
T Consensus 294 ~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW 373 (1080)
T KOG1408|consen 294 GTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIW 373 (1080)
T ss_pred cccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceee
Confidence 11111 1112345678999888999999999999999998665556677788999999
Q ss_pred EEEEccCC----------CcEEEEEECCCCEEEEEcCCCCchhH---HHhhhhhcc------------------CCCceE
Q psy4510 416 TVEWHPTE----------SSTFASGGADDQIALWDLAVERDSEI---EQREAELKD------------------LPSQLL 464 (812)
Q Consensus 416 ~v~~~p~~----------~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~------------------~~~~~~ 464 (812)
.+.--|.+ +..|++++.|++|++||+........ ......+.. ......
T Consensus 374 ~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~ 453 (1080)
T KOG1408|consen 374 DVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALV 453 (1080)
T ss_pred eeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccch
Confidence 98876621 23689999999999999987332111 000011111 111112
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC-CCCeEEEeeCCCceEEEE
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ-LPGTIISTANSGFNIFRT 543 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~-~~~~~i~~~~~~~~~~~~ 543 (812)
....+...+.+++.+|++..+..+-..+.+++|...+.. ...+...|...|.++.++-- ....++++++.+ ..+.+
T Consensus 454 s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~--~~~~~eAHesEilcLeyS~p~~~~kLLASasrd-RlIHV 530 (1080)
T KOG1408|consen 454 STCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELE--YTCFMEAHESEILCLEYSFPVLTNKLLASASRD-RLIHV 530 (1080)
T ss_pred hhcCcccceEEEEECCCcceecccCccCceEEEEehhhh--hhhheecccceeEEEeecCchhhhHhhhhccCC-ceEEE
Confidence 222334479999999998654444445567888765542 33445567789999998753 334555555543 22233
Q ss_pred eecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccC--CeEEEEeecCcceEEEEecccc
Q psy4510 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYG--STTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g--~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
+... .+..+.+.+.+|...|+++.|...| ..++++ +.|..|.+--.+..
T Consensus 531 ~Dv~---------------------------rny~l~qtld~HSssITsvKFa~~gln~~Misc--GADksimFr~~qk~ 581 (1080)
T KOG1408|consen 531 YDVK---------------------------RNYDLVQTLDGHSSSITSVKFACNGLNRKMISC--GADKSIMFRVNQKA 581 (1080)
T ss_pred Eecc---------------------------cccchhhhhcccccceeEEEEeecCCceEEEec--cCchhhheehhccc
Confidence 3222 1344677889999999999998877 566666 78887764322211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE------
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY------ 695 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~------ 695 (812)
... ..+ +-.+-.-....++.++..| ..+++++++.|+.|+||++++|+.....
T Consensus 582 ~~g----~~f----------------~r~t~t~~ktTlYDm~Vdp-~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~ 640 (1080)
T KOG1408|consen 582 SSG----RLF----------------PRHTQTLSKTTLYDMAVDP-TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDH 640 (1080)
T ss_pred cCc----eec----------------cccccccccceEEEeeeCC-CcceEEEEecccceEEEeccccceeeeecccccC
Confidence 100 000 0000011124788999999 7889999999999999999986554322
Q ss_pred -------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 696 -------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 696 -------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
...|.|.|||+...|+++.++|.-+++ ++....||...|+.|.|++|-+ .|+|++.||.|.||.+..
T Consensus 641 eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgE----cvA~m~GHsE~VTG~kF~nDCk-HlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 641 EGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGE----CVAQMTGHSEAVTGVKFLNDCK-HLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred CCceEEEEECCCccEEEEeecCCceEEEEeccch----hhhhhcCcchheeeeeecccch-hheeecCCceEEEEECch
Confidence 357899999999999999999999998 5889999999999999999999 899999999999998653
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=280.59 Aligned_cols=304 Identities=23% Similarity=0.423 Sum_probs=251.1
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
.+..++||.++++.++|+|..|.+|||||.|+.|+||+..++.........-.+|+..|+.+||+|.|++|++++-|.++
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~ 85 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV 85 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence 45566799999999999993389999999999999999987444333333346899999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
.||.-..+ ..+++.++.||..+|.+++|+++| ++||+++.|+.|.||.+...... .+...+..|+..|..+.|
T Consensus 86 ~Iw~k~~~-----efecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEf-ec~aVL~~HtqDVK~V~W 158 (312)
T KOG0645|consen 86 VIWKKEDG-----EFECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEF-ECIAVLQEHTQDVKHVIW 158 (312)
T ss_pred EEeecCCC-----ceeEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcE-EEEeeeccccccccEEEE
Confidence 99998876 578899999999999999999999 89999999999999999866543 356788999999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
+|... +|+++|.|.+|++|.-.....-.++.++ .+|...|.+++|++.|..|++++.|++++||-+.. . + -
T Consensus 159 HPt~d-lL~S~SYDnTIk~~~~~~dddW~c~~tl-~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~---~--~--~ 229 (312)
T KOG0645|consen 159 HPTED-LLFSCSYDNTIKVYRDEDDDDWECVQTL-DGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT---D--L--S 229 (312)
T ss_pred cCCcc-eeEEeccCCeEEEEeecCCCCeeEEEEe-cCccceEEEEEecCCCceEEEecCCcceEeeeecc---C--c--c
Confidence 99988 8999999999999987755567788888 89999999999999999999999999999998752 1 1 1
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
..|+.++..+.|. ++ .|++++.|+.|+++.-........ ........+.+...|+++.|+|..+.+++
T Consensus 230 ~~~sr~~Y~v~W~-~~--~IaS~ggD~~i~lf~~s~~~d~p~---------~~l~~~~~~aHe~dVNsV~w~p~~~~~L~ 297 (312)
T KOG0645|consen 230 GMHSRALYDVPWD-NG--VIASGGGDDAIRLFKESDSPDEPS---------WNLLAKKEGAHEVDVNSVQWNPKVSNRLA 297 (312)
T ss_pred hhcccceEeeeec-cc--ceEeccCCCEEEEEEecCCCCCch---------HHHHHhhhcccccccceEEEcCCCCCcee
Confidence 2378899999999 43 899999999999998764311100 00001112233458999999998789999
Q ss_pred EEeCCCeEEEEe
Q psy4510 488 STANSGFNIFRT 499 (812)
Q Consensus 488 ~~~~~~~~~~~~ 499 (812)
++++||..-++.
T Consensus 298 s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 298 SGGDDGIVNFWE 309 (312)
T ss_pred ecCCCceEEEEE
Confidence 999999765553
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=308.12 Aligned_cols=502 Identities=17% Similarity=0.160 Sum_probs=361.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+.+.|.|++- +..++.+|.. ..|.+|..... .......|...|.-+. +-|.+++++..++.+.||+..
T Consensus 74 ~lp~~I~alas---~~~~vy~A~g-~~i~~~~rgk~-----i~~~~~~~~a~v~~l~--~fGe~lia~d~~~~l~vw~~s 142 (910)
T KOG1539|consen 74 PLPDKITALAS---DKDYVYVASG-NKIYAYARGKH-----IRHTTLLHGAKVHLLL--PFGEHLIAVDISNILFVWKTS 142 (910)
T ss_pred CCCCceEEEEe---cCceEEEecC-cEEEEEEccce-----EEEEeccccceEEEEe--eecceEEEEEccCcEEEEEec
Confidence 46688999983 5566666654 46888843321 4456677777777766 779999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.+..+. ...+..++...+.|+++.--+.--+.++.|+.+|.+++|++++++ ....+.++...|+++.=+|-=.
T Consensus 143 ~~~~e~--~l~~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K----~v~~f~~~~s~IT~ieqsPaLD- 215 (910)
T KOG1539|consen 143 SIQEEL--YLQSTFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGK----VVYTFQEFFSRITAIEQSPALD- 215 (910)
T ss_pred cccccc--cccceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccCc----EEEEecccccceeEeccCCcce-
Confidence 741110 011122233333477775433333569999999999999999998 6888999999999999999877
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceE-EcccCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHT 411 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~ 411 (812)
++|.|..+|+|.+++++ ..+.+.++.. ..+.|++++|..||+ ++++|+..|.+.+||+.. .+.+. ....|.
T Consensus 216 VVaiG~~~G~ViifNlK---~dkil~sFk~-d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~---kkl~~v~~nah~ 288 (910)
T KOG1539|consen 216 VVAIGLENGTVIIFNLK---FDKILMSFKQ-DWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEK---KKLINVTRNAHY 288 (910)
T ss_pred EEEEeccCceEEEEEcc---cCcEEEEEEc-cccceeEEEeccCCCeeEEeccCCceEEEEEcCC---Ceeeeeeecccc
Confidence 89999999999999999 4556677722 258999999999997 888898899999999984 33333 344799
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec-CCCceeEEEEcCCCCCEEEEEe
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL-GQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
+.|+...|.|.. -++++++.|+.+++|=..++. ..|.++.... +..+..++.|.-.....+.+.+
T Consensus 289 ~sv~~~~fl~~e-pVl~ta~~DnSlk~~vfD~~d-------------g~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~ 354 (910)
T KOG1539|consen 289 GSVTGATFLPGE-PVLVTAGADNSLKVWVFDSGD-------------GVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAK 354 (910)
T ss_pred CCcccceecCCC-ceEeeccCCCceeEEEeeCCC-------------CcchheeeccCCCCCchheeeeccCcEEEEecc
Confidence 999999999976 499999999999999877552 2234444444 4457888999866556777777
Q ss_pred CCC-eEEEEeCCCCCcccEEe----------------ecCCCCeeEEEEcCCC--CCeEEEeeCCCceEEEEeecccCcc
Q psy4510 491 NSG-FNIFRTISDLPSQLLFI----------------HLGQKEIKELHWHPQL--PGTIISTANSGFNIFRTISMSNLTS 551 (812)
Q Consensus 491 ~~~-~~~~~~~~~~~~~~~~~----------------~~~~~~i~~~~~~p~~--~~~~i~~~~~~~~~~~~~~~~~l~~ 551 (812)
.|+ ++.|........+.+-. ...-.+|..+++.-.. .+.-+.++..+....+.|.+.+-..
T Consensus 355 ~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~ 434 (910)
T KOG1539|consen 355 QDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTS 434 (910)
T ss_pred cCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCccc
Confidence 766 55554433222111111 0111345555443321 1111112222222233333333111
Q ss_pred cccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccc
Q psy4510 552 TEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQL 631 (812)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~ 631 (812)
+.. .+. ...+......+++++.++.|++.+.| ...|.|-+|+++++.
T Consensus 435 G~~----~L~------------------~~~~~~~~~~~~av~vs~CGNF~~IG--~S~G~Id~fNmQSGi--------- 481 (910)
T KOG1539|consen 435 GRH----VLD------------------PKRFKKDDINATAVCVSFCGNFVFIG--YSKGTIDRFNMQSGI--------- 481 (910)
T ss_pred ccE----Eec------------------CccccccCcceEEEEEeccCceEEEe--ccCCeEEEEEcccCe---------
Confidence 110 000 00112234688999999999999999 789999999999986
Q ss_pred cccccccCCCCCCCCCCeeee---cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc---------eeEEEEecC
Q psy4510 632 AEHNKKRGKGPGIPTPPLFSF---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---------AWSVYLYTN 699 (812)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~---~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~---------~~~~~~~s~ 699 (812)
...++ ..|.++|++++... -++.++|++.+|.+++||..+.. ......++.
T Consensus 482 ----------------~r~sf~~~~ah~~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr 544 (910)
T KOG1539|consen 482 ----------------HRKSFGDSPAHKGEVTGLAVDG-TNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHR 544 (910)
T ss_pred ----------------eecccccCccccCceeEEEecC-CCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeee
Confidence 22333 58999999999988 67899999999999999998743 334455677
Q ss_pred CCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 700 RFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 700 dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
....+|.+..|-.|+++|..+.+ .++.|.||++.|++++|||||+ +|++++.|++||+||+-.+.
T Consensus 545 ~s~l~a~~~ddf~I~vvD~~t~k----vvR~f~gh~nritd~~FS~Dgr-WlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 545 VSDLLAIALDDFSIRVVDVVTRK----VVREFWGHGNRITDMTFSPDGR-WLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred hhhhhhhhcCceeEEEEEchhhh----hhHHhhccccceeeeEeCCCCc-EEEEeecCCcEEEEeccCcc
Confidence 77899999999999999999887 6889999999999999999999 99999999999999998775
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=277.53 Aligned_cols=301 Identities=18% Similarity=0.309 Sum_probs=242.5
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....+.||.+.|+.++..+.+.++|.+++.|.++.+|++..... ....++.+.||...|..++.+++|++.++++.|+.
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence 34466799999999999997788999999999999999987532 33467889999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC--CCCCEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG--HTNSVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~--h~~~v~~ 324 (812)
+++||+.++ ++.+.|.||...|.+++|+|++ ..+++|+.|++|++|++.... ...... +.+.|+|
T Consensus 87 lrlWDl~~g-------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTiklwnt~g~c-----k~t~~~~~~~~WVsc 153 (315)
T KOG0279|consen 87 LRLWDLATG-------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTIKLWNTLGVC-----KYTIHEDSHREWVSC 153 (315)
T ss_pred EEEEEecCC-------cEEEEEEecCCceEEEEecCCC-ceeecCCCcceeeeeeecccE-----EEEEecCCCcCcEEE
Confidence 999999986 8889999999999999999998 899999999999999987664 222222 3789999
Q ss_pred EEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 325 LQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 325 ~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
++|+|+. ..+|++++.|++|++||+++. + +.....+|.+.++.++++|+|.++++|+.||.+.+||++. ++.
T Consensus 154 vrfsP~~~~p~Ivs~s~DktvKvWnl~~~---~-l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~---~k~ 226 (315)
T KOG0279|consen 154 VRFSPNESNPIIVSASWDKTVKVWNLRNC---Q-LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE---GKN 226 (315)
T ss_pred EEEcCCCCCcEEEEccCCceEEEEccCCc---c-hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC---Cce
Confidence 9999994 337999999999999999843 2 3333378999999999999999999999999999999994 556
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
+..+. |...|.+++|+|+. +.+++..+..|+|||+...........+.. . . ....+.....+++|++++.
T Consensus 227 lysl~-a~~~v~sl~fspnr--ywL~~at~~sIkIwdl~~~~~v~~l~~d~~----g-~--s~~~~~~~clslaws~dG~ 296 (315)
T KOG0279|consen 227 LYSLE-AFDIVNSLCFSPNR--YWLCAATATSIKIWDLESKAVVEELKLDGI----G-P--SSKAGDPICLSLAWSADGQ 296 (315)
T ss_pred eEecc-CCCeEeeEEecCCc--eeEeeccCCceEEEeccchhhhhhcccccc----c-c--ccccCCcEEEEEEEcCCCc
Confidence 66665 78899999999984 444444456699999998864322111100 0 0 1112223467889999997
Q ss_pred CEEEEEeCCCeEEEE
Q psy4510 484 GTIISTANSGFNIFR 498 (812)
Q Consensus 484 ~~~~~~~~~~~~~~~ 498 (812)
.++..-.++.+++|.
T Consensus 297 tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 297 TLFAGYTDNVIRVWQ 311 (315)
T ss_pred EEEeeecCCcEEEEE
Confidence 777777777777764
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=272.04 Aligned_cols=298 Identities=16% Similarity=0.302 Sum_probs=256.4
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
..-+|||+|.|.+||+|...++. +.++++.....|..+...|+++.||+++. ..||+||+.++ ...|+.+
T Consensus 9 ~~viLvsA~YDhTIRfWqa~tG~----C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~-----np~Pv~t 78 (311)
T KOG0315|consen 9 DPVILVSAGYDHTIRFWQALTGI----CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSN-----NPNPVAT 78 (311)
T ss_pred CceEEEeccCcceeeeeehhcCe----EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCC-----CCCceeE
Confidence 44689999999999999999988 78888888899999999999999998865 56999999997 4569999
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+.+|++.|.++.|..+| +.+++|+.||+++|||++... .++.+ .|.++|+++..+|+... |++|..+|.|++|
T Consensus 79 ~e~h~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~----~qR~~-~~~spVn~vvlhpnQte-Lis~dqsg~irvW 151 (311)
T KOG0315|consen 79 FEGHTKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLS----CQRNY-QHNSPVNTVVLHPNQTE-LISGDQSGNIRVW 151 (311)
T ss_pred EeccCCceEEEEEeecC-eEEEecCCCceEEEEeccCcc----cchhc-cCCCCcceEEecCCcce-EEeecCCCcEEEE
Confidence 99999999999999999 899999999999999999865 44444 47799999999999885 9999999999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC---CCCceEEcccCCCCEEEEEEccCCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK---KGSSVATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~ 424 (812)
|++. ..|...+...-...|.+++..|+|.+++.+...|...+|++-... .-.++..++.|.+.|+.+.+||++
T Consensus 152 Dl~~---~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~- 227 (311)
T KOG0315|consen 152 DLGE---NSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDV- 227 (311)
T ss_pred EccC---CccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCC-
Confidence 9984 334444445566889999999999999999999999999997522 235677899999999999999997
Q ss_pred cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCC
Q psy4510 425 STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLP 504 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 504 (812)
.+|+++|.|.+++||+....-
T Consensus 228 k~lat~ssdktv~iwn~~~~~----------------------------------------------------------- 248 (311)
T KOG0315|consen 228 KYLATCSSDKTVKIWNTDDFF----------------------------------------------------------- 248 (311)
T ss_pred cEEEeecCCceEEEEecCCce-----------------------------------------------------------
Confidence 699999999999999976430
Q ss_pred cccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe
Q psy4510 505 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI 584 (812)
Q Consensus 505 ~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (812)
.+...+.
T Consensus 249 -------------------------------------------------------------------------kle~~l~ 255 (311)
T KOG0315|consen 249 -------------------------------------------------------------------------KLELVLT 255 (311)
T ss_pred -------------------------------------------------------------------------eeEEEee
Confidence 0123455
Q ss_pred cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEe
Q psy4510 585 RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 664 (812)
Q Consensus 585 ~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~ 664 (812)
+|...+...+||.+|.+|++| +.|+.+++|++..++ .+....||.....|++.
T Consensus 256 gh~rWvWdc~FS~dg~YlvTa--ssd~~~rlW~~~~~k-------------------------~v~qy~gh~K~~vc~~l 308 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTA--SSDHTARLWDLSAGK-------------------------EVRQYQGHHKAAVCVAL 308 (311)
T ss_pred cCCceEEeeeeccCccEEEec--CCCCceeecccccCc-------------------------eeeecCCcccccEEEEe
Confidence 667789999999999999999 899999999999987 57778999988888876
Q ss_pred C
Q psy4510 665 S 665 (812)
Q Consensus 665 s 665 (812)
.
T Consensus 309 n 309 (311)
T KOG0315|consen 309 N 309 (311)
T ss_pred e
Confidence 4
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=308.36 Aligned_cols=487 Identities=17% Similarity=0.227 Sum_probs=338.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
..+.+|-.++|+| ....+.|+-..|.|++||..-+. ++..+..|.++|+.++|+|.+..+++|+.|..|+||+.+
T Consensus 7 skSsRvKglsFHP-~rPwILtslHsG~IQlWDYRM~t----li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHP-KRPWILTSLHSGVIQLWDYRMGT----LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred cccccccceecCC-CCCEEEEeecCceeeeehhhhhh----HHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence 3457888999999 99999999999999999998776 788899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.. ++++++.||.+-|..+.|++.- -.++|+|.|.+|+||+..+.. ++..++||...|.|.+|+|.+.
T Consensus 82 ~r-------rclftL~GHlDYVRt~~FHhey-PWIlSASDDQTIrIWNwqsr~----~iavltGHnHYVMcAqFhptED- 148 (1202)
T KOG0292|consen 82 TR-------RCLFTLLGHLDYVRTVFFHHEY-PWILSASDDQTIRIWNWQSRK----CIAVLTGHNHYVMCAQFHPTED- 148 (1202)
T ss_pred cc-------eehhhhccccceeEEeeccCCC-ceEEEccCCCeEEEEeccCCc----eEEEEecCceEEEeeccCCccc-
Confidence 85 9999999999999999999988 589999999999999999998 7889999999999999999888
Q ss_pred EEEEEECCCeEEEEECCCCCc-------------------------ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINT-------------------------KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~-------------------------~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
+++|+|-|.+||+||+..... ...+..+..+|...|+-++|+|.-++|++|++|.
T Consensus 149 lIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDR 228 (1202)
T KOG0292|consen 149 LIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDR 228 (1202)
T ss_pred eEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcc
Confidence 799999999999999853111 1123334478999999999999999999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
.|++|.+...+ .-.+-+.++|...|.++-|+|.. .++++.|.|++|++||+.... .+.....
T Consensus 229 qVKlWrmnetK-aWEvDtcrgH~nnVssvlfhp~q-~lIlSnsEDksirVwDm~kRt----------------~v~tfrr 290 (1202)
T KOG0292|consen 229 QVKLWRMNETK-AWEVDTCRGHYNNVSSVLFHPHQ-DLILSNSEDKSIRVWDMTKRT----------------SVQTFRR 290 (1202)
T ss_pred eeeEEEecccc-ceeehhhhcccCCcceEEecCcc-ceeEecCCCccEEEEeccccc----------------ceeeeec
Confidence 99999997532 34567889999999999999985 699999999999999998774 2233333
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN 548 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 548 (812)
.+.+...++-||.. .+++++-++|+.+|+.....+...+ +-+ +++..- +.. ++.+.+.
T Consensus 291 endRFW~laahP~l-NLfAAgHDsGm~VFkleRErpa~~v--------------~~n--~LfYvk-d~~---i~~~d~~- 348 (1202)
T KOG0292|consen 291 ENDRFWILAAHPEL-NLFAAGHDSGMIVFKLERERPAYAV--------------NGN--GLFYVK-DRF---IRSYDLR- 348 (1202)
T ss_pred cCCeEEEEEecCCc-ceeeeecCCceEEEEEcccCceEEE--------------cCC--EEEEEc-cce---EEeeecc-
Confidence 45678999999987 5888888899999987665443221 111 111111 110 1111111
Q ss_pred CcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCc
Q psy4510 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDP 628 (812)
Q Consensus 549 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~ 628 (812)
+.....-. ..+.......+..++.++|....++.++--+.|.-.++.+........
T Consensus 349 --t~~d~~v~--------------------~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~~~~~~-- 404 (1202)
T KOG0292|consen 349 --TQKDTAVA--------------------SLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKDSDGVS-- 404 (1202)
T ss_pred --ccccceeE--------------------eccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCcccccC--
Confidence 10000000 000011112467788899877666555433556666666655421100
Q ss_pred ccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc--------eeEEEEecCC
Q psy4510 629 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--------AWSVYLYTNR 700 (812)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~--------~~~~~~~s~d 700 (812)
......++ .-..+.|-. .+++.+---.+..+.+=++.+.. ...-+|+...
T Consensus 405 ------------------~~~~~~k~---tG~~a~fva-rNrfavl~k~~~~v~ik~l~N~vtkkl~~~~~~~~IF~ag~ 462 (1202)
T KOG0292|consen 405 ------------------DGKDVKKG---TGEGALFVA-RNRFAVLDKSNEQVVIKNLKNKVTKKLLLPESTDDIFYAGT 462 (1202)
T ss_pred ------------------CchhhhcC---CCCceEEEE-ecceEEEEecCcceEEecccchhhhcccCcccccceeeccC
Confidence 00001111 111122222 12222222224455555554411 1223455566
Q ss_pred CCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEE
Q psy4510 701 FGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFV 774 (812)
Q Consensus 701 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~ 774 (812)
|.+|+.. ...|.++|++..+. +..-....|.-+.||+|+. .+|--| -.+|.|.+-+-...|.+.
T Consensus 463 g~lll~~--~~~v~lfdvQq~~~------~~si~~s~vkyvvws~dm~-~vAll~-Kh~i~i~~kkL~l~~sih 526 (1202)
T KOG0292|consen 463 GNLLLRS--PDSVTLFDVQQKKK------VGSIKVSKVKYVVWSNDMS-RVALLS-KHTITIADKKLELLCSIH 526 (1202)
T ss_pred ccEEEEc--CCeEEEEEeecceE------EEEEecCceeEEEEcCccc-hhhhcc-cceEEEEecchhheecch
Confidence 6655543 45688999876653 2222346788899999988 344333 456777776554444444
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=300.32 Aligned_cols=284 Identities=24% Similarity=0.398 Sum_probs=249.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
-.|..+.|.| +|+.|+||+..|.+.+|+..+-. ....++.|..+|+++.|++++.++++|+.+|.|++|+..-
T Consensus 97 c~V~~v~WtP-eGRRLltgs~SGEFtLWNg~~fn----FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-- 169 (464)
T KOG0284|consen 97 CPVNVVRWTP-EGRRLLTGSQSGEFTLWNGTSFN----FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM-- 169 (464)
T ss_pred cceeeEEEcC-CCceeEeecccccEEEecCceee----HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch--
Confidence 4689999999 99999999999999999874432 4556789999999999999999999999999999999765
Q ss_pred CCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 257 GPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
..+..+.+|. ..|.+++|+|.. ..+++++.||+|+|||..... ....+.||.-.|.+++|+|... ++
T Consensus 170 ------nnVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~k----ee~vL~GHgwdVksvdWHP~kg-Li 237 (464)
T KOG0284|consen 170 ------NNVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPK----EERVLRGHGWDVKSVDWHPTKG-LI 237 (464)
T ss_pred ------hhhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCc----hhheeccCCCCcceeccCCccc-ee
Confidence 4556666665 899999999977 899999999999999998876 4667799999999999999988 89
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+++|.|..|++||.+ +..|+.++ ..|...|..+.|++++++|++++.|..++++|+| ..+.+.++++|+..|+
T Consensus 238 asgskDnlVKlWDpr---Sg~cl~tl-h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR---~mkEl~~~r~Hkkdv~ 310 (464)
T KOG0284|consen 238 ASGSKDNLVKLWDPR---SGSCLATL-HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIR---TMKELFTYRGHKKDVT 310 (464)
T ss_pred EEccCCceeEeecCC---Ccchhhhh-hhccceEEEEEEcCCCCeeEEccCCceEEEEehh---HhHHHHHhhcchhhhe
Confidence 999999999999999 67788888 8999999999999999999999999999999999 4677999999999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
++.|+|-.+.+|.+|+.||.|..|.+..... .....+.+...|.+++|||-+ .++++++.+...
T Consensus 311 ~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p---------------~~~i~~AHd~~iwsl~~hPlG-hil~tgsnd~t~ 374 (464)
T KOG0284|consen 311 SLTWHPLNESLFTSGGSDGSVVHWVVGLEEP---------------LGEIPPAHDGEIWSLAYHPLG-HILATGSNDRTV 374 (464)
T ss_pred eeccccccccceeeccCCCceEEEecccccc---------------ccCCCcccccceeeeeccccc-eeEeecCCCcce
Confidence 9999999999999999999999999985432 223344556789999999997 578888888888
Q ss_pred EEEeCCC
Q psy4510 496 IFRTISD 502 (812)
Q Consensus 496 ~~~~~~~ 502 (812)
.||....
T Consensus 375 rfw~r~r 381 (464)
T KOG0284|consen 375 RFWTRNR 381 (464)
T ss_pred eeeccCC
Confidence 8877654
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=273.91 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=218.8
Q ss_pred cccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC 293 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~ 293 (812)
...++.+|++.|++++..+.+ ..|++++.|..+.+|++... ......+++.++||...|..+..++++ ++.++++.
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~d--d~~~G~~~r~~~GHsH~v~dv~~s~dg-~~alS~sw 83 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSD--DIKYGVPVRRLTGHSHFVSDVVLSSDG-NFALSASW 83 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccC--ccccCceeeeeeccceEecceEEccCC-ceEEeccc
Confidence 456789999999999998874 57788999999999999775 233457889999999999999999999 89999999
Q ss_pred CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc-CCCCeEEE
Q psy4510 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA-HTSDVNVI 372 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~l 372 (812)
|+++++||+.++. ..+.|.+|...|.+++|+|+.+ .+++|+.|.+|++|++- ..|..++... +...|+|+
T Consensus 84 D~~lrlWDl~~g~----~t~~f~GH~~dVlsva~s~dn~-qivSGSrDkTiklwnt~----g~ck~t~~~~~~~~WVscv 154 (315)
T KOG0279|consen 84 DGTLRLWDLATGE----STRRFVGHTKDVLSVAFSTDNR-QIVSGSRDKTIKLWNTL----GVCKYTIHEDSHREWVSCV 154 (315)
T ss_pred cceEEEEEecCCc----EEEEEEecCCceEEEEecCCCc-eeecCCCcceeeeeeec----ccEEEEEecCCCcCcEEEE
Confidence 9999999999986 6788999999999999999999 49999999999999986 4455555333 38899999
Q ss_pred EEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 373 SWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 373 ~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
.|+|+ ..+|++++.|++|++||+++ .+....+.+|++.++.++++|+| .++++|+.||.+.+||++..
T Consensus 155 rfsP~~~~p~Ivs~s~DktvKvWnl~~---~~l~~~~~gh~~~v~t~~vSpDG-slcasGgkdg~~~LwdL~~~------ 224 (315)
T KOG0279|consen 155 RFSPNESNPIIVSASWDKTVKVWNLRN---CQLRTTFIGHSGYVNTVTVSPDG-SLCASGGKDGEAMLWDLNEG------ 224 (315)
T ss_pred EEcCCCCCcEEEEccCCceEEEEccCC---cchhhccccccccEEEEEECCCC-CEEecCCCCceEEEEEccCC------
Confidence 99998 56999999999999999994 56778899999999999999998 69999999999999999988
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
..+....+...|.+++|+|+..++.++++. .+.||+....
T Consensus 225 -----------k~lysl~a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~ 264 (315)
T KOG0279|consen 225 -----------KNLYSLEAFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESK 264 (315)
T ss_pred -----------ceeEeccCCCeEeeEEecCCceeEeeccCC-ceEEEeccch
Confidence 456666667789999999998655555544 5788876554
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=279.10 Aligned_cols=489 Identities=17% Similarity=0.202 Sum_probs=348.9
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCC--------cEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCc
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--------NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTA 237 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg--------~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~ 237 (812)
.-+|+.||...|.|++.+| +.-++|+|-.-| .|+|||..+-. .+..+......|.|++||+. |.+
T Consensus 96 ~Qr~y~GH~ddikc~~vHP-dri~vatGQ~ag~~g~~~~phvriWdsv~L~----TL~V~g~f~~GV~~vaFsk~~~G~~ 170 (626)
T KOG2106|consen 96 SQRHYLGHNDDIKCMAVHP-DRIRVATGQGAGTSGRPLQPHVRIWDSVTLS----TLHVIGFFDRGVTCVAFSKINGGSL 170 (626)
T ss_pred hcccccCCCCceEEEeecC-CceeeccCcccccCCCcCCCeeeecccccce----eeeeeccccccceeeeecccCCCce
Confidence 4456669999999999999 999999885444 59999976655 44555677789999999975 456
Q ss_pred EEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc
Q psy4510 238 LQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 238 l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 315 (812)
|...+ .+..+.|||.+.+ ......+.-...|....|+|.+++++++.+. |.+.+|+++.+.... .+..+
T Consensus 171 l~~vD~s~~h~lSVWdWqk~-------~~~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k-~~~~f 241 (626)
T KOG2106|consen 171 LCAVDDSNPHMLSVWDWQKK-------AKLGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVK-RQGIF 241 (626)
T ss_pred EEEecCCCccccchhhchhh-------hccCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEE-Eeecc
Confidence 65554 5677999999875 3333344446778999999999888988885 899999998876321 22333
Q ss_pred cCC-CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy4510 316 VGH-TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394 (812)
Q Consensus 316 ~~h-~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd 394 (812)
..+ ...|.|++|.++|. +++|..+|.|.||+.++ ....... .+|.+.|.+++.-.+|.+|- |+.|..|..||
T Consensus 242 ek~ekk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~---~~~~k~~-~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd 314 (626)
T KOG2106|consen 242 EKREKKFVLCVTFLENGD--VITGDSGGNILIWSKGT---NRISKQV-HAHDGGVFSLCMLRDGTLLS-GGKDRKIILWD 314 (626)
T ss_pred ccccceEEEEEEEcCCCC--EEeecCCceEEEEeCCC---ceEEeEe-eecCCceEEEEEecCccEee-cCccceEEecc
Confidence 333 36899999999998 89999999999999974 3334445 49999999999999996554 99999999999
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
- +.++.+ -..++...++|..|+=. ++. |+.|...+.|..=.+...- .+....+.....
T Consensus 315 ~-~y~k~r-~~elPe~~G~iRtv~e~--~~d-i~vGTtrN~iL~Gt~~~~f-----------------~~~v~gh~delw 372 (626)
T KOG2106|consen 315 D-NYRKLR-ETELPEQFGPIRTVAEG--KGD-ILVGTTRNFILQGTLENGF-----------------TLTVQGHGDELW 372 (626)
T ss_pred c-cccccc-cccCchhcCCeeEEecC--CCc-EEEeeccceEEEeeecCCc-----------------eEEEEeccccee
Confidence 3 222222 22345567788877643 333 7777777777666665552 222333334789
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
.++.+|..+.++.++.+..+.+|+ ..++.....-..+..++.|+|. + .++.+.... .+-++....
T Consensus 373 gla~hps~~q~~T~gqdk~v~lW~-----~~k~~wt~~~~d~~~~~~fhps--g-~va~Gt~~G-~w~V~d~e~------ 437 (626)
T KOG2106|consen 373 GLATHPSKNQLLTCGQDKHVRLWN-----DHKLEWTKIIEDPAECADFHPS--G-VVAVGTATG-RWFVLDTET------ 437 (626)
T ss_pred eEEcCCChhheeeccCcceEEEcc-----CCceeEEEEecCceeEeeccCc--c-eEEEeeccc-eEEEEeccc------
Confidence 999999986554444444556665 2344444444568899999999 4 333332211 112222111
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 634 (812)
.. ......-...++.++|+|+|.++++| +.|+.|+||.+....+.
T Consensus 438 ----------------------~~-lv~~~~d~~~ls~v~ysp~G~~lAvg--s~d~~iyiy~Vs~~g~~---------- 482 (626)
T KOG2106|consen 438 ----------------------QD-LVTIHTDNEQLSVVRYSPDGAFLAVG--SHDNHIYIYRVSANGRK---------- 482 (626)
T ss_pred ----------------------ce-eEEEEecCCceEEEEEcCCCCEEEEe--cCCCeEEEEEECCCCcE----------
Confidence 01 11222236789999999999999999 89999999999876532
Q ss_pred ccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC--------------------------
Q psy4510 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-------------------------- 688 (812)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~-------------------------- 688 (812)
....-+-|..+|+.+.||+ |+++|.+-+.|-.|..|....
T Consensus 483 -------------y~r~~k~~gs~ithLDwS~-Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~ 548 (626)
T KOG2106|consen 483 -------------YSRVGKCSGSPITHLDWSS-DSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGG 548 (626)
T ss_pred -------------EEEeeeecCceeEEeeecC-CCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecc
Confidence 1111122337999999999 899999999999999995443
Q ss_pred --CceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 689 --AGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 689 --~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+..+.+.+-+...+++|+|.+.|+|++|...-... +.....+.+|.+.|++++|+.+.. +|.+.+.|.+|..|++
T Consensus 549 s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~-rA~~he~~ghs~~vt~V~Fl~~d~-~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 549 SDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSP-RAPSHEYGGHSSHVTNVAFLCKDS-HLISTGKDTSIMQWRL 625 (626)
T ss_pred cCCchHHHhhhhhhhhhhhccccCceEEEEccccCCC-cccceeeccccceeEEEEEeeCCc-eEEecCCCceEEEEEe
Confidence 11222334566778999999999999998765432 224567899999999999999998 7888889999999986
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=297.69 Aligned_cols=541 Identities=14% Similarity=0.199 Sum_probs=366.1
Q ss_pred CCccCcCCCCCceEEEEeCCCCCC---eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPG---VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~---~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
..+..+.||.++|+|+.|-| +.. .+++|+.||+|.+|.+... ......++.+|...+.|+ ........+...
T Consensus 45 ~i~t~l~GH~a~VnC~~~l~-~s~~~a~~vsG~sD~~v~lW~l~~~--~~~~i~~~~g~~~~~~cv--~a~~~~~~~~~a 119 (764)
T KOG1063|consen 45 LIVTTLDGHVARVNCVHWLP-TSEIVAEMVSGDSDGRVILWKLRDE--YLIKIYTIQGHCKECVCV--VARSSVMTCKAA 119 (764)
T ss_pred eeEEeccCCccceEEEEEcc-cccccceEEEccCCCcEEEEEEeeh--heEEEEeecCcceeEEEE--EeeeeEEEeecc
Confidence 35566779999999999999 666 8999999999999998822 233566777766555554 444444444478
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcE--EEEEecCC-CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG--FAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v--~~l~~sp~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 320 (812)
|+.+.+|+.+.. ..-+...++-..+.+ .|+++.|+ +.-+++.|+.+..|.++.-...+ ......+.||.+
T Consensus 120 d~~v~vw~~~~~-----e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~--f~~v~el~GH~D 192 (764)
T KOG1063|consen 120 DGTVSVWDKQQD-----EVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADS--FARVAELEGHTD 192 (764)
T ss_pred CceEEEeecCCC-----ceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcc--eeEEEEeeccch
Confidence 999999999543 111233333333333 35566663 33457788888888888766332 224677899999
Q ss_pred CEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcc------------------cc---ee------ecCCcCCCCeEE
Q psy4510 321 SVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTK------------------SC---ML------TLPNAHTSDVNV 371 (812)
Q Consensus 321 ~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~------------------~~---~~------~~~~~~~~~v~~ 371 (812)
.|.+++|...+. .+|+|+|.|..||||.+.-.... .+ +. .+..+|...|++
T Consensus 193 WIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~s 272 (764)
T KOG1063|consen 193 WIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYS 272 (764)
T ss_pred hhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEE
Confidence 999999987554 68999999999999987533200 01 11 333689999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCC-----ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS-----SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 372 l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
+.|+|.+..|++++.|.++.+|...... +- .+..+.+..+...+..|+|++ +.+++-+.-|..++|-......
T Consensus 273 v~W~p~~~~LLSASaDksmiiW~pd~~t-GiWv~~vRlGe~gg~a~GF~g~lw~~n~-~~ii~~g~~Gg~hlWkt~d~~~ 350 (764)
T KOG1063|consen 273 VWWHPEGLDLLSASADKSMIIWKPDENT-GIWVDVVRLGEVGGSAGGFWGGLWSPNS-NVIIAHGRTGGFHLWKTKDKTF 350 (764)
T ss_pred EEEccchhhheecccCcceEEEecCCcc-ceEEEEEEeecccccccceeeEEEcCCC-CEEEEecccCcEEEEeccCccc
Confidence 9999999999999999999999886421 11 122333445678999999986 6888889999999998222110
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc--ccEEeecCCCCeeEEEEcC
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS--QLLFIHLGQKEIKELHWHP 524 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~p 524 (812)
=.+..+...+-..|++++|+|.+..++.++.+-..++|-....... .+-....|.-.++++++-+
T Consensus 351 -------------w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn 417 (764)
T KOG1063|consen 351 -------------WTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVN 417 (764)
T ss_pred -------------eeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehcc
Confidence 0033344445568999999999986666665556677755521111 1111122334778888887
Q ss_pred CCCCeEEEeeCCCceEEEEeeccc--------Ccc-----------cc------cccccccccccCCCCC----Ccc---
Q psy4510 525 QLPGTIISTANSGFNIFRTISMSN--------LTS-----------TE------EDNERELEDDESEGSG----DED--- 572 (812)
Q Consensus 525 ~~~~~~i~~~~~~~~~~~~~~~~~--------l~~-----------~~------~~~~~~~~~~~~~~~~----~~~--- 572 (812)
. +..++++++.. +++++.... +.. +. ..+...+......+.. .+.
T Consensus 418 ~-~~~FVSgAdEK--VlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~ 494 (764)
T KOG1063|consen 418 E-DLQFVSGADEK--VLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLA 494 (764)
T ss_pred C-Cceeeecccce--eeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccc
Confidence 4 37777777664 333332221 000 00 0000000000000000 000
Q ss_pred ----------------ccCCCccceEEecccceEEEEEEeccCCeEEEEeecC---cceEEEEeccccccccCCcccccc
Q psy4510 573 ----------------RRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE---VGKVGIWDLKTALQTVDDPFQLAE 633 (812)
Q Consensus 573 ----------------~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~---dg~I~iwd~~~~~~~~~~~~~~~~ 633 (812)
+.....-...+.+|...|++++.+|+|+.++++|-+. ...|++|+..+-.
T Consensus 495 ~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~----------- 563 (764)
T KOG1063|consen 495 AAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWL----------- 563 (764)
T ss_pred cCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchh-----------
Confidence 0001112344678999999999999999999987543 3349999998876
Q ss_pred cccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC--------------CceeEEEEecC
Q psy4510 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE--------------AGAWSVYLYTN 699 (812)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~--------------~~~~~~~~~s~ 699 (812)
..+.+.+|+-.|+.++||| ++++|+++|.|+++.+|.... .+++=.+-++|
T Consensus 564 --------------~~~~L~~HsLTVT~l~FSp-dg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~p 628 (764)
T KOG1063|consen 564 --------------QVQELEGHSLTVTRLAFSP-DGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSP 628 (764)
T ss_pred --------------hhheecccceEEEEEEECC-CCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCc
Confidence 4567899999999999999 899999999999999999865 22333445899
Q ss_pred CCCEEEeecCCCeEEEeecCCC--CCcccccc-cccCCCcceeEeEEecCC----ceeEEeeccCCceEEeeec
Q psy4510 700 RFGVLATGDCKRNIHIWTPREA--GAWQVDQK-PLVGHTNSVEDLQWSPGE----KRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 700 dg~~lasgs~dg~i~iwd~~~~--~~~~~~~~-~~~gH~~~V~~l~fs~dg----~~~L~s~s~Dg~i~iWd~~ 766 (812)
++.++||+|.|++|++|..... +. ..+ ....+..+|++++|.|-. ..+++.|-.-|.|.||...
T Consensus 629 de~~FaTaSRDK~VkVW~~~~~~d~~---i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 629 DEKYFATASRDKKVKVWEEPDLRDKY---ISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred ccceeEEecCCceEEEEeccCchhhh---hhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 9999999999999999998877 33 122 456688899999998642 2256777789999999965
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=297.14 Aligned_cols=528 Identities=16% Similarity=0.219 Sum_probs=360.7
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC---cEEEeeCCCceEEeeCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT---ALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~---~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..|.| +..+|.|. ...|.+||..+.. ....+.||..+|+|+.|-|..+ ++++|+.|+.|++|.+...
T Consensus 20 ~sw~~--~~~vafGa-~~~Iav~dp~k~~----i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~--- 89 (764)
T KOG1063|consen 20 SSWGP--GGLVAFGA-GPAIAVADPEKIL----IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDE--- 89 (764)
T ss_pred ccccc--cceEEecC-CceEEEeCcccce----eEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeeh---
Confidence 34434 44555555 4689999987753 6778999999999999999888 8999999999999999843
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC-CCCeEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLAS 337 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s 337 (812)
....+.++.+|...+.|+.=.+ ....+...|+++.+|+.+..+........+....--..|+++.| ++..+++.
T Consensus 90 --~~~~i~~~~g~~~~~~cv~a~~---~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~ 164 (764)
T KOG1063|consen 90 --YLIKIYTIQGHCKECVCVVARS---SVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLAC 164 (764)
T ss_pred --heEEEEeecCcceeEEEEEeee---eEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEe
Confidence 4577888888887777665433 22333368999999999544311111111111122335666666 45556777
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCC-------------
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKG------------- 401 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~------------- 401 (812)
|+.+..|.++.-.. ..-..+..+ .+|...|.+++|...+. +|++++.|..||||.+.-....
T Consensus 165 Ggs~~~v~~~s~~~-d~f~~v~el-~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~ 242 (764)
T KOG1063|consen 165 GGSKFVVDLYSSSA-DSFARVAEL-EGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLS 242 (764)
T ss_pred cCcceEEEEeccCC-cceeEEEEe-eccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCcccccccccccccc
Confidence 77788888887652 234455666 89999999999998664 8999999999999988632200
Q ss_pred -----Cce----------EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 402 -----SSV----------ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 402 -----~~~----------~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
..+ ..+.+|.+.|.++.|+|.+ ..|++++.|.++.+|.-......- ...+...
T Consensus 243 ~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~-~~LLSASaDksmiiW~pd~~tGiW-----------v~~vRlG 310 (764)
T KOG1063|consen 243 NLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEG-LDLLSASADKSMIIWKPDENTGIW-----------VDVVRLG 310 (764)
T ss_pred CCceeeeeeeEEEEEehhhhhcCcccceEEEEEccch-hhheecccCcceEEEecCCccceE-----------EEEEEee
Confidence 011 1234899999999999987 689999999999999876552110 0011112
Q ss_pred ecC--CCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCC-CcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEE
Q psy4510 467 HLG--QKEIKELHWHPQLPGTIISTANSGFNIFRTISDL-PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543 (812)
Q Consensus 467 ~~~--~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~ 543 (812)
..+ ........|+|++..+++.+-.+++.+|++.... -.+......+-..|.+++|+|.+..++.++.+....++..
T Consensus 311 e~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~ 390 (764)
T KOG1063|consen 311 EVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFAR 390 (764)
T ss_pred cccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecc
Confidence 222 2248899999998767777778889999843322 2344455666789999999999754444444443333333
Q ss_pred eecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc-
Q psy4510 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL- 622 (812)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~- 622 (812)
+ +.... | --....+.|...++|++|-+....+++| .+...+|+|+.....
T Consensus 391 w-------g~q~~----w----------------HEiaRPQiHGyDl~c~~~vn~~~~FVSg--AdEKVlRvF~aPk~fv 441 (764)
T KOG1063|consen 391 W-------GRQQE----W----------------HEIARPQIHGYDLTCLSFVNEDLQFVSG--ADEKVLRVFEAPKSFV 441 (764)
T ss_pred c-------ccccc----e----------------eeecccccccccceeeehccCCceeeec--ccceeeeeecCcHHHH
Confidence 2 01000 1 0122345577789999998865566776 788889999875321
Q ss_pred ---------ccc---CCccc--c-------cc-c--ccccCCC------------CC--------------CCCCCeeee
Q psy4510 623 ---------QTV---DDPFQ--L-------AE-H--NKKRGKG------------PG--------------IPTPPLFSF 652 (812)
Q Consensus 623 ---------~~~---~~~~~--~-------~~-~--~~~~~~~------------~~--------------~~~~~~~~~ 652 (812)
... ..|.. . +. . ....+.. +. +....+..+
T Consensus 442 ~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KL 521 (764)
T KOG1063|consen 442 KSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKL 521 (764)
T ss_pred HHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHh
Confidence 000 00000 0 00 0 0000000 00 001235678
Q ss_pred cCCCCceEEEEeCCCCCCeEEecCCCc-----eEEEEecCC--------Cc--eeEEEEecCCCCEEEeecCCCeEEEee
Q psy4510 653 SGHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPRE--------AG--AWSVYLYTNRFGVLATGDCKRNIHIWT 717 (812)
Q Consensus 653 ~gh~~~V~~l~~sp~~~~~las~s~Dg-----~v~iWd~~~--------~~--~~~~~~~s~dg~~lasgs~dg~i~iwd 717 (812)
.||.-+|++++.+| +++++||++... .|++|+..+ +. .++.++|||||++|++.+.|+++.+|.
T Consensus 522 YGHGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~ 600 (764)
T KOG1063|consen 522 YGHGYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYE 600 (764)
T ss_pred ccCceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeee
Confidence 89999999999999 889999998754 689999987 12 245668999999999999999999999
Q ss_pred cCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 718 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 718 ~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
..............+.|+..|++..|+|++. ++||||.|.+|+||...+.+
T Consensus 601 ~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~-~FaTaSRDK~VkVW~~~~~~ 651 (764)
T KOG1063|consen 601 VQEDIKDEFRFACLKAHTRIIWDCSWSPDEK-YFATASRDKKVKVWEEPDLR 651 (764)
T ss_pred eecccchhhhhccccccceEEEEcccCcccc-eeEEecCCceEEEEeccCch
Confidence 8665442223445789999999999999999 79999999999999998884
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=266.09 Aligned_cols=295 Identities=20% Similarity=0.352 Sum_probs=244.7
Q ss_pred ccccccCCCCCEEEEEEcCC-CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy4510 311 DQKPLVGHTNSVEDLQWSPG-EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~ 389 (812)
..+.+.+|.+.+..++|+|- |. +||+|+.|+.||||++..+....|...+..+|...|.+++|+|.|++|++|+.|.+
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~-ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGV-ILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCce-EEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 45678899999999999998 55 89999999999999998665667777777899999999999999999999999999
Q ss_pred EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC
Q psy4510 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (812)
+.||.-.. ..-..+.++.+|...|.+++|+++| ++||+++.|+.|-||.+......
T Consensus 85 ~~Iw~k~~-~efecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiWe~deddEf---------------------- 140 (312)
T KOG0645|consen 85 VVIWKKED-GEFECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIWEIDEDDEF---------------------- 140 (312)
T ss_pred EEEeecCC-CceeEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEEEecCCCcE----------------------
Confidence 99998653 2346789999999999999999997 69999999999999998743210
Q ss_pred CCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccC
Q psy4510 470 QKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNL 549 (812)
Q Consensus 470 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l 549 (812)
T Consensus 141 -------------------------------------------------------------------------------- 140 (312)
T KOG0645|consen 141 -------------------------------------------------------------------------------- 140 (312)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcc
Q psy4510 550 TSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629 (812)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~ 629 (812)
.+...+.+|...|..+.|+|....|+++ |.|++|++|+-....
T Consensus 141 ----------------------------ec~aVL~~HtqDVK~V~WHPt~dlL~S~--SYDnTIk~~~~~~dd------- 183 (312)
T KOG0645|consen 141 ----------------------------ECIAVLQEHTQDVKHVIWHPTEDLLFSC--SYDNTIKVYRDEDDD------- 183 (312)
T ss_pred ----------------------------EEEeeeccccccccEEEEcCCcceeEEe--ccCCeEEEEeecCCC-------
Confidence 0122456677778888888888888888 899999999887433
Q ss_pred cccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC-------CceeEEEEecCCCC
Q psy4510 630 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-------AGAWSVYLYTNRFG 702 (812)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~-------~~~~~~~~~s~dg~ 702 (812)
...+.+++.+|.+.|.+++|++ .|..|++++.|++|+||...+ +++..+... ..
T Consensus 184 ---------------dW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~---~~ 244 (312)
T KOG0645|consen 184 ---------------DWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD---NG 244 (312)
T ss_pred ---------------CeeEEEEecCccceEEEEEecC-CCceEEEecCCcceEeeeeccCcchhcccceEeeeec---cc
Confidence 3448999999999999999999 788999999999999999543 344444443 67
Q ss_pred EEEeecCCCeEEEeecCCC---CCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 703 VLATGDCKRNIHIWTPREA---GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~---~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.||+|+.|+.|++|.-... ..|..+...-..|...|++++|.|.++..|+|||.||.|++|.+.
T Consensus 245 ~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 245 VIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 8999999999999987643 334444555678999999999999643379999999999999874
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=272.32 Aligned_cols=299 Identities=18% Similarity=0.282 Sum_probs=253.4
Q ss_pred ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE
Q psy4510 212 WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 212 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
.......+.+|++.|+.+.|+|+|..||+|+.|..|.+|++.. ..+....+++|++.|..+.|.+++ ..++++
T Consensus 36 l~ap~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~g------dceN~~~lkgHsgAVM~l~~~~d~-s~i~S~ 108 (338)
T KOG0265|consen 36 LQAPIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYG------DCENFWVLKGHSGAVMELHGMRDG-SHILSC 108 (338)
T ss_pred ccchhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccc------cccceeeeccccceeEeeeeccCC-CEEEEe
Confidence 3446677899999999999999999999999999999999876 357788899999999999999999 899999
Q ss_pred eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 292 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
+.|.+|+.||+++++ ..+.+++|...|+.++-+.-|..++.+++.||++++||+| .+.++.++ .....+++
T Consensus 109 gtDk~v~~wD~~tG~----~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R---~k~~~~t~--~~kyqltA 179 (338)
T KOG0265|consen 109 GTDKTVRGWDAETGK----RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR---KKEAIKTF--ENKYQLTA 179 (338)
T ss_pred cCCceEEEEecccce----eeehhccccceeeecCccccCCeEEEecCCCceEEEEeec---ccchhhcc--ccceeEEE
Confidence 999999999999998 6888999999999999777788899999999999999999 45555554 34668999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 372 l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+.|...+..+.+|+-|+.|++||+| ....+..+.+|.++|+.+..+|.| .++.+-+.|.++++||++....
T Consensus 180 v~f~d~s~qv~sggIdn~ikvWd~r---~~d~~~~lsGh~DtIt~lsls~~g-s~llsnsMd~tvrvwd~rp~~p----- 250 (338)
T KOG0265|consen 180 VGFKDTSDQVISGGIDNDIKVWDLR---KNDGLYTLSGHADTITGLSLSRYG-SFLLSNSMDNTVRVWDVRPFAP----- 250 (338)
T ss_pred EEecccccceeeccccCceeeeccc---cCcceEEeecccCceeeEEeccCC-CccccccccceEEEEEecccCC-----
Confidence 9999999999999999999999999 467899999999999999999998 5999999999999999975521
Q ss_pred hhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 452 REAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
..+.+.+..+ ..
T Consensus 251 -----------------------------~~R~v~if~g--~~------------------------------------- 262 (338)
T KOG0265|consen 251 -----------------------------SQRCVKIFQG--HI------------------------------------- 262 (338)
T ss_pred -----------------------------CCceEEEeec--ch-------------------------------------
Confidence 1000000000 00
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
.........++|+|++..+-++ +.|.
T Consensus 263 ----------------------------------------------------hnfeknlL~cswsp~~~~i~ag--s~dr 288 (338)
T KOG0265|consen 263 ----------------------------------------------------HNFEKNLLKCSWSPNGTKITAG--SADR 288 (338)
T ss_pred ----------------------------------------------------hhhhhhcceeeccCCCCccccc--cccc
Confidence 0000123456789999989888 8999
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEE
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 683 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~i 683 (812)
.+++||..... .+..+.||.+.|.+++|+| ...+|.+++.|++|.+
T Consensus 289 ~vyvwd~~~r~-------------------------~lyklpGh~gsvn~~~Fhp-~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 289 FVYVWDTTSRR-------------------------ILYKLPGHYGSVNEVDFHP-TEPIILSCSSDKTIYL 334 (338)
T ss_pred eEEEeeccccc-------------------------EEEEcCCcceeEEEeeecC-CCcEEEEeccCceeEe
Confidence 99999998865 7889999999999999999 6779999999998876
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=286.49 Aligned_cols=276 Identities=25% Similarity=0.465 Sum_probs=244.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..|++++|+. +|.+||||+.||.++||+.... ...+|..|+++|.+|.|+..|.+|++++.|+++.+||..++
T Consensus 236 kdVT~L~Wn~-~G~~LatG~~~G~~riw~~~G~-----l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g- 308 (524)
T KOG0273|consen 236 KDVTSLDWNN-DGTLLATGSEDGEARIWNKDGN-----LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG- 308 (524)
T ss_pred CCcceEEecC-CCCeEEEeecCcEEEEEecCch-----hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc-
Confidence 5799999999 9999999999999999987765 57889999999999999999999999999999999999886
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.....+.-|..+...+.|-.+ ..+++++.|+.|+|+.+.... +..++.+|.+.|.++.|+|.+. +|+
T Consensus 309 ------~~~q~f~~~s~~~lDVdW~~~--~~F~ts~td~~i~V~kv~~~~----P~~t~~GH~g~V~alk~n~tg~-LLa 375 (524)
T KOG0273|consen 309 ------TVKQQFEFHSAPALDVDWQSN--DEFATSSTDGCIHVCKVGEDR----PVKTFIGHHGEVNALKWNPTGS-LLA 375 (524)
T ss_pred ------eEEEeeeeccCCccceEEecC--ceEeecCCCceEEEEEecCCC----cceeeecccCceEEEEECCCCc-eEE
Confidence 666777778888888999876 589999999999999998887 7888999999999999999999 899
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC---------EEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---------LIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~---------~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
+||.|++++||... ...+...+ .+|...|..+.|+|.|. .+++++.|++|++||+. .+.++++|
T Consensus 376 S~SdD~TlkiWs~~---~~~~~~~l-~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~---~gv~i~~f 448 (524)
T KOG0273|consen 376 SCSDDGTLKIWSMG---QSNSVHDL-QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVE---SGVPIHTL 448 (524)
T ss_pred EecCCCeeEeeecC---CCcchhhh-hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEcc---CCceeEee
Confidence 99999999999987 34455666 89999999999999753 79999999999999998 68999999
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
..|+.+|.+++|+|++ .++|+|+.||.|.+|+..+. .+.....+...|..++|+..+..+.+
T Consensus 449 ~kH~~pVysvafS~~g-~ylAsGs~dg~V~iws~~~~-----------------~l~~s~~~~~~Ifel~Wn~~G~kl~~ 510 (524)
T KOG0273|consen 449 MKHQEPVYSVAFSPNG-RYLASGSLDGCVHIWSTKTG-----------------KLVKSYQGTGGIFELCWNAAGDKLGA 510 (524)
T ss_pred ccCCCceEEEEecCCC-cEEEecCCCCeeEeccccch-----------------heeEeecCCCeEEEEEEcCCCCEEEE
Confidence 9999999999999997 69999999999999999988 66777777778999999999965555
Q ss_pred EEeCCCeEEE
Q psy4510 488 STANSGFNIF 497 (812)
Q Consensus 488 ~~~~~~~~~~ 497 (812)
+.+.+.+.+.
T Consensus 511 ~~sd~~vcvl 520 (524)
T KOG0273|consen 511 CASDGSVCVL 520 (524)
T ss_pred EecCCCceEE
Confidence 5555444443
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=261.28 Aligned_cols=281 Identities=20% Similarity=0.352 Sum_probs=223.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC
Q psy4510 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 284 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
.+-+|++++.|.+|++|...++. +.+++....+.|+.+...|+++ .||+++ ...||+||+++.+.. ++.++ .
T Consensus 9 ~~viLvsA~YDhTIRfWqa~tG~----C~rTiqh~dsqVNrLeiTpdk~-~LAaa~-~qhvRlyD~~S~np~-Pv~t~-e 80 (311)
T KOG0315|consen 9 DPVILVSAGYDHTIRFWQALTGI----CSRTIQHPDSQVNRLEITPDKK-DLAAAG-NQHVRLYDLNSNNPN-PVATF-E 80 (311)
T ss_pred CceEEEeccCcceeeeeehhcCe----EEEEEecCccceeeEEEcCCcc-hhhhcc-CCeeEEEEccCCCCC-ceeEE-e
Confidence 33689999999999999999998 6777887788999999999998 466665 478999999986543 67777 8
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 364 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+|...|+++.|..+|+.+++|+.||+++|||+|. .. ......|..+|+++..+|+. .-|++|..+|.|++||+..
T Consensus 81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~---~~-~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~irvWDl~~ 155 (311)
T KOG0315|consen 81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS---LS-CQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNIRVWDLGE 155 (311)
T ss_pred ccCCceEEEEEeecCeEEEecCCCceEEEEeccC---cc-cchhccCCCCcceEEecCCc-ceEEeecCCCcEEEEEccC
Confidence 9999999999999999999999999999999995 22 33334477999999999985 6899999999999999987
Q ss_pred CCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEc
Q psy4510 444 ERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWH 523 (812)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 523 (812)
.... ..........|.+++..|++..++++...+...+|+........
T Consensus 156 ~~c~---------------~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s----------------- 203 (311)
T KOG0315|consen 156 NSCT---------------HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTAS----------------- 203 (311)
T ss_pred Cccc---------------cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccc-----------------
Confidence 7431 11112223578999999998766666666666777654421100
Q ss_pred CCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEE
Q psy4510 524 PQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTL 603 (812)
Q Consensus 524 p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~ 603 (812)
.......+..|.+.+..+.+||++++|+
T Consensus 204 ----------------------------------------------------~l~P~~k~~ah~~~il~C~lSPd~k~la 231 (311)
T KOG0315|consen 204 ----------------------------------------------------ELEPVHKFQAHNGHILRCLLSPDVKYLA 231 (311)
T ss_pred ----------------------------------------------------cceEhhheecccceEEEEEECCCCcEEE
Confidence 0112345788999999999999999999
Q ss_pred EEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEE
Q psy4510 604 AGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 683 (812)
Q Consensus 604 ~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~i 683 (812)
++ |.|.+++||+.+.... .-.++.+|...++.++||. ++++|+||+.|+++|+
T Consensus 232 t~--ssdktv~iwn~~~~~k------------------------le~~l~gh~rWvWdc~FS~-dg~YlvTassd~~~rl 284 (311)
T KOG0315|consen 232 TC--SSDKTVKIWNTDDFFK------------------------LELVLTGHQRWVWDCAFSA-DGEYLVTASSDHTARL 284 (311)
T ss_pred ee--cCCceEEEEecCCcee------------------------eEEEeecCCceEEeeeecc-CccEEEecCCCCceee
Confidence 98 8999999999988721 5667899999999999999 7778888777777777
Q ss_pred EecCC
Q psy4510 684 WTPRE 688 (812)
Q Consensus 684 Wd~~~ 688 (812)
|++..
T Consensus 285 W~~~~ 289 (311)
T KOG0315|consen 285 WDLSA 289 (311)
T ss_pred ccccc
Confidence 76643
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=308.62 Aligned_cols=248 Identities=21% Similarity=0.423 Sum_probs=225.3
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC--------c-------------------ccccccccCCCCCCeeee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--------A-------------------WQVDQKPLGGHTNSAEDL 229 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~--------~-------------------~~~~~~~l~~h~~~V~~l 229 (812)
..++|+.|++ ++.+||.|-.|..|++|.+...+ . .....+.+.||.++|+.+
T Consensus 379 ~~v~ca~fSd-dssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~ 457 (707)
T KOG0263|consen 379 QGVTCAEFSD-DSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGC 457 (707)
T ss_pred CcceeEeecC-CcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeee
Confidence 5799999999 99999999999999999887421 0 111234588999999999
Q ss_pred eEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce
Q psy4510 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ 309 (812)
Q Consensus 230 ~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~ 309 (812)
.|+|+.++|++++.|+++|+|.+.+. .++..++||..+|+.+.|+|.| .++||++.|++-++|......
T Consensus 458 sFsPd~rfLlScSED~svRLWsl~t~-------s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~--- 526 (707)
T KOG0263|consen 458 SFSPDRRFLLSCSEDSSVRLWSLDTW-------SCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNK--- 526 (707)
T ss_pred eecccccceeeccCCcceeeeecccc-------eeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCC---
Confidence 99999999999999999999999984 8889999999999999999999 899999999999999998876
Q ss_pred eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy4510 310 VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389 (812)
Q Consensus 310 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~ 389 (812)
+.+.+.+|.+.|.|+.|+|+.. ++++||.|.+||+||+.+ +.+++.+ .+|.++|.+++|+|+|++|++|+.||.
T Consensus 527 -PlRifaghlsDV~cv~FHPNs~-Y~aTGSsD~tVRlWDv~~---G~~VRiF-~GH~~~V~al~~Sp~Gr~LaSg~ed~~ 600 (707)
T KOG0263|consen 527 -PLRIFAGHLSDVDCVSFHPNSN-YVATGSSDRTVRLWDVST---GNSVRIF-TGHKGPVTALAFSPCGRYLASGDEDGL 600 (707)
T ss_pred -chhhhcccccccceEEECCccc-ccccCCCCceEEEEEcCC---CcEEEEe-cCCCCceEEEEEcCCCceEeecccCCc
Confidence 7899999999999999999999 699999999999999994 4456666 899999999999999999999999999
Q ss_pred EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
|++||+. .+..+..+.+|++.|.++.|+.+| .+||+||.|++|++||+.....
T Consensus 601 I~iWDl~---~~~~v~~l~~Ht~ti~SlsFS~dg-~vLasgg~DnsV~lWD~~~~~~ 653 (707)
T KOG0263|consen 601 IKIWDLA---NGSLVKQLKGHTGTIYSLSFSRDG-NVLASGGADNSVRLWDLTKVIE 653 (707)
T ss_pred EEEEEcC---CCcchhhhhcccCceeEEEEecCC-CEEEecCCCCeEEEEEchhhcc
Confidence 9999998 578999999999999999999997 6999999999999999987643
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=268.26 Aligned_cols=288 Identities=20% Similarity=0.413 Sum_probs=245.9
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.++..+.||.+.|+++.|+| +|.+|||||.|..|.+|++....+ ....+++|+++|..+.|.+++..|++++.|.+
T Consensus 38 ap~m~l~gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdce---N~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~ 113 (338)
T KOG0265|consen 38 APIMLLPGHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCE---NFWVLKGHSGAVMELHGMRDGSHILSCGTDKT 113 (338)
T ss_pred chhhhcCCCcceEEEEEECC-CCCeEeecCCcceEEEEecccccc---ceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence 34445559999999999999 999999999999999999776554 45677899999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
++.||+++| +.++.+++|.+-|.++.-+.-|+.++.+|+.||+++|||+++.. ..+.+. ..-.++++.
T Consensus 114 v~~wD~~tG-------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~----~~~t~~-~kyqltAv~ 181 (338)
T KOG0265|consen 114 VRGWDAETG-------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE----AIKTFE-NKYQLTAVG 181 (338)
T ss_pred EEEEecccc-------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc----hhhccc-cceeEEEEE
Confidence 999999997 88999999999999999777787889999999999999999876 333332 455799999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc-eE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS-VA 405 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~ 405 (812)
|...+.. +.+|+-|+.|++||+| .......+ .+|...|+.+..+|+|.++.+-+.|.++++||+|.+.+.+. +.
T Consensus 182 f~d~s~q-v~sggIdn~ikvWd~r---~~d~~~~l-sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~ 256 (338)
T KOG0265|consen 182 FKDTSDQ-VISGGIDNDIKVWDLR---KNDGLYTL-SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVK 256 (338)
T ss_pred ecccccc-eeeccccCceeeeccc---cCcceEEe-ecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEE
Confidence 9999885 8999999999999998 44456666 89999999999999999999999999999999998776665 88
Q ss_pred EcccCCC----CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 406 TFKHHTA----PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 406 ~~~~h~~----~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.+.+|.. ....++|+|++ ..+.+|+.|+.+.+||....+ .+.+...+...|.+++|+|.
T Consensus 257 if~g~~hnfeknlL~cswsp~~-~~i~ags~dr~vyvwd~~~r~----------------~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 257 IFQGHIHNFEKNLLKCSWSPNG-TKITAGSADRFVYVWDTTSRR----------------ILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred EeecchhhhhhhcceeeccCCC-CccccccccceEEEeeccccc----------------EEEEcCCcceeEEEeeecCC
Confidence 8887643 45788999986 689999999999999998763 44555555568999999999
Q ss_pred CCCEEEEEeCCC
Q psy4510 482 LPGTIISTANSG 493 (812)
Q Consensus 482 ~~~~~~~~~~~~ 493 (812)
.+ ++.+++.|.
T Consensus 320 e~-iils~~sdk 330 (338)
T KOG0265|consen 320 EP-IILSCSSDK 330 (338)
T ss_pred Cc-EEEEeccCc
Confidence 86 555555554
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=269.21 Aligned_cols=340 Identities=18% Similarity=0.287 Sum_probs=251.3
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
..+.+|..|++.|++++.+|+. ++++||+.|..-.+|++.++. ....+.+|+..|+++.|+.+|. +||+|..+|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~-~l~aTGGgDD~AflW~~~~ge----~~~eltgHKDSVt~~~Fshdgt-lLATGdmsG 128 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNN-NLVATGGGDDLAFLWDISTGE----FAGELTGHKDSVTCCSFSHDGT-LLATGDMSG 128 (399)
T ss_pred cceeehhhcCCceEEEEeCCCC-ceEEecCCCceEEEEEccCCc----ceeEecCCCCceEEEEEccCce-EEEecCCCc
Confidence 4467899999999999999965 899999999999999999987 5778899999999999999999 799999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.|+||+..++. ....+ ...-..+.-+.|+|.+.+|+.|+.||.+.+|.+.+ +...+.+.+|..++++=.|.|+
T Consensus 129 ~v~v~~~stg~---~~~~~-~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~---~~~~kv~~Gh~~~ct~G~f~pd 201 (399)
T KOG0296|consen 129 KVLVFKVSTGG---EQWKL-DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS---QALCKVMSGHNSPCTCGEFIPD 201 (399)
T ss_pred cEEEEEcccCc---eEEEe-ecccCceEEEEecccccEEEeecCCCcEEEEECCC---cceeeEecCCCCCcccccccCC
Confidence 99999998543 33444 34567789999999999999999999999999974 4678899999999999999999
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee-cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH-LGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
| ..++++..||+|++||+.+.+. +.... ..+.....+.++..+ ..++.+..++...+-
T Consensus 202 G-Kr~~tgy~dgti~~Wn~ktg~p----------------~~~~~~~e~~~~~~~~~~~~~-~~~~~g~~e~~~~~~--- 260 (399)
T KOG0296|consen 202 G-KRILTGYDDGTIIVWNPKTGQP----------------LHKITQAEGLELPCISLNLAG-STLTKGNSEGVACGV--- 260 (399)
T ss_pred C-ceEEEEecCceEEEEecCCCce----------------eEEecccccCcCCcccccccc-ceeEeccCCccEEEE---
Confidence 7 6899999999999999998842 11111 112244555555543 344444433322111
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
....+.++.+.... ...
T Consensus 261 ----------------------~~~sgKVv~~~n~~-----------------------------------------~~~ 277 (399)
T KOG0296|consen 261 ----------------------NNGSGKVVNCNNGT-----------------------------------------VPE 277 (399)
T ss_pred ----------------------ccccceEEEecCCC-----------------------------------------Ccc
Confidence 01112222222110 001
Q ss_pred EEecccceEEEE---EEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCc
Q psy4510 582 YFIRHRGCINRV---RTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 658 (812)
Q Consensus 582 ~~~~h~~~v~~l---~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~ 658 (812)
....+...+.++ .+|..-+..++| +-||+|.|||+.... ++..-.|...
T Consensus 278 l~~~~e~~~esve~~~~ss~lpL~A~G--~vdG~i~iyD~a~~~--------------------------~R~~c~he~~ 329 (399)
T KOG0296|consen 278 LKPSQEELDESVESIPSSSKLPLAACG--SVDGTIAIYDLAAST--------------------------LRHICEHEDG 329 (399)
T ss_pred ccccchhhhhhhhhcccccccchhhcc--cccceEEEEecccch--------------------------hheeccCCCc
Confidence 112222333444 444444444444 999999999998875 3334458888
Q ss_pred eEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcce
Q psy4510 659 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 738 (812)
Q Consensus 659 V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V 738 (812)
|+.+.|-+ .. +|+ +++.+|.|+.||.++|+ ++.++.||...|
T Consensus 330 V~~l~w~~-t~-~l~--------------------------------t~c~~g~v~~wDaRtG~----l~~~y~GH~~~I 371 (399)
T KOG0296|consen 330 VTKLKWLN-TD-YLL--------------------------------TACANGKVRQWDARTGQ----LKFTYTGHQMGI 371 (399)
T ss_pred eEEEEEcC-cc-hhe--------------------------------eeccCceEEeeeccccc----eEEEEecCchhe
Confidence 99999987 32 444 44455666666667777 678899999999
Q ss_pred eEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 739 EDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 739 ~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.+++++|+++ +++|+|.|++.+|+++.
T Consensus 372 l~f~ls~~~~-~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 372 LDFALSPQKR-LVVTVSDDNTALVFEVP 398 (399)
T ss_pred eEEEEcCCCc-EEEEecCCCeEEEEecC
Confidence 9999999999 89999999999999875
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=285.15 Aligned_cols=513 Identities=14% Similarity=0.131 Sum_probs=369.0
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCceEEe
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQLAEH 250 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~i~vw 250 (812)
+|...|.-+. | -|..|..+..++.+.||+..+.+.. ......+......|+++.- |. =+.++.|+..|.+.+|
T Consensus 112 ~~~a~v~~l~--~-fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~H-P~TYLNKIvvGs~~G~lql~ 187 (910)
T KOG1539|consen 112 LHGAKVHLLL--P-FGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALLH-PSTYLNKIVVGSSQGRLQLW 187 (910)
T ss_pred cccceEEEEe--e-ecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEec-chhheeeEEEeecCCcEEEE
Confidence 5555555554 4 7788888888999999999885322 1111222222233777653 43 3567899999999999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
+++++ +.++++.++...|+++.-+|-- ..+|.|..+|+|.+++++.++ .+..++...+.|+.++|..|
T Consensus 188 Nvrt~-------K~v~~f~~~~s~IT~ieqsPaL-DVVaiG~~~G~ViifNlK~dk----il~sFk~d~g~VtslSFrtD 255 (910)
T KOG1539|consen 188 NVRTG-------KVVYTFQEFFSRITAIEQSPAL-DVVAIGLENGTVIIFNLKFDK----ILMSFKQDWGRVTSLSFRTD 255 (910)
T ss_pred EeccC-------cEEEEecccccceeEeccCCcc-eEEEEeccCceEEEEEcccCc----EEEEEEccccceeEEEeccC
Confidence 99996 8999999999999999999987 789999999999999999987 56777744699999999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceEEccc
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKH 409 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~ 409 (812)
|+.++++|+..|.+.+||+.. .+.+.....+|.+.|+...|.|..+.+++.+.|..+++|=...... .+.+..-.+
T Consensus 256 G~p~las~~~~G~m~~wDLe~---kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~G 332 (910)
T KOG1539|consen 256 GNPLLASGRSNGDMAFWDLEK---KKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGG 332 (910)
T ss_pred CCeeEEeccCCceEEEEEcCC---CeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccC
Confidence 999999999999999999983 4444555578999999999999999999999999999886553221 355666789
Q ss_pred CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee--cCCCceeEEEEcCCC----C
Q psy4510 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH--LGQKEIKELHWHPQL----P 483 (812)
Q Consensus 410 h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~----~ 483 (812)
|..|..+|.|.-.....+.+++.|++++.+++.....................-.+.+ ..-.+|..+++.... .
T Consensus 333 Hs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~ 412 (910)
T KOG1539|consen 333 HSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWD 412 (910)
T ss_pred CCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhc
Confidence 9999999999966568999999999999998876643322111000000000000000 011234444444321 1
Q ss_pred CEEEEEeCC-CeEEEEeCCCCCcccEEeec----CCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccc
Q psy4510 484 GTIISTANS-GFNIFRTISDLPSQLLFIHL----GQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNER 558 (812)
Q Consensus 484 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~ 558 (812)
.++++..++ ....|...+....+...... -...+++++.++.++..+++.+.+.+.++. +.++...+.
T Consensus 413 Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fN------mQSGi~r~s- 485 (910)
T KOG1539|consen 413 NVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFN------MQSGIHRKS- 485 (910)
T ss_pred ceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEE------cccCeeecc-
Confidence 233333222 34555555544444444333 345788999999976667766666443332 222221110
Q ss_pred ccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccccc
Q psy4510 559 ELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKR 638 (812)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 638 (812)
......|.+.|+.++...-++.++++ +.+|.+++|+.....
T Consensus 486 ---------------------f~~~~ah~~~V~gla~D~~n~~~vsa--~~~Gilkfw~f~~k~---------------- 526 (910)
T KOG1539|consen 486 ---------------------FGDSPAHKGEVTGLAVDGTNRLLVSA--GADGILKFWDFKKKV---------------- 526 (910)
T ss_pred ---------------------cccCccccCceeEEEecCCCceEEEc--cCcceEEEEecCCcc----------------
Confidence 01235788999999999988889998 899999999998875
Q ss_pred CCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC----------CceeEEEEecCCCCEEEeec
Q psy4510 639 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE----------AGAWSVYLYTNRFGVLATGD 708 (812)
Q Consensus 639 ~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~----------~~~~~~~~~s~dg~~lasgs 708 (812)
++..++ -...+.++..+. ...++|.+..|-.|++.|+.+ +.-++.+.|||||++|++++
T Consensus 527 ---------l~~~l~-l~~~~~~iv~hr-~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisas 595 (910)
T KOG1539|consen 527 ---------LKKSLR-LGSSITGIVYHR-VSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISAS 595 (910)
T ss_pred ---------eeeeec-cCCCcceeeeee-hhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEee
Confidence 333333 234677788887 677999999999999999997 34456678999999999999
Q ss_pred CCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccC-CceEEeeecCc
Q psy4510 709 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-RSNRIGARRDM 768 (812)
Q Consensus 709 ~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~D-g~i~iWd~~~~ 768 (812)
.|++||+||+.++.. +..+ .-..+.++|.|||.|. +|||+..| .-|.+|.-+..
T Consensus 596 mD~tIr~wDlpt~~l----ID~~-~vd~~~~sls~SPngD-~LAT~Hvd~~gIylWsNksl 650 (910)
T KOG1539|consen 596 MDSTIRTWDLPTGTL----IDGL-LVDSPCTSLSFSPNGD-FLATVHVDQNGIYLWSNKSL 650 (910)
T ss_pred cCCcEEEEeccCcce----eeeE-ecCCcceeeEECCCCC-EEEEEEecCceEEEEEchhH
Confidence 999999999999973 3332 2246889999999999 89999999 67999986554
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=271.90 Aligned_cols=299 Identities=23% Similarity=0.358 Sum_probs=255.6
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+..+..+||.+-|.|+++.| ...+++||+.|++|+|||+.++. ...++.||...|..+++|+...||.+++.|+.
T Consensus 142 Kl~rVi~gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~----LkltltGhi~~vr~vavS~rHpYlFs~gedk~ 216 (460)
T KOG0285|consen 142 KLYRVISGHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQ----LKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQ 216 (460)
T ss_pred eehhhhhhccceEEEEeeCC-CceeEEecCCCceeEEEEcccCe----EEEeecchhheeeeeeecccCceEEEecCCCe
Confidence 55667789999999999999 99999999999999999999998 78899999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|+.||+... +.++.+.||-..|+||+.+|.- ..|++|+.|.+++|||+++.. ....+.||..+|..+.
T Consensus 217 VKCwDLe~n-------kvIR~YhGHlS~V~~L~lhPTl-dvl~t~grDst~RvWDiRtr~----~V~~l~GH~~~V~~V~ 284 (460)
T KOG0285|consen 217 VKCWDLEYN-------KVIRHYHGHLSGVYCLDLHPTL-DVLVTGGRDSTIRVWDIRTRA----SVHVLSGHTNPVASVM 284 (460)
T ss_pred eEEEechhh-------hhHHHhccccceeEEEeccccc-eeEEecCCcceEEEeeecccc----eEEEecCCCCcceeEE
Confidence 999999974 8889999999999999999988 899999999999999999987 6788999999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
+.|.++. +++||.|++|++||++.+ +.+.++ ..|...|.+++.+|....||+++.| .|+-|++. .+..+..
T Consensus 285 ~~~~dpq-vit~S~D~tvrlWDl~ag---kt~~tl-t~hkksvral~lhP~e~~fASas~d-nik~w~~p---~g~f~~n 355 (460)
T KOG0285|consen 285 CQPTDPQ-VITGSHDSTVRLWDLRAG---KTMITL-THHKKSVRALCLHPKENLFASASPD-NIKQWKLP---EGEFLQN 355 (460)
T ss_pred eecCCCc-eEEecCCceEEEeeeccC---ceeEee-ecccceeeEEecCCchhhhhccCCc-cceeccCC---ccchhhc
Confidence 9998885 999999999999999954 445666 7899999999999999999999988 49999998 5777888
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+.+|.+-|.+++.+.++ ++++|+..|.+.+||.+.+..-...+ ....|..+ .....|.+.+|...+..++
T Consensus 356 lsgh~~iintl~~nsD~--v~~~G~dng~~~fwdwksg~nyQ~~~----t~vqpGSl----~sEagI~as~fDktg~rli 425 (460)
T KOG0285|consen 356 LSGHNAIINTLSVNSDG--VLVSGGDNGSIMFWDWKSGHNYQRGQ----TIVQPGSL----ESEAGIFASCFDKTGSRLI 425 (460)
T ss_pred cccccceeeeeeeccCc--eEEEcCCceEEEEEecCcCccccccc----ccccCCcc----ccccceeEEeecccCceEE
Confidence 99999999999999875 89999999999999998874321000 00011111 1234688999999886555
Q ss_pred EEEeCCCeEEEEeCC
Q psy4510 487 ISTANSGFNIFRTIS 501 (812)
Q Consensus 487 ~~~~~~~~~~~~~~~ 501 (812)
.+.++..+.+|+...
T Consensus 426 t~eadKtIk~~keDe 440 (460)
T KOG0285|consen 426 TGEADKTIKMYKEDE 440 (460)
T ss_pred eccCCcceEEEeccc
Confidence 555566677776544
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=270.76 Aligned_cols=291 Identities=21% Similarity=0.391 Sum_probs=261.1
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|..+|+.+-|.|+-..+++++.|++|++||..++ .....++||.+.+..++|+..| .+|++++.|
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg-------~~e~~LrGHt~sv~di~~~a~G-k~l~tcSsD 171 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETG-------ELERSLRGHTDSVFDISFDASG-KYLATCSSD 171 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccch-------hhhhhhhccccceeEEEEecCc-cEEEecCCc
Confidence 55678889999999999999999999999999999999997 6688999999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
-.+++||..+... +.+.+.+|...|.+++|-|.|. .+++|+.|.+|+.|++. +..|+.++ .+|...|..++.
T Consensus 172 l~~~LWd~~~~~~---c~ks~~gh~h~vS~V~f~P~gd-~ilS~srD~tik~We~~---tg~cv~t~-~~h~ewvr~v~v 243 (406)
T KOG0295|consen 172 LSAKLWDFDTFFR---CIKSLIGHEHGVSSVFFLPLGD-HILSCSRDNTIKAWECD---TGYCVKTF-PGHSEWVRMVRV 243 (406)
T ss_pred cchhheeHHHHHH---HHHHhcCcccceeeEEEEecCC-eeeecccccceeEEecc---cceeEEec-cCchHhEEEEEe
Confidence 9999999987432 6778899999999999999998 59999999999999999 67788888 899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC--------------CCcEEEEEECCCCEEEEE
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT--------------ESSTFASGGADDQIALWD 440 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~--------------~~~~l~s~~~dg~v~iwd 440 (812)
+.+|.++|+++.|.+|++|-+. .+++...++.|..+|.+++|.|. +.+++.+++.|++|++||
T Consensus 244 ~~DGti~As~s~dqtl~vW~~~---t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wd 320 (406)
T KOG0295|consen 244 NQDGTIIASCSNDQTLRVWVVA---TKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWD 320 (406)
T ss_pred cCCeeEEEecCCCceEEEEEec---cchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEe
Confidence 9999999999999999999998 56778889999999999999774 225889999999999999
Q ss_pred cCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEE
Q psy4510 441 LAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 520 (812)
+.++. +
T Consensus 321 v~tg~-----------------c--------------------------------------------------------- 326 (406)
T KOG0295|consen 321 VSTGM-----------------C--------------------------------------------------------- 326 (406)
T ss_pred ccCCe-----------------E---------------------------------------------------------
Confidence 87762 1
Q ss_pred EEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC
Q psy4510 521 HWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS 600 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~ 600 (812)
...+.+|...|..++|+|.|+
T Consensus 327 -----------------------------------------------------------L~tL~ghdnwVr~~af~p~Gk 347 (406)
T KOG0295|consen 327 -----------------------------------------------------------LFTLVGHDNWVRGVAFSPGGK 347 (406)
T ss_pred -----------------------------------------------------------EEEEecccceeeeeEEcCCCe
Confidence 224566777999999999999
Q ss_pred eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCce
Q psy4510 601 TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680 (812)
Q Consensus 601 ~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~ 680 (812)
+|+++ .+|+++++||+++.. ++.++..|..-|++++|.. +.-+++||+-|.+
T Consensus 348 yi~Sc--aDDktlrvwdl~~~~-------------------------cmk~~~ah~hfvt~lDfh~-~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 348 YILSC--ADDKTLRVWDLKNLQ-------------------------CMKTLEAHEHFVTSLDFHK-TAPYVVTGSVDQT 399 (406)
T ss_pred EEEEE--ecCCcEEEEEeccce-------------------------eeeccCCCcceeEEEecCC-CCceEEeccccce
Confidence 99998 899999999999987 8899999999999999998 5559999999999
Q ss_pred EEEEe
Q psy4510 681 IHIWT 685 (812)
Q Consensus 681 v~iWd 685 (812)
+++|.
T Consensus 400 ~KvwE 404 (406)
T KOG0295|consen 400 VKVWE 404 (406)
T ss_pred eeeee
Confidence 99996
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=278.83 Aligned_cols=287 Identities=24% Similarity=0.391 Sum_probs=243.5
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
...-+.+|..+.|.|+|+.|++|+..|.+.+|+... ..--..+..|...|.++.|++++ ..++||+.+|.|+
T Consensus 92 ~NKvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-------fnFEtilQaHDs~Vr~m~ws~~g-~wmiSgD~gG~iK 163 (464)
T KOG0284|consen 92 SNKVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-------FNFETILQAHDSPVRTMKWSHNG-TWMISGDKGGMIK 163 (464)
T ss_pred ccccccceeeEEEcCCCceeEeecccccEEEecCce-------eeHHHHhhhhcccceeEEEccCC-CEEEEcCCCceEE
Confidence 344567899999999999999999999999999754 23334467899999999999999 8999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+|+..-.. .......|...|++++|+|+.. .|++|+.||+|+|||.+.... -..+ .+|.-.|.++.|+|..
T Consensus 164 yWqpnmnn----Vk~~~ahh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~ke---e~vL-~GHgwdVksvdWHP~k 234 (464)
T KOG0284|consen 164 YWQPNMNN----VKIIQAHHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKE---ERVL-RGHGWDVKSVDWHPTK 234 (464)
T ss_pred ecccchhh----hHHhhHhhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCch---hhee-ccCCCCcceeccCCcc
Confidence 99987664 2333344558999999999887 599999999999999985432 2333 7999999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
.+|++|+.|..|++||.| ++.++.++..|+..|+.+.|+|++ ++|+++|.|..++++|+++.+
T Consensus 235 gLiasgskDnlVKlWDpr---Sg~cl~tlh~HKntVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mk------------- 297 (464)
T KOG0284|consen 235 GLIASGSKDNLVKLWDPR---SGSCLATLHGHKNTVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMK------------- 297 (464)
T ss_pred ceeEEccCCceeEeecCC---CcchhhhhhhccceEEEEEEcCCC-CeeEEccCCceEEEEehhHhH-------------
Confidence 999999999999999999 689999999999999999999997 899999999999999999664
Q ss_pred CCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc
Q psy4510 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 538 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~ 538 (812)
++.....+.+.+.++.|||-.+.++++++.++..+++......+.......+...|.+++|+|- |.++++++..
T Consensus 298 ---El~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPl--Ghil~tgsnd- 371 (464)
T KOG0284|consen 298 ---ELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPL--GHILATGSND- 371 (464)
T ss_pred ---HHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcccccceeeeecccc--ceeEeecCCC-
Confidence 3444445667899999999999999999999998888887666666667778889999999999 8888887664
Q ss_pred eEEEEeeccc
Q psy4510 539 NIFRTISMSN 548 (812)
Q Consensus 539 ~~~~~~~~~~ 548 (812)
+..++|.
T Consensus 372 ---~t~rfw~ 378 (464)
T KOG0284|consen 372 ---RTVRFWT 378 (464)
T ss_pred ---cceeeec
Confidence 4444544
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=265.67 Aligned_cols=208 Identities=24% Similarity=0.407 Sum_probs=191.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..+.+.+|.++|+|+++.|...++++|+.|++|+|||+.++ +...++.||...|..+++|+.. -+|++++.|
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg-------~LkltltGhi~~vr~vavS~rH-pYlFs~ged 214 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATG-------QLKLTLTGHIETVRGVAVSKRH-PYLFSAGED 214 (460)
T ss_pred ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccC-------eEEEeecchhheeeeeeecccC-ceEEEecCC
Confidence 45678899999999999999999999999999999999996 8888999999999999999998 699999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|+.||+...+ .++.+.||-+.|.|++.+|.-. +|++|+.|.++|+||+| +...+..+ .+|..+|.++.+
T Consensus 215 k~VKCwDLe~nk----vIR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiR---tr~~V~~l-~GH~~~V~~V~~ 285 (460)
T KOG0285|consen 215 KQVKCWDLEYNK----VIRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIR---TRASVHVL-SGHTNPVASVMC 285 (460)
T ss_pred CeeEEEechhhh----hHHHhccccceeEEEeccccce-eEEecCCcceEEEeeec---ccceEEEe-cCCCCcceeEEe
Confidence 999999999987 7889999999999999999988 79999999999999999 45556777 899999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|....+++|+.|++|++||++ .++...++..|...|.+++.+|.. ..||+++.|. |+-|++..+
T Consensus 286 ~~~dpqvit~S~D~tvrlWDl~---agkt~~tlt~hkksvral~lhP~e-~~fASas~dn-ik~w~~p~g 350 (460)
T KOG0285|consen 286 QPTDPQVITGSHDSTVRLWDLR---AGKTMITLTHHKKSVRALCLHPKE-NLFASASPDN-IKQWKLPEG 350 (460)
T ss_pred ecCCCceEEecCCceEEEeeec---cCceeEeeecccceeeEEecCCch-hhhhccCCcc-ceeccCCcc
Confidence 9999999999999999999999 467788889999999999999985 6899998875 899988655
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=298.25 Aligned_cols=276 Identities=21% Similarity=0.392 Sum_probs=236.0
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
..-...++|..|+++++.||.|-.|..|++|.+.. +.+..+++ .++- ..+=+++.|-.+.+
T Consensus 375 ~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p--------~kl~~lk~-------~~~l----~~~d~~sad~~~~~ 435 (707)
T KOG0263|consen 375 HNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTP--------KKLKKLKD-------ASDL----SNIDTESADVDVDM 435 (707)
T ss_pred EEcCCcceeEeecCCcchhhccccccEEEEEecch--------hhhccccc-------hhhh----ccccccccchhhhh
Confidence 33445799999999999999999999999999875 23333332 1111 12223444445777
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
.|..+.. ....+.||.++|..+.|+|+.+ +|++||.|+++|+|.++ +..++... .+|..+|..+.|+|.|-
T Consensus 436 ~D~~~~~----~~~~L~GH~GPVyg~sFsPd~r-fLlScSED~svRLWsl~---t~s~~V~y-~GH~~PVwdV~F~P~Gy 506 (707)
T KOG0263|consen 436 LDDDSSG----TSRTLYGHSGPVYGCSFSPDRR-FLLSCSEDSSVRLWSLD---TWSCLVIY-KGHLAPVWDVQFAPRGY 506 (707)
T ss_pred ccccCCc----eeEEeecCCCceeeeeeccccc-ceeeccCCcceeeeecc---cceeEEEe-cCCCcceeeEEecCCce
Confidence 7777766 4667999999999999999998 79999999999999999 56677777 79999999999999999
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 380 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
+||||+.|++-++|... ...++..+.+|.+.|.|+.|+|+. .++++||.|.+|++||+.++..
T Consensus 507 YFatas~D~tArLWs~d---~~~PlRifaghlsDV~cv~FHPNs-~Y~aTGSsD~tVRlWDv~~G~~------------- 569 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTD---HNKPLRIFAGHLSDVDCVSFHPNS-NYVATGSSDRTVRLWDVSTGNS------------- 569 (707)
T ss_pred EEEecCCCceeeeeecc---cCCchhhhcccccccceEEECCcc-cccccCCCCceEEEEEcCCCcE-------------
Confidence 99999999999999998 467899999999999999999985 7999999999999999987721
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCce
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 539 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~ 539 (812)
T Consensus 570 -------------------------------------------------------------------------------- 569 (707)
T KOG0263|consen 570 -------------------------------------------------------------------------------- 569 (707)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecc
Q psy4510 540 IFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLK 619 (812)
Q Consensus 540 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~ 619 (812)
.+.+.+|.++|.+++|||+|++|++| +.||.|.+||+.
T Consensus 570 ----------------------------------------VRiF~GH~~~V~al~~Sp~Gr~LaSg--~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 570 ----------------------------------------VRIFTGHKGPVTALAFSPCGRYLASG--DEDGLIKIWDLA 607 (707)
T ss_pred ----------------------------------------EEEecCCCCceEEEEEcCCCceEeec--ccCCcEEEEEcC
Confidence 23456788899999999999999999 999999999999
Q ss_pred ccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 620 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
++. ++..+.+|++.|.++.||. +|.+||+|+.|.+|++||+..
T Consensus 608 ~~~-------------------------~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 608 NGS-------------------------LVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CCc-------------------------chhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEchh
Confidence 987 7888999999999999999 899999999999999999875
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=267.04 Aligned_cols=282 Identities=20% Similarity=0.324 Sum_probs=249.2
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
...+.||..+|+.+-|+| +-.++|+++.|++|++||..+++ ....|.||+..|..++|+..|++|++++.|-.++
T Consensus 101 ~~~l~g~r~~vt~v~~hp-~~~~v~~as~d~tikv~D~~tg~----~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~ 175 (406)
T KOG0295|consen 101 VQKLAGHRSSVTRVIFHP-SEALVVSASEDATIKVFDTETGE----LERSLRGHTDSVFDISFDASGKYLATCSSDLSAK 175 (406)
T ss_pred hhhhhccccceeeeeecc-CceEEEEecCCceEEEEEccchh----hhhhhhccccceeEEEEecCccEEEecCCccchh
Confidence 444558999999999999 99999999999999999999998 6889999999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||..+ ..+++..+.+|...|.++.|-|.| .++++++.|.+|+.|++.++- +...+.+|...|.-++.+
T Consensus 176 LWd~~~------~~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We~~tg~----cv~t~~~h~ewvr~v~v~ 244 (406)
T KOG0295|consen 176 LWDFDT------FFRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWECDTGY----CVKTFPGHSEWVRMVRVN 244 (406)
T ss_pred heeHHH------HHHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEecccce----eEEeccCchHhEEEEEec
Confidence 999987 358888999999999999999999 899999999999999999998 788999999999999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC---------------CCEEEEEeCCCcEEEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT---------------EPLIVSGGDDGCIHVW 393 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---------------~~~l~sg~~dg~i~iw 393 (812)
.+|. ++|+|+.|.+|++|-+. .+.|...+ ..|..+|.|++|-|. ++++.+|+.|++|++|
T Consensus 245 ~DGt-i~As~s~dqtl~vW~~~---t~~~k~~l-R~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~w 319 (406)
T KOG0295|consen 245 QDGT-IIASCSNDQTLRVWVVA---TKQCKAEL-REHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIW 319 (406)
T ss_pred CCee-EEEecCCCceEEEEEec---cchhhhhh-hccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEE
Confidence 9998 89999999999999998 44454555 789999999999763 2489999999999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
|+. .+.++.++.+|...|..++|+|.| ++|+++..|+++++||+.+.++ +.....+..-+
T Consensus 320 dv~---tg~cL~tL~ghdnwVr~~af~p~G-kyi~ScaDDktlrvwdl~~~~c----------------mk~~~ah~hfv 379 (406)
T KOG0295|consen 320 DVS---TGMCLFTLVGHDNWVRGVAFSPGG-KYILSCADDKTLRVWDLKNLQC----------------MKTLEAHEHFV 379 (406)
T ss_pred ecc---CCeEEEEEecccceeeeeEEcCCC-eEEEEEecCCcEEEEEecccee----------------eeccCCCccee
Confidence 998 689999999999999999999987 7999999999999999998843 22222334468
Q ss_pred eEEEEcCCCCCEEEEEeCC
Q psy4510 474 KELHWHPQLPGTIISTANS 492 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~ 492 (812)
+++.|+.+.+ .+++++-+
T Consensus 380 t~lDfh~~~p-~VvTGsVd 397 (406)
T KOG0295|consen 380 TSLDFHKTAP-YVVTGSVD 397 (406)
T ss_pred EEEecCCCCc-eEEecccc
Confidence 9999999987 44454433
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=275.14 Aligned_cols=318 Identities=18% Similarity=0.278 Sum_probs=244.5
Q ss_pred CCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccc-cCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 163 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP-LGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 163 ~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~-l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
.++...-..+.+|+..|.++++.| .|-.|+|||.|.+|++||++.........+. .......|.+++|++.|..|++.
T Consensus 154 ~IP~shEi~l~hgtk~Vsal~~Dp-~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvv 232 (641)
T KOG0772|consen 154 LIPGSHEIQLKHGTKIVSALAVDP-SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVV 232 (641)
T ss_pred cCCccceEeccCCceEEEEeeecC-CCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEE
Confidence 344444445568999999999999 9999999999999999999976543222233 33456689999999999999999
Q ss_pred eCCCceEEeeCCCCCCC-----CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc--cc
Q psy4510 242 DDPFQLAEHNKKRGKGP-----GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ--KP 314 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~-----~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--~~ 314 (812)
+.....+|+|-..-... .....-+...+||...+++.+|+|.....++|++.||+++||++.......... +.
T Consensus 233 sg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~ 312 (641)
T KOG0772|consen 233 SGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP 312 (641)
T ss_pred ecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeecc
Confidence 99999999987653100 001223345679999999999999998899999999999999998776422111 22
Q ss_pred ccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC--CeEEEEEcCCCCEEEEEeCCCcEEE
Q psy4510 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS--DVNVISWNRTEPLIVSGGDDGCIHV 392 (812)
Q Consensus 315 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~sg~~dg~i~i 392 (812)
..+..-+++.++|+|+++ +||+|+.||+|.+|+.+.. .......+..+|.. .|+||+|+++|++|++-+.|+++++
T Consensus 313 ~~g~Rv~~tsC~~nrdg~-~iAagc~DGSIQ~W~~~~~-~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKv 390 (641)
T KOG0772|consen 313 AGGKRVPVTSCAWNRDGK-LIAAGCLDGSIQIWDKGSR-TVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKV 390 (641)
T ss_pred CCCcccCceeeecCCCcc-hhhhcccCCceeeeecCCc-ccccceEeeeccCCCCceeEEEeccccchhhhccCCCceee
Confidence 234445889999999999 6999999999999998643 23344555588887 9999999999999999999999999
Q ss_pred EecCCCCCCCceEEcccC--CCCEEEEEEccCCCcEEEEEEC------CCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 393 WDLRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFASGGA------DDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
||+|+++ +++....+- .-+-+.++|+|+. .+|++|+. .|.+.+||..+... +.
T Consensus 391 WDLrq~k--kpL~~~tgL~t~~~~tdc~FSPd~-kli~TGtS~~~~~~~g~L~f~d~~t~d~----------------v~ 451 (641)
T KOG0772|consen 391 WDLRQFK--KPLNVRTGLPTPFPGTDCCFSPDD-KLILTGTSAPNGMTAGTLFFFDRMTLDT----------------VY 451 (641)
T ss_pred eeccccc--cchhhhcCCCccCCCCccccCCCc-eEEEecccccCCCCCceEEEEeccceee----------------EE
Confidence 9999854 566655443 3456789999996 68888764 46799999877632 22
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
.+.-....|..+.|||..+.++++++++...+|...+.
T Consensus 452 ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyYdp~~ 489 (641)
T KOG0772|consen 452 KIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYYDPNE 489 (641)
T ss_pred EecCCCceEEEEeecchhhheeeecCCCceEEEECccc
Confidence 22233457999999999999999999999888866543
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=245.13 Aligned_cols=286 Identities=17% Similarity=0.276 Sum_probs=241.2
Q ss_pred CCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 163 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 163 ~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
+++.+....+.+|.++|.++.|+- +|++.+|+|.|.+|++|+.-.+. ++++..+|...|..++.+.|+..+++|+
T Consensus 4 e~ptkr~~~l~~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~----liktYsghG~EVlD~~~s~Dnskf~s~G 78 (307)
T KOG0316|consen 4 ELPTKRLSILDCAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGA----LIKTYSGHGHEVLDAALSSDNSKFASCG 78 (307)
T ss_pred cCcchhceeecccccceEEEEEcc-CCCEEEEcCCCceEEeecccccc----eeeeecCCCceeeeccccccccccccCC
Confidence 445556667778999999999999 99999999999999999998887 8899999999999999999999999999
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.|..+.+||+.+| +.++.+++|.++|+.++|+... ..+++|+.|.++++||-++... .+.+.+......|
T Consensus 79 gDk~v~vwDV~TG-------kv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~--ePiQildea~D~V 148 (307)
T KOG0316|consen 79 GDKAVQVWDVNTG-------KVDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSF--EPIQILDEAKDGV 148 (307)
T ss_pred CCceEEEEEcccC-------eeeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCC--CccchhhhhcCce
Confidence 9999999999997 8899999999999999999988 8999999999999999987653 2456677777889
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
.++..+.. .+++|+.||++|.||+|.+.. .. .--..+|+|++|+++++..+.++.|+++++.|-. +++
T Consensus 149 ~Si~v~~h---eIvaGS~DGtvRtydiR~G~l---~s---Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~---tGk 216 (307)
T KOG0316|consen 149 SSIDVAEH---EIVAGSVDGTVRTYDIRKGTL---SS---DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKE---TGK 216 (307)
T ss_pred eEEEeccc---EEEeeccCCcEEEEEeeccee---eh---hhcCCcceeEEecCCCCEEEEeeccceeeecccc---hhH
Confidence 99988653 599999999999999995432 21 2346689999999999999999999999999987 688
Q ss_pred ceEEcccCCCCEEE--EEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeEEEEc
Q psy4510 403 SVATFKHHTAPVTT--VEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWH 479 (812)
Q Consensus 403 ~~~~~~~h~~~v~~--v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 479 (812)
.+..+++|...-.. .+++... ..+++|+.||.|.+||+.... ++.....+.. .+.++++|
T Consensus 217 lL~sYkGhkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd~~----------------~~sk~~~~~~v~v~dl~~h 279 (307)
T KOG0316|consen 217 LLKSYKGHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVDET----------------QISKLSVVSTVIVTDLSCH 279 (307)
T ss_pred HHHHhcccccceeeeeeeecccc-eeEEeccCCceEEEEEeccce----------------eeeeeccCCceeEEeeecc
Confidence 99999999775443 4555554 589999999999999998774 2333333333 48999999
Q ss_pred CCCCCEEEEEeCC
Q psy4510 480 PQLPGTIISTANS 492 (812)
Q Consensus 480 p~~~~~~~~~~~~ 492 (812)
|..+.++++++..
T Consensus 280 p~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 280 PTMDDFITATGHG 292 (307)
T ss_pred cCccceeEecCCc
Confidence 9987766666543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=252.87 Aligned_cols=283 Identities=21% Similarity=0.399 Sum_probs=234.1
Q ss_pred EEEEeCCCCCCeEEEe-------cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEee
Q psy4510 180 FAMDWSSTEPGVLATG-------DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHN 251 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~-------~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd 251 (812)
.++.|||--.++||++ ...|++.|-++...+.+. ...-..-.+.+..++|++.. ..+++++.||++++||
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~--e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d 89 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ--ECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFD 89 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE--EEEeeecccceeEeeecCCCcceEEEEecCceEEEec
Confidence 4689999766766654 346889999987443221 11122345789999999875 5778899999999999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
... +..|+..++.|..+|+++.|++.....+++++.|++|++|+...+. ...++.+|...|...+|+|..
T Consensus 90 ~~~------~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~----Sv~Tf~gh~~~Iy~a~~sp~~ 159 (311)
T KOG0277|consen 90 LTM------PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN----SVQTFNGHNSCIYQAAFSPHI 159 (311)
T ss_pred cCC------CCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc----ceEeecCCccEEEEEecCCCC
Confidence 665 4689999999999999999999887789999999999999998887 578899999999999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
+++|+++|.||++++||+|.. .+.+. + .+|...|.|+.|+.... +++||+.|+.|++||+|+. ..++..+.+|
T Consensus 160 ~nlfas~Sgd~~l~lwdvr~~--gk~~~-i-~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~--r~pl~eL~gh 233 (311)
T KOG0277|consen 160 PNLFASASGDGTLRLWDVRSP--GKFMS-I-EAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL--RTPLFELNGH 233 (311)
T ss_pred CCeEEEccCCceEEEEEecCC--CceeE-E-EeccceeEeecccccCCcEEEecCCCceEEEEehhhc--cccceeecCC
Confidence 999999999999999999964 33333 4 78999999999998765 9999999999999999984 4789999999
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIIST 489 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~ 489 (812)
.-.|..+.|+|....+|++++.|-+++|||....... +....++. -+..+.|++..++.++++
T Consensus 234 ~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~----------------~e~~~~HtEFv~g~Dws~~~~~~vAs~ 297 (311)
T KOG0277|consen 234 GLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSA----------------IETVDHHTEFVCGLDWSLFDPGQVAST 297 (311)
T ss_pred ceEEEEEecCcchhhHhhhccccceEEecccccchhh----------------hhhhhccceEEeccccccccCceeeec
Confidence 9999999999998889999999999999999866321 11111233 488899999999999999
Q ss_pred eCCCeEE
Q psy4510 490 ANSGFNI 496 (812)
Q Consensus 490 ~~~~~~~ 496 (812)
+-|+...
T Consensus 298 gWDe~l~ 304 (311)
T KOG0277|consen 298 GWDELLY 304 (311)
T ss_pred cccccee
Confidence 9887543
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=270.06 Aligned_cols=251 Identities=21% Similarity=0.343 Sum_probs=220.6
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
++.+.-..-+|.++.|-+ ..+.+++|+.|..|+||+.++.+ .++.+.+|.+-|+|++.+|...+++++|.|-+|+
T Consensus 48 VksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~e----kV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iK 122 (794)
T KOG0276|consen 48 VKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGE----KVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIK 122 (794)
T ss_pred eeeeeecccchhhheeee-ccceEEEecCCceEEEEecccce----eeEEeeccccceeeeeecCCCCeEEecCCccEEE
Confidence 333422345788899999 99999999999999999999998 7889999999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+|+.+. ...+.++|.||+.-|.+++|+|..++.+|+++-|++|+||.+.+.. +..++.+|...|+|+.|-
T Consensus 123 lW~we~------~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~----~nfTl~gHekGVN~Vdyy 192 (794)
T KOG0276|consen 123 LWDWEN------EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPH----PNFTLEGHEKGVNCVDYY 192 (794)
T ss_pred EeeccC------ceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCC----CceeeeccccCcceEEec
Confidence 999998 4789999999999999999999998999999999999999999887 678899999999999998
Q ss_pred CCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 329 PGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 329 p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
+.| +.+|++|+.|.+|+|||.+ ++.|+.++ .+|...|+.+.|+|.-+++++|+.||+++||...+ -+...++
T Consensus 193 ~~gdkpylIsgaDD~tiKvWDyQ---tk~CV~TL-eGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~T---y~lE~tL 265 (794)
T KOG0276|consen 193 TGGDKPYLISGADDLTIKVWDYQ---TKSCVQTL-EGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKT---YKLEKTL 265 (794)
T ss_pred cCCCcceEEecCCCceEEEeecc---hHHHHHHh-hcccccceEEEecCCCcEEEEecCCccEEEecCcc---eehhhhh
Confidence 765 2369999999999999998 68899998 89999999999999999999999999999999874 4445566
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
....+.|.+|+-.+.+ ..++.|...|.|. ..+-.
T Consensus 266 n~gleRvW~I~~~k~~-~~i~vG~Deg~i~-v~lgr 299 (794)
T KOG0276|consen 266 NYGLERVWCIAAHKGD-GKIAVGFDEGSVT-VKLGR 299 (794)
T ss_pred hcCCceEEEEeecCCC-CeEEEeccCCcEE-EEccC
Confidence 6667889999988875 5778887777554 44443
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=277.06 Aligned_cols=297 Identities=16% Similarity=0.311 Sum_probs=252.3
Q ss_pred CCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 165 ~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
+.+.+..+.||+..|.++.|.|..+.+|++||.|+.|+||++-.... +++++.+|..+|.+++|+.+|..+++++-|
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~---~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRR---CLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcc---eehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 45667888999999999999998899999999999999999988443 899999999999999999999999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.+++||.++| +++..+.. ...++++.|+|++++.+++|+.|+.|+.||++++. ..+.+..|-+.|.+
T Consensus 280 ~~lKlwDtETG-------~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k----vvqeYd~hLg~i~~ 347 (503)
T KOG0282|consen 280 RFLKLWDTETG-------QVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK----VVQEYDRHLGAILD 347 (503)
T ss_pred eeeeeeccccc-------eEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchH----HHHHHHhhhhheee
Confidence 99999999997 66666642 34678999999998999999999999999999998 67888899999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
+.|-+++++ |++.+.|++++||+.+.+- .+..+...+.....||..+|+++++++-+.|..|.++.+...-....-
T Consensus 348 i~F~~~g~r-FissSDdks~riWe~~~~v---~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkk 423 (503)
T KOG0282|consen 348 ITFVDEGRR-FISSSDDKSVRIWENRIPV---PIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKK 423 (503)
T ss_pred eEEccCCce-EeeeccCccEEEEEcCCCc---cchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHh
Confidence 999999995 9999999999999998543 233332344456778999999999999999999999998754344555
Q ss_pred EEcccCC--CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 405 ATFKHHT--APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 405 ~~~~~h~--~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
..|.+|. +.-..+.|||+| .+|++|..||.+.+||.++.+. +.....+...+..+.|||..
T Consensus 424 K~feGh~vaGys~~v~fSpDG-~~l~SGdsdG~v~~wdwkt~kl----------------~~~lkah~~~ci~v~wHP~e 486 (503)
T KOG0282|consen 424 KRFEGHSVAGYSCQVDFSPDG-RTLCSGDSDGKVNFWDWKTTKL----------------VSKLKAHDQPCIGVDWHPVE 486 (503)
T ss_pred hhhcceeccCceeeEEEcCCC-CeEEeecCCccEEEeechhhhh----------------hhccccCCcceEEEEecCCC
Confidence 6778884 456778999998 6999999999999999998753 22233345689999999999
Q ss_pred CCEEEEEeCCCeEEE
Q psy4510 483 PGTIISTANSGFNIF 497 (812)
Q Consensus 483 ~~~~~~~~~~~~~~~ 497 (812)
+..+++++-+|..-+
T Consensus 487 ~Skvat~~w~G~Iki 501 (503)
T KOG0282|consen 487 PSKVATCGWDGLIKI 501 (503)
T ss_pred cceeEecccCceeEe
Confidence 999999998886544
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-34 Score=277.41 Aligned_cols=298 Identities=21% Similarity=0.382 Sum_probs=239.9
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+.+.++++.||+..|.++.|.|....+|++|+.|+.|+||++...+. +.+++.+|..+|.+++|+++|.. |+|++.
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~---~lrtf~gH~k~Vrd~~~s~~g~~-fLS~sf 278 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRR---CLRTFKGHRKPVRDASFNNCGTS-FLSASF 278 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcc---eehhhhcchhhhhhhhccccCCe-eeeeec
Confidence 34778899999999999999995448999999999999999988443 78999999999999999999995 999999
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
|+.|++||+.+ +.++..+ .....++|+.|+|++ +.|++|+.|+.|+.||+| .+..++.+..|-+.|..+.|
T Consensus 279 D~~lKlwDtET---G~~~~~f--~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiR---s~kvvqeYd~hLg~i~~i~F 350 (503)
T KOG0282|consen 279 DRFLKLWDTET---GQVLSRF--HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIR---SGKVVQEYDRHLGAILDITF 350 (503)
T ss_pred ceeeeeecccc---ceEEEEE--ecCCCceeeecCCCCCcEEEEecCCCcEEEEecc---chHHHHHHHhhhhheeeeEE
Confidence 99999999994 5566655 235578999999999 699999999999999999 57788999999999999999
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
-+.+ ..+++++.|+.++||+.+..... . .......-...++..+|+++++++-+-...+.+|..
T Consensus 351 ~~~g-~rFissSDdks~riWe~~~~v~i--------------k-~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~ 414 (503)
T KOG0282|consen 351 VDEG-RRFISSSDDKSVRIWENRIPVPI--------------K-NIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFST 414 (503)
T ss_pred ccCC-ceEeeeccCccEEEEEcCCCccc--------------h-hhcchhhccCcceecCCCCCeehhhccCceEEEEec
Confidence 9987 68999999999999999877431 1 111111224667778888765444443333444332
Q ss_pred CCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc
Q psy4510 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM 579 (812)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (812)
..... ...
T Consensus 415 ~~~~r------------------------------------------------------------------------~nk 422 (503)
T KOG0282|consen 415 VPPFR------------------------------------------------------------------------LNK 422 (503)
T ss_pred ccccc------------------------------------------------------------------------cCH
Confidence 11100 001
Q ss_pred ceEEeccc--ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC
Q psy4510 580 NSYFIRHR--GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 657 (812)
Q Consensus 580 ~~~~~~h~--~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~ 657 (812)
...+.+|. +.-..+.|||||.+|++| +.||.+.+||..+.+ ++..+++|..
T Consensus 423 kK~feGh~vaGys~~v~fSpDG~~l~SG--dsdG~v~~wdwkt~k-------------------------l~~~lkah~~ 475 (503)
T KOG0282|consen 423 KKRFEGHSVAGYSCQVDFSPDGRTLCSG--DSDGKVNFWDWKTTK-------------------------LVSKLKAHDQ 475 (503)
T ss_pred hhhhcceeccCceeeEEEcCCCCeEEee--cCCccEEEeechhhh-------------------------hhhccccCCc
Confidence 23445553 456678999999999999 899999999999887 7888999999
Q ss_pred ceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 658 EGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 658 ~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
.+..+.|+|.....+||++.||.|++|+
T Consensus 476 ~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 476 PCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ceEEEEecCCCcceeEecccCceeEecC
Confidence 9999999998888999999999999996
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=263.76 Aligned_cols=294 Identities=23% Similarity=0.383 Sum_probs=240.5
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+.|.-.......|+|+.+ +...+++|..|++|+|||.++.. +.+.|.||++.|.|+.|.. +.|++|+.|.+
T Consensus 188 ~rinc~Se~skgVYClQY---DD~kiVSGlrDnTikiWD~n~~~----c~~~L~GHtGSVLCLqyd~--rviisGSSDsT 258 (499)
T KOG0281|consen 188 QRINCRSENSKGVYCLQY---DDEKIVSGLRDNTIKIWDKNSLE----CLKILTGHTGSVLCLQYDE--RVIVSGSSDST 258 (499)
T ss_pred eeecCCcccCCceEEEEe---cchhhhcccccCceEEeccccHH----HHHhhhcCCCcEEeeeccc--eEEEecCCCce
Confidence 344444334578999997 66889999999999999998876 8899999999999999864 48999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|+|||++++ +++.++.+|...|..+.|+. +++++++.|.+|.+||+.+.. ...+.+.+.||...|+.+.
T Consensus 259 vrvWDv~tg-------e~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps-~it~rrVLvGHrAaVNvVd 327 (499)
T KOG0281|consen 259 VRVWDVNTG-------EPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVD 327 (499)
T ss_pred EEEEeccCC-------chhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCch-HHHHHHHHhhhhhheeeec
Confidence 999999997 89999999999999999986 799999999999999998876 2335678899999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+. + ++++++.|.+|++|++. +..++.++ .+|...|.|+.+. ++++++|+.|.+|++||+. .+.++..
T Consensus 328 fd~--k-yIVsASgDRTikvW~~s---t~efvRtl-~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~---~G~cLRv 395 (499)
T KOG0281|consen 328 FDD--K-YIVSASGDRTIKVWSTS---TCEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRV 395 (499)
T ss_pred ccc--c-eEEEecCCceEEEEecc---ceeeehhh-hcccccceehhcc--CeEEEecCCCceEEEEecc---ccHHHHH
Confidence 974 3 79999999999999998 56677777 8999999999875 7899999999999999998 6899999
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+++|..-|.++.|.. ..+++|+.||+|++||+....+...... ..-+...-.+.+.|..+.|... .+
T Consensus 396 LeGHEeLvRciRFd~---krIVSGaYDGkikvWdl~aaldpra~~~-------~~Cl~~lv~hsgRVFrLQFD~f---qI 462 (499)
T KOG0281|consen 396 LEGHEELVRCIRFDN---KRIVSGAYDGKIKVWDLQAALDPRAPAS-------TLCLRTLVEHSGRVFRLQFDEF---QI 462 (499)
T ss_pred HhchHHhhhheeecC---ceeeeccccceEEEEecccccCCccccc-------chHHHhhhhccceeEEEeecce---EE
Confidence 999999999999974 4799999999999999988754311100 0012222233457888998874 55
Q ss_pred EEEeC-CCeEEEEeCCCCCc
Q psy4510 487 ISTAN-SGFNIFRTISDLPS 505 (812)
Q Consensus 487 ~~~~~-~~~~~~~~~~~~~~ 505 (812)
++++. +.+.+|+..+..+.
T Consensus 463 vsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 463 ISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred EeccCCCeEEEEEcCCCCcc
Confidence 55554 55666666555443
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-30 Score=251.04 Aligned_cols=466 Identities=15% Similarity=0.159 Sum_probs=325.6
Q ss_pred CCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 163 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 163 ~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
+++.+-+.-++|+.-+. .+-+-| .|.++.--. +.+.+++.+.. .++...+|+..|.|++.+|+.-.+++|-
T Consensus 53 kl~LewvygYRG~dcR~-Nly~lp-tgE~vyfvA--~V~Vl~n~ee~-----~Qr~y~GH~ddikc~~vHPdri~vatGQ 123 (626)
T KOG2106|consen 53 KLKLEWVYGYRGVDCRN-NLYLLP-TGELVYFVA--AVGVLYNWEER-----SQRHYLGHNDDIKCMAVHPDRIRVATGQ 123 (626)
T ss_pred CceeEEEEeecceeeec-eeEEcc-CccEEEEec--cEEEEEeehhh-----hcccccCCCCceEEEeecCCceeeccCc
Confidence 33444455555554332 355667 776654332 24667776543 3567889999999999999998888776
Q ss_pred CCC--------ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE---eCCCcEEEEeCCCCCcceec
Q psy4510 243 DPF--------QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG---DCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 243 ~d~--------~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg---~~dg~i~vwd~~~~~~~~~~ 311 (812)
..+ .+++||..+- ..++.+..-...|.+++|++.+.+-++.. +.+..+.+||...+. .
T Consensus 124 ~ag~~g~~~~phvriWdsv~L-------~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~----~ 192 (626)
T KOG2106|consen 124 GAGTSGRPLQPHVRIWDSVTL-------STLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKA----K 192 (626)
T ss_pred ccccCCCcCCCeeeecccccc-------eeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhh----c
Confidence 544 3899997663 55666666677899999998654443333 345568899998876 4
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
....+.....|....|+|.+++++++++. |.+.+|+.+.+...+....+......-|.|++|.++|. +++|..+|.|.
T Consensus 193 ~~~vk~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~ 270 (626)
T KOG2106|consen 193 LGPVKTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNIL 270 (626)
T ss_pred cCcceeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEE
Confidence 55566677789999999999998888775 89999999876554444445444457799999999985 78999999999
Q ss_pred EEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC
Q psy4510 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK 471 (812)
Q Consensus 392 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (812)
||+.+. .+..+....|.+.|.+++...+| .|++|+.|+.|..||-...+.. ...+|.+ .+
T Consensus 271 Iw~~~~---~~~~k~~~aH~ggv~~L~~lr~G--tllSGgKDRki~~Wd~~y~k~r--------~~elPe~-------~G 330 (626)
T KOG2106|consen 271 IWSKGT---NRISKQVHAHDGGVFSLCMLRDG--TLLSGGKDRKIILWDDNYRKLR--------ETELPEQ-------FG 330 (626)
T ss_pred EEeCCC---ceEEeEeeecCCceEEEEEecCc--cEeecCccceEEeccccccccc--------cccCchh-------cC
Confidence 999974 44455555999999999999886 5777999999999993333211 0111111 11
Q ss_pred ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcc
Q psy4510 472 EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTS 551 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~ 551 (812)
.|..++ +..+.+++.++.+. .+. ++-.
T Consensus 331 ~iRtv~--e~~~di~vGTtrN~-iL~----------------------------------Gt~~---------------- 357 (626)
T KOG2106|consen 331 PIRTVA--EGKGDILVGTTRNF-ILQ----------------------------------GTLE---------------- 357 (626)
T ss_pred CeeEEe--cCCCcEEEeeccce-EEE----------------------------------eeec----------------
Confidence 222222 11112222222211 111 0000
Q ss_pred cccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccc
Q psy4510 552 TEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQL 631 (812)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~ 631 (812)
........+|......++.+|+...++++ +.|+.+++|+ .. +
T Consensus 358 -------------------------~~f~~~v~gh~delwgla~hps~~q~~T~--gqdk~v~lW~-~~-k--------- 399 (626)
T KOG2106|consen 358 -------------------------NGFTLTVQGHGDELWGLATHPSKNQLLTC--GQDKHVRLWN-DH-K--------- 399 (626)
T ss_pred -------------------------CCceEEEEecccceeeEEcCCChhheeec--cCcceEEEcc-CC-c---------
Confidence 11234567777888899999999999998 9999999999 22 2
Q ss_pred cccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC---------CceeEEEEecCCCC
Q psy4510 632 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---------AGAWSVYLYTNRFG 702 (812)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~---------~~~~~~~~~s~dg~ 702 (812)
++.+. --..++.+++|+| .+ .+|.|...|...+.|.++ ++.++++.|+|+|.
T Consensus 400 ----------------~~wt~-~~~d~~~~~~fhp-sg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~ 460 (626)
T KOG2106|consen 400 ----------------LEWTK-IIEDPAECADFHP-SG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGA 460 (626)
T ss_pred ----------------eeEEE-EecCceeEeeccC-cc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCC
Confidence 22221 1345889999999 66 999999999999999987 56678889999999
Q ss_pred EEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEEeeeeeEEE
Q psy4510 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCIFV 782 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~ 782 (812)
+||+|+.|+.|+||.+..++..-.......| .+|+.|.||+|++ +|.+-|.|..|..|.-...+ ...+ ..-+.
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ithLDwS~Ds~-~~~~~S~d~eiLyW~~~~~~--~~ts--~kDvk 533 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--SPITHLDWSSDSQ-FLVSNSGDYEILYWKPSECK--QITS--VKDVK 533 (626)
T ss_pred EEEEecCCCeEEEEEECCCCcEEEEeeeecC--ceeEEeeecCCCc-eEEeccCceEEEEEccccCc--ccce--eccee
Confidence 9999999999999999887652212223333 8999999999999 89999999999999322222 1112 45556
Q ss_pred eeecc
Q psy4510 783 WLKYQ 787 (812)
Q Consensus 783 w~~~~ 787 (812)
|..++
T Consensus 534 W~t~~ 538 (626)
T KOG2106|consen 534 WATYT 538 (626)
T ss_pred eeeeE
Confidence 66554
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-30 Score=265.96 Aligned_cols=257 Identities=19% Similarity=0.309 Sum_probs=224.8
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
.|..|.+|.++|..++|+| .+.++++||.|-.|++|+..+.. ++.+|.||-+-|+.+.|++.-.+++++|.|.+|
T Consensus 43 li~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rr----clftL~GHlDYVRt~~FHheyPWIlSASDDQTI 117 (1202)
T KOG0292|consen 43 LIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRR----CLFTLLGHLDYVRTVFFHHEYPWILSASDDQTI 117 (1202)
T ss_pred HHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccce----ehhhhccccceeEEeeccCCCceEEEccCCCeE
Confidence 4556678999999999999 99999999999999999999877 889999999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc--------------------
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------------------- 307 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-------------------- 307 (812)
+||+..++ +++..++||..-|.|..|+|.. .+++|+|-|.+|+|||+..-+.
T Consensus 118 rIWNwqsr-------~~iavltGHnHYVMcAqFhptE-DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~d 189 (1202)
T KOG0292|consen 118 RIWNWQSR-------KCIAVLTGHNHYVMCAQFHPTE-DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSD 189 (1202)
T ss_pred EEEeccCC-------ceEEEEecCceEEEeeccCCcc-ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchh
Confidence 99999986 8999999999999999999987 7999999999999999853221
Q ss_pred -----ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE
Q psy4510 308 -----WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 308 -----~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 382 (812)
-.+....+.||...|+-++|+|.-+ +|+||+.|+.|++|.....+ ...+-+. .+|.+.|.++-|+|..++++
T Consensus 190 Lfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnetK-aWEvDtc-rgH~nnVssvlfhp~q~lIl 266 (1202)
T KOG0292|consen 190 LFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK-AWEVDTC-RGHYNNVSSVLFHPHQDLIL 266 (1202)
T ss_pred hcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEecccc-ceeehhh-hcccCCcceEEecCccceeE
Confidence 1122345678999999999999998 89999999999999987432 2234444 79999999999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+.|.|++|+|||+. ....+++|+...+....++-+|.. ++++ ++.|+-+.+|-+...+
T Consensus 267 SnsEDksirVwDm~---kRt~v~tfrrendRFW~laahP~l-NLfA-AgHDsGm~VFkleREr 324 (1202)
T KOG0292|consen 267 SNSEDKSIRVWDMT---KRTSVQTFRRENDRFWILAAHPEL-NLFA-AGHDSGMIVFKLERER 324 (1202)
T ss_pred ecCCCccEEEEecc---cccceeeeeccCCeEEEEEecCCc-ceee-eecCCceEEEEEcccC
Confidence 99999999999998 578899998888899999999986 4554 5567778899988664
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=261.66 Aligned_cols=285 Identities=21% Similarity=0.370 Sum_probs=240.2
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
....|+|+.+. ...+++|..|.+|+|||..+. .++..+.||++.|.|+.|.. ..+++|+.|.+|+|||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~-------~c~~~L~GHtGSVLCLqyd~---rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSL-------ECLKILTGHTGSVLCLQYDE---RVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccH-------HHHHhhhcCCCcEEeeeccc---eEEEecCCCceEEEEe
Confidence 34578999874 346899999999999999874 88899999999999999975 6999999999999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
+++++ ...++.+|...|..+.|+.. ++++|+.|.+|++||+.......+...+ .+|...|+.+.|+ .+++
T Consensus 264 v~tge----~l~tlihHceaVLhlrf~ng---~mvtcSkDrsiaVWdm~sps~it~rrVL-vGHrAaVNvVdfd--~kyI 333 (499)
T KOG0281|consen 264 VNTGE----PLNTLIHHCEAVLHLRFSNG---YMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDFD--DKYI 333 (499)
T ss_pred ccCCc----hhhHHhhhcceeEEEEEeCC---EEEEecCCceeEEEeccCchHHHHHHHH-hhhhhheeeeccc--cceE
Confidence 99998 78899999999999999853 7999999999999999876644444444 8999999999997 4499
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
++++.|.+|++|++. +...+.++.+|+..|.++++. ++++++|+.|.+|++||+..+..
T Consensus 334 VsASgDRTikvW~~s---t~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~c--------------- 392 (499)
T KOG0281|consen 334 VSASGDRTIKVWSTS---TCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC--------------- 392 (499)
T ss_pred EEecCCceEEEEecc---ceeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHH---------------
Confidence 999999999999998 678899999999999999886 36999999999999999987632
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
T Consensus 393 -------------------------------------------------------------------------------- 392 (499)
T KOG0281|consen 393 -------------------------------------------------------------------------------- 392 (499)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
.+.+.+|..-|.++.| +.+++++| +.||+|++||+..+
T Consensus 393 --------------------------------------LRvLeGHEeLvRciRF--d~krIVSG--aYDGkikvWdl~aa 430 (499)
T KOG0281|consen 393 --------------------------------------LRVLEGHEELVRCIRF--DNKRIVSG--AYDGKIKVWDLQAA 430 (499)
T ss_pred --------------------------------------HHHHhchHHhhhheee--cCceeeec--cccceEEEEecccc
Confidence 2345566667777777 45679998 89999999999988
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~ 690 (812)
.+.. ......++.++..|++.|..+.|. ...+++++.|.+|.|||...+.
T Consensus 431 ldpr----------------a~~~~~Cl~~lv~hsgRVFrLQFD---~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 431 LDPR----------------APASTLCLRTLVEHSGRVFRLQFD---EFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred cCCc----------------ccccchHHHhhhhccceeEEEeec---ceEEEeccCCCeEEEEEcCCCC
Confidence 6431 122334788889999999999995 4689999999999999986543
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-29 Score=256.50 Aligned_cols=504 Identities=15% Similarity=0.149 Sum_probs=342.2
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
..+|+|+|||. ..+.||.+-.+|.|-||++...= .+...+.+++ ..|.+++|+ .+..|.+.+.+|.|.-||+.+
T Consensus 25 Ps~I~slA~s~-kS~~lAvsRt~g~IEiwN~~~~w---~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 25 PSEIVSLAYSH-KSNQLAVSRTDGNIEIWNLSNNW---FLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHT 99 (691)
T ss_pred ccceEEEEEec-cCCceeeeccCCcEEEEccCCCc---eeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEeccc
Confidence 37899999999 88889999999999999998742 1344455554 579999999 555688999999999999998
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+ ++++.+....+.|++++.+|.+ ..++.|+.||.+..+++..+. ....+.+...++.|.++.|+|++..
T Consensus 100 l-------k~~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~--I~~~r~l~rq~sRvLslsw~~~~~~- 168 (691)
T KOG2048|consen 100 L-------KQKYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDK--ITYKRSLMRQKSRVLSLSWNPTGTK- 168 (691)
T ss_pred C-------ceeEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCce--EEEEeecccccceEEEEEecCCccE-
Confidence 6 8888888888999999999998 899999999977777766554 2234455556789999999999985
Q ss_pred EEEEECCCeEEEEECCCCCcccc----eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSC----MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
+++|+.||.|++||+..+.+... +..+......-|.++.|-.++ .|++|...|+|.+||.. .+..+..+..|
T Consensus 169 i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~---~gTLiqS~~~h 244 (691)
T KOG2048|consen 169 IAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSI---FGTLIQSHSCH 244 (691)
T ss_pred EEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEccc---Ccchhhhhhhh
Confidence 99999999999999986554331 111212233446777777555 89999999999999998 57889999999
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
.+.|.+++..+++ ..++++|.|++|..+...+.+..- . .......+...|.+++..++ .+++++
T Consensus 245 ~adVl~Lav~~~~-d~vfsaGvd~~ii~~~~~~~~~~w--------v----~~~~r~~h~hdvrs~av~~~---~l~sgG 308 (691)
T KOG2048|consen 245 DADVLALAVADNE-DRVFSAGVDPKIIQYSLTTNKSEW--------V----INSRRDLHAHDVRSMAVIEN---ALISGG 308 (691)
T ss_pred hcceeEEEEcCCC-CeEEEccCCCceEEEEecCCccce--------e----eeccccCCcccceeeeeecc---eEEecc
Confidence 9999999999986 589999999999999888774310 0 01111122336888888886 777777
Q ss_pred CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCC
Q psy4510 491 NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGD 570 (812)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 570 (812)
.+....+......+..--.. -...|. ...+.++... +.+-+|. .....+|.........
T Consensus 309 ~d~~l~i~~s~~~~~~~h~~---------~~~~p~--~~~v~~a~~~----~L~~~w~------~h~v~lwrlGS~~~~g 367 (691)
T KOG2048|consen 309 RDFTLAICSSREFKNMDHRQ---------KNLFPA--SDRVSVAPEN----RLLVLWK------AHGVDLWRLGSVILQG 367 (691)
T ss_pred eeeEEEEccccccCchhhhc---------cccccc--cceeecCccc----eEEEEec------cccccceeccCccccc
Confidence 77765554333211100000 001111 1111111111 1111111 0011111111110000
Q ss_pred ccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee
Q psy4510 571 EDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 650 (812)
Q Consensus 571 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (812)
......+..........|.+.+.||+|+.++.++ =.+++||.++..... ....+.
T Consensus 368 --~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st---~~~~~iy~L~~~~~v--------------------k~~~v~ 422 (691)
T KOG2048|consen 368 --EYNYIHLLKLFTKEKENISCAAISPDGNLIAIST---VSRTKIYRLQPDPNV--------------------KVINVD 422 (691)
T ss_pred --ccChhhheeeecCCccceeeeccCCCCCEEEEee---ccceEEEEeccCcce--------------------eEEEec
Confidence 0011223344455567899999999999999873 457888888764210 000111
Q ss_pred eecCCCCceEEEEeCCCCCCeEEecC-CCceEEEEecCC--------------CceeEEEEecCCCCEEEeecCCCeEEE
Q psy4510 651 SFSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPRE--------------AGAWSVYLYTNRFGVLATGDCKRNIHI 715 (812)
Q Consensus 651 ~~~gh~~~V~~l~~sp~~~~~las~s-~Dg~v~iWd~~~--------------~~~~~~~~~s~dg~~lasgs~dg~i~i 715 (812)
....-...+..+.|+- ++..++.++ .+..+.+.++++ ...++.++.|++|+|||+.+..|.|++
T Consensus 423 ~~~~~~~~a~~i~fti-d~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v 501 (691)
T KOG2048|consen 423 DVPLALLDASAISFTI-DKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFV 501 (691)
T ss_pred cchhhhccceeeEEEe-cCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEE
Confidence 1122223667788888 444544444 778888888876 223566789999999999999999999
Q ss_pred eecCCCCCccccccccc-CCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 716 WTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 716 wd~~~~~~~~~~~~~~~-gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
|++.+.+. +.+. .-...|++++|+|....-|+.+-.|+.+.-+|+.+
T Consensus 502 ~nl~~~~~-----~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~efdi~~ 549 (691)
T KOG2048|consen 502 YNLETLES-----HLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEFDIEA 549 (691)
T ss_pred EEccccee-----ecchhccCcceeeeeccccccCcEEEEecCCeEEEEecch
Confidence 99998763 2222 33478999999965543689999999999999843
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=257.17 Aligned_cols=297 Identities=20% Similarity=0.321 Sum_probs=236.9
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+.+..+.+..|+.+|+-+.||++| .+||+++.|.+..+|.+..... .....++.+|..+|..+.|+|+.++ |++|+.
T Consensus 213 p~qt~qil~~htdEVWfl~FS~nG-kyLAsaSkD~Taiiw~v~~d~~-~kl~~tlvgh~~~V~yi~wSPDdry-LlaCg~ 289 (519)
T KOG0293|consen 213 PSQTWQILQDHTDEVWFLQFSHNG-KYLASASKDSTAIIWIVVYDVH-FKLKKTLVGHSQPVSYIMWSPDDRY-LLACGF 289 (519)
T ss_pred CchhhhhHhhCCCcEEEEEEcCCC-eeEeeccCCceEEEEEEecCcc-eeeeeeeecccCceEEEEECCCCCe-EEecCc
Confidence 345567788999999999999999 8999999999999999877654 3357889999999999999999994 888888
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC-CCEEEEEE
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT-APVTTVEW 419 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~v~~ 419 (812)
|..+.+||+.+ +.+...++.++...+.+++|.|+|..+++|+.|+.+..||+. +..+...++-. ..|.+++.
T Consensus 290 ~e~~~lwDv~t---gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD----gn~~~~W~gvr~~~v~dlai 362 (519)
T KOG0293|consen 290 DEVLSLWDVDT---GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD----GNILGNWEGVRDPKVHDLAI 362 (519)
T ss_pred hHheeeccCCc---chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC----cchhhcccccccceeEEEEE
Confidence 99999999995 445566666678899999999999999999999999999995 55566665543 46899999
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.++|. .+++.+.|..|++++.....+. .....+.+|++++.+.++...++.-....+.+|+.
T Consensus 363 t~Dgk-~vl~v~~d~~i~l~~~e~~~dr-----------------~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 363 TYDGK-YVLLVTVDKKIRLYNREARVDR-----------------GLISEEQPITSFSISKDGKLALVNLQDQEIHLWDL 424 (519)
T ss_pred cCCCc-EEEEEecccceeeechhhhhhh-----------------ccccccCceeEEEEcCCCcEEEEEcccCeeEEeec
Confidence 99985 6777778999999998766321 12233568999999999888888888888888765
Q ss_pred CCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc
Q psy4510 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM 579 (812)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (812)
......+.
T Consensus 425 ~e~~lv~k------------------------------------------------------------------------ 432 (519)
T KOG0293|consen 425 EENKLVRK------------------------------------------------------------------------ 432 (519)
T ss_pred chhhHHHH------------------------------------------------------------------------
Confidence 43222221
Q ss_pred ceEEecccc--eEEEEEEec-cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC
Q psy4510 580 NSYFIRHRG--CINRVRTCQ-YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 656 (812)
Q Consensus 580 ~~~~~~h~~--~v~~l~~s~-~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~ 656 (812)
..+|.. -+..-+|-- +.+++++| ++|+.|+||+..+++ ++.++.||.
T Consensus 433 ---Y~Ghkq~~fiIrSCFgg~~~~fiaSG--SED~kvyIWhr~sgk-------------------------ll~~LsGHs 482 (519)
T KOG0293|consen 433 ---YFGHKQGHFIIRSCFGGGNDKFIASG--SEDSKVYIWHRISGK-------------------------LLAVLSGHS 482 (519)
T ss_pred ---hhcccccceEEEeccCCCCcceEEec--CCCceEEEEEccCCc-------------------------eeEeecCCc
Confidence 222211 122222322 33567777 999999999999988 899999999
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
..|.+|+|+|.++.++||||.||+||||...
T Consensus 483 ~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 483 KTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 9999999999999999999999999999874
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=256.02 Aligned_cols=297 Identities=19% Similarity=0.236 Sum_probs=241.2
Q ss_pred CCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 162 ~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
-+++.+....+..|+++|+-+.||+ +|++||||+.|.+..||.+..... ....+++.+|..+|..+.||||.++|++|
T Consensus 210 ~qip~qt~qil~~htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~-~kl~~tlvgh~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 210 LQIPSQTWQILQDHTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVH-FKLKKTLVGHSQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred ccCCchhhhhHhhCCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcc-eeeeeeeecccCceEEEEECCCCCeEEec
Confidence 4556677777888999999999999 999999999999999999877664 33678899999999999999999999999
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC-
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT- 319 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~- 319 (812)
+.+..+++||+.+| .....+ .+|...+.+++|.||| ..+++|+.|++|..||+.... .....+-.
T Consensus 288 g~~e~~~lwDv~tg-------d~~~~y~~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i~~wdlDgn~-----~~~W~gvr~ 354 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTG-------DLRHLYPSGLGFSVSSCAWCPDG-FRFVTGSPDRTIIMWDLDGNI-----LGNWEGVRD 354 (519)
T ss_pred CchHheeeccCCcc-------hhhhhcccCcCCCcceeEEccCC-ceeEecCCCCcEEEecCCcch-----hhccccccc
Confidence 99999999999997 333332 2356789999999999 789999999999999998653 33333332
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
..|.+++.+++|++ +++.+.|..|++++..+. .+... .....+|++++.+.+++++++--.+..|++||+.
T Consensus 355 ~~v~dlait~Dgk~-vl~v~~d~~i~l~~~e~~---~dr~l--ise~~~its~~iS~d~k~~LvnL~~qei~LWDl~--- 425 (519)
T KOG0293|consen 355 PKVHDLAITYDGKY-VLLVTVDKKIRLYNREAR---VDRGL--ISEEQPITSFSISKDGKLALVNLQDQEIHLWDLE--- 425 (519)
T ss_pred ceeEEEEEcCCCcE-EEEEecccceeeechhhh---hhhcc--ccccCceeEEEEcCCCcEEEEEcccCeeEEeecc---
Confidence 46999999999996 556668999999998742 22212 2345689999999999999999999999999998
Q ss_pred CCCceEEcccCCCC--EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 400 KGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 400 ~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
....+..+.+|+.. |..-+|--.+..++++|+.|+.|+||+..+++ .+....++.+.|++++
T Consensus 426 e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk----------------ll~~LsGHs~~vNcVs 489 (519)
T KOG0293|consen 426 ENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK----------------LLAVLSGHSKTVNCVS 489 (519)
T ss_pred hhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCc----------------eeEeecCCcceeeEEe
Confidence 46778888888654 44556766556799999999999999999884 2233333445899999
Q ss_pred EcCCCCCEEEEEeCCCeEEEE
Q psy4510 478 WHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~~~~ 498 (812)
|+|..|.+++++++|+....|
T Consensus 490 wNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 490 WNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred cCCCCHHHhhccCCCCeEEEe
Confidence 999999999999999864444
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=284.76 Aligned_cols=285 Identities=25% Similarity=0.380 Sum_probs=235.3
Q ss_pred ccCcCCC-CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 169 LFSFSGH-LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh-~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
...+.+| ...|.++.|+| +|+.|++++.++.+++|+...... ...+.+.+|...|++++|+|+++++++++.|++|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~-~g~~l~~~~~~~~i~~~~~~~~~~--~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSP-DGRALAAASSDGLIRIWKLEGIKS--NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred eeeecccccCceEEEEEcC-CCCeEEEccCCCcEEEeecccccc--hhhccccccccceeeeEECCCCcEEEEecCCceE
Confidence 3334344 78899999999 999999999999999999965542 3556669999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
+|||+.. ....++++++|...|++++|+|++ .++++|+.|++|+|||++++. +...+.+|.+.|++++|
T Consensus 228 riwd~~~------~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~----~~~~l~~hs~~is~~~f 296 (456)
T KOG0266|consen 228 RIWDLKD------DGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGE----CVRKLKGHSDGISGLAF 296 (456)
T ss_pred EEeeccC------CCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCe----EEEeeeccCCceEEEEE
Confidence 9999954 247889999999999999999999 999999999999999999976 78889999999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS--DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
++++. +|++++.|+.|++||+.++... ++..+ ..+.. .++++.|+|++.++++++.|+.+++||++ ....+.
T Consensus 297 ~~d~~-~l~s~s~d~~i~vwd~~~~~~~-~~~~~-~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~---~~~~~~ 370 (456)
T KOG0266|consen 297 SPDGN-LLVSASYDGTIRVWDLETGSKL-CLKLL-SGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLR---SGKSVG 370 (456)
T ss_pred CCCCC-EEEEcCCCccEEEEECCCCcee-eeecc-cCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEcc---CCccee
Confidence 99999 6899999999999999965422 33444 33333 59999999999999999999999999998 467788
Q ss_pred EcccCCCC---EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 406 TFKHHTAP---VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 406 ~~~~h~~~---v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
.+.+|... +.+...++.+ .++++|+.|+.|.+||+.+.... +.+..|. ...+..+.|+|..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~-~~i~sg~~d~~v~~~~~~s~~~~--------------~~l~~h~-~~~~~~~~~~~~~ 434 (456)
T KOG0266|consen 371 TYTGHSNLVRCIFSPTLSTGG-KLIYSGSEDGSVYVWDSSSGGIL--------------QRLEGHS-KAAVSDLSSHPTE 434 (456)
T ss_pred eecccCCcceeEecccccCCC-CeEEEEeCCceEEEEeCCccchh--------------hhhcCCC-CCceeccccCCCc
Confidence 88888764 3344445655 69999999999999999986321 2222222 4678999999987
Q ss_pred CCEEEEEe
Q psy4510 483 PGTIISTA 490 (812)
Q Consensus 483 ~~~~~~~~ 490 (812)
+ ++++.+
T Consensus 435 ~-~~~s~s 441 (456)
T KOG0266|consen 435 N-LIASSS 441 (456)
T ss_pred C-eeeecC
Confidence 5 444444
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-30 Score=266.67 Aligned_cols=287 Identities=30% Similarity=0.515 Sum_probs=241.7
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
..+.+|..+|++++|+|++++|++++.++.+++|++.++ .....+.+|...+..+.|+|++ ..|++++.+|.
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~ 74 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETG-------ELLRTLKGHTGPVRDVAASADG-TYLASGSSDKT 74 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCC-------CcEEEEecCCcceeEEEECCCC-CEEEEEcCCCe
Confidence 457799999999999999999999999999999999874 5777888999999999999998 79999999999
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
|++|++..+. ....+..|...|.++.|+|++. ++++++.+|.|++||++. ......+ ..|...+.+++|+|
T Consensus 75 i~i~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~~~---~~~~~~~-~~~~~~i~~~~~~~ 145 (289)
T cd00200 75 IRLWDLETGE----CVRTLTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVET---GKCLTTL-RGHTDWVNSVAFSP 145 (289)
T ss_pred EEEEEcCccc----ceEEEeccCCcEEEEEEcCCCC-EEEEecCCCeEEEEECCC---cEEEEEe-ccCCCcEEEEEEcC
Confidence 9999999865 4566778888999999999976 688888899999999983 3344555 57888999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhh
Q psy4510 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL 456 (812)
Q Consensus 377 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 456 (812)
++.++++++.+|.|++||++ ..+.+..+..|...|.++.|+|++ ..+++++.++.|++||+...+.
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~d~~~~~~---------- 211 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLR---TGKCVATLTGHTGEVNSVAFSPDG-EKLLSSSSDGTIKLWDLSTGKC---------- 211 (289)
T ss_pred cCCEEEEEcCCCcEEEEEcc---ccccceeEecCccccceEEECCCc-CEEEEecCCCcEEEEECCCCce----------
Confidence 98899998889999999998 456777888899999999999987 5788888899999999875411
Q ss_pred ccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCC
Q psy4510 457 KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 536 (812)
Q Consensus 457 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~ 536 (812)
.
T Consensus 212 -------~------------------------------------------------------------------------ 212 (289)
T cd00200 212 -------L------------------------------------------------------------------------ 212 (289)
T ss_pred -------e------------------------------------------------------------------------
Confidence 0
Q ss_pred CceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEE
Q psy4510 537 GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIW 616 (812)
Q Consensus 537 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iw 616 (812)
..+..|...+.+++|+|++..++++ +.+|.|++|
T Consensus 213 --------------------------------------------~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~i~ 246 (289)
T cd00200 213 --------------------------------------------GTLRGHENGVNSVAFSPDGYLLASG--SEDGTIRVW 246 (289)
T ss_pred --------------------------------------------cchhhcCCceEEEEEcCCCcEEEEE--cCCCcEEEE
Confidence 0011223367778888887777776 679999999
Q ss_pred eccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 617 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 617 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
++.+.. ++..+.+|...|.+++|+| ++.+|++++.|+.|++|+
T Consensus 247 ~~~~~~-------------------------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 247 DLRTGE-------------------------CVQTLSGHTNSVTSLAWSP-DGKRLASGSADGTIRIWD 289 (289)
T ss_pred EcCCce-------------------------eEEEccccCCcEEEEEECC-CCCEEEEecCCCeEEecC
Confidence 998765 5667778999999999999 788999999999999996
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-31 Score=283.17 Aligned_cols=290 Identities=25% Similarity=0.403 Sum_probs=241.1
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
|...|.++.|+++|+.|++++.++.+++|+..... ......+.+|...|..++|+|++ .++++|+.|++|+|||
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~-----~~~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd 231 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIK-----SNLLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWD 231 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCCCcEEEeeccccc-----chhhccccccccceeeeEECCCC-cEEEEecCCceEEEee
Confidence 47899999999999999999999999999996641 12666778999999999999999 7999999999999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
+..... ..+.+.+|...|++++|+|.++ ++++|+.|++|+|||+++ ..++..+ .+|...|++++|++++++|
T Consensus 232 ~~~~~~---~~~~l~gH~~~v~~~~f~p~g~-~i~Sgs~D~tvriWd~~~---~~~~~~l-~~hs~~is~~~f~~d~~~l 303 (456)
T KOG0266|consen 232 LKDDGR---NLKTLKGHSTYVTSVAFSPDGN-LLVSGSDDGTVRIWDVRT---GECVRKL-KGHSDGISGLAFSPDGNLL 303 (456)
T ss_pred ccCCCe---EEEEecCCCCceEEEEecCCCC-EEEEecCCCcEEEEeccC---CeEEEee-eccCCceEEEEECCCCCEE
Confidence 954432 5788999999999999999995 899999999999999994 5666777 8999999999999999999
Q ss_pred EEEeCCCcEEEEecCCCCCCC--ceEEcccCCCC--EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGS--SVATFKHHTAP--VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~--~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
++++.||.|+|||+.+ +. ++..+..+... +++++|+|++ .+|++++.|+.+++||+......
T Consensus 304 ~s~s~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~fsp~~-~~ll~~~~d~~~~~w~l~~~~~~---------- 369 (456)
T KOG0266|consen 304 VSASYDGTIRVWDLET---GSKLCLKLLSGAENSAPVTSVQFSPNG-KYLLSASLDRTLKLWDLRSGKSV---------- 369 (456)
T ss_pred EEcCCCccEEEEECCC---CceeeeecccCCCCCCceeEEEECCCC-cEEEEecCCCeEEEEEccCCcce----------
Confidence 9999999999999984 44 45666666555 9999999997 69999999999999999877321
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
....+ +. . +
T Consensus 370 -------~~~~~---------~~--------------------------------------------~--~--------- 378 (456)
T KOG0266|consen 370 -------GTYTG---------HS--------------------------------------------N--L--------- 378 (456)
T ss_pred -------eeecc---------cC--------------------------------------------C--c---------
Confidence 00000 00 0 0
Q ss_pred ceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEe
Q psy4510 538 FNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWD 617 (812)
Q Consensus 538 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd 617 (812)
...+.+...++.+++++++ +.|+.|++|+
T Consensus 379 -------------------------------------------------~~~~~~~~~~~~~~~i~sg--~~d~~v~~~~ 407 (456)
T KOG0266|consen 379 -------------------------------------------------VRCIFSPTLSTGGKLIYSG--SEDGSVYVWD 407 (456)
T ss_pred -------------------------------------------------ceeEecccccCCCCeEEEE--eCCceEEEEe
Confidence 0022233346788889998 8999999999
Q ss_pred ccccccccCCcccccccccccCCCCCCCCCCeeeecCC-CCceEEEEeCCCCCCeEEecC--CCceEEEEecC
Q psy4510 618 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPR 687 (812)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh-~~~V~~l~~sp~~~~~las~s--~Dg~v~iWd~~ 687 (812)
+.+.. .+..+.+| ...+..++++| ...++++++ .|+.+++|...
T Consensus 408 ~~s~~-------------------------~~~~l~~h~~~~~~~~~~~~-~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 408 SSSGG-------------------------ILQRLEGHSKAAVSDLSSHP-TENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred CCccc-------------------------hhhhhcCCCCCceeccccCC-CcCeeeecCcCCCceEEEecCC
Confidence 99875 67788999 88999999999 788999998 78899999753
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-30 Score=300.75 Aligned_cols=333 Identities=15% Similarity=0.188 Sum_probs=245.5
Q ss_pred CCcEEEEccCCCCcccc-cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCC-CCCCCceEEcCCCCcE
Q psy4510 198 KRNIHIWTPREAGAWQV-DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPG-IPTPPLFSFSGHLTEG 275 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~-~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~~h~~~v 275 (812)
+|.+++|+......... ....+..|.+.|.+++|+|++++|++|+.|+.|+||+........ ....+...+.+ ...+
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELAS-RSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecc-cCce
Confidence 56788888775442111 123456799999999999999999999999999999976421000 01123344444 4679
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
.+++|+|....+|++++.||+|++||+.++. ....+.+|.+.|++++|+|....+|++|+.||+|++||+++ .
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~----~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~---~ 608 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQ----LVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ---G 608 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCCe----EEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC---C
Confidence 9999998755899999999999999998876 56678899999999999985444799999999999999984 3
Q ss_pred cceeecCCcCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 356 SCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
.++..+ . +...|.++.|+ +++.+|++|+.||.|++||++. ...++..+.+|...|.++.|.+ + .+|++++.|+
T Consensus 609 ~~~~~~-~-~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~--~~~~~~~~~~h~~~V~~v~f~~-~-~~lvs~s~D~ 682 (793)
T PLN00181 609 VSIGTI-K-TKANICCVQFPSESGRSLAFGSADHKVYYYDLRN--PKLPLCTMIGHSKTVSYVRFVD-S-STLVSSSTDN 682 (793)
T ss_pred cEEEEE-e-cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCC--CCccceEecCCCCCEEEEEEeC-C-CEEEEEECCC
Confidence 345555 3 33679999995 4688999999999999999985 3346778889999999999974 3 5899999999
Q ss_pred CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCC
Q psy4510 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQ 514 (812)
Q Consensus 435 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (812)
+|++||+...... . .
T Consensus 683 ~ikiWd~~~~~~~---------------------------------~----------~---------------------- 697 (793)
T PLN00181 683 TLKLWDLSMSISG---------------------------------I----------N---------------------- 697 (793)
T ss_pred EEEEEeCCCCccc---------------------------------c----------C----------------------
Confidence 9999998643100 0 0
Q ss_pred CCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEE
Q psy4510 515 KEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVR 594 (812)
Q Consensus 515 ~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 594 (812)
......+.+|...+..++
T Consensus 698 --------------------------------------------------------------~~~l~~~~gh~~~i~~v~ 715 (793)
T PLN00181 698 --------------------------------------------------------------ETPLHSFMGHTNVKNFVG 715 (793)
T ss_pred --------------------------------------------------------------CcceEEEcCCCCCeeEEE
Confidence 000123445666788899
Q ss_pred EeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEe
Q psy4510 595 TCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 674 (812)
Q Consensus 595 ~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las 674 (812)
|++++.++++| +.|+.|++|+.........- . . ... ....-.....|...|.+++|+| ++.+|++
T Consensus 716 ~s~~~~~lasg--s~D~~v~iw~~~~~~~~~s~--~---~--~~~-----~~~~~~~~~~~~~~V~~v~ws~-~~~~lva 780 (793)
T PLN00181 716 LSVSDGYIATG--SETNEVFVYHKAFPMPVLSY--K---F--KTI-----DPVSGLEVDDASQFISSVCWRG-QSSTLVA 780 (793)
T ss_pred EcCCCCEEEEE--eCCCEEEEEECCCCCceEEE--e---c--ccC-----CcccccccCCCCcEEEEEEEcC-CCCeEEE
Confidence 99999999998 89999999998654311000 0 0 000 0000112345667899999999 7889999
Q ss_pred cCCCceEEEEec
Q psy4510 675 GDCKRNIHIWTP 686 (812)
Q Consensus 675 ~s~Dg~v~iWd~ 686 (812)
|+.||+|+||++
T Consensus 781 ~~~dG~I~i~~~ 792 (793)
T PLN00181 781 ANSTGNIKILEM 792 (793)
T ss_pred ecCCCcEEEEec
Confidence 999999999986
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-30 Score=258.92 Aligned_cols=483 Identities=11% Similarity=0.117 Sum_probs=315.1
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKG 257 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~ 257 (812)
..++-.|..|....-+|. .|.+||+.... ....+..|..+++|+|||++|+++++|. ....++||++...
T Consensus 41 ~gLa~~p~Sgl~aYpAGC--vVVlfn~~~~t----Q~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h-- 112 (1080)
T KOG1408|consen 41 NGLASVPCSGLCAYPAGC--VVVLFNVDSCT----QSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFH-- 112 (1080)
T ss_pred CcccccccccceeeccCc--EEEEEcccccc----hhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccc--
Confidence 456666733333334443 68999988765 4556778888999999999999999987 6677999999984
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
..+..|..|+-.+.|++|+|.+ .++++.+. |-.|.+||.+.... ..-..-...|..++|+.++.+ +
T Consensus 113 -----~vVAEfvdHKY~vtcvaFsp~~-kyvvSVGsQHDMIVnv~dWr~N~~-----~asnkiss~Vsav~fsEdgSY-f 180 (1080)
T KOG1408|consen 113 -----GVVAEFVDHKYNVTCVAFSPGN-KYVVSVGSQHDMIVNVNDWRVNSS-----GASNKISSVVSAVAFSEDGSY-F 180 (1080)
T ss_pred -----cchhhhhhccccceeeeecCCC-cEEEeeccccceEEEhhhhhhccc-----ccccccceeEEEEEEccCCce-e
Confidence 5677888999999999999998 67776655 55678888776531 111223567999999999994 7
Q ss_pred EEEECCCeEEEEECCCCCcccceeec---------------------------------CCcC-----------------
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTL---------------------------------PNAH----------------- 365 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------------~~~~----------------- 365 (812)
++.+ ...|++|.+......+....+ ..+|
T Consensus 181 vT~g-nrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcR 259 (1080)
T KOG1408|consen 181 VTSG-NRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCR 259 (1080)
T ss_pred eeee-eeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhh
Confidence 7665 489999988743311100000 0111
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC-----------------ceEEccc----CCCCEEEEEEccCCC
Q psy4510 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS-----------------SVATFKH----HTAPVTTVEWHPTES 424 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-----------------~~~~~~~----h~~~v~~v~~~p~~~ 424 (812)
....+||+.+ .++|++|+.+|.|++|+..++.-.. +-..+.. --....++.|.|..
T Consensus 260 TTnAnCIcVs--~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~- 336 (1080)
T KOG1408|consen 260 TTNANCICVS--SRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETT- 336 (1080)
T ss_pred ccccceeeee--cceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCC-
Confidence 1223455544 5699999999999999986432100 0000000 01123567899886
Q ss_pred cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC----------CCCEEEEEeCCCe
Q psy4510 425 STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ----------LPGTIISTANSGF 494 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----------~~~~~~~~~~~~~ 494 (812)
..|.+.-.|..+++||++..+.. ..+.....+...|.++.--|- .+..+++++.|+.
T Consensus 337 ~klscVYndhSlYvWDvrD~~kv-------------gk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~T 403 (1080)
T KOG1408|consen 337 DKLSCVYNDHSLYVWDVRDVNKV-------------GKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGT 403 (1080)
T ss_pred ceEEEEEcCceEEEEeccccccc-------------cceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCc
Confidence 57888888999999999876431 123333333344555544331 2357888887775
Q ss_pred -EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccc
Q psy4510 495 -NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDR 573 (812)
Q Consensus 495 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 573 (812)
++|........+......-......+.+..+. .. .+.... ..+.+
T Consensus 404 IRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~-~q-------------~~~d~~---------~~~fd----------- 449 (1080)
T KOG1408|consen 404 IRLWDLAFCTNNQVYRRNILSANLSKIPYEDST-QQ-------------IMHDAS---------AGIFD----------- 449 (1080)
T ss_pred EEEeecccccccceeecccchhhhhcCccccCc-hh-------------hhhhcc---------CCccc-----------
Confidence 55543332111111000000000000000000 00 000000 00000
Q ss_pred cCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec
Q psy4510 574 RKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS 653 (812)
Q Consensus 574 ~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (812)
............+.++++||+|++|++| ..-|.++||+++... .+..+.
T Consensus 450 ----ka~~s~~d~r~G~R~~~vSp~gqhLAsG--Dr~GnlrVy~Lq~l~-------------------------~~~~~e 498 (1080)
T KOG1408|consen 450 ----KALVSTCDSRFGFRALAVSPDGQHLASG--DRGGNLRVYDLQELE-------------------------YTCFME 498 (1080)
T ss_pred ----ccchhhcCcccceEEEEECCCcceeccc--CccCceEEEEehhhh-------------------------hhhhee
Confidence 0011223344589999999999999999 889999999999876 566788
Q ss_pred CCCCceEEEEeCC--CCCCeEEecCCCceEEEEecCC-----------------------Cc---ee-------------
Q psy4510 654 GHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPRE-----------------------AG---AW------------- 692 (812)
Q Consensus 654 gh~~~V~~l~~sp--~~~~~las~s~Dg~v~iWd~~~-----------------------~~---~~------------- 692 (812)
+|..+|.++.||. ...++||+|+.|..|.|+|+.. |. .+
T Consensus 499 AHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~ 578 (1080)
T KOG1408|consen 499 AHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVN 578 (1080)
T ss_pred cccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehh
Confidence 9999999999984 2346899999999999999864 00 00
Q ss_pred -------------------EE--EEecCCCCEEEeecCCCeEEEeecCCCCCccccccccc---CCCcceeEeEEecCCc
Q psy4510 693 -------------------SV--YLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV---GHTNSVEDLQWSPGEK 748 (812)
Q Consensus 693 -------------------~~--~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~---gH~~~V~~l~fs~dg~ 748 (812)
++ +...|..+++++++.|+.|+||++.+++. .+.|+ +|.+..-.|..-|.|-
T Consensus 579 qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq----~k~FKgs~~~eG~lIKv~lDPSgi 654 (1080)
T KOG1408|consen 579 QKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQ----VKSFKGSRDHEGDLIKVILDPSGI 654 (1080)
T ss_pred ccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccce----eeeecccccCCCceEEEEECCCcc
Confidence 01 13557778999999999999999999984 55564 4666777888999999
Q ss_pred eeEEeeccCCceEEeeecCcc
Q psy4510 749 RVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 749 ~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
|||+...|+++.++|+-+++
T Consensus 655 -Y~atScsdktl~~~Df~sgE 674 (1080)
T KOG1408|consen 655 -YLATSCSDKTLCFVDFVSGE 674 (1080)
T ss_pred -EEEEeecCCceEEEEeccch
Confidence 89999999999999998886
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=251.77 Aligned_cols=295 Identities=23% Similarity=0.374 Sum_probs=239.6
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC---CcEEEeeCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK---TALQTVDDP 244 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~---~~l~s~~~d 244 (812)
...-+ -|.+-|.++.- .++.|.||++||.++|||.... ...++.||.++|.+++|--.. ..+++++.|
T Consensus 98 pl~~~-~hdDWVSsv~~---~~~~IltgsYDg~~riWd~~Gk-----~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~D 168 (423)
T KOG0313|consen 98 PLQCF-LHDDWVSSVKG---ASKWILTGSYDGTSRIWDLKGK-----SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMD 168 (423)
T ss_pred ccccc-cchhhhhhhcc---cCceEEEeecCCeeEEEecCCc-----eEEEEecCCcceeeeEEEecCCccceEEEecCC
Confidence 34444 67788888875 3689999999999999998765 678899999999998885443 359999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC------------------
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG------------------ 306 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~------------------ 306 (812)
.++++|..+.+.. ..+.+...+||...|.+++..+++ .++++|+.|.+|.||+.....
T Consensus 169 qtl~Lw~~~~~~~---~~~~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~ 244 (423)
T KOG0313|consen 169 QTLRLWKWNVGEN---KVKALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKRE 244 (423)
T ss_pred ceEEEEEecCchh---hhhHHhHhcccccceeEEEecCCC-CeEEeecccceeeecccCCCccccccccchhhhhhhhhh
Confidence 9999999887621 123444456999999999999999 899999999999999932110
Q ss_pred ---cceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 307 ---AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 307 ---~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
....+...+.||..+|.++.|++.+ .+.+++.|.+|+.||+.++. +..++ .....++|++.+|..++|++
T Consensus 245 ~~~~~r~P~vtl~GHt~~Vs~V~w~d~~--v~yS~SwDHTIk~WDletg~---~~~~~--~~~ksl~~i~~~~~~~Ll~~ 317 (423)
T KOG0313|consen 245 KEGGTRTPLVTLEGHTEPVSSVVWSDAT--VIYSVSWDHTIKVWDLETGG---LKSTL--TTNKSLNCISYSPLSKLLAS 317 (423)
T ss_pred hcccccCceEEecccccceeeEEEcCCC--ceEeecccceEEEEEeeccc---ceeee--ecCcceeEeecccccceeee
Confidence 0122455678999999999999944 69999999999999999543 33333 34678999999999999999
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
|+.|..|++||.|........++|.+|+..|.++.|+|.+..+|++++.|+++++||++..+. ++
T Consensus 318 gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~---------------pl 382 (423)
T KOG0313|consen 318 GSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA---------------PL 382 (423)
T ss_pred cCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC---------------cc
Confidence 999999999999987666677899999999999999999999999999999999999998853 56
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEe
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRT 499 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~ 499 (812)
...+.+...|.++.|+.. ..+++++.|. +.+|..
T Consensus 383 ydI~~h~DKvl~vdW~~~--~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 383 YDIAGHNDKVLSVDWNEG--GLIVSGGADNKLRIFKG 417 (423)
T ss_pred eeeccCCceEEEEeccCC--ceEEeccCcceEEEecc
Confidence 666676778999999986 5666666554 566543
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-30 Score=266.20 Aligned_cols=286 Identities=25% Similarity=0.439 Sum_probs=237.5
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
..+++|.++|.+++|+| ++++|++++.+|.|++|++.+.. ....+..|...+..+.|++++++|++++.++.+++
T Consensus 3 ~~~~~h~~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 3 RTLKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGE----LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred hHhcccCCCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCC----cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 44568999999999999 99999999999999999998776 55667889999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|++..+ +.+..+..|...+.++.|+|++ .++++++.+|.|++|++.+.. ....+..|...|.+++|+|
T Consensus 78 ~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 78 WDLETG-------ECVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGK----CLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred EEcCcc-------cceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcE----EEEEeccCCCcEEEEEEcC
Confidence 999874 6777888999999999999996 788888889999999998765 4555668899999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
++. ++++++.+|.|++||++.. ..+..+ ..|...+.+++|+|+++.+++++.+|.|++||++ ....+..+..
T Consensus 146 ~~~-~l~~~~~~~~i~i~d~~~~---~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~---~~~~~~~~~~ 217 (289)
T cd00200 146 DGT-FVASSSQDGTIKLWDLRTG---KCVATL-TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS---TGKCLGTLRG 217 (289)
T ss_pred cCC-EEEEEcCCCcEEEEEcccc---ccceeE-ecCccccceEEECCCcCEEEEecCCCcEEEEECC---CCceecchhh
Confidence 976 6777777999999999843 334444 5788899999999999999999999999999998 4667777878
Q ss_pred CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 410 h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
|...+.++.|+|++ .++++++.++.|++||+...+. ......+...|..+.|+|++..+++++
T Consensus 218 ~~~~i~~~~~~~~~-~~~~~~~~~~~i~i~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~l~~~~ 280 (289)
T cd00200 218 HENGVNSVAFSPDG-YLLASGSEDGTIRVWDLRTGEC----------------VQTLSGHTNSVTSLAWSPDGKRLASGS 280 (289)
T ss_pred cCCceEEEEEcCCC-cEEEEEcCCCcEEEEEcCCcee----------------EEEccccCCcEEEEEECCCCCEEEEec
Confidence 99999999999984 6888888899999999986531 122223445799999999875444444
Q ss_pred eCCCeEEE
Q psy4510 490 ANSGFNIF 497 (812)
Q Consensus 490 ~~~~~~~~ 497 (812)
.++.+.+|
T Consensus 281 ~d~~i~iw 288 (289)
T cd00200 281 ADGTIRIW 288 (289)
T ss_pred CCCeEEec
Confidence 44445554
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=240.71 Aligned_cols=255 Identities=20% Similarity=0.383 Sum_probs=224.3
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCC
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPF 245 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~ 245 (812)
+...++ .-.+.++.++||+...+.+++++.||+++|||+..... ++..++.|+..|.++.|++.. +.+++++-|+
T Consensus 52 ~e~~s~-d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~---Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~ 127 (311)
T KOG0277|consen 52 QECQSY-DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSK---PIHKFKEHKREVYSVDWNTVRRRIFLTSSWDG 127 (311)
T ss_pred EEEEee-ecccceeEeeecCCCcceEEEEecCceEEEeccCCCCc---chhHHHhhhhheEEeccccccceeEEeeccCC
Confidence 344555 56688999999997778999999999999999665543 778899999999999999865 4567789999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
+|++|+...+ ..+.+++||...|+..+|+|..++++++++.|+++++||++..++ ...+..|...|.++
T Consensus 128 TiKLW~~~r~-------~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk----~~~i~ah~~Eil~c 196 (311)
T KOG0277|consen 128 TIKLWDPNRP-------NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK----FMSIEAHNSEILCC 196 (311)
T ss_pred ceEeecCCCC-------cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCc----eeEEEeccceeEee
Confidence 9999999874 788999999999999999999989999999999999999998873 34477899999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
.|+....+++++|+.|+.||+||+|... .++..+ .+|.-.|..+.|+|... +|++++.|-+++|||... ....+
T Consensus 197 dw~ky~~~vl~Tg~vd~~vr~wDir~~r--~pl~eL-~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~--~ds~~ 271 (311)
T KOG0277|consen 197 DWSKYNHNVLATGGVDNLVRGWDIRNLR--TPLFEL-NGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPER--QDSAI 271 (311)
T ss_pred cccccCCcEEEecCCCceEEEEehhhcc--ccceee-cCCceEEEEEecCcchhhHhhhccccceEEeccccc--chhhh
Confidence 9999999999999999999999999644 446666 89999999999999875 999999999999999975 44567
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.+...|+.-|..+.|++..+.++|+++.|..+.||+-
T Consensus 272 e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 272 ETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 7778899999999999998899999999999999984
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-30 Score=297.13 Aligned_cols=254 Identities=17% Similarity=0.265 Sum_probs=206.5
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC----cccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCc
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG----AWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQ 246 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~----~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~ 246 (812)
+.+|.+.|.+++|+| ++++||||+.|+.|+||++.... ........+. +...|.+++|++. +.+|++++.|+.
T Consensus 479 ~~~~~~~V~~i~fs~-dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 479 LLNSSNLVCAIGFDR-DGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred ccCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 336899999999999 99999999999999999976421 1111112222 3568999999874 789999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +.+..+.+|.+.|++++|+|....+|++|+.||+|++||+.++. ....+.. ...|.++.
T Consensus 557 v~lWd~~~~-------~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~----~~~~~~~-~~~v~~v~ 624 (793)
T PLN00181 557 VQVWDVARS-------QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV----SIGTIKT-KANICCVQ 624 (793)
T ss_pred EEEEECCCC-------eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc----EEEEEec-CCCeEEEE
Confidence 999999874 67788999999999999998544899999999999999998776 3344443 36799999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC---CCCc
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK---KGSS 403 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~---~~~~ 403 (812)
|++....+|++|+.||.|++||++... ..+..+ .+|...|.++.|. ++.+|++++.|+.|++||++... ...+
T Consensus 625 ~~~~~g~~latgs~dg~I~iwD~~~~~--~~~~~~-~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~ 700 (793)
T PLN00181 625 FPSESGRSLAFGSADHKVYYYDLRNPK--LPLCTM-IGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETP 700 (793)
T ss_pred EeCCCCCEEEEEeCCCeEEEEECCCCC--ccceEe-cCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcc
Confidence 965444479999999999999998532 123444 6899999999997 67799999999999999997421 1356
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+..+.+|...+..+.|+|++ .+|++|+.|+.|++|+....
T Consensus 701 l~~~~gh~~~i~~v~~s~~~-~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 701 LHSFMGHTNVKNFVGLSVSD-GYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred eEEEcCCCCCeeEEEEcCCC-CEEEEEeCCCEEEEEECCCC
Confidence 88899999999999999987 69999999999999997654
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-31 Score=256.99 Aligned_cols=294 Identities=16% Similarity=0.220 Sum_probs=237.8
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccc-------------cccc-CCCCCCeeeeeEcCCCCc
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-------------QKPL-GGHTNSAEDLQWSDLKTA 237 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~-------------~~~l-~~h~~~V~~l~~s~~~~~ 237 (812)
...|.-+|+|++++| +..++.+++.+|+|.=|++.++...... .+.- .+|...|.+++.|+||++
T Consensus 138 ~~~H~~s~~~vals~-d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky 216 (479)
T KOG0299|consen 138 IGKHQLSVTSVALSP-DDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY 216 (479)
T ss_pred eccccCcceEEEeec-cccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence 337889999999999 9999999999999999999887642101 1111 378899999999999999
Q ss_pred EEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 238 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 238 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
|++|+.|..|.||+..+. .++..+++|.+.|.+++|-... ..|++++.|++|++|++.... ...++.+
T Consensus 217 latgg~d~~v~Iw~~~t~-------ehv~~~~ghr~~V~~L~fr~gt-~~lys~s~Drsvkvw~~~~~s----~vetlyG 284 (479)
T KOG0299|consen 217 LATGGRDRHVQIWDCDTL-------EHVKVFKGHRGAVSSLAFRKGT-SELYSASADRSVKVWSIDQLS----YVETLYG 284 (479)
T ss_pred EEecCCCceEEEecCccc-------chhhcccccccceeeeeeecCc-cceeeeecCCceEEEehhHhH----HHHHHhC
Confidence 999999999999999985 8889999999999999998765 789999999999999999887 6788999
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
|.+.|.+|.-..-++ ++.+|+.|+++++|++.. .. ...+ .+|.+.+.|++|-.+ ..|++|+.+|.|.+|++-+
T Consensus 285 Hqd~v~~IdaL~reR-~vtVGgrDrT~rlwKi~e--es--qlif-rg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 285 HQDGVLGIDALSRER-CVTVGGRDRTVRLWKIPE--ES--QLIF-RGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLK 357 (479)
T ss_pred Cccceeeechhcccc-eEEeccccceeEEEeccc--cc--eeee-eCCCCCeeeEEEecc-cceeeccCCceEEEeeecc
Confidence 999999999988887 566777999999999952 11 2233 688889999999854 4899999999999999984
Q ss_pred CCCCCceEEcc-cC-----------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEE
Q psy4510 398 FKKGSSVATFK-HH-----------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF 465 (812)
Q Consensus 398 ~~~~~~~~~~~-~h-----------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (812)
.+++.+.+ .| ...|++++..|. +.++++|+.+|.|++|-+..+-. +..+++
T Consensus 358 ---Kkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~-sdL~asGS~~G~vrLW~i~~g~r-------------~i~~l~ 420 (479)
T KOG0299|consen 358 ---KKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPG-SDLLASGSWSGCVRLWKIEDGLR-------------AINLLY 420 (479)
T ss_pred ---cCceeEeeccccccCCccccccccceeeeEeccc-CceEEecCCCCceEEEEecCCcc-------------ccceee
Confidence 55555443 12 237999999996 57999999999999999987732 114444
Q ss_pred eecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCC
Q psy4510 466 IHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISD 502 (812)
Q Consensus 466 ~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~ 502 (812)
...-.+-|++++|++++..++++.+... +-.|+....
T Consensus 421 ~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k~ 458 (479)
T KOG0299|consen 421 SLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLKS 458 (479)
T ss_pred ecccccEEEEEEEccCCCEEEEecccccccceeeEeec
Confidence 4445567999999999987887776543 455655443
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=251.86 Aligned_cols=282 Identities=19% Similarity=0.285 Sum_probs=240.2
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
..+.|.+++|||+.+.-+|+.+. -.|.||+..+.. ..+++......|+++.|..||++|++|+..|.|+|+|+++
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~----~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRS----VRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred ccCcceeEecCCCCCCceEEecc-cEEEEEecchhh----hhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 45889999999988887777764 479999988776 6677888899999999999999999999999999999665
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
. ..+..+.+|+.++..+.|+|++..+|++|+.|+.+++||+.+.. .+..+.+|++.|.|.+|+|...++
T Consensus 100 r-------~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~----v~~~l~~htDYVR~g~~~~~~~hi 168 (487)
T KOG0310|consen 100 R-------VILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY----VQAELSGHTDYVRCGDISPANDHI 168 (487)
T ss_pred H-------HHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE----EEEEecCCcceeEeeccccCCCeE
Confidence 2 56788999999999999999998889999999999999999876 466889999999999999999999
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCE
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV 414 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 414 (812)
++|||.||.||+||+|... ..+..+ .|..+|.++.+-|.|.+|++++. ..|+|||+.. .++.+..+..|...|
T Consensus 169 vvtGsYDg~vrl~DtR~~~--~~v~el--nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~--G~qll~~~~~H~KtV 241 (487)
T KOG0310|consen 169 VVTGSYDGKVRLWDTRSLT--SRVVEL--NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTT--GGQLLTSMFNHNKTV 241 (487)
T ss_pred EEecCCCceEEEEEeccCC--ceeEEe--cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecC--CceehhhhhcccceE
Confidence 9999999999999999643 345555 78999999999999999999875 4799999975 455666666699999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
||+.+..++ +.|++++-|+.|++||+... .+.....-.++|.+++.+|++. .++.+..+|+
T Consensus 242 TcL~l~s~~-~rLlS~sLD~~VKVfd~t~~-----------------Kvv~s~~~~~pvLsiavs~dd~-t~viGmsnGl 302 (487)
T KOG0310|consen 242 TCLRLASDS-TRLLSGSLDRHVKVFDTTNY-----------------KVVHSWKYPGPVLSIAVSPDDQ-TVVIGMSNGL 302 (487)
T ss_pred EEEEeecCC-ceEeecccccceEEEEccce-----------------EEEEeeecccceeeEEecCCCc-eEEEecccce
Confidence 999999976 79999999999999998776 5666666678999999999875 4445555554
Q ss_pred EEEE
Q psy4510 495 NIFR 498 (812)
Q Consensus 495 ~~~~ 498 (812)
....
T Consensus 303 v~~r 306 (487)
T KOG0310|consen 303 VSIR 306 (487)
T ss_pred eeee
Confidence 4443
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=231.23 Aligned_cols=308 Identities=18% Similarity=0.270 Sum_probs=243.7
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
..+.||+.+++.+.++.+|.+|.+++.|.+..||-..+| ..+-++.||++.|++++..-+. ..+++|+.|.+
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nG-------erlGty~GHtGavW~~Did~~s-~~liTGSAD~t 75 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNG-------ERLGTYDGHTGAVWCCDIDWDS-KHLITGSADQT 75 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCC-------ceeeeecCCCceEEEEEecCCc-ceeeeccccce
Confidence 457899999999999999999999999999999998776 8899999999999999999887 89999999999
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE----ECCCeEEEEECCCCC----cccceeecCCcCCCC
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC----SVDLSIRIWDTRVIN----TKSCMLTLPNAHTSD 368 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~----~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~ 368 (812)
+++||+.+++ ....+. ...+|..+.|+++|+.++++. +..+.|.++|++... ...+...+ ..+.+.
T Consensus 76 ~kLWDv~tGk----~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI-~t~~sk 149 (327)
T KOG0643|consen 76 AKLWDVETGK----QLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI-PTPDSK 149 (327)
T ss_pred eEEEEcCCCc----EEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe-cCCccc
Confidence 9999999997 333333 567899999999998433332 234689999998543 34456666 567789
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
++++-|.|-+++|++|..||.|.+||+++ ..+.+..-+.|...|+.++++|+. .++++++.|.+-++||+.+.
T Consensus 150 it~a~Wg~l~~~ii~Ghe~G~is~~da~~--g~~~v~s~~~h~~~Ind~q~s~d~-T~FiT~s~Dttakl~D~~tl---- 222 (327)
T KOG0643|consen 150 ITSALWGPLGETIIAGHEDGSISIYDART--GKELVDSDEEHSSKINDLQFSRDR-TYFITGSKDTTAKLVDVRTL---- 222 (327)
T ss_pred eeeeeecccCCEEEEecCCCcEEEEEccc--CceeeechhhhccccccccccCCc-ceEEecccCccceeeeccce----
Confidence 99999999999999999999999999995 345667778899999999999996 79999999999999999988
Q ss_pred HHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCC
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG 528 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 528 (812)
+++.......+|++.+++|....+++.++.+..-+--+.... +
T Consensus 223 -------------~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~------------------------G 265 (327)
T KOG0643|consen 223 -------------EVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRA------------------------G 265 (327)
T ss_pred -------------eeEEEeeecccccceecccccceEEecCCceeeeeeeecccc------------------------c
Confidence 677777777899999999987767766665442221110000 0
Q ss_pred eEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec
Q psy4510 529 TIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG 608 (812)
Q Consensus 529 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~ 608 (812)
.+- .++..+.. ..-.....+|-++|++++|+|+|+..++| +
T Consensus 266 KFE------------ArFyh~i~-------------------------eEEigrvkGHFGPINsvAfhPdGksYsSG--G 306 (327)
T KOG0643|consen 266 KFE------------ARFYHLIF-------------------------EEEIGRVKGHFGPINSVAFHPDGKSYSSG--G 306 (327)
T ss_pred chh------------hhHHHHHH-------------------------HHHhccccccccCcceeEECCCCcccccC--C
Confidence 000 00000000 00133578999999999999999999998 9
Q ss_pred CcceEEEEecccc
Q psy4510 609 EVGKVGIWDLKTA 621 (812)
Q Consensus 609 ~dg~I~iwd~~~~ 621 (812)
+||.|++.-+...
T Consensus 307 EDG~VR~h~Fd~~ 319 (327)
T KOG0643|consen 307 EDGYVRLHHFDSN 319 (327)
T ss_pred CCceEEEEEeccc
Confidence 9999999877654
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=224.35 Aligned_cols=281 Identities=20% Similarity=0.278 Sum_probs=230.3
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+..|.++|.++.|+-+|+|.++++.|.++++|+...+ ..++++.+|..+|..++.+.++ ..+++|+.|
T Consensus 9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg-------~liktYsghG~EVlD~~~s~Dn-skf~s~GgD 80 (307)
T KOG0316|consen 9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG-------ALIKTYSGHGHEVLDAALSSDN-SKFASCGGD 80 (307)
T ss_pred hceeecccccceEEEEEccCCCEEEEcCCCceEEeeccccc-------ceeeeecCCCceeeeccccccc-cccccCCCC
Confidence 45677899999999999999999999999999999999886 8999999999999999999998 799999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|.+||+.+++ ..+.+.+|.+.|+.++|+.+.. ++++|+.|.++++||.|... ..++..+ ......|.++..
T Consensus 81 k~v~vwDV~TGk----v~Rr~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s-~ePiQil-dea~D~V~Si~v 153 (307)
T KOG0316|consen 81 KAVQVWDVNTGK----VDRRFRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRS-FEPIQIL-DEAKDGVSSIDV 153 (307)
T ss_pred ceEEEEEcccCe----eeeecccccceeeEEEecCcce-EEEeccccceeEEEEcccCC-CCccchh-hhhcCceeEEEe
Confidence 999999999998 7899999999999999998887 89999999999999999753 3455555 566778999887
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+ +..|++|+.||+++.||+| .++.....- ..+|++++|++++ +..++++.|+++++.|-.+++.
T Consensus 154 ~--~heIvaGS~DGtvRtydiR---~G~l~sDy~--g~pit~vs~s~d~-nc~La~~l~stlrLlDk~tGkl-------- 217 (307)
T KOG0316|consen 154 A--EHEIVAGSVDGTVRTYDIR---KGTLSSDYF--GHPITSVSFSKDG-NCSLASSLDSTLRLLDKETGKL-------- 217 (307)
T ss_pred c--ccEEEeeccCCcEEEEEee---cceeehhhc--CCcceeEEecCCC-CEEEEeeccceeeecccchhHH--------
Confidence 6 5579999999999999999 454444443 5699999999997 6888999999999999988843
Q ss_pred hhccCCCceEEeecCCC---ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 455 ELKDLPSQLLFIHLGQK---EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
+....++. --...+++... ..+++++.+|...||..-.......+.....-.+.++.++|..+.+++
T Consensus 218 ---------L~sYkGhkn~eykldc~l~qsd-thV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~ 287 (307)
T KOG0316|consen 218 ---------LKSYKGHKNMEYKLDCCLNQSD-THVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFIT 287 (307)
T ss_pred ---------HHHhcccccceeeeeeeecccc-eeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeE
Confidence 22222222 22334444443 578899999988888776655544444444456899999999887777
Q ss_pred EeeCC
Q psy4510 532 STANS 536 (812)
Q Consensus 532 ~~~~~ 536 (812)
|.+..
T Consensus 288 A~~~~ 292 (307)
T KOG0316|consen 288 ATGHG 292 (307)
T ss_pred ecCCc
Confidence 77654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=240.64 Aligned_cols=264 Identities=22% Similarity=0.377 Sum_probs=224.7
Q ss_pred CCCccCcCCCCCceEEEEeCCCCC--CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~--~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
.+.+....||.++|..++|.-.+. ..+++|+.|.++++|..+.++......+...||+..|-++...++|..+++|+.
T Consensus 134 Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~ 213 (423)
T KOG0313|consen 134 GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSW 213 (423)
T ss_pred CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecc
Confidence 456667779999999888864122 369999999999999999887766566677799999999999999999999999
Q ss_pred CCceEEeeCCCCC------------------CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC
Q psy4510 244 PFQLAEHNKKRGK------------------GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305 (812)
Q Consensus 244 d~~i~vwd~~~~~------------------~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~ 305 (812)
|.+|.||+..... .......|+.++.||...|.++.|++. ..+.+++.|.+|+.||+.++
T Consensus 214 D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg 291 (423)
T KOG0313|consen 214 DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETG 291 (423)
T ss_pred cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecc
Confidence 9999999933211 112235788999999999999999994 79999999999999999999
Q ss_pred CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEE
Q psy4510 306 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSG 384 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg 384 (812)
+ ....+. ....++++..+|..+ +|++|+.|..|++||.|++.......++ .+|.+.|.++.|+|... +|++|
T Consensus 292 ~----~~~~~~-~~ksl~~i~~~~~~~-Ll~~gssdr~irl~DPR~~~gs~v~~s~-~gH~nwVssvkwsp~~~~~~~S~ 364 (423)
T KOG0313|consen 292 G----LKSTLT-TNKSLNCISYSPLSK-LLASGSSDRHIRLWDPRTGDGSVVSQSL-IGHKNWVSSVKWSPTNEFQLVSG 364 (423)
T ss_pred c----ceeeee-cCcceeEeecccccc-eeeecCCCCceeecCCCCCCCceeEEee-ecchhhhhheecCCCCceEEEEE
Confidence 8 344444 456899999999877 8999999999999999998766656666 89999999999999886 89999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
+.|+++++||+|. ...++..+.+|...|.++.|+.. ..+++||.|++|+++.-.
T Consensus 365 S~D~t~klWDvRS--~k~plydI~~h~DKvl~vdW~~~--~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 365 SYDNTVKLWDVRS--TKAPLYDIAGHNDKVLSVDWNEG--GLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ecCCeEEEEEecc--CCCcceeeccCCceEEEEeccCC--ceEEeccCcceEEEeccc
Confidence 9999999999996 55699999999999999999964 489999999999998654
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=235.06 Aligned_cols=293 Identities=18% Similarity=0.267 Sum_probs=233.5
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
|..+.+.|..|||+| ++|++|+.||.|.+|+..+++...- ....+--+..+|.|++|+.+.. ++|+|+.||.|+
T Consensus 211 g~KSh~EcA~FSPDg-qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE-MlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDG-QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE-MLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCC-ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHH-HhhccCcCCcEE
Confidence 455678899999999 8999999999999999988762110 1223445788999999999998 799999999999
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 425 (812)
+|.++ ++.|++.+..+|...|+|+.|+.++..+++++.|.+++|--+. .++.++.|++|+..|+...|.++| .
T Consensus 289 vWri~---tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlK---SGK~LKEfrGHsSyvn~a~ft~dG-~ 361 (508)
T KOG0275|consen 289 VWRIE---TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLK---SGKCLKEFRGHSSYVNEATFTDDG-H 361 (508)
T ss_pred EEEEe---cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccc---cchhHHHhcCccccccceEEcCCC-C
Confidence 99999 6779999988999999999999999999999999999999987 689999999999999999999997 6
Q ss_pred EEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy4510 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505 (812)
Q Consensus 426 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (812)
.+++++.||+|++|+..+..+.. .........+|..+..-|..|-.++.+........-...
T Consensus 362 ~iisaSsDgtvkvW~~KtteC~~--------------Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q---- 423 (508)
T KOG0275|consen 362 HIISASSDGTVKVWHGKTTECLS--------------TFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ---- 423 (508)
T ss_pred eEEEecCCccEEEecCcchhhhh--------------hccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc----
Confidence 99999999999999998874321 111111234678888888777666666554432221111
Q ss_pred ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEec
Q psy4510 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR 585 (812)
Q Consensus 506 ~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (812)
+.++.+.+.+ ..
T Consensus 424 ----------------------GQvVrsfsSG----------------------------------------------kR 435 (508)
T KOG0275|consen 424 ----------------------GQVVRSFSSG----------------------------------------------KR 435 (508)
T ss_pred ----------------------ceEEeeeccC----------------------------------------------Cc
Confidence 2222222111 01
Q ss_pred ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeC
Q psy4510 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 665 (812)
Q Consensus 586 h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~s 665 (812)
..+...+.+.||.|.++.+. ++|+.++.+.+.++. +-.++.-|...|..++-+
T Consensus 436 EgGdFi~~~lSpkGewiYci--gED~vlYCF~~~sG~-------------------------LE~tl~VhEkdvIGl~HH 488 (508)
T KOG0275|consen 436 EGGDFINAILSPKGEWIYCI--GEDGVLYCFSVLSGK-------------------------LERTLPVHEKDVIGLTHH 488 (508)
T ss_pred cCCceEEEEecCCCcEEEEE--ccCcEEEEEEeecCc-------------------------eeeeeecccccccccccC
Confidence 12344567789999999988 999999999999987 677788899999999999
Q ss_pred CCCCCeEEecCCCceEEEEe
Q psy4510 666 STEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 666 p~~~~~las~s~Dg~v~iWd 685 (812)
| ..++||+-+.||.+++|.
T Consensus 489 P-HqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 489 P-HQNLLASYSEDGLLKLWK 507 (508)
T ss_pred c-ccchhhhhcccchhhhcC
Confidence 9 788999999999999995
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-29 Score=229.41 Aligned_cols=289 Identities=22% Similarity=0.388 Sum_probs=231.8
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC--------------Ccc-cceeecCCcCCCCeEEEEEcC
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI--------------NTK-SCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------------~~~-~~~~~~~~~~~~~v~~l~~~~ 376 (812)
...+..|.+++.+.+|+|+|. ++|+|+.|.+|+|.|+... +.. ..++++ ..|...|+++.|+|
T Consensus 105 t~ylt~HK~~cR~aafs~DG~-lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTl-YDH~devn~l~FHP 182 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGS-LVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTL-YDHVDEVNDLDFHP 182 (430)
T ss_pred eEEEeecccceeeeeeCCCCc-EEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeeh-hhccCcccceeecc
Confidence 455678999999999999999 8999999999999998610 111 233444 78999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhh
Q psy4510 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL 456 (812)
Q Consensus 377 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 456 (812)
...+|++|+.|++|++||..+....+..+.|+ ...+|.++.|+|.|. +|+.|....++++||+.+.+.
T Consensus 183 re~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGe-fllvgTdHp~~rlYdv~T~Qc---------- 250 (430)
T KOG0640|consen 183 RETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGE-FLLVGTDHPTLRLYDVNTYQC---------- 250 (430)
T ss_pred hhheEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCc-eEEEecCCCceeEEeccceeE----------
Confidence 99999999999999999997533333333443 467899999999984 899999999999999987721
Q ss_pred ccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCC
Q psy4510 457 KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 536 (812)
Q Consensus 457 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~ 536 (812)
++++ +|
T Consensus 251 -----------------------------fvsa---------------------------------nP------------ 256 (430)
T KOG0640|consen 251 -----------------------------FVSA---------------------------------NP------------ 256 (430)
T ss_pred -----------------------------eeec---------------------------------Cc------------
Confidence 1111 01
Q ss_pred CceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEE
Q psy4510 537 GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIW 616 (812)
Q Consensus 537 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iw 616 (812)
-.+|.+.|+++.+++.|+..++| +.||.|+||
T Consensus 257 ----------------------------------------------d~qht~ai~~V~Ys~t~~lYvTa--SkDG~Iklw 288 (430)
T KOG0640|consen 257 ----------------------------------------------DDQHTGAITQVRYSSTGSLYVTA--SKDGAIKLW 288 (430)
T ss_pred ----------------------------------------------ccccccceeEEEecCCccEEEEe--ccCCcEEee
Confidence 23577899999999999999999 999999999
Q ss_pred eccccccccCCcccccccccccCCCCCCCCCCeeee-cCCCC-ceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEE
Q psy4510 617 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF-SGHLT-EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694 (812)
Q Consensus 617 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~~-~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~ 694 (812)
|--+++ |+.++ ++|.+ .|.++.|+. +++++.+.+.|.+|++|.+.+|+.+..
T Consensus 289 DGVS~r-------------------------Cv~t~~~AH~gsevcSa~Ftk-n~kyiLsSG~DS~vkLWEi~t~R~l~~ 342 (430)
T KOG0640|consen 289 DGVSNR-------------------------CVRTIGNAHGGSEVCSAVFTK-NGKYILSSGKDSTVKLWEISTGRMLKE 342 (430)
T ss_pred ccccHH-------------------------HHHHHHhhcCCceeeeEEEcc-CCeEEeecCCcceeeeeeecCCceEEE
Confidence 988876 55555 45664 799999999 899999999999999999999776543
Q ss_pred E---------------EecCCCCEEEeec-CCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCC
Q psy4510 695 Y---------------LYTNRFGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758 (812)
Q Consensus 695 ~---------------~~s~dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg 758 (812)
. .|.....|+..-. ..+.+.-||.+++.+ ...--.||++.+..+.-||.+. .++|||.|.
T Consensus 343 YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr---~~l~slgHn~a~R~i~HSP~~p-~FmTcsdD~ 418 (430)
T KOG0640|consen 343 YTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADR---VALLSLGHNGAVRWIVHSPVEP-AFMTCSDDF 418 (430)
T ss_pred EecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhh---hhhcccCCCCCceEEEeCCCCC-ceeeecccc
Confidence 2 3555566666554 467899999999875 2333479999999999999999 899999999
Q ss_pred ceEEeeec
Q psy4510 759 SNRIGARR 766 (812)
Q Consensus 759 ~i~iWd~~ 766 (812)
.+|+|--+
T Consensus 419 raRFWyrr 426 (430)
T KOG0640|consen 419 RARFWYRR 426 (430)
T ss_pred eeeeeeec
Confidence 99999654
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=225.54 Aligned_cols=288 Identities=18% Similarity=0.275 Sum_probs=232.1
Q ss_pred eEEcCCCCcEEEEEecC---CCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 266 FSFSGHLTEGFAMDWSS---TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 266 ~~~~~h~~~v~~l~~sp---~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.+..||+.+|..|+||| +| .+|++++.||.-.+=+-.++. -+.+|.+|.+.|+..+.+.+.. ..|+++.|-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g-~flisa~kd~~pmlr~g~tgd----wigtfeghkgavw~~~l~~na~-~aasaaadf 81 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDG-YFLISASKDGKPMLRNGDTGD----WIGTFEGHKGAVWSATLNKNAT-RAASAAADF 81 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCc-eEEEEeccCCCchhccCCCCC----cEEeeeccCcceeeeecCchhh-hhhhhcccc
Confidence 56789999999999986 55 789999999998887777776 5778999999999999998877 589999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+-++||.-++ ..+.++ .|..-|.+++|+.+.++|++|+.+..++|||+.. ...+...+.+|.+.|..+.|...
T Consensus 82 takvw~a~tg---delhsf--~hkhivk~~af~~ds~~lltgg~ekllrvfdln~--p~App~E~~ghtg~Ir~v~wc~e 154 (334)
T KOG0278|consen 82 TAKVWDAVTG---DELHSF--EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNR--PKAPPKEISGHTGGIRTVLWCHE 154 (334)
T ss_pred hhhhhhhhhh---hhhhhh--hhhheeeeEEecccchhhhccchHHHhhhhhccC--CCCCchhhcCCCCcceeEEEecc
Confidence 9999998854 345665 6888899999999999999999999999999987 56788899999999999999987
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+ +.|++++.|++||+||.+++.. .........|+++..+++ +.+++.+.++...|+....
T Consensus 155 D-~~iLSSadd~tVRLWD~rTgt~-----------------v~sL~~~s~VtSlEvs~d--G~ilTia~gssV~Fwdaks 214 (334)
T KOG0278|consen 155 D-KCILSSADDKTVRLWDHRTGTE-----------------VQSLEFNSPVTSLEVSQD--GRILTIAYGSSVKFWDAKS 214 (334)
T ss_pred C-ceEEeeccCCceEEEEeccCcE-----------------EEEEecCCCCcceeeccC--CCEEEEecCceeEEecccc
Confidence 5 6888889999999999999843 222333457888888888 4455566655555544322
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
... +..
T Consensus 215 f~~-----------------------------------lKs--------------------------------------- 220 (334)
T KOG0278|consen 215 FGL-----------------------------------LKS--------------------------------------- 220 (334)
T ss_pred ccc-----------------------------------eee---------------------------------------
Confidence 100 000
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeee-ecCCCCceEE
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFA 661 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~ 661 (812)
..-...|.+...+|+...+++| ++|+.++.||..++. .+.. .+||.++|.|
T Consensus 221 -~k~P~nV~SASL~P~k~~fVaG--ged~~~~kfDy~Tge-------------------------Ei~~~nkgh~gpVhc 272 (334)
T KOG0278|consen 221 -YKMPCNVESASLHPKKEFFVAG--GEDFKVYKFDYNTGE-------------------------EIGSYNKGHFGPVHC 272 (334)
T ss_pred -ccCccccccccccCCCceEEec--CcceEEEEEeccCCc-------------------------eeeecccCCCCceEE
Confidence 1112367778888988888888 999999999999987 2333 4899999999
Q ss_pred EEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 662 MDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 662 l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
|.|+| +|.+.|+||.||+||||....+
T Consensus 273 VrFSP-dGE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 273 VRFSP-DGELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred EEECC-CCceeeccCCCceEEEEEecCC
Confidence 99999 8999999999999999997643
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-28 Score=242.32 Aligned_cols=236 Identities=20% Similarity=0.294 Sum_probs=171.0
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
|.+-|--+.....-......+.+|...|+.+.|+|-. .+||+|+.|..++||.+..+....+ ..+-..+.+..-.+.+
T Consensus 55 ~~lgvlPl~~~Gr~~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~L-Sape~~~g~~~~~vE~ 133 (1012)
T KOG1445|consen 55 GKLGVLPLTAKGRRTRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKL-SAPEIDVGGGNVIVEC 133 (1012)
T ss_pred ceEEEEeccccCccccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCccccc-CCcceeecCCceEEEE
Confidence 3555555544333233556788999999999999965 4789999999999999986643333 2333445444567899
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 357 (812)
+.|+|...++|+++.. |+++|||+.+++ ....+.+|...|.+..|+.+|. +|++++.|..|+|||.|.. ...
T Consensus 134 l~fHpTaDgil~s~a~-g~v~i~D~stqk----~~~el~~h~d~vQSa~WseDG~-llatscKdkqirifDPRa~--~~p 205 (1012)
T KOG1445|consen 134 LRFHPTADGILASGAH-GSVYITDISTQK----TAVELSGHTDKVQSADWSEDGK-LLATSCKDKQIRIFDPRAS--MEP 205 (1012)
T ss_pred eecccCcCceEEeccC-ceEEEEEcccCc----eeecccCCchhhhccccccCCc-eEeeecCCcceEEeCCccC--CCc
Confidence 9999998788888874 999999999987 6778899999999999999999 8999999999999999963 344
Q ss_pred eeecCCcCCCC-eEEEEEcCCCCEEEEEeCC----CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 358 MLTLPNAHTSD-VNVISWNRTEPLIVSGGDD----GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 358 ~~~~~~~~~~~-v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
+... .+|.+. =..+.|.-+-..|++.+.+ ..|++||.|++........+.. +..|.---|.|+...++++|-.
T Consensus 206 iQ~t-e~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~-stGvLiPl~DpDt~llfLaGKG 283 (1012)
T KOG1445|consen 206 IQTT-EGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDS-STGVLIPLYDPDTRLLFLAGKG 283 (1012)
T ss_pred cccc-cccccchhheeeeccchhhhhhcccchhhheeeeeeeccccCCcceeEEeec-ccceEeeeecCCCceEEEecCC
Confidence 4444 666543 3446777555556655544 5689999998654333333332 3345555688986555666666
Q ss_pred CCCEEEEEcCCCC
Q psy4510 433 DDQIALWDLAVER 445 (812)
Q Consensus 433 dg~v~iwd~~~~~ 445 (812)
+.++..+.+...+
T Consensus 284 ~~~l~~lE~~d~q 296 (1012)
T KOG1445|consen 284 TNKLFMLEMQDRQ 296 (1012)
T ss_pred cceEEEEEecCCC
Confidence 7888888876554
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=251.38 Aligned_cols=288 Identities=20% Similarity=0.312 Sum_probs=239.0
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcc--cccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAW--QVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
++..+..++++|.|||.||.|++|++...... ......++.|.++|..++...+++.|++++.|.+|++|+...+
T Consensus 29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~--- 105 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKD--- 105 (735)
T ss_pred hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccC---
Confidence 56666658889999999999999998865432 3347789999999999999999999999999999999999875
Q ss_pred CCCCCCceEEcCCCCcEEEEEe-cCCCCCEEEEEeCCCcEEEEeCCCCCc------ceecccccc-CCCCCEEEEEEcCC
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDW-SSTEPGVLATGDCKRNIHIWTPREAGA------WQVDQKPLV-GHTNSVEDLQWSPG 330 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~-sp~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~~~~~~-~h~~~v~~~~~~p~ 330 (812)
..-+..++..|.+-|.||+. .++. .++|+|+-|+.|.+||+.++.. ..+....+. |+..+|++++.++.
T Consensus 106 --~~~c~stir~H~DYVkcla~~ak~~-~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t 182 (735)
T KOG0308|consen 106 --NTFCMSTIRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQT 182 (735)
T ss_pred --cchhHhhhhcccchheeeeecccCc-eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCc
Confidence 23677889999999999999 5555 7999999999999999997632 111223344 89999999999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
+. +|++|+..+.|++||.++ ...+..+ .+|...|.++..+++|..+++++.||+|++||++ ..+++.++..|
T Consensus 183 ~t-~ivsGgtek~lr~wDprt---~~kimkL-rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg---qQrCl~T~~vH 254 (735)
T KOG0308|consen 183 GT-IIVSGGTEKDLRLWDPRT---CKKIMKL-RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG---QQRCLATYIVH 254 (735)
T ss_pred ce-EEEecCcccceEEecccc---ccceeee-eccccceEEEEEcCCCCeEeecCCCceEEeeecc---ccceeeeEEec
Confidence 96 899999999999999995 4456666 6999999999999999999999999999999998 57899999999
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...|.++..+|.- ..+.+|+.||.|..=|+++.. .+........+|..+..+......-+++.
T Consensus 255 ~e~VWaL~~~~sf-~~vYsG~rd~~i~~Tdl~n~~----------------~~tlick~daPv~~l~~~~~~~~~WvtTt 317 (735)
T KOG0308|consen 255 KEGVWALQSSPSF-THVYSGGRDGNIYRTDLRNPA----------------KSTLICKEDAPVLKLHLHEHDNSVWVTTT 317 (735)
T ss_pred cCceEEEeeCCCc-ceEEecCCCCcEEecccCCch----------------hheEeecCCCchhhhhhccccCCceeeec
Confidence 9999999999875 689999999999999998863 33333444556777777755556677777
Q ss_pred CCCeEEEEe
Q psy4510 491 NSGFNIFRT 499 (812)
Q Consensus 491 ~~~~~~~~~ 499 (812)
+..+..|..
T Consensus 318 ds~I~rW~~ 326 (735)
T KOG0308|consen 318 DSSIKRWKL 326 (735)
T ss_pred cccceecCC
Confidence 777777643
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-27 Score=253.44 Aligned_cols=279 Identities=16% Similarity=0.213 Sum_probs=207.7
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc---------cccccccCCCCCCeeeeeEcC-CCCcEEEeeCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW---------QVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDP 244 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~---------~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d 244 (812)
|-..|.....++ ++..+++++.+.....|+...+... ......+.+|.+.|.+++|+| ++++|++++.|
T Consensus 19 ~~~~i~~~~~~~-d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D 97 (493)
T PTZ00421 19 HFLNVTPSTALW-DCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED 97 (493)
T ss_pred ceeccccccccC-CCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence 445566677777 7666777777777777765543211 111234789999999999999 88899999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
++|++|++..+........++..+.+|...|.+++|+|.+..+|++|+.|++|+|||+.++. ....+.+|...|.+
T Consensus 98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~----~~~~l~~h~~~V~s 173 (493)
T PTZ00421 98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGK----AVEVIKCHSDQITS 173 (493)
T ss_pred CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCe----EEEEEcCCCCceEE
Confidence 99999999764211112357788999999999999999876799999999999999999876 45677889999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC-eEEEEEcCCCCEEEEEe----CCCcEEEEecCCCC
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNRTEPLIVSGG----DDGCIHVWDLRRFK 399 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg~----~dg~i~iwd~~~~~ 399 (812)
++|+|++. +|++++.|++|+|||++++ ..+..+ .+|.+. +..+.|.+++..+++++ .|+.|++||+++.
T Consensus 174 la~spdG~-lLatgs~Dg~IrIwD~rsg---~~v~tl-~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~- 247 (493)
T PTZ00421 174 LEWNLDGS-LLCTTSKDKKLNIIDPRDG---TIVSSV-EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKM- 247 (493)
T ss_pred EEEECCCC-EEEEecCCCEEEEEECCCC---cEEEEE-ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCC-
Confidence 99999998 7999999999999999953 345555 566654 45778999887776654 4789999999863
Q ss_pred CCCceEEcccC-CCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 400 KGSSVATFKHH-TAPVTTVEWHPTESSTFASGG-ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 400 ~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
..++.....+ ...+....|++++ .+|++++ .|+.|++||+..... ..........++..++
T Consensus 248 -~~p~~~~~~d~~~~~~~~~~d~d~-~~L~lggkgDg~Iriwdl~~~~~---------------~~~~~~~s~~~~~g~~ 310 (493)
T PTZ00421 248 -ASPYSTVDLDQSSALFIPFFDEDT-NLLYIGSKGEGNIRCFELMNERL---------------TFCSSYSSVEPHKGLC 310 (493)
T ss_pred -CCceeEeccCCCCceEEEEEcCCC-CEEEEEEeCCCeEEEEEeeCCce---------------EEEeeccCCCCCcceE
Confidence 3455544433 3455666788886 5777776 599999999987632 1111122234577888
Q ss_pred EcCC
Q psy4510 478 WHPQ 481 (812)
Q Consensus 478 ~~p~ 481 (812)
|.|.
T Consensus 311 ~~pk 314 (493)
T PTZ00421 311 MMPK 314 (493)
T ss_pred eccc
Confidence 8885
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=237.78 Aligned_cols=287 Identities=19% Similarity=0.293 Sum_probs=230.6
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeE
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
+..+.||.+.|.+|+=+|.....+++|+.||.|+|||+.... +...+..|.+.|..|++.. + -+++++.|.+|
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~----~~~~f~AH~G~V~Gi~v~~-~--~~~tvgdDKtv 131 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE----CIRTFKAHEGLVRGICVTQ-T--SFFTVGDDKTV 131 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh----hhheeecccCceeeEEecc-c--ceEEecCCcce
Confidence 456789999999999999876789999999999999999887 7889999999999999988 3 48999999999
Q ss_pred EEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCC
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 424 (812)
+.|.+.. ..+.++ ...+.+..|.-+..+..++|+|.+ |.|||.. ...|+..+......|.++.|+|...
T Consensus 132 K~wk~~~----~p~~ti--lg~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~---R~~Pv~smswG~Dti~svkfNpvET 200 (433)
T KOG0268|consen 132 KQWKIDG----PPLHTI--LGKSVYLGIDHHRKNSVFATCGEQ--IDIWDEQ---RDNPVSSMSWGADSISSVKFNPVET 200 (433)
T ss_pred eeeeccC----Ccceee--eccccccccccccccccccccCce--eeecccc---cCCccceeecCCCceeEEecCCCcc
Confidence 9999874 234444 335667788888888899999865 9999998 4678999998899999999999998
Q ss_pred cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCC
Q psy4510 425 STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLP 504 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 504 (812)
.+|++++.|+.|.+||++..... . . +++ +
T Consensus 201 sILas~~sDrsIvLyD~R~~~Pl----------------~----------K---------Vi~-~--------------- 229 (433)
T KOG0268|consen 201 SILASCASDRSIVLYDLRQASPL----------------K----------K---------VIL-T--------------- 229 (433)
T ss_pred hheeeeccCCceEEEecccCCcc----------------c----------e---------eee-e---------------
Confidence 89999999999999999987421 0 0 000 0
Q ss_pred cccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe
Q psy4510 505 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI 584 (812)
Q Consensus 505 ~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (812)
T Consensus 230 -------------------------------------------------------------------------------- 229 (433)
T KOG0268|consen 230 -------------------------------------------------------------------------------- 229 (433)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEe
Q psy4510 585 RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 664 (812)
Q Consensus 585 ~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~ 664 (812)
...+.++|+|.+-.+++| ++|..++.||+..... ++...++|...|++++|
T Consensus 230 ---mRTN~IswnPeafnF~~a--~ED~nlY~~DmR~l~~------------------------p~~v~~dhvsAV~dVdf 280 (433)
T KOG0268|consen 230 ---MRTNTICWNPEAFNFVAA--NEDHNLYTYDMRNLSR------------------------PLNVHKDHVSAVMDVDF 280 (433)
T ss_pred ---ccccceecCccccceeec--cccccceehhhhhhcc------------------------cchhhcccceeEEEecc
Confidence 023446677755456666 8999999999987652 78889999999999999
Q ss_pred CCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCC---cceeEe
Q psy4510 665 SSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT---NSVEDL 741 (812)
Q Consensus 665 sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~---~~V~~l 741 (812)
|| -|+-++|||.|++||||.+.. +.. .-..|+ ..|.|+
T Consensus 281 sp-tG~EfvsgsyDksIRIf~~~~--------------------------------~~S------RdiYhtkRMq~V~~V 321 (433)
T KOG0268|consen 281 SP-TGQEFVSGSYDKSIRIFPVNH--------------------------------GHS------RDIYHTKRMQHVFCV 321 (433)
T ss_pred CC-CcchhccccccceEEEeecCC--------------------------------Ccc------hhhhhHhhhheeeEE
Confidence 99 788888888888887777642 221 111222 368999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.||.|.+ |++|||.|+.||+|.-.+.+
T Consensus 322 k~S~Dsk-yi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 322 KYSMDSK-YIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred EEecccc-EEEecCCCcceeeeecchhh
Confidence 9999999 89999999999999877665
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-27 Score=207.41 Aligned_cols=303 Identities=22% Similarity=0.262 Sum_probs=232.5
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCC-----------CcccccccccCCCCCCeeeeeEcCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-----------GAWQVDQKPLGGHTNSAEDLQWSDL 234 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~-----------~~~~~~~~~l~~h~~~V~~l~~s~~ 234 (812)
+.-|..+ .....|.+++|+| .|.+.|+|+...+.+|-....- ..+....+.-+.|++.|+|.+|||.
T Consensus 23 f~~i~~l-~dsqairav~fhp-~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 23 FEAINIL-EDSQAIRAVAFHP-AGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred eEEEEEe-cchhheeeEEecC-CCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 4456667 6678899999999 9999999999999988743321 1123334556789999999999999
Q ss_pred CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC---CCCEEEEEeC-CCcEEEEeCCCCCccee
Q psy4510 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST---EPGVLATGDC-KRNIHIWTPREAGAWQV 310 (812)
Q Consensus 235 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~~~l~sg~~-dg~i~vwd~~~~~~~~~ 310 (812)
|.+|++|++|.+|++.-+...... ...+-..|.-|.+.|..++|..+ +..+|++++. |..|++-|-..+.
T Consensus 101 geliatgsndk~ik~l~fn~dt~~--~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~---- 174 (350)
T KOG0641|consen 101 GELIATGSNDKTIKVLPFNADTCN--ATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQ---- 174 (350)
T ss_pred cCeEEecCCCceEEEEeccccccc--ccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCC----
Confidence 999999999999999876653111 12345667889999999999643 3256777664 6677777877776
Q ss_pred ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cC-----CCCeEEEEEcCCCCEEEEE
Q psy4510 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AH-----TSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~-----~~~v~~l~~~~~~~~l~sg 384 (812)
....+.+|++-|.++- +-++- +|++|+.|.+||+||+|. ..|+.++.. -| .+.|.+++..|.|++|++|
T Consensus 175 ~~~a~sghtghilaly-swn~~-m~~sgsqdktirfwdlrv---~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg 249 (350)
T KOG0641|consen 175 GFHALSGHTGHILALY-SWNGA-MFASGSQDKTIRFWDLRV---NSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASG 249 (350)
T ss_pred cceeecCCcccEEEEE-EecCc-EEEccCCCceEEEEeeec---cceeeeccCcccCCCcccceeEEEEECCCcceeeec
Confidence 5778899999998873 33454 799999999999999994 445554421 12 3679999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
-.|....+||+| .+++++.+..|...|.++.|+|. ..++++++.|..|++=|+...-. ..+ ..+
T Consensus 250 ~~dssc~lydir---g~r~iq~f~phsadir~vrfsp~-a~yllt~syd~~ikltdlqgdla----------~el--~~~ 313 (350)
T KOG0641|consen 250 HADSSCMLYDIR---GGRMIQRFHPHSADIRCVRFSPG-AHYLLTCSYDMKIKLTDLQGDLA----------HEL--PIM 313 (350)
T ss_pred cCCCceEEEEee---CCceeeeeCCCccceeEEEeCCC-ceEEEEecccceEEEeecccchh----------hcC--ceE
Confidence 999999999999 68899999999999999999996 58999999999999999875421 111 344
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
.+..+...+..+.|+|+.- .+++++.+.....|
T Consensus 314 vv~ehkdk~i~~rwh~~d~-sfisssadkt~tlw 346 (350)
T KOG0641|consen 314 VVAEHKDKAIQCRWHPQDF-SFISSSADKTATLW 346 (350)
T ss_pred EEEeccCceEEEEecCccc-eeeeccCcceEEEe
Confidence 4555566788999999974 55555555544333
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=241.12 Aligned_cols=227 Identities=18% Similarity=0.245 Sum_probs=175.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+...+.+|+..|+++++.|.|..|++|+.|..|++||+..........+.+.- .....|.++.|++.+ ..|++.+..
T Consensus 159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P--~E~h~i~sl~ys~Tg-~~iLvvsg~ 235 (641)
T KOG0772|consen 159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP--CETHQINSLQYSVTG-DQILVVSGS 235 (641)
T ss_pred ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCc--ccccccceeeecCCC-CeEEEEecC
Confidence 34567899999999999999999999999999999999875211111122221 233568999999999 565555556
Q ss_pred CcEEEEeCCCCC--------cceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC--Cc
Q psy4510 295 RNIHIWTPREAG--------AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP--NA 364 (812)
Q Consensus 295 g~i~vwd~~~~~--------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~ 364 (812)
...+|+|-.... ........-+||...++|.+|+|..+..|++|+.||++||||+........+.... .+
T Consensus 236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g 315 (641)
T KOG0772|consen 236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGG 315 (641)
T ss_pred cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCC
Confidence 789999865432 11222345678999999999999999999999999999999998654333333221 23
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA--PVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 365 ~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..-.+++++|+++|++||+|..||.|.+|+.+..........-.+|.. .|++|.|+++| ++|++-|.|+++++||++
T Consensus 316 ~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg-~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 316 KRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDG-NYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred cccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecccc-chhhhccCCCceeeeecc
Confidence 455789999999999999999999999999876444444555567877 99999999997 799999999999999999
Q ss_pred CCC
Q psy4510 443 VER 445 (812)
Q Consensus 443 ~~~ 445 (812)
..+
T Consensus 395 q~k 397 (641)
T KOG0772|consen 395 QFK 397 (641)
T ss_pred ccc
Confidence 875
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=225.26 Aligned_cols=297 Identities=16% Similarity=0.276 Sum_probs=234.1
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCC-------------C-cccccccccCCCCCCeeeeeEcCCCC
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-------------G-AWQVDQKPLGGHTNSAEDLQWSDLKT 236 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~-------------~-~~~~~~~~l~~h~~~V~~l~~s~~~~ 236 (812)
.++.|..++.+.+||| +|.++|||+.|-.|+|.|++.. . .....+++|..|...|+++.|.|...
T Consensus 107 ylt~HK~~cR~aafs~-DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSP-DGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEeecccceeeeeeCC-CCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 3447999999999999 9999999999999999998721 1 11245678999999999999999999
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
.|++++.|++|+++|+... ..+..+.......+|.++.|+|.| .+|+.|..-.++++||+.+.++... ..+-.
T Consensus 186 ILiS~srD~tvKlFDfsK~-----saKrA~K~~qd~~~vrsiSfHPsG-efllvgTdHp~~rlYdv~T~Qcfvs-anPd~ 258 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKT-----SAKRAFKVFQDTEPVRSISFHPSG-EFLLVGTDHPTLRLYDVNTYQCFVS-ANPDD 258 (430)
T ss_pred eEEeccCCCeEEEEecccH-----HHHHHHHHhhccceeeeEeecCCC-ceEEEecCCCceeEEeccceeEeee-cCccc
Confidence 9999999999999999864 122222223345789999999999 7999999999999999999875433 34667
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC-CeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-DVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.|++.|+++.+++.++ +.++++.||.|+|||-- ..+|+.++..+|.+ .|.+..|..+++++++.|.|..+++|.+
T Consensus 259 qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGV---S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi 334 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGV---SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEI 334 (430)
T ss_pred ccccceeEEEecCCcc-EEEEeccCCcEEeeccc---cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeee
Confidence 7999999999999999 89999999999999976 67789999888865 5889999999999999999999999999
Q ss_pred CCCCCCCceEEcccC-----CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC
Q psy4510 396 RRFKKGSSVATFKHH-----TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ 470 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (812)
. +++++..+.+- ..--+...|+.....+|.---..+.+.-||.++... ..+....+.
T Consensus 335 ~---t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr---------------~~l~slgHn 396 (430)
T KOG0640|consen 335 S---TGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADR---------------VALLSLGHN 396 (430)
T ss_pred c---CCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhh---------------hhhcccCCC
Confidence 8 57788877653 111234557666554444444567899999998743 222333445
Q ss_pred CceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 471 KEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 471 ~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
+.+..+.-+|..| .+++++.|....||
T Consensus 397 ~a~R~i~HSP~~p-~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 397 GAVRWIVHSPVEP-AFMTCSDDFRARFW 423 (430)
T ss_pred CCceEEEeCCCCC-ceeeecccceeeee
Confidence 6789999999987 45566666544444
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=234.48 Aligned_cols=275 Identities=24% Similarity=0.363 Sum_probs=223.2
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee------ccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV------DQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~------~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
...|.++|+.+.+.|+.+.++|+++..+.|.|||..+...... +...+.+|.+.-++++|++.....|++++.|
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 3459999999999999999999999999999999876543211 2236889999889999999888889999999
Q ss_pred CeEEEEECCCCCcc---cceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE
Q psy4510 342 LSIRIWDTRVINTK---SCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417 (812)
Q Consensus 342 g~i~iwd~~~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 417 (812)
++|++||+...... ........+|...|..++|++... +|++++.|+.+.|||+|.. +.++.+...+|.++|.++
T Consensus 200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~~~~~~~ah~~~vn~~ 278 (422)
T KOG0264|consen 200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSKPSHSVKAHSAEVNCV 278 (422)
T ss_pred CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCCCcccccccCCceeEE
Confidence 99999999865441 222334489999999999999765 9999999999999999974 567778889999999999
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
+|+|.+..+||+||.|++|.+||++....
T Consensus 279 ~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--------------------------------------------------- 307 (422)
T KOG0264|consen 279 AFNPFNEFILATGSADKTVALWDLRNLNK--------------------------------------------------- 307 (422)
T ss_pred EeCCCCCceEEeccCCCcEEEeechhccc---------------------------------------------------
Confidence 99999999999999999999999987731
Q ss_pred EeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 498 RTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
T Consensus 308 -------------------------------------------------------------------------------- 307 (422)
T KOG0264|consen 308 -------------------------------------------------------------------------------- 307 (422)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC
Q psy4510 578 VMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 657 (812)
Q Consensus 578 ~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~ 657 (812)
....+.+|...|.++.|||....+++.+ +.|+++.+||+..-.... ........+.+++..-.||..
T Consensus 308 -~lh~~e~H~dev~~V~WSPh~etvLASS-g~D~rl~vWDls~ig~eq-----------~~eda~dgppEllF~HgGH~~ 374 (422)
T KOG0264|consen 308 -PLHTFEGHEDEVFQVEWSPHNETVLASS-GTDRRLNVWDLSRIGEEQ-----------SPEDAEDGPPELLFIHGGHTA 374 (422)
T ss_pred -CceeccCCCcceEEEEeCCCCCceeEec-ccCCcEEEEecccccccc-----------ChhhhccCCcceeEEecCccc
Confidence 0123456666778888888777666654 799999999998653211 011222234557889999999
Q ss_pred ceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 658 EGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 658 ~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
.|..+.|+|..+..|+|++.|+.+.||...
T Consensus 375 kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 375 KVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 999999999999999999999999999874
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=245.95 Aligned_cols=278 Identities=23% Similarity=0.372 Sum_probs=225.3
Q ss_pred eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
-+.|+. ...|+ .+....+.+|+..++ ....+..+ +...|+++.|+++| ..|++|..+|.|.|||+.+..
T Consensus 182 lldWss-~n~la-Valg~~vylW~~~s~-----~v~~l~~~--~~~~vtSv~ws~~G-~~LavG~~~g~v~iwD~~~~k- 250 (484)
T KOG0305|consen 182 LLDWSS-ANVLA-VALGQSVYLWSASSG-----SVTELCSF--GEELVTSVKWSPDG-SHLAVGTSDGTVQIWDVKEQK- 250 (484)
T ss_pred Hhhccc-CCeEE-EEecceEEEEecCCC-----ceEEeEec--CCCceEEEEECCCC-CEEEEeecCCeEEEEehhhcc-
Confidence 356662 23344 445678999999885 22233333 37899999999999 899999999999999998887
Q ss_pred ceeccccccC-CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 308 WQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 308 ~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
....+.+ |...|-+++|.. . ++.+|+.|+.|..+|+|..+.. .....+|...|..+.|++++.++|+|+.
T Consensus 251 ---~~~~~~~~h~~rvg~laW~~--~-~lssGsr~~~I~~~dvR~~~~~---~~~~~~H~qeVCgLkws~d~~~lASGgn 321 (484)
T KOG0305|consen 251 ---KTRTLRGSHASRVGSLAWNS--S-VLSSGSRDGKILNHDVRISQHV---VSTLQGHRQEVCGLKWSPDGNQLASGGN 321 (484)
T ss_pred ---ccccccCCcCceeEEEeccC--c-eEEEecCCCcEEEEEEecchhh---hhhhhcccceeeeeEECCCCCeeccCCC
Confidence 4667777 999999999993 3 7999999999999999965433 2223889999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC--CCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
|+.+.|||.. ...++..+..|.+.|..++|+|..+.+||+|+. |++|++||..++...
T Consensus 322 DN~~~Iwd~~---~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i----------------- 381 (484)
T KOG0305|consen 322 DNVVFIWDGL---SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARI----------------- 381 (484)
T ss_pred ccceEeccCC---CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEe-----------------
Confidence 9999999996 567889999999999999999998889999864 999999999876310
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEe
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 544 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~ 544 (812)
.....
T Consensus 382 ~~vdt--------------------------------------------------------------------------- 386 (484)
T KOG0305|consen 382 DSVDT--------------------------------------------------------------------------- 386 (484)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 00000
Q ss_pred ecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccc
Q psy4510 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQT 624 (812)
Q Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~ 624 (812)
...|..+.|++..+-++++-|..++.|.||++.+..
T Consensus 387 ------------------------------------------gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~-- 422 (484)
T KOG0305|consen 387 ------------------------------------------GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMK-- 422 (484)
T ss_pred ------------------------------------------CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccc--
Confidence 014556666666666777666677899999999876
Q ss_pred cCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 625 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
++..+.||..+|..+++|| ++..+++|+.|.++++|++..
T Consensus 423 -----------------------~~~~l~gH~~RVl~la~SP-dg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 423 -----------------------LVAELLGHTSRVLYLALSP-DGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred -----------------------eeeeecCCcceeEEEEECC-CCCEEEEecccCcEEeccccC
Confidence 6888999999999999999 899999999999999999854
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=235.64 Aligned_cols=288 Identities=21% Similarity=0.365 Sum_probs=235.7
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+.+..+.||.+.|.|++=+|..-..+|+|+.||.|+|||+.+.. +..++..|.+.|..|++.. ..+++++.|.
T Consensus 56 kPFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~----~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 56 KPFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE----CIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred ccchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh----hhheeecccCceeeEEecc--cceEEecCCc
Confidence 355677789999999999999444899999999999999999877 8899999999999999987 6789999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
+|+.|.+.. .++.++.+ .+.+..+.-+..+ ..++|++. .|.|||..... +...+.--...|.++
T Consensus 130 tvK~wk~~~--------~p~~tilg-~s~~~gIdh~~~~-~~FaTcGe--~i~IWD~~R~~----Pv~smswG~Dti~sv 193 (433)
T KOG0268|consen 130 TVKQWKIDG--------PPLHTILG-KSVYLGIDHHRKN-SVFATCGE--QIDIWDEQRDN----PVSSMSWGADSISSV 193 (433)
T ss_pred ceeeeeccC--------Ccceeeec-ccccccccccccc-ccccccCc--eeeecccccCC----ccceeecCCCceeEE
Confidence 999999876 47777765 4567777777766 78899885 69999998776 567777778899999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
.|+|....+|++|+.|+.|.+||+|+.. ++..+ .-...-+.|+|+|.+-.|++|+.|..++.||+|. -..++.
T Consensus 194 kfNpvETsILas~~sDrsIvLyD~R~~~---Pl~KV--i~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~--l~~p~~ 266 (433)
T KOG0268|consen 194 KFNPVETSILASCASDRSIVLYDLRQAS---PLKKV--ILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRN--LSRPLN 266 (433)
T ss_pred ecCCCcchheeeeccCCceEEEecccCC---cccee--eeeccccceecCccccceeeccccccceehhhhh--hcccch
Confidence 9999999999999999999999999544 33333 2244568899999666899999999999999998 457899
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
.+++|...|+++.|+|.| +-|++||.|.+|+||..+.....+.. -......|.++.|+-+.. .
T Consensus 267 v~~dhvsAV~dVdfsptG-~EfvsgsyDksIRIf~~~~~~SRdiY---------------htkRMq~V~~Vk~S~Dsk-y 329 (433)
T KOG0268|consen 267 VHKDHVSAVMDVDFSPTG-QEFVSGSYDKSIRIFPVNHGHSRDIY---------------HTKRMQHVFCVKYSMDSK-Y 329 (433)
T ss_pred hhcccceeEEEeccCCCc-chhccccccceEEEeecCCCcchhhh---------------hHhhhheeeEEEEecccc-E
Confidence 999999999999999998 68999999999999999887542211 111123689999999975 4
Q ss_pred EEEEeCC-CeEEEEe
Q psy4510 486 IISTANS-GFNIFRT 499 (812)
Q Consensus 486 ~~~~~~~-~~~~~~~ 499 (812)
+++++++ .+.+|+.
T Consensus 330 i~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 330 IISGSDDGNVRLWKA 344 (433)
T ss_pred EEecCCCcceeeeec
Confidence 5555554 4677754
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=227.40 Aligned_cols=283 Identities=14% Similarity=0.228 Sum_probs=237.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccc----ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD----QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~----~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
|...-+-|+.||| +|++|++|+.||.|.+|+..+++..... ...+--+..+|.|+.||.|...||+|+.||.|+|
T Consensus 211 g~KSh~EcA~FSP-DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSP-DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCC-CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEE
Confidence 5667788999999 9999999999999999999988732211 1234457899999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
|.+.+| .++..|. .|+..|+|+.||.++ ..+++++.|.++++--+.+++ ..+.+.||.+.|+...|+
T Consensus 290 Wri~tG-------~ClRrFdrAHtkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK----~LKEfrGHsSyvn~a~ft 357 (508)
T KOG0275|consen 290 WRIETG-------QCLRRFDRAHTKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGK----CLKEFRGHSSYVNEATFT 357 (508)
T ss_pred EEEecc-------hHHHHhhhhhccCeeEEEEccCc-chhhcccccceEEEeccccch----hHHHhcCccccccceEEc
Confidence 999997 7888886 899999999999999 789999999999999999998 789999999999999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
++|.+ +++++.||+|++|+.. +..|+.++.. +...+|+++-.-|.++ .++++....+|.|-++ .++.+.+
T Consensus 358 ~dG~~-iisaSsDgtvkvW~~K---tteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~----qGQvVrs 429 (508)
T KOG0275|consen 358 DDGHH-IISASSDGTVKVWHGK---TTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM----QGQVVRS 429 (508)
T ss_pred CCCCe-EEEecCCccEEEecCc---chhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec----cceEEee
Confidence 99995 9999999999999998 4556666632 3456789998888775 8899999999999999 5788888
Q ss_pred cccC---CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 407 FKHH---TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 407 ~~~h---~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
|... .+...+...+|.| .++.+.+.|+.++.+...+++.. .+...+.+.+..++-||..
T Consensus 430 fsSGkREgGdFi~~~lSpkG-ewiYcigED~vlYCF~~~sG~LE----------------~tl~VhEkdvIGl~HHPHq- 491 (508)
T KOG0275|consen 430 FSSGKREGGDFINAILSPKG-EWIYCIGEDGVLYCFSVLSGKLE----------------RTLPVHEKDVIGLTHHPHQ- 491 (508)
T ss_pred eccCCccCCceEEEEecCCC-cEEEEEccCcEEEEEEeecCcee----------------eeeecccccccccccCccc-
Confidence 7643 4567778899998 48999999999999999888532 2333445678888889986
Q ss_pred CEEEEEeCCCeE
Q psy4510 484 GTIISTANSGFN 495 (812)
Q Consensus 484 ~~~~~~~~~~~~ 495 (812)
.++++-+.|+..
T Consensus 492 NllAsYsEDgll 503 (508)
T KOG0275|consen 492 NLLASYSEDGLL 503 (508)
T ss_pred chhhhhcccchh
Confidence 467777777753
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=222.11 Aligned_cols=227 Identities=22% Similarity=0.374 Sum_probs=195.8
Q ss_pred EEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCC
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 271 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h 271 (812)
|++.-.++++..- ..+.+.||++.|..++.......+.+++.|.+.+||.++++ +++.++.||
T Consensus 127 ivssFk~~t~~~~----------lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg-------~CL~~Y~GH 189 (481)
T KOG0300|consen 127 IVSSFKDGTVKFR----------LVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESG-------ACLATYTGH 189 (481)
T ss_pred heeeecCCceeEe----------ehhhhcccccceeeehhhcCCcceeecccccceeEEeeccc-------cceeeeccc
Confidence 4444446665543 67889999999999999888889999999999999999997 999999999
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEe------CCC------------------------------CCcceeccccc
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWT------PRE------------------------------AGAWQVDQKPL 315 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd------~~~------------------------------~~~~~~~~~~~ 315 (812)
.+.|++++|++.+ .++++++.|++-+||. +.. +....++...+
T Consensus 190 ~GSVNsikfh~s~-~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l 268 (481)
T KOG0300|consen 190 TGSVNSIKFHNSG-LLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL 268 (481)
T ss_pred ccceeeEEecccc-ceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee
Confidence 9999999999998 8999999999999997 211 00133456678
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
++|.+.|.+..|...++. +++++.|.+..+||+.++ ..+..+ .+|....+-++-+|..+++++.+.|.+.++||.
T Consensus 269 tgH~~vV~a~dWL~gg~Q-~vTaSWDRTAnlwDVEtg---e~v~~L-tGHd~ELtHcstHptQrLVvTsSrDtTFRLWDF 343 (481)
T KOG0300|consen 269 TGHRAVVSACDWLAGGQQ-MVTASWDRTANLWDVETG---EVVNIL-TGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDF 343 (481)
T ss_pred eccccceEehhhhcCcce-eeeeeccccceeeeeccC---ceeccc-cCcchhccccccCCcceEEEEeccCceeEeccc
Confidence 899999999999999984 999999999999999853 344444 899999999999999999999999999999999
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|. ....+..|++|+..|+++.|.-++ .+++|+.|.+|++||+++.+
T Consensus 344 Re--aI~sV~VFQGHtdtVTS~vF~~dd--~vVSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 344 RE--AIQSVAVFQGHTDTVTSVVFNTDD--RVVSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred hh--hcceeeeecccccceeEEEEecCC--ceeecCCCceEEEeeecccc
Confidence 95 667889999999999999999875 69999999999999999874
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-29 Score=238.03 Aligned_cols=291 Identities=20% Similarity=0.325 Sum_probs=231.3
Q ss_pred CCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 165 ~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
+..-...+..|.+.+..+.|-+ +...|+|||.|..|++|++...+ .....+|.|..++|+++.|.++++++++++.|
T Consensus 164 pS~~~~~ld~h~gev~~v~~l~-~sdtlatgg~Dr~Ik~W~v~~~k--~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d 240 (459)
T KOG0288|consen 164 PSRALFVLDAHEGEVHDVEFLR-NSDTLATGGSDRIIKLWNVLGEK--SELISTLAGSLGNITSIDFDSDNKHVIAASND 240 (459)
T ss_pred chhhhhhhhccccccceeEEcc-Ccchhhhcchhhhhhhhhcccch--hhhhhhhhccCCCcceeeecCCCceEEeecCC
Confidence 3333444446889999999999 99999999999999999988766 23667899999999999999999999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.+++|++... +...++.||++.|+++.|.... ..+++|+.|.+|++||+.... +.+.+. ..+.+.+
T Consensus 241 ~~~r~Wnvd~~-------r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WDl~k~~----C~kt~l-~~S~cnD 307 (459)
T KOG0288|consen 241 KNLRLWNVDSL-------RLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWDLQKAY----CSKTVL-PGSQCND 307 (459)
T ss_pred Cceeeeeccch-------hhhhhhcccccceeeehhhccc-cceeeccccchhhhhhhhhhh----eecccc-ccccccc
Confidence 99999999985 8889999999999999999876 559999999999999999866 333332 3456777
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
|+.++ . .+++|-.|++||+||+|. ..+.... .. .+.|+++..++++..+.+++.|.++.+.|+|. ....
T Consensus 308 I~~~~--~-~~~SgH~DkkvRfwD~Rs---~~~~~sv-~~-gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt---~eI~ 376 (459)
T KOG0288|consen 308 IVCSI--S-DVISGHFDKKVRFWDIRS---ADKTRSV-PL-GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRT---KEIR 376 (459)
T ss_pred eEecc--e-eeeecccccceEEEeccC---CceeeEe-ec-CcceeeEeeccCCeEEeeecCCCceeeeeccc---ccEE
Confidence 77763 2 589999999999999994 4445555 33 34899999999999888899999999999995 4444
Q ss_pred EEcccC----CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC
Q psy4510 405 ATFKHH----TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480 (812)
Q Consensus 405 ~~~~~h----~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 480 (812)
..+... ....+.+.|||++ .++++||.||.|+||++.+++.. ..+........|++++|+|
T Consensus 377 ~~~sA~g~k~asDwtrvvfSpd~-~YvaAGS~dgsv~iW~v~tgKlE--------------~~l~~s~s~~aI~s~~W~~ 441 (459)
T KOG0288|consen 377 QTFSAEGFKCASDWTRVVFSPDG-SYVAAGSADGSVYIWSVFTGKLE--------------KVLSLSTSNAAITSLSWNP 441 (459)
T ss_pred EEeeccccccccccceeEECCCC-ceeeeccCCCcEEEEEccCceEE--------------EEeccCCCCcceEEEEEcC
Confidence 444331 2348899999987 69999999999999999998542 1111122222699999999
Q ss_pred CCCCEEEEEeCCCeEEE
Q psy4510 481 QLPGTIISTANSGFNIF 497 (812)
Q Consensus 481 ~~~~~~~~~~~~~~~~~ 497 (812)
.+.+++.+.-.....+|
T Consensus 442 sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 442 SGSGLLSADKQKAVTLW 458 (459)
T ss_pred CCchhhcccCCcceEec
Confidence 98776666554444443
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-28 Score=222.18 Aligned_cols=308 Identities=20% Similarity=0.330 Sum_probs=249.7
Q ss_pred CCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 162 ~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
+....+.++.+.||.+.|+.++-.. ...++.|++.|.+.+||.++++. ++.+..||.+.|.++.|++.+.+++++
T Consensus 134 ~t~~~~lvre~~GHkDGiW~Vaa~~-tqpi~gtASADhTA~iWs~Esg~----CL~~Y~GH~GSVNsikfh~s~~L~lTa 208 (481)
T KOG0300|consen 134 GTVKFRLVRELEGHKDGIWHVAADS-TQPICGTASADHTARIWSLESGA----CLATYTGHTGSVNSIKFHNSGLLLLTA 208 (481)
T ss_pred CceeEeehhhhcccccceeeehhhc-CCcceeecccccceeEEeecccc----ceeeecccccceeeEEeccccceEEEc
Confidence 3445677888899999999999877 77799999999999999999998 889999999999999999999999999
Q ss_pred eCCCceEEeeC------CCCCCC-----------------------C----CCCCCceEEcCCCCcEEEEEecCCCCCEE
Q psy4510 242 DDPFQLAEHNK------KRGKGP-----------------------G----IPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288 (812)
Q Consensus 242 ~~d~~i~vwd~------~~~~~~-----------------------~----~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 288 (812)
+.|++..||.. .....+ . .-..|+..++||.+.|.+..|...+ ..+
T Consensus 209 SGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg-~Q~ 287 (481)
T KOG0300|consen 209 SGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGG-QQM 287 (481)
T ss_pred cCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCc-cee
Confidence 99999999972 111000 0 0124778899999999999999988 799
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
++++.|.+..+||++++. ....+.||....+.++-+|..+ ++++.+.|.+.++||.|. ....+..+ ++|...
T Consensus 288 vTaSWDRTAnlwDVEtge----~v~~LtGHd~ELtHcstHptQr-LVvTsSrDtTFRLWDFRe--aI~sV~VF-QGHtdt 359 (481)
T KOG0300|consen 288 VTASWDRTANLWDVETGE----VVNILTGHDSELTHCSTHPTQR-LVVTSSRDTTFRLWDFRE--AIQSVAVF-QGHTDT 359 (481)
T ss_pred eeeeccccceeeeeccCc----eeccccCcchhccccccCCcce-EEEEeccCceeEeccchh--hcceeeee-cccccc
Confidence 999999999999999998 7889999999999999999988 899999999999999993 34445555 899999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
|+++.|+.+. .+++|++|.+|+|||+++ ...++.+++ ...+++.++.+..+ .+++.--.+.+|++||++..+..
T Consensus 360 VTS~vF~~dd-~vVSgSDDrTvKvWdLrN--MRsplATIR-tdS~~NRvavs~g~-~iIAiPhDNRqvRlfDlnG~Rla- 433 (481)
T KOG0300|consen 360 VTSVVFNTDD-RVVSGSDDRTVKVWDLRN--MRSPLATIR-TDSPANRVAVSKGH-PIIAIPHDNRQVRLFDLNGNRLA- 433 (481)
T ss_pred eeEEEEecCC-ceeecCCCceEEEeeecc--ccCcceeee-cCCccceeEeecCC-ceEEeccCCceEEEEecCCCccc-
Confidence 9999999765 689999999999999998 456788877 46788999998754 47888777889999999877532
Q ss_pred HHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC-EEEEEeCCCeEEEEeC
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG-TIISTANSGFNIFRTI 500 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~~~~~~~~~~~~~~ 500 (812)
.+|.. ....+..-|.+++|....|. -+++++.+...+=|.+
T Consensus 434 ---------RlPrt--sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~i 475 (481)
T KOG0300|consen 434 ---------RLPRT--SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKI 475 (481)
T ss_pred ---------cCCcc--cccccceeeeeeeccccCcccccccccccceeeeeEe
Confidence 22211 11223346899999876553 3556666665544433
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-26 Score=210.01 Aligned_cols=279 Identities=16% Similarity=0.285 Sum_probs=230.0
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceE
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLA 248 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~ 248 (812)
+.+++|...|.+++|+- +|..||+|+.|+++.+|++..... .......+|.+.|-.++|.|.. .++++++.|.+|+
T Consensus 14 r~~~~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~--~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir 90 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRF--RKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIR 90 (313)
T ss_pred HHhhhhhhcceEEEEcc-cCceeeecccCCceEEEEecchhh--hhhhcccCCCcchhhheeCCCCCcceEEecCCceEE
Confidence 45559999999999999 999999999999999999987741 2334567999999999998754 6889999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||+..+ ++........ +-.-+.|+|+| .+++.|+.|..|.+.|.++.+. ... ......++.++|+
T Consensus 91 ~wd~r~~-------k~~~~i~~~~-eni~i~wsp~g-~~~~~~~kdD~it~id~r~~~~----~~~-~~~~~e~ne~~w~ 156 (313)
T KOG1407|consen 91 IWDIRSG-------KCTARIETKG-ENINITWSPDG-EYIAVGNKDDRITFIDARTYKI----VNE-EQFKFEVNEISWN 156 (313)
T ss_pred EEEeccC-------cEEEEeeccC-cceEEEEcCCC-CEEEEecCcccEEEEEecccce----eeh-hcccceeeeeeec
Confidence 9999986 7777665433 44468899999 8999999999999999988762 222 2244568889999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
.++. +|+.....|+|.|-... ..+++.++ .+|.....||.|+|+|++||+|+.|..+.+||+. ..-++..+.
T Consensus 157 ~~nd-~Fflt~GlG~v~ILsyp---sLkpv~si-~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~---ELiC~R~is 228 (313)
T KOG1407|consen 157 NSND-LFFLTNGLGCVEILSYP---SLKPVQSI-KAHPSNCICIEFDPDGRYFATGSADALVSLWDVD---ELICERCIS 228 (313)
T ss_pred CCCC-EEEEecCCceEEEEecc---cccccccc-ccCCcceEEEEECCCCceEeeccccceeeccChh---Hhhhheeec
Confidence 7666 67777778999998887 45667777 8999999999999999999999999999999998 456778888
Q ss_pred cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEE
Q psy4510 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 488 (812)
Q Consensus 409 ~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 488 (812)
.+.-+|..++|+-+| ++||+|+.|..|-|=++.++. .+.......+...++|||..+.+..+
T Consensus 229 RldwpVRTlSFS~dg-~~lASaSEDh~IDIA~vetGd-----------------~~~eI~~~~~t~tVAWHPk~~LLAyA 290 (313)
T KOG1407|consen 229 RLDWPVRTLSFSHDG-RMLASASEDHFIDIAEVETGD-----------------RVWEIPCEGPTFTVAWHPKRPLLAYA 290 (313)
T ss_pred cccCceEEEEeccCc-ceeeccCccceEEeEecccCC-----------------eEEEeeccCCceeEEecCCCceeeEE
Confidence 889999999999987 799999999999998888884 23333345688999999998766666
Q ss_pred EeC
Q psy4510 489 TAN 491 (812)
Q Consensus 489 ~~~ 491 (812)
+.+
T Consensus 291 ~dd 293 (313)
T KOG1407|consen 291 CDD 293 (313)
T ss_pred ecC
Confidence 654
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-27 Score=210.74 Aligned_cols=280 Identities=20% Similarity=0.325 Sum_probs=227.2
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
+.+.+|...|.+++|+.+|..|++|+.|+++++|++... ....-...++|.+.|-.++|.|..+.++++++.|.+
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 567899999999999999999999999999999999875 233345578999999999999999999999999999
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
|++||++.++. ...... .+.=.-+.|+|+|.+ ++.++.|..|.+.|.|+. +.+... .....++-++|+-
T Consensus 89 ir~wd~r~~k~----~~~i~~-~~eni~i~wsp~g~~-~~~~~kdD~it~id~r~~---~~~~~~--~~~~e~ne~~w~~ 157 (313)
T KOG1407|consen 89 IRIWDIRSGKC----TARIET-KGENINITWSPDGEY-IAVGNKDDRITFIDARTY---KIVNEE--QFKFEVNEISWNN 157 (313)
T ss_pred EEEEEeccCcE----EEEeec-cCcceEEEEcCCCCE-EEEecCcccEEEEEeccc---ceeehh--cccceeeeeeecC
Confidence 99999999873 333322 233346789999994 899999999999999843 333322 3456788999997
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhh
Q psy4510 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL 456 (812)
Q Consensus 377 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 456 (812)
++.+++.....|.|.|.... .-+++.+++.|.....+|.|+|+| ++||+|+.|..+.+||+...-+
T Consensus 158 ~nd~Fflt~GlG~v~ILsyp---sLkpv~si~AH~snCicI~f~p~G-ryfA~GsADAlvSLWD~~ELiC---------- 223 (313)
T KOG1407|consen 158 SNDLFFLTNGLGCVEILSYP---SLKPVQSIKAHPSNCICIEFDPDG-RYFATGSADALVSLWDVDELIC---------- 223 (313)
T ss_pred CCCEEEEecCCceEEEEecc---ccccccccccCCcceEEEEECCCC-ceEeeccccceeeccChhHhhh----------
Confidence 77777777778999999987 467899999999999999999998 6999999999999999865411
Q ss_pred ccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCC
Q psy4510 457 KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 536 (812)
Q Consensus 457 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~ 536 (812)
T Consensus 224 -------------------------------------------------------------------------------- 223 (313)
T KOG1407|consen 224 -------------------------------------------------------------------------------- 223 (313)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEE
Q psy4510 537 GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIW 616 (812)
Q Consensus 537 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iw 616 (812)
.+.+..+.-+|..+.||.+|++|++| ++|..|-|-
T Consensus 224 -------------------------------------------~R~isRldwpVRTlSFS~dg~~lASa--SEDh~IDIA 258 (313)
T KOG1407|consen 224 -------------------------------------------ERCISRLDWPVRTLSFSHDGRMLASA--SEDHFIDIA 258 (313)
T ss_pred -------------------------------------------heeeccccCceEEEEeccCcceeecc--CccceEEeE
Confidence 11222233378899999999999999 999999999
Q ss_pred eccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 617 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 617 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
+++++.+ +..+ .+.++...|||+| ...+||-+..|
T Consensus 259 ~vetGd~-------------------------~~eI-~~~~~t~tVAWHP-k~~LLAyA~dd 293 (313)
T KOG1407|consen 259 EVETGDR-------------------------VWEI-PCEGPTFTVAWHP-KRPLLAYACDD 293 (313)
T ss_pred ecccCCe-------------------------EEEe-eccCCceeEEecC-CCceeeEEecC
Confidence 9999872 3333 3678999999999 67788877765
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-26 Score=213.67 Aligned_cols=250 Identities=18% Similarity=0.233 Sum_probs=204.2
Q ss_pred CCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC--cEEEee
Q psy4510 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT--ALQTVD 242 (812)
Q Consensus 165 ~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~--~l~s~~ 242 (812)
....+.++..|.++|+|+|. ++.++|+||.|-+|+|||+.+.. ....+..|.+.|+++.|.+... .|++|+
T Consensus 32 ~l~~lF~~~aH~~sitavAV---s~~~~aSGssDetI~IYDm~k~~----qlg~ll~HagsitaL~F~~~~S~shLlS~s 104 (362)
T KOG0294|consen 32 TLKPLFAFSAHAGSITALAV---SGPYVASGSSDETIHIYDMRKRK----QLGILLSHAGSITALKFYPPLSKSHLLSGS 104 (362)
T ss_pred eeeccccccccccceeEEEe---cceeEeccCCCCcEEEEeccchh----hhcceeccccceEEEEecCCcchhheeeec
Confidence 34567777799999999995 77999999999999999999876 6778889999999999999876 999999
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.||.|.+|+... ...+.++++|.+.|+.++.+|.+ .+.++.+.|+.+++||+-.++...+. . -....
T Consensus 105 dDG~i~iw~~~~-------W~~~~slK~H~~~Vt~lsiHPS~-KLALsVg~D~~lr~WNLV~Gr~a~v~--~---L~~~a 171 (362)
T KOG0294|consen 105 DDGHIIIWRVGS-------WELLKSLKAHKGQVTDLSIHPSG-KLALSVGGDQVLRTWNLVRGRVAFVL--N---LKNKA 171 (362)
T ss_pred CCCcEEEEEcCC-------eEEeeeecccccccceeEecCCC-ceEEEEcCCceeeeehhhcCccceee--c---cCCcc
Confidence 999999999886 58899999999999999999999 78888889999999999988742221 1 12223
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+-+.|+|.|.+ |+.++. ..|-||.+.... .+..+ .....+.|+.|- ++..|++|+.++.|.+||.. ...
T Consensus 172 t~v~w~~~Gd~-F~v~~~-~~i~i~q~d~A~---v~~~i--~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~d---s~~ 240 (362)
T KOG0294|consen 172 TLVSWSPQGDH-FVVSGR-NKIDIYQLDNAS---VFREI--ENPKRILCATFL-DGSELLVGGDNEWISLKDTD---SDT 240 (362)
T ss_pred eeeEEcCCCCE-EEEEec-cEEEEEecccHh---Hhhhh--hccccceeeeec-CCceEEEecCCceEEEeccC---CCc
Confidence 44999999995 666555 578999987422 22222 223557777776 45589999999999999997 478
Q ss_pred ceEEcccCCCCEEEEEEc-cCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 403 SVATFKHHTAPVTTVEWH-PTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++..+.+|...|.++.+- .....+|+++|.||.|++||++...
T Consensus 241 ~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 241 PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred cceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 899999999999999843 2234699999999999999998874
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=215.60 Aligned_cols=260 Identities=19% Similarity=0.331 Sum_probs=214.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEEee
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~vwd 251 (812)
+|.+.|..+...= .|.+||||+.|++|+|+.+.+... ...+..|.||.++|..++|.. .|..||+++.||.|.||.
T Consensus 9 ~H~D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~-s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 9 QHEDMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQ-SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCC-ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 5888888777766 899999999999999999987653 236788999999999999987 899999999999999999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCC-EEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
-.++ .....+....|...|++++|.|.+.+ +|++++.||.|.|.+.+..+.+.. .+....|.-.|++++|.|.
T Consensus 87 e~~g-----~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t-~ki~~aH~~GvnsVswapa 160 (299)
T KOG1332|consen 87 EENG-----RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTT-SKIVFAHEIGVNSVSWAPA 160 (299)
T ss_pred cCCC-----chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccc-hhhhhccccccceeeecCc
Confidence 9887 46677788899999999999998654 489999999999999988754433 5566789999999999996
Q ss_pred ---CC----------eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC----EEEEEeCCCcEEEE
Q psy4510 331 ---EK----------RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP----LIVSGGDDGCIHVW 393 (812)
Q Consensus 331 ---~~----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~----~l~sg~~dg~i~iw 393 (812)
|. +-|++|+.|..|+||+.... .- .+.....+|...|+.++|.|.-. .||+++.||++.||
T Consensus 161 ~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~-~w-~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIw 238 (299)
T KOG1332|consen 161 SAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD-SW-KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIW 238 (299)
T ss_pred CCCccccccCcccccceeeccCCccceeeeecCCc-ch-hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEE
Confidence 31 23999999999999999864 22 22332389999999999999752 89999999999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+..........+......+.++.|++.| ++|+.++.|+.|.+|.-+..
T Consensus 239 t~~~e~e~wk~tll~~f~~~~w~vSWS~sG-n~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 239 TKDEEYEPWKKTLLEEFPDVVWRVSWSLSG-NILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred EecCccCcccccccccCCcceEEEEEeccc-cEEEEecCCcEEEEEEeCCC
Confidence 987422223333444456789999999997 79999999999999976554
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-27 Score=254.02 Aligned_cols=294 Identities=20% Similarity=0.300 Sum_probs=231.0
Q ss_pred CCceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCC--------cccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAG--------AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~--------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
...|+++..+| ++..+|||| .||.++||+...-- .....+.++..|.+.|+|+.|++||++||+|++|+
T Consensus 13 ~~~IfSIdv~p-dg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 13 EKSIFSIDVHP-DGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CeeEEEEEecC-CceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 35699999999 999999999 99999999866421 12334566788999999999999999999999999
Q ss_pred ceEEeeCCCC-----------CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc
Q psy4510 246 QLAEHNKKRG-----------KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP 314 (812)
Q Consensus 246 ~i~vwd~~~~-----------~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 314 (812)
.|.||..... .......+.+.++.+|...|..++|+|++ .+|++++.|++|.||+..+.. ....
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsViiwn~~tF~----~~~v 166 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVIIWNAKTFE----LLKV 166 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCc-cEEEEecccceEEEEccccce----eeee
Confidence 9999998831 11112346778899999999999999998 899999999999999999886 7888
Q ss_pred ccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-----CcCCCCeEEEEEcCCCCEEEEEeC---
Q psy4510 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-----NAHTSDVNVISWNRTEPLIVSGGD--- 386 (812)
Q Consensus 315 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~sg~~--- 386 (812)
+.+|.+.|-.+.|.|-|+ +||+-+.|++|+||.+.. ....+.+. ..-...+..++|+|+|++|++...
T Consensus 167 l~~H~s~VKGvs~DP~Gk-y~ASqsdDrtikvwrt~d---w~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGK-YFASQSDDRTLKVWRTSD---WGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNG 242 (942)
T ss_pred eecccccccceEECCccC-eeeeecCCceEEEEEccc---ceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccC
Confidence 999999999999999999 699999999999999763 22222221 112345788999999999998643
Q ss_pred -CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC--------C----C----cEEEEEECCCCEEEEEcCCCCchhH
Q psy4510 387 -DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT--------E----S----STFASGGADDQIALWDLAVERDSEI 449 (812)
Q Consensus 387 -dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~--------~----~----~~l~s~~~dg~v~iwd~~~~~~~~~ 449 (812)
-..+.|.+-. ..+.-..|-+|.+++..+.|+|. | . .++|+|+.|++|.||.....+.
T Consensus 243 ~~~~~~IieR~---tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RP--- 316 (942)
T KOG0973|consen 243 GKSTIAIIERG---TWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRP--- 316 (942)
T ss_pred CcceeEEEecC---CceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCc---
Confidence 3467787765 44556788899999999999983 1 1 1788999999999999976642
Q ss_pred HHhhhhhccCCCceEEe-ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 450 EQREAELKDLPSQLLFI-HLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 450 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
+... +-....|.+++|+|++-.+++.+-++.+.++.
T Consensus 317 -------------l~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~ 353 (942)
T KOG0973|consen 317 -------------LFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIH 353 (942)
T ss_pred -------------hhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence 2222 23355899999999996555554444455543
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-24 Score=222.71 Aligned_cols=457 Identities=13% Similarity=0.089 Sum_probs=303.0
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
...+|++|||+...+.||.+-.+|.|-+|++... .-....+.|+. ..|.+|+|++. ++|++.+.+|.|.-|
T Consensus 24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~------w~~~~vi~g~~drsIE~L~W~e~--~RLFS~g~sg~i~Ew 95 (691)
T KOG2048|consen 24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN------WFLEPVIHGPEDRSIESLAWAEG--GRLFSSGLSGSITEW 95 (691)
T ss_pred eccceEEEEEeccCCceeeeccCCcEEEEccCCC------ceeeEEEecCCCCceeeEEEccC--CeEEeecCCceEEEE
Confidence 3467999999999999999999999999999884 34455566655 57999999954 689999999999999
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
|+.+.+ ....+....+.|++++.+|.+. .++.|+.||.+..++..... -.......-..+.|.+++|+|++..
T Consensus 96 Dl~~lk----~~~~~d~~gg~IWsiai~p~~~-~l~IgcddGvl~~~s~~p~~--I~~~r~l~rq~sRvLslsw~~~~~~ 168 (691)
T KOG2048|consen 96 DLHTLK----QKYNIDSNGGAIWSIAINPENT-ILAIGCDDGVLYDFSIGPDK--ITYKRSLMRQKSRVLSLSWNPTGTK 168 (691)
T ss_pred ecccCc----eeEEecCCCcceeEEEeCCccc-eEEeecCCceEEEEecCCce--EEEEeecccccceEEEEEecCCccE
Confidence 999987 5666677788999999999998 69999999977777776321 1112222445689999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEc-----cc---CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATF-----KH---HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~-----~~---h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+++|+.||.|++||... +..++.. .. ..--|.++.|-.+ ..|++|..-|+|.+||...+..
T Consensus 169 i~~Gs~Dg~Iriwd~~~---~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd--~tI~sgDS~G~V~FWd~~~gTL------ 237 (691)
T KOG2048|consen 169 IAGGSIDGVIRIWDVKS---GQTLHIITMQLDRLSKREPTIVWSVLFLRD--STIASGDSAGTVTFWDSIFGTL------ 237 (691)
T ss_pred EEecccCceEEEEEcCC---CceEEEeeecccccccCCceEEEEEEEeec--CcEEEecCCceEEEEcccCcch------
Confidence 99999999999999984 4444411 11 2234778888765 4899999999999999988842
Q ss_pred hhhhccCCCceEEee-cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc--ccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 453 EAELKDLPSQLLFIH-LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS--QLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
...+ .+...|.+++..++...++.++.+..+..|........ .......+...+.+++..++ .
T Consensus 238 -----------iqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~---~ 303 (691)
T KOG2048|consen 238 -----------IQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN---A 303 (691)
T ss_pred -----------hhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc---e
Confidence 2222 23457999999999888888888877777765554331 01111223457888888876 3
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
+++.+.+....+....-... .+.. ..... .-.+.....-.++|+.- =.
T Consensus 304 l~sgG~d~~l~i~~s~~~~~-------------------------~~h~-~~~~~----p~~~~v~~a~~~~L~~~--w~ 351 (691)
T KOG2048|consen 304 LISGGRDFTLAICSSREFKN-------------------------MDHR-QKNLF----PASDRVSVAPENRLLVL--WK 351 (691)
T ss_pred EEecceeeEEEEccccccCc-------------------------hhhh-ccccc----cccceeecCccceEEEE--ec
Confidence 44433332111111100000 0000 00000 11111111222233332 24
Q ss_pred cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 610 VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 610 dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
...+.+|.+.+...+- ......+++-...-..-|.+.+.|| +|++||.+.- ..++|+.+...
T Consensus 352 ~h~v~lwrlGS~~~~g----------------~~~~~~Llkl~~k~~~nIs~~aiSP-dg~~Ia~st~-~~~~iy~L~~~ 413 (691)
T KOG2048|consen 352 AHGVDLWRLGSVILQG----------------EYNYIHLLKLFTKEKENISCAAISP-DGNLIAISTV-SRTKIYRLQPD 413 (691)
T ss_pred cccccceeccCccccc----------------ccChhhheeeecCCccceeeeccCC-CCCEEEEeec-cceEEEEeccC
Confidence 6677777776653110 0001113333333445799999999 8888887763 35666666541
Q ss_pred c---------------eeEEEEecCCCCEEEeec-CCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEe
Q psy4510 690 G---------------AWSVYLYTNRFGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 690 ~---------------~~~~~~~s~dg~~lasgs-~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s 753 (812)
. ..+...|+-|+..++..+ ....+.+.+..+.......-..-++-...|..|..||+|+ |||.
T Consensus 414 ~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~-yiaa 492 (691)
T KOG2048|consen 414 PNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGN-YIAA 492 (691)
T ss_pred cceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCC-EEEE
Confidence 1 123345677777766666 7788888887765421101111124456899999999999 8999
Q ss_pred eccCCceEEeeecCcc
Q psy4510 754 CSVDRSNRIGARRDML 769 (812)
Q Consensus 754 ~s~Dg~i~iWd~~~~~ 769 (812)
.+.+|.|.+|+++..+
T Consensus 493 ~~t~g~I~v~nl~~~~ 508 (691)
T KOG2048|consen 493 ISTRGQIFVYNLETLE 508 (691)
T ss_pred EeccceEEEEEcccce
Confidence 9999999999999887
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-26 Score=211.45 Aligned_cols=282 Identities=12% Similarity=0.209 Sum_probs=227.0
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC--CCceEEeeC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD--PFQLAEHNK 252 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~--d~~i~vwd~ 252 (812)
-.++|.++.|++ +|.+|++++.|.+++|||..++. .++++..++..|..++|......++.++. |.+||.-++
T Consensus 13 ~~~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~----~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl 87 (311)
T KOG1446|consen 13 TNGKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGK----QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSL 87 (311)
T ss_pred CCCceeEEEecC-CCCEEEEecCCCeEEEEEcCCCc----eeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEe
Confidence 467899999999 99999999999999999999988 78888899999999999988888887775 889999999
Q ss_pred CCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 253 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
.+. +.++.|.||...|.+|+.+|-+ ..+++++.|++|++||++..+. +..+. ...-..++|.|.|-
T Consensus 88 ~dN-------kylRYF~GH~~~V~sL~~sP~~-d~FlS~S~D~tvrLWDlR~~~c----qg~l~--~~~~pi~AfDp~GL 153 (311)
T KOG1446|consen 88 HDN-------KYLRYFPGHKKRVNSLSVSPKD-DTFLSSSLDKTVRLWDLRVKKC----QGLLN--LSGRPIAAFDPEGL 153 (311)
T ss_pred ecC-------ceEEEcCCCCceEEEEEecCCC-CeEEecccCCeEEeeEecCCCC----ceEEe--cCCCcceeECCCCc
Confidence 884 8999999999999999999998 8999999999999999997762 32222 22334678999997
Q ss_pred eEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~ 411 (812)
+||++.....|++||+|.-..+. ....+...-....+.|.|+|+|++|+.++..+.+++.|.- .+..+.++..+.
T Consensus 154 -ifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf---~G~~~~tfs~~~ 229 (311)
T KOG1446|consen 154 -IFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAF---DGTVKSTFSGYP 229 (311)
T ss_pred -EEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEcc---CCcEeeeEeecc
Confidence 68888877799999999754332 2233323456788999999999999999999999999987 567777777764
Q ss_pred CCE---EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec-CCCceeEEEEcCCCCCEEE
Q psy4510 412 APV---TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL-GQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 412 ~~v---~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~~~ 487 (812)
..- .+..|.|++ +++++|+.||+|.+|+++++.. ...... ...++.++.|+|. ..+.
T Consensus 230 ~~~~~~~~a~ftPds-~Fvl~gs~dg~i~vw~~~tg~~----------------v~~~~~~~~~~~~~~~fnP~--~~mf 290 (311)
T KOG1446|consen 230 NAGNLPLSATFTPDS-KFVLSGSDDGTIHVWNLETGKK----------------VAVLRGPNGGPVSCVRFNPR--YAMF 290 (311)
T ss_pred CCCCcceeEEECCCC-cEEEEecCCCcEEEEEcCCCcE----------------eeEecCCCCCCccccccCCc--eeee
Confidence 432 577899996 6999999999999999988742 222222 3457888899997 5555
Q ss_pred EEeCCCeEEEE
Q psy4510 488 STANSGFNIFR 498 (812)
Q Consensus 488 ~~~~~~~~~~~ 498 (812)
+++...+.+|-
T Consensus 291 ~sa~s~l~fw~ 301 (311)
T KOG1446|consen 291 VSASSNLVFWL 301 (311)
T ss_pred eecCceEEEEe
Confidence 55555555553
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-26 Score=246.93 Aligned_cols=256 Identities=16% Similarity=0.245 Sum_probs=191.0
Q ss_pred ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCceEEeeCCCCCC-CCCCCCCceEEcCCC
Q psy4510 195 GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKG-PGIPTPPLFSFSGHL 272 (812)
Q Consensus 195 ~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~h~ 272 (812)
||.++.|++|+..... ....+.+|..+|.+++|+|+ +.+|++|+.|+.|+||++.++.. ......++..+.+|.
T Consensus 50 GG~~gvI~L~~~~r~~----~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~ 125 (568)
T PTZ00420 50 GGLIGAIRLENQMRKP----PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHK 125 (568)
T ss_pred CCceeEEEeeecCCCc----eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCC
Confidence 6778899999877643 56778999999999999997 78999999999999999976421 000123566789999
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..|.+++|+|++..+|++|+.|++|+|||+.++. ....+. |...|.+++|+|+|. +|++++.|+.|+|||++++
T Consensus 126 ~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~----~~~~i~-~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 126 KKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK----RAFQIN-MPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred CcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc----EEEEEe-cCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCC
Confidence 9999999999986677899999999999999876 233333 567899999999999 6899999999999999953
Q ss_pred CcccceeecCCcCCCCeEEE-----EEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceEEccc--CCCCEEEEEEcc
Q psy4510 353 NTKSCMLTLPNAHTSDVNVI-----SWNRTEPLIVSGGDDG----CIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHP 421 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l-----~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p 421 (812)
..+..+ .+|.+.+.+. .|++++.+|++++.++ .|+|||+++ ...++..+.. +.+.+... |.+
T Consensus 200 ---~~i~tl-~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~--~~~pl~~~~ld~~~~~L~p~-~D~ 272 (568)
T PTZ00420 200 ---EIASSF-HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN--TTSALVTMSIDNASAPLIPH-YDE 272 (568)
T ss_pred ---cEEEEE-ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC--CCCceEEEEecCCccceEEe-eeC
Confidence 345555 6787765433 3457888888888774 799999996 3445555433 33333333 444
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
+.+.++++|+.|+.|++|++..... ..+.......++..++|.|..
T Consensus 273 ~tg~l~lsGkGD~tIr~~e~~~~~~---------------~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 273 STGLIYLIGKGDGNCRYYQHSLGSI---------------RKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred CCCCEEEEEECCCeEEEEEccCCcE---------------EeecccccCCCccceEEcccc
Confidence 4457899999999999999976521 112222233467788888863
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=249.88 Aligned_cols=293 Identities=16% Similarity=0.239 Sum_probs=200.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc------CCCCCCeeeeeEcC---CCC--cEEEee
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL------GGHTNSAEDLQWSD---LKT--ALQTVD 242 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l------~~h~~~V~~l~~s~---~~~--~l~s~~ 242 (812)
.|.+.|+++.||+ +|++|||||.||.|+||.+...+........+ ..-...+..+..++ .++ ..-.+.
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 6999999999999 99999999999999999887643210000000 00000011111111 001 111111
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.... .+.... ...+..+|+..+.||.+.|..|.||.+ ++|++++.|.+|++|++.... ++..|. |...|
T Consensus 344 ~s~~-~~~p~~---~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~----CL~~F~-HndfV 412 (712)
T KOG0283|consen 344 QSPC-VLLPLK---AFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKE----CLKVFS-HNDFV 412 (712)
T ss_pred CCcc-ccCCCc---cccccccchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcc----eeeEEe-cCCee
Confidence 1111 111111 122345899999999999999999998 699999999999999999876 555555 99999
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+|++|+|-..++|++|+-||.||||++.. ..+... ..-..-|++++|.|+|+..+.|+.+|.+++|+.+..+
T Consensus 413 TcVaFnPvDDryFiSGSLD~KvRiWsI~d----~~Vv~W-~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk--- 484 (712)
T KOG0283|consen 413 TCVAFNPVDDRYFISGSLDGKVRLWSISD----KKVVDW-NDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLK--- 484 (712)
T ss_pred EEEEecccCCCcEeecccccceEEeecCc----CeeEee-hhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCe---
Confidence 99999998888999999999999999963 223333 3344789999999999999999999999999998532
Q ss_pred ceEEcc---------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 403 SVATFK---------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 403 ~~~~~~---------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
....+. .|. .|++++|.|.....+++.+.|.+|+|+|++..... ..+..+.....-
T Consensus 485 ~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv--------------~KfKG~~n~~SQ 549 (712)
T KOG0283|consen 485 LVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLV--------------HKFKGFRNTSSQ 549 (712)
T ss_pred EEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhh--------------hhhcccccCCcc
Confidence 222211 123 79999999987777888899999999999665321 111111112233
Q ss_pred eEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 474 KELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
....|..++..++.++.+..+.+|+...
T Consensus 550 ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 550 ISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred eeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 4567888876555555444566666533
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-27 Score=230.02 Aligned_cols=287 Identities=21% Similarity=0.298 Sum_probs=233.5
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
+....+.|++++|+|...+=.+....-.+.+|+..+. .+..++..-...+++++|..|| .+||+|+..|.|+
T Consensus 22 ~~ke~~~vssl~fsp~~P~d~aVt~S~rvqly~~~~~-------~~~k~~srFk~~v~s~~fR~DG-~LlaaGD~sG~V~ 93 (487)
T KOG0310|consen 22 VHKEHNSVSSLCFSPKHPYDFAVTSSVRVQLYSSVTR-------SVRKTFSRFKDVVYSVDFRSDG-RLLAAGDESGHVK 93 (487)
T ss_pred cccccCcceeEecCCCCCCceEEecccEEEEEecchh-------hhhhhHHhhccceeEEEeecCC-eEEEccCCcCcEE
Confidence 3344578999999998876555555677899998874 5666666677899999999999 8999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
|+|+.+.. ..+.+.+|+.+|..+.|+|.+..+|++|++|+.+++||+.+.. ....+ .+|...|.|.+|+|..
T Consensus 94 vfD~k~r~----iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~---v~~~l-~~htDYVR~g~~~~~~ 165 (487)
T KOG0310|consen 94 VFDMKSRV----ILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY---VQAEL-SGHTDYVRCGDISPAN 165 (487)
T ss_pred EeccccHH----HHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE---EEEEe-cCCcceeEeeccccCC
Confidence 99966533 6788999999999999999999999999999999999998533 23344 8999999999999976
Q ss_pred C-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 379 P-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
. +++|||.||.|++||+|. ....+..+. |..+|.++.+-|.| .++++++. ..|++||+.++..
T Consensus 166 ~hivvtGsYDg~vrl~DtR~--~~~~v~eln-hg~pVe~vl~lpsg-s~iasAgG-n~vkVWDl~~G~q----------- 229 (487)
T KOG0310|consen 166 DHIVVTGSYDGKVRLWDTRS--LTSRVVELN-HGCPVESVLALPSG-SLIASAGG-NSVKVWDLTTGGQ----------- 229 (487)
T ss_pred CeEEEecCCCceEEEEEecc--CCceeEEec-CCCceeeEEEcCCC-CEEEEcCC-CeEEEEEecCCce-----------
Confidence 5 999999999999999996 235555554 99999999999987 58888875 5799999986621
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
+
T Consensus 230 -----l-------------------------------------------------------------------------- 230 (487)
T KOG0310|consen 230 -----L-------------------------------------------------------------------------- 230 (487)
T ss_pred -----e--------------------------------------------------------------------------
Confidence 0
Q ss_pred ceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEe
Q psy4510 538 FNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWD 617 (812)
Q Consensus 538 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd 617 (812)
......|...|+|+++..++.+|+++ +-|+.|++||
T Consensus 231 ------------------------------------------l~~~~~H~KtVTcL~l~s~~~rLlS~--sLD~~VKVfd 266 (487)
T KOG0310|consen 231 ------------------------------------------LTSMFNHNKTVTCLRLASDSTRLLSG--SLDRHVKVFD 266 (487)
T ss_pred ------------------------------------------hhhhhcccceEEEEEeecCCceEeec--ccccceEEEE
Confidence 00122366789999999999999999 8999999999
Q ss_pred ccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 618 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
+.+.+ .+..+ .-.++|.+++.+| +++.++.|..+|.+.+=+..
T Consensus 267 ~t~~K-------------------------vv~s~-~~~~pvLsiavs~-dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 267 TTNYK-------------------------VVHSW-KYPGPVLSIAVSP-DDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred ccceE-------------------------EEEee-ecccceeeEEecC-CCceEEEecccceeeeehhh
Confidence 77665 34333 3568999999999 78899999999988776443
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-26 Score=212.20 Aligned_cols=281 Identities=15% Similarity=0.207 Sum_probs=220.6
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
-.+.|.+++|||+...+++.|+-||+||+|+++..... ..+....|.++|.+++|+.+|..+++|+.|+.+++||+.+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~--~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL--VPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcc--cchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence 35779999999988888889999999999999875322 3367788999999999999999999999999999999998
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCC-CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
..+..+..|.++|.++.|-+... ..|+||+.|++|+.||.+... ....+. -...++++..- ..
T Consensus 104 --------~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~----pv~t~~-LPeRvYa~Dv~--~p- 167 (347)
T KOG0647|consen 104 --------GQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN----PVATLQ-LPERVYAADVL--YP- 167 (347)
T ss_pred --------CCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC----eeeeee-ccceeeehhcc--Cc-
Confidence 35677888999999999987652 379999999999999999765 222222 33456666543 22
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC-
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA- 412 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~- 412 (812)
+++.+..++.|.+|+++.+... .......-.-.+.|++..++....+.|+-.|.+.|..+..... ..-.+|+.|..
T Consensus 168 m~vVata~r~i~vynL~n~~te--~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~-~~nFtFkCHR~~ 244 (347)
T KOG0647|consen 168 MAVVATAERHIAVYNLENPPTE--FKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP-KDNFTFKCHRST 244 (347)
T ss_pred eeEEEecCCcEEEEEcCCCcch--hhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc-cCceeEEEeccC
Confidence 7888999999999999854332 2222233455689999999988889999999999999875322 44566777763
Q ss_pred --------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 413 --------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 413 --------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
.|.+|+|+|.. ..|+++|.||++.+||-.... .+........+|++..|+.++..
T Consensus 245 ~~~~~~VYaVNsi~FhP~h-gtlvTaGsDGtf~FWDkdar~----------------kLk~s~~~~qpItcc~fn~~G~i 307 (347)
T KOG0647|consen 245 NSVNDDVYAVNSIAFHPVH-GTLVTAGSDGTFSFWDKDART----------------KLKTSETHPQPITCCSFNRNGSI 307 (347)
T ss_pred CCCCCceEEecceEeeccc-ceEEEecCCceEEEecchhhh----------------hhhccCcCCCccceeEecCCCCE
Confidence 47889999986 589999999999999977653 33333455668999999999987
Q ss_pred EEEEEeCCC
Q psy4510 485 TIISTANSG 493 (812)
Q Consensus 485 ~~~~~~~~~ 493 (812)
+..+.+.|=
T Consensus 308 faYA~gYDW 316 (347)
T KOG0647|consen 308 FAYALGYDW 316 (347)
T ss_pred EEEEeeccc
Confidence 777777653
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-28 Score=217.01 Aligned_cols=251 Identities=18% Similarity=0.327 Sum_probs=215.3
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.-|.+|.||.+.|+.+..+. +..+.|+++.|-+-+|||.-++.. + ....|+.-|.+++|+.|.++|++|+.+..
T Consensus 50 dwigtfeghkgavw~~~l~~-na~~aasaaadftakvw~a~tgde----l-hsf~hkhivk~~af~~ds~~lltgg~ekl 123 (334)
T KOG0278|consen 50 DWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAKVWDAVTGDE----L-HSFEHKHIVKAVAFSQDSNYLLTGGQEKL 123 (334)
T ss_pred CcEEeeeccCcceeeeecCc-hhhhhhhhcccchhhhhhhhhhhh----h-hhhhhhheeeeEEecccchhhhccchHHH
Confidence 45788889999999999998 999999999999999999888762 2 23468889999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
+||+|++.. ..|...+.+|.+.|..+-|+... ..+++++.|++|++||.+++. ..+.+. ...+|+++.
T Consensus 124 lrvfdln~p------~App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRLWD~rTgt----~v~sL~-~~s~VtSlE 191 (334)
T KOG0278|consen 124 LRVFDLNRP------KAPPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRLWDHRTGT----EVQSLE-FNSPVTSLE 191 (334)
T ss_pred hhhhhccCC------CCCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEEEEeccCc----EEEEEe-cCCCCccee
Confidence 999999984 57888899999999999999887 788888999999999999987 333333 456899999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
.+++|. +++....+.|.+||..+ ...+..+ .-...|.+.+.+|+...+++|+.|+.++.||.. ++..+..
T Consensus 192 vs~dG~--ilTia~gssV~Fwdaks---f~~lKs~--k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~---TgeEi~~ 261 (334)
T KOG0278|consen 192 VSQDGR--ILTIAYGSSVKFWDAKS---FGLLKSY--KMPCNVESASLHPKKEFFVAGGEDFKVYKFDYN---TGEEIGS 261 (334)
T ss_pred eccCCC--EEEEecCceeEEecccc---ccceeec--cCccccccccccCCCceEEecCcceEEEEEecc---CCceeee
Confidence 999998 56666778999999984 3334443 335678999999999999999999999999998 5777777
Q ss_pred c-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 407 F-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 407 ~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
+ ++|-++|.++.|+|+| .+.++|+.||+|++|.+...+.
T Consensus 262 ~nkgh~gpVhcVrFSPdG-E~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 262 YNKGHFGPVHCVRFSPDG-ELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred cccCCCCceEEEEECCCC-ceeeccCCCceEEEEEecCCCc
Confidence 6 8999999999999998 4889999999999999887753
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=229.05 Aligned_cols=291 Identities=21% Similarity=0.291 Sum_probs=237.4
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+..|.+.|..+.|-++...|++|+.|..|++|++... ....+.++.|-.+.|.+++|.+++ ..+++++.|
T Consensus 167 ~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~-----k~~~~~tLaGs~g~it~~d~d~~~-~~~iAas~d 240 (459)
T KOG0288|consen 167 ALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGE-----KSELISTLAGSLGNITSIDFDSDN-KHVIAASND 240 (459)
T ss_pred hhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccc-----hhhhhhhhhccCCCcceeeecCCC-ceEEeecCC
Confidence 44567789999999999999999999999999999999875 345778889989999999999998 788888899
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.+++|++.... ...++.+|++.|+++.|...... +++|+.|.+|++||+. ...|..++.. ...++.|..
T Consensus 241 ~~~r~Wnvd~~r----~~~TLsGHtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~---k~~C~kt~l~--~S~cnDI~~ 310 (459)
T KOG0288|consen 241 KNLRLWNVDSLR----LRHTLSGHTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQ---KAYCSKTVLP--GSQCNDIVC 310 (459)
T ss_pred Cceeeeeccchh----hhhhhcccccceeeehhhccccc-eeeccccchhhhhhhh---hhheeccccc--cccccceEe
Confidence 999999999987 78899999999999999988774 9999999999999998 4666666532 344556665
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+ ...+++|..|+.|++||.| ...++.....+. .|+++..++++ ..|.+++.|.++.+.|+++..
T Consensus 311 ~--~~~~~SgH~DkkvRfwD~R---s~~~~~sv~~gg-~vtSl~ls~~g-~~lLsssRDdtl~viDlRt~e--------- 374 (459)
T KOG0288|consen 311 S--ISDVISGHFDKKVRFWDIR---SADKTRSVPLGG-RVTSLDLSMDG-LELLSSSRDDTLKVIDLRTKE--------- 374 (459)
T ss_pred c--ceeeeecccccceEEEecc---CCceeeEeecCc-ceeeEeeccCC-eEEeeecCCCceeeeeccccc---------
Confidence 5 5579999999999999999 466777777665 89999999987 577777999999999998772
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+.... + .. +.
T Consensus 375 --------I~~~~-----------s--------------------------------------------A~--g~----- 384 (459)
T KOG0288|consen 375 --------IRQTF-----------S--------------------------------------------AE--GF----- 384 (459)
T ss_pred --------EEEEe-----------e--------------------------------------------cc--cc-----
Confidence 11000 0 00 00
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
..+ ...+.+.|||++.|+++| |.||.|+
T Consensus 385 ------------------------------------------------k~a--sDwtrvvfSpd~~YvaAG--S~dgsv~ 412 (459)
T KOG0288|consen 385 ------------------------------------------------KCA--SDWTRVVFSPDGSYVAAG--SADGSVY 412 (459)
T ss_pred ------------------------------------------------ccc--cccceeEECCCCceeeec--cCCCcEE
Confidence 000 135678999999999999 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC--ceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT--EGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~--~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
||++.+++ +...+..... .|++++|+| .|..|++++.++.+.+|.
T Consensus 413 iW~v~tgK-------------------------lE~~l~~s~s~~aI~s~~W~~-sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 413 IWSVFTGK-------------------------LEKVLSLSTSNAAITSLSWNP-SGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEEccCce-------------------------EEEEeccCCCCcceEEEEEcC-CCchhhcccCCcceEecC
Confidence 99999987 4555554443 599999999 888999999999999994
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=240.61 Aligned_cols=242 Identities=24% Similarity=0.456 Sum_probs=211.0
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC-CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG-HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
.+.|+++.|++ +|.+||+|..+|.|.|||..+.+ ....+.+ |...|.+++|. +..+.+|+.++.|..+|+..
T Consensus 217 ~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k----~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~ 289 (484)
T KOG0305|consen 217 EELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQK----KTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRI 289 (484)
T ss_pred CCceEEEEECC-CCCEEEEeecCCeEEEEehhhcc----ccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEec
Confidence 78899999999 99999999999999999998877 5666777 99999999999 77899999999999999998
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
. .....++.+|..+|..++|++++ .+||+|+.|+.+.|||..... ....+..|...|.+++|+|-...+
T Consensus 290 ~------~~~~~~~~~H~qeVCgLkws~d~-~~lASGgnDN~~~Iwd~~~~~----p~~~~~~H~aAVKA~awcP~q~~l 358 (484)
T KOG0305|consen 290 S------QHVVSTLQGHRQEVCGLKWSPDG-NQLASGGNDNVVFIWDGLSPE----PKFTFTEHTAAVKALAWCPWQSGL 358 (484)
T ss_pred c------hhhhhhhhcccceeeeeEECCCC-CeeccCCCccceEeccCCCcc----ccEEEeccceeeeEeeeCCCccCc
Confidence 5 23333589999999999999999 899999999999999996655 677889999999999999999889
Q ss_pred EEEEE--CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE--EeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 335 LASCS--VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS--GGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 335 l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s--g~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
||+|+ .|+.|++||+.+ ...+..+ ...+.|.+|.|++..+-|++ |..++.|.||+.. +...+..+.+|
T Consensus 359 LAsGGGs~D~~i~fwn~~~---g~~i~~v--dtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~p---s~~~~~~l~gH 430 (484)
T KOG0305|consen 359 LATGGGSADRCIKFWNTNT---GARIDSV--DTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYP---SMKLVAELLGH 430 (484)
T ss_pred eEEcCCCcccEEEEEEcCC---CcEeccc--ccCCceeeEEEcCCCCEEEEecCCCCCcEEEEecc---ccceeeeecCC
Confidence 99975 599999999984 4444444 45678999999999874443 4457889999998 46788999999
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
...|..++++|++ ..+++|+.|.++++|++-..
T Consensus 431 ~~RVl~la~SPdg-~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 431 TSRVLYLALSPDG-ETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred cceeEEEEECCCC-CEEEEecccCcEEeccccCC
Confidence 9999999999997 59999999999999998765
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-26 Score=206.78 Aligned_cols=301 Identities=15% Similarity=0.172 Sum_probs=227.4
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
|... ||..+++-+.|+. +|++|.+++.|.++.+|-.-+++ .+-++.||++.|.|+..+.+.++|++|+.|.+++
T Consensus 4 i~l~-GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGe----rlGty~GHtGavW~~Did~~s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 4 ILLQ-GHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGE----RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAK 77 (327)
T ss_pred cccc-cCccccceEEecC-CCcEEEEecCCCCceEEEecCCc----eeeeecCCCceEEEEEecCCcceeeeccccceeE
Confidence 4444 9999999999999 99999999999999999877777 7889999999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE----eCCCcEEEEeCCCCCc---ceeccccccCCCCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG----DCKRNIHIWTPREAGA---WQVDQKPLVGHTNS 321 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg----~~dg~i~vwd~~~~~~---~~~~~~~~~~h~~~ 321 (812)
+||+++| +.+.+++. ...|..+.|++.+...+++. +..+.|.++|++.... ...+...+..+.+.
T Consensus 78 LWDv~tG-------k~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~sk 149 (327)
T KOG0643|consen 78 LWDVETG-------KQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSK 149 (327)
T ss_pred EEEcCCC-------cEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccc
Confidence 9999997 77777764 57899999999984334443 2357899999985432 11134455667899
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
++.+-|.|-++ .|++|..||.|.+||++++. .+......|...|+.|.++++..++++|+.|.+-++||.+. -
T Consensus 150 it~a~Wg~l~~-~ii~Ghe~G~is~~da~~g~---~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t---l 222 (327)
T KOG0643|consen 150 ITSALWGPLGE-TIIAGHEDGSISIYDARTGK---ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT---L 222 (327)
T ss_pred eeeeeecccCC-EEEEecCCCcEEEEEcccCc---eeeechhhhccccccccccCCcceEEecccCccceeeeccc---e
Confidence 99999999999 59999999999999999543 23333377999999999999999999999999999999984 4
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCCC-EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ-IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 480 (812)
..++++. -..||++.+++|....+++.||.+.. |.-=..+.++-... .... -...++-....+-++|++++|||
T Consensus 223 ~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEAr--Fyh~--i~eEEigrvkGHFGPINsvAfhP 297 (327)
T KOG0643|consen 223 EVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEAR--FYHL--IFEEEIGRVKGHFGPINSVAFHP 297 (327)
T ss_pred eeEEEee-ecccccceecccccceEEecCCceeeeeeeecccccchhhh--HHHH--HHHHHhccccccccCcceeEECC
Confidence 5566665 46799999999987655555554421 22112222211100 0000 00012333445557999999999
Q ss_pred CCCCEEEEEeCCCeEE
Q psy4510 481 QLPGTIISTANSGFNI 496 (812)
Q Consensus 481 ~~~~~~~~~~~~~~~~ 496 (812)
++. ..++++.+|...
T Consensus 298 dGk-sYsSGGEDG~VR 312 (327)
T KOG0643|consen 298 DGK-SYSSGGEDGYVR 312 (327)
T ss_pred CCc-ccccCCCCceEE
Confidence 985 667777777543
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=224.94 Aligned_cols=216 Identities=19% Similarity=0.264 Sum_probs=164.1
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccc--ccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ--VDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~--~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
.+.|.++.+|.+.|+.+.|+|....+||||+.|..|+||.+..+-... .....+.+..-.|.++.|+|...-|+..+.
T Consensus 69 ~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a 148 (1012)
T KOG1445|consen 69 TRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGA 148 (1012)
T ss_pred ccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEecc
Confidence 357888889999999999999888899999999999999998442211 122234444557889999999888888888
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-CE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN-SV 322 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~v 322 (812)
.|.++|||+.++ +++..+.+|...|.++.|+.+| .+|++++.|+.|+|||.+.... .++...+|.+ .=
T Consensus 149 ~g~v~i~D~stq-------k~~~el~~h~d~vQSa~WseDG-~llatscKdkqirifDPRa~~~---piQ~te~H~~~rd 217 (1012)
T KOG1445|consen 149 HGSVYITDISTQ-------KTAVELSGHTDKVQSADWSEDG-KLLATSCKDKQIRIFDPRASME---PIQTTEGHGGMRD 217 (1012)
T ss_pred CceEEEEEcccC-------ceeecccCCchhhhccccccCC-ceEeeecCCcceEEeCCccCCC---ccccccccccchh
Confidence 999999999985 8899999999999999999999 8999999999999999987654 4555577775 33
Q ss_pred EEEEEcCCCCeEEEEEECC----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEec
Q psy4510 323 EDLQWSPGEKRVLASCSVD----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL-IVSGGDDGCIHVWDL 395 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~sg~~dg~i~iwd~ 395 (812)
..+.|.-+-.+ |++.+.+ ..|++||++.-... +.++.-.....|.---|.|+.++ +++|-.+..|..+.+
T Consensus 218 sRv~w~Gn~~r-lisTGF~~~R~reV~~~Dtr~f~~p--~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~ 292 (1012)
T KOG1445|consen 218 SRVLWAGNWER-LISTGFTTKRIREVRAYDTRKFGAP--VHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEM 292 (1012)
T ss_pred heeeeccchhh-hhhcccchhhheeeeeeeccccCCc--ceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEe
Confidence 45777766555 4454443 57899999864433 33433345556777778888874 445555666666665
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=249.02 Aligned_cols=317 Identities=21% Similarity=0.263 Sum_probs=230.8
Q ss_pred CCCcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCc--------ceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 271 HLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGA--------WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 271 h~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~--------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+...|++++.+|++ ..++||+ .||.++||+...-.. .......+..|.+.|+|+.|+|+|+ +||+|++
T Consensus 12 ~~~~IfSIdv~pdg-~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~-~lAsGSD 89 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDG-VKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS-YLASGSD 89 (942)
T ss_pred CCeeEEEEEecCCc-eeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC-eEeeccC
Confidence 34569999999999 8999999 899999998653210 1123455677999999999999999 5999999
Q ss_pred CCeEEEEECCCC---------------CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 341 DLSIRIWDTRVI---------------NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 341 dg~i~iwd~~~~---------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
|+.|.||..... ...+++..+ .+|...|..++|+|++.+|++++.|++|.||+.+++ ..+.
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l-~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF---~~~~ 165 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL-RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF---ELLK 165 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEE-ecCCCccceeccCCCccEEEEecccceEEEEccccc---eeee
Confidence 999999998720 011244455 789999999999999999999999999999999963 6789
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
.+.+|.+.|..+.|.|-| ++||+-+.|++|++|++..... ... |
T Consensus 166 vl~~H~s~VKGvs~DP~G-ky~ASqsdDrtikvwrt~dw~i-----------------~k~------I------------ 209 (942)
T KOG0973|consen 166 VLRGHQSLVKGVSWDPIG-KYFASQSDDRTLKVWRTSDWGI-----------------EKS------I------------ 209 (942)
T ss_pred eeecccccccceEECCcc-CeeeeecCCceEEEEEccccee-----------------eEe------e------------
Confidence 999999999999999998 6999999999999999655311 000 0
Q ss_pred EEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccC
Q psy4510 486 IISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDES 565 (812)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 565 (812)
+.. |
T Consensus 210 ---------------t~p------------------f------------------------------------------- 213 (942)
T KOG0973|consen 210 ---------------TKP------------------F------------------------------------------- 213 (942)
T ss_pred ---------------ccc------------------h-------------------------------------------
Confidence 000 0
Q ss_pred CCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEee--cCcceEEEEeccccccccCCcccccccccccCCCCC
Q psy4510 566 EGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW--GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPG 643 (812)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~--~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (812)
.-.+......++.|||||++|+++-+ +.-.++.|.+-.+-+
T Consensus 214 ----------------~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk--------------------- 256 (942)
T KOG0973|consen 214 ----------------EESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWK--------------------- 256 (942)
T ss_pred ----------------hhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCce---------------------
Confidence 00001124556777788887776521 122345555554433
Q ss_pred CCCCCeeeecCCCCceEEEEeCCCCCCeEEecCC-CceEEEEecCCCceeEEEEecCCC--CEEEeecCCCeEEEeecCC
Q psy4510 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWSVYLYTNRF--GVLATGDCKRNIHIWTPRE 720 (812)
Q Consensus 644 ~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~-Dg~v~iWd~~~~~~~~~~~~s~dg--~~lasgs~dg~i~iwd~~~ 720 (812)
.-..|-||.+++.+++|+|. |.-.-. +|+.. .++. ..+|+|+.|++|-||....
T Consensus 257 ----~~~~LvGH~~p~evvrFnP~----lfe~~~~ng~~~---------------~~~~~y~i~AvgSqDrSlSVW~T~~ 313 (942)
T KOG0973|consen 257 ----VDKDLVGHSAPVEVVRFNPK----LFERNNKNGTST---------------QPNCYYCIAAVGSQDRSLSVWNTAL 313 (942)
T ss_pred ----eeeeeecCCCceEEEEeChH----HhccccccCCcc---------------CCCcceEEEEEecCCccEEEEecCC
Confidence 45678999999999999982 111100 11110 0000 2688999999999999765
Q ss_pred CCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 721 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 721 ~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.+. +.....--..+|.+|+|||||. .|+.||.||+|.+..+....
T Consensus 314 ~RP---l~vi~~lf~~SI~DmsWspdG~-~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 314 PRP---LFVIHNLFNKSIVDMSWSPDGF-SLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred CCc---hhhhhhhhcCceeeeeEcCCCC-eEEEEecCCeEEEEEcchHH
Confidence 554 2222233346899999999999 79999999999999988776
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-25 Score=206.96 Aligned_cols=209 Identities=20% Similarity=0.263 Sum_probs=170.6
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC- 293 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~- 293 (812)
..+.+..-.+.|.++.|+++|.+|++++.|.++++||..++ +.+.++..++-.+..++|.... ..++.++.
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g-------~~~~ti~skkyG~~~~~Fth~~-~~~i~sStk 77 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSG-------KQVKTINSKKYGVDLACFTHHS-NTVIHSSTK 77 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCC-------ceeeEeecccccccEEEEecCC-ceEEEccCC
Confidence 34455567789999999999999999999999999999986 7888888888888899998776 56666665
Q ss_pred -CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 294 -KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 294 -dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
|.+|+..++.+.+ .++.+.||...|+.|+.+|-+. .|++++.|++||+||+|. ..|...+ +...-..+
T Consensus 78 ~d~tIryLsl~dNk----ylRYF~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~---~~cqg~l---~~~~~pi~ 146 (311)
T KOG1446|consen 78 EDDTIRYLSLHDNK----YLRYFPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRV---KKCQGLL---NLSGRPIA 146 (311)
T ss_pred CCCceEEEEeecCc----eEEEcCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecC---CCCceEE---ecCCCcce
Confidence 8899999999988 7899999999999999999997 699999999999999994 3344333 22334568
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc---CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH---HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|.|.|-++|++.....|++||+|.+.. .|..++.- -....+.|.|+|+|. +++.++..+.+.+.|.-.+
T Consensus 147 AfDp~GLifA~~~~~~~IkLyD~Rs~dk-gPF~tf~i~~~~~~ew~~l~FS~dGK-~iLlsT~~s~~~~lDAf~G 219 (311)
T KOG1446|consen 147 AFDPEGLIFALANGSELIKLYDLRSFDK-GPFTTFSITDNDEAEWTDLEFSPDGK-SILLSTNASFIYLLDAFDG 219 (311)
T ss_pred eECCCCcEEEEecCCCeEEEEEecccCC-CCceeEccCCCCccceeeeEEcCCCC-EEEEEeCCCcEEEEEccCC
Confidence 9999999999998888999999998753 34444443 366789999999985 6666777788888886555
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-26 Score=221.08 Aligned_cols=292 Identities=11% Similarity=0.161 Sum_probs=229.3
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~ 254 (812)
.+.|+++.|+| ...+|.|||.||+++||.++...+. .++.+.-...+|.+++|.|+|. .+++++....+..||+.+
T Consensus 213 ~~~I~sv~FHp-~~plllvaG~d~~lrifqvDGk~N~--~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ 289 (514)
T KOG2055|consen 213 HGGITSVQFHP-TAPLLLVAGLDGTLRIFQVDGKVNP--KLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLET 289 (514)
T ss_pred cCCceEEEecC-CCceEEEecCCCcEEEEEecCccCh--hheeeeeccCccceeeecCCCceEEEecccceEEEEeeccc
Confidence 37899999999 9999999999999999999877654 4555666678999999999999 889999999999999998
Q ss_pred CCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 255 GKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
. +..++....|+. ..+.....+|++ .+|+..+..|.|++....++. .+..++ -.+.|.+++|+.+++.
T Consensus 290 a-----k~~k~~~~~g~e~~~~e~FeVShd~-~fia~~G~~G~I~lLhakT~e----li~s~K-ieG~v~~~~fsSdsk~ 358 (514)
T KOG2055|consen 290 A-----KVTKLKPPYGVEEKSMERFEVSHDS-NFIAIAGNNGHIHLLHAKTKE----LITSFK-IEGVVSDFTFSSDSKE 358 (514)
T ss_pred c-----ccccccCCCCcccchhheeEecCCC-CeEEEcccCceEEeehhhhhh----hhheee-eccEEeeEEEecCCcE
Confidence 6 455566666665 356788899999 799999999999999988876 444444 5678999999999985
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC---CCCCCceEEcccC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR---FKKGSSVATFKHH 410 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~---~~~~~~~~~~~~h 410 (812)
|++++.+|.|.+||++ ...|+..+.....-.-++++.++++.+||+|+..|.|.|||... ....+|+..+..-
T Consensus 359 -l~~~~~~GeV~v~nl~---~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNL 434 (514)
T KOG2055|consen 359 -LLASGGTGEVYVWNLR---QNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNL 434 (514)
T ss_pred -EEEEcCCceEEEEecC---CcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhh
Confidence 6667778999999999 45677777544444557788889999999999999999999653 2346788888888
Q ss_pred CCCEEEEEEccCCCcEEEEEEC--CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 488 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 488 (812)
...|++++|+|+. ++||.+|. +..+++-.+..... ....|.+ ...-+.|++++|+|.+..+.++
T Consensus 435 tt~Itsl~Fn~d~-qiLAiaS~~~knalrLVHvPS~TV---------FsNfP~~----n~~vg~vtc~aFSP~sG~lAvG 500 (514)
T KOG2055|consen 435 TTAITSLQFNHDA-QILAIASRVKKNALRLVHVPSCTV---------FSNFPTS----NTKVGHVTCMAFSPNSGYLAVG 500 (514)
T ss_pred heeeeeeeeCcch-hhhhhhhhccccceEEEeccceee---------eccCCCC----CCcccceEEEEecCCCceEEee
Confidence 8999999999986 68887765 66788887765421 1222222 1112369999999998666666
Q ss_pred EeCCCeEEEEe
Q psy4510 489 TANSGFNIFRT 499 (812)
Q Consensus 489 ~~~~~~~~~~~ 499 (812)
...+.+.+|+.
T Consensus 501 Ne~grv~l~kL 511 (514)
T KOG2055|consen 501 NEAGRVHLFKL 511 (514)
T ss_pred cCCCceeeEee
Confidence 66666777753
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=243.07 Aligned_cols=196 Identities=28% Similarity=0.478 Sum_probs=174.5
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE-EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
.|...+.+..|. ..++++++.+++|++|+..++ ..+.+ +.||.+.|+++++.. +..+|++|+.|.++++
T Consensus 206 ~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~-------~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 206 TDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNG-------YLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERV 275 (537)
T ss_pred cCcchhhhheee--cCeEEecCCCceeEEeecccc-------eEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEe
Confidence 356778888888 668999999999999999985 55555 999999999999987 4489999999999999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
||..++. +...+.+|.+.|.++...+. ++++|+.|.+|++|++. .+.++..+ .+|..+|+++..+ +.
T Consensus 276 Wd~~sg~----C~~~l~gh~stv~~~~~~~~---~~~sgs~D~tVkVW~v~---n~~~l~l~-~~h~~~V~~v~~~--~~ 342 (537)
T KOG0274|consen 276 WDCSTGE----CTHSLQGHTSSVRCLTIDPF---LLVSGSRDNTVKVWDVT---NGACLNLL-RGHTGPVNCVQLD--EP 342 (537)
T ss_pred EecCCCc----EEEEecCCCceEEEEEccCc---eEeeccCCceEEEEecc---CcceEEEe-ccccccEEEEEec--CC
Confidence 9999998 78889999999999987654 68889999999999998 55666666 6699999999998 77
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 380 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++++|+.||+|++||++ ..++++++.+|...|+++.+.+. ..+++|+.|++|++||+.+.
T Consensus 343 ~lvsgs~d~~v~VW~~~---~~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~ 402 (537)
T KOG0274|consen 343 LLVSGSYDGTVKVWDPR---TGKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTK 402 (537)
T ss_pred EEEEEecCceEEEEEhh---hceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCch
Confidence 99999999999999999 68899999999999999988764 58999999999999999877
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-25 Score=195.57 Aligned_cols=253 Identities=20% Similarity=0.349 Sum_probs=203.8
Q ss_pred CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCC----CCcEEEee-CCCc
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDL----KTALQTVD-DPFQ 246 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~----~~~l~s~~-~d~~ 246 (812)
+.|.+.|+|.+||| .|.+||||+.|.+|++-.++..... .-.-..+.-|.+.|+.++|-.+ +..|++++ .|-.
T Consensus 86 khhkgsiyc~~ws~-~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~ 164 (350)
T KOG0641|consen 86 KHHKGSIYCTAWSP-CGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCK 164 (350)
T ss_pred cccCccEEEEEecC-ccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcce
Confidence 36789999999999 9999999999999999876654321 1133457789999999999654 34666665 4556
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEE-EecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC---CCCE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAM-DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH---TNSV 322 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h---~~~v 322 (812)
|.+-|...+ ++.+.+.||++.|.++ .|+ + .++++|+.|.+|++||++-.....+.-..+.+. .+.|
T Consensus 165 iy~tdc~~g-------~~~~a~sghtghilalyswn--~-~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessav 234 (350)
T KOG0641|consen 165 IYITDCGRG-------QGFHALSGHTGHILALYSWN--G-AMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAV 234 (350)
T ss_pred EEEeecCCC-------CcceeecCCcccEEEEEEec--C-cEEEccCCCceEEEEeeeccceeeeccCcccCCCccccee
Confidence 666676665 8899999999999877 454 3 799999999999999999877544443444333 3689
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-CCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-KKG 401 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~ 401 (812)
.+++..|.|+ +|++|-.|.+..+||+| ....+..+ ..|...|.|+.|+|...++++|+.|..|++-|+... ...
T Consensus 235 aav~vdpsgr-ll~sg~~dssc~lydir---g~r~iq~f-~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~e 309 (350)
T KOG0641|consen 235 AAVAVDPSGR-LLASGHADSSCMLYDIR---GGRMIQRF-HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHE 309 (350)
T ss_pred EEEEECCCcc-eeeeccCCCceEEEEee---CCceeeee-CCCccceeEEEeCCCceEEEEecccceEEEeecccchhhc
Confidence 9999999999 89999999999999999 44556666 889999999999999999999999999999999631 112
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
-++.....|+..+..+.|+|++ .-+++.+.|.++.+|-+.
T Consensus 310 l~~~vv~ehkdk~i~~rwh~~d-~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 310 LPIMVVAEHKDKAIQCRWHPQD-FSFISSSADKTATLWALN 349 (350)
T ss_pred CceEEEEeccCceEEEEecCcc-ceeeeccCcceEEEeccC
Confidence 3455667799999999999986 688999999999999764
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-25 Score=216.16 Aligned_cols=285 Identities=18% Similarity=0.253 Sum_probs=235.0
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
..|.++...+....+++|+.|..+.++|.... +.+.+++||...|..+.++|+. ..+++++.|..|+||...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~-------q~l~~~~Gh~kki~~v~~~~~~-~~v~~aSad~~i~vws~~ 291 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSN-------QILATLKGHTKKITSVKFHKDL-DTVITASADEIIRVWSVP 291 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchh-------hhhhhccCcceEEEEEEeccch-hheeecCCcceEEeeccc
Confidence 35777777787788999999999999999874 8889999999999999999998 789999999999999998
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCCCCEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~ 382 (812)
... .......|..+|+.+..+|.|. +|++++.||+..+.|++++ .++..... ...-.+++.+|+|||.+|.
T Consensus 292 ~~s----~~~~~~~h~~~V~~ls~h~tge-YllsAs~d~~w~Fsd~~~g---~~lt~vs~~~s~v~~ts~~fHpDgLifg 363 (506)
T KOG0289|consen 292 LSS----EPTSSRPHEEPVTGLSLHPTGE-YLLSASNDGTWAFSDISSG---SQLTVVSDETSDVEYTSAAFHPDGLIFG 363 (506)
T ss_pred ccc----CccccccccccceeeeeccCCc-EEEEecCCceEEEEEccCC---cEEEEEeeccccceeEEeeEcCCceEEe
Confidence 776 4566778999999999999999 5999999999999999954 33433312 2345689999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCc
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ 462 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 462 (812)
+|..||.|+|||+. .+..+..|.+|+++|..|+|+.+| .+|+++..|+.|++||++..+..
T Consensus 364 tgt~d~~vkiwdlk---s~~~~a~Fpght~~vk~i~FsENG-Y~Lat~add~~V~lwDLRKl~n~--------------- 424 (506)
T KOG0289|consen 364 TGTPDGVVKIWDLK---SQTNVAKFPGHTGPVKAISFSENG-YWLATAADDGSVKLWDLRKLKNF--------------- 424 (506)
T ss_pred ccCCCceEEEEEcC---CccccccCCCCCCceeEEEeccCc-eEEEEEecCCeEEEEEehhhccc---------------
Confidence 99999999999998 466889999999999999999987 89999999999999999876310
Q ss_pred eEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEE
Q psy4510 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 542 (812)
Q Consensus 463 ~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~ 542 (812)
.
T Consensus 425 -----------k-------------------------------------------------------------------- 425 (506)
T KOG0289|consen 425 -----------K-------------------------------------------------------------------- 425 (506)
T ss_pred -----------c--------------------------------------------------------------------
Confidence 0
Q ss_pred EeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 543 TISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
.+ .......+.++.|.+.|.+|+.+ +.+=+|++++-.+.
T Consensus 426 t~--------------------------------------~l~~~~~v~s~~fD~SGt~L~~~--g~~l~Vy~~~k~~k- 464 (506)
T KOG0289|consen 426 TI--------------------------------------QLDEKKEVNSLSFDQSGTYLGIA--GSDLQVYICKKKTK- 464 (506)
T ss_pred ee--------------------------------------eccccccceeEEEcCCCCeEEee--cceeEEEEEecccc-
Confidence 00 00001156778888889999988 77766776665443
Q ss_pred cccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 623 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
.+.++..+..|.+..+.+.|.. ..++++++|.|..++++.+
T Consensus 465 ----------------------~W~~~~~~~~~sg~st~v~Fg~-~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 465 ----------------------SWTEIKELADHSGLSTGVRFGE-HAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ----------------------cceeeehhhhcccccceeeecc-cceEEeeccchhheEEeec
Confidence 3346778888999999999998 6789999999999888754
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=205.93 Aligned_cols=264 Identities=20% Similarity=0.301 Sum_probs=212.8
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC--CCCCEEEEEeCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS--TEPGVLATGDCK 294 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp--~~~~~l~sg~~d 294 (812)
.....|.+.|..+...=.|++||+++.|++|+|+.+.... +..++.++.||.++|+.++|.. .| .+||+++.|
T Consensus 5 ~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~----~s~ll~~L~Gh~GPVwqv~wahPk~G-~iLAScsYD 79 (299)
T KOG1332|consen 5 TIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNG----QSKLLAELTGHSGPVWKVAWAHPKFG-TILASCSYD 79 (299)
T ss_pred ehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCC----CceeeeEecCCCCCeeEEeecccccC-cEeeEeecC
Confidence 4456799999998888899999999999999999998852 2378899999999999999965 45 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC-eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|.|.||.-..+ .|. .......|...|++++|.|.+- .+|++++.||.|.|.+.+.. .......+..+|.-.|++++
T Consensus 80 gkVIiWke~~g-~w~-k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~-g~w~t~ki~~aH~~GvnsVs 156 (299)
T KOG1332|consen 80 GKVIIWKEENG-RWT-KAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS-GGWTTSKIVFAHEIGVNSVS 156 (299)
T ss_pred ceEEEEecCCC-chh-hhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC-CCccchhhhhccccccceee
Confidence 99999998776 443 3566788999999999999753 36889999999999999865 23344555589999999999
Q ss_pred EcCC---C-----------CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC---CcEEEEEECCCCE
Q psy4510 374 WNRT---E-----------PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE---SSTFASGGADDQI 436 (812)
Q Consensus 374 ~~~~---~-----------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~---~~~l~s~~~dg~v 436 (812)
|.|. | +.|++|+.|..|+||+..+. .-..-.++.+|.+.|..++|.|.- ...|++++.||+|
T Consensus 157 wapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~-~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~v 235 (299)
T KOG1332|consen 157 WAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD-SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTV 235 (299)
T ss_pred ecCcCCCccccccCcccccceeeccCCccceeeeecCCc-chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcE
Confidence 9986 4 36999999999999999752 223445589999999999999974 3589999999999
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
.||-.+..... -.....+.....+..+.|++.+..+.++++++.+.+|+....
T Consensus 236 iIwt~~~e~e~-------------wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~ 288 (299)
T KOG1332|consen 236 IIWTKDEEYEP-------------WKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVD 288 (299)
T ss_pred EEEEecCccCc-------------ccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCC
Confidence 99998744221 122223334567999999999988888888888888876543
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-26 Score=242.48 Aligned_cols=279 Identities=22% Similarity=0.318 Sum_probs=234.6
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
|...+.+..|+ .+++++++.+++|++|+..++.. ....+.||.+.|.++++..-+..|++|+.|.++++||..+
T Consensus 207 ~~~~~~~~q~~---~~~~~~~s~~~tl~~~~~~~~~~---i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s 280 (537)
T KOG0274|consen 207 DDHVVLCLQLH---DGFFKSGSDDSTLHLWDLNNGYL---ILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST 280 (537)
T ss_pred Ccchhhhheee---cCeEEecCCCceeEEeecccceE---EEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC
Confidence 45678888875 58999999999999999988872 3444999999999999988888999999999999999888
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+ .+..++.||.+.|.++...+ .++++|+.|.+|++|++.++. .+..+.+|.++|+++..+ +. +
T Consensus 281 g-------~C~~~l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~----~l~l~~~h~~~V~~v~~~--~~-~ 343 (537)
T KOG0274|consen 281 G-------ECTHSLQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGA----CLNLLRGHTGPVNCVQLD--EP-L 343 (537)
T ss_pred C-------cEEEEecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcc----eEEEeccccccEEEEEec--CC-E
Confidence 6 99999999999999999876 688999999999999999887 677788899999999998 44 7
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-CceEEcccCCCC
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG-SSVATFKHHTAP 413 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~ 413 (812)
+++|+.|++|++||++ ..+++.++ .+|...|.++.+.+. +.+++|+.|+.|++||+++ . +++.++.+|..-
T Consensus 344 lvsgs~d~~v~VW~~~---~~~cl~sl-~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~---~~~c~~tl~~h~~~ 415 (537)
T KOG0274|consen 344 LVSGSYDGTVKVWDPR---TGKCLKSL-SGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT---KRKCIHTLQGHTSL 415 (537)
T ss_pred EEEEecCceEEEEEhh---hceeeeee-cCCcceEEEEEecCc-ceEEeeeeccceEeecCCc---hhhhhhhhcCCccc
Confidence 9999999999999999 67788888 789999999988765 7999999999999999995 4 789999999999
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC--CCceeEEEEcCCCCCEEEEEeC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG--QKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
+..+.+.. ++|++++.|++|++||..... ++....+ ...|..+++. .+.+++++.+
T Consensus 416 v~~l~~~~---~~Lvs~~aD~~Ik~WD~~~~~-----------------~~~~~~~~~~~~v~~l~~~--~~~il~s~~~ 473 (537)
T KOG0274|consen 416 VSSLLLRD---NFLVSSSADGTIKLWDAEEGE-----------------CLRTLEGRHVGGVSALALG--KEEILCSSDD 473 (537)
T ss_pred cccccccc---ceeEeccccccEEEeecccCc-----------------eeeeeccCCcccEEEeecC--cceEEEEecC
Confidence 98877653 589999999999999999884 3333332 3567777776 2345666666
Q ss_pred CCeEEEEeCCCCCcc
Q psy4510 492 SGFNIFRTISDLPSQ 506 (812)
Q Consensus 492 ~~~~~~~~~~~~~~~ 506 (812)
+.+.+|+..+....+
T Consensus 474 ~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 474 GSVKLWDLRSGTLIR 488 (537)
T ss_pred CeeEEEecccCchhh
Confidence 667777655554443
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-25 Score=234.97 Aligned_cols=279 Identities=16% Similarity=0.209 Sum_probs=196.1
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC------CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP------GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~------~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
-..|+....++++..+++++.+.....|+...+... +........+.+|.+.|.+++|+|....+|++|+.|++
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 344555566677666777777777777765443100 00011123578999999999999943379999999999
Q ss_pred EEEEeCCCCCc---ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 297 IHIWTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 297 i~vwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|++||+..... .......+.+|...|.+++|+|++.++|++++.|++|+|||++++ ..+..+ ..|...|.+++
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg---~~~~~l-~~h~~~V~sla 175 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG---KAVEVI-KCHSDQITSLE 175 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC---eEEEEE-cCCCCceEEEE
Confidence 99999976531 111345678999999999999987668999999999999999843 345555 67999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC-EEEEEEccCCCcEEEEEE----CCCCEEEEEcCCCCchh
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP-VTTVEWHPTESSTFASGG----ADDQIALWDLAVERDSE 448 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~~l~s~~----~dg~v~iwd~~~~~~~~ 448 (812)
|+|++.+|++|+.||.|+|||++ .++.+..+.+|.+. +..+.|.+++. .+++++ .|+.|++||++....
T Consensus 176 ~spdG~lLatgs~Dg~IrIwD~r---sg~~v~tl~~H~~~~~~~~~w~~~~~-~ivt~G~s~s~Dr~VklWDlr~~~~-- 249 (493)
T PTZ00421 176 WNLDGSLLCTTSKDKKLNIIDPR---DGTIVSSVEAHASAKSQRCLWAKRKD-LIITLGCSKSQQRQIMLWDTRKMAS-- 249 (493)
T ss_pred EECCCCEEEEecCCCEEEEEECC---CCcEEEEEecCCCCcceEEEEcCCCC-eEEEEecCCCCCCeEEEEeCCCCCC--
Confidence 99999999999999999999998 46678888888765 45778998865 555443 478999999986532
Q ss_pred HHHhhhhhccCCCceEEee-cCCCceeEEEEcCCCCCEEEEEe-CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 449 IEQREAELKDLPSQLLFIH-LGQKEIKELHWHPQLPGTIISTA-NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
.+.... .....+....|++++..+++++. ++.+.+|...+..... ........++..++|.|.
T Consensus 250 -------------p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~-~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 250 -------------PYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTF-CSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred -------------ceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEE-EeeccCCCCCcceEeccc
Confidence 111111 12234556678888765666554 4446667665443222 222223446777888876
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=231.00 Aligned_cols=383 Identities=16% Similarity=0.207 Sum_probs=269.2
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 312 (812)
|.+++|.+|+.||.|++|++......- ....+.++..|.+.|..+....++ ..|++++.|-+|++|+..... ..+.
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~-s~~~~asme~HsDWVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~~--~~c~ 110 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEP-STPYIASMEHHSDWVNDIILCGNG-KTLISASSDTTVKVWNAHKDN--TFCM 110 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCc-ccchhhhhhhhHhHHhhHHhhcCC-CceEEecCCceEEEeecccCc--chhH
Confidence 667789999999999999987652110 112477889999999999999988 789999999999999998875 2367
Q ss_pred ccccCCCCCEEEEEE-cCCCCeEEEEEECCCeEEEEECCCCCc-------ccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 313 KPLVGHTNSVEDLQW-SPGEKRVLASCSVDLSIRIWDTRVINT-------KSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~-~p~~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
..+..|...|.|+++ .++.. ++|+|+-|+.|.+||+.++.. ......+..++...|.+++.++.|..|++|
T Consensus 111 stir~H~DYVkcla~~ak~~~-lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsG 189 (735)
T KOG0308|consen 111 STIRTHKDYVKCLAYIAKNNE-LVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSG 189 (735)
T ss_pred hhhhcccchheeeeecccCce-eEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEec
Confidence 788899999999999 55554 899999999999999986522 122333434788999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
+..+.|++||.| ....+..+++|+..|..+..+++| +.++++|.||+|++||+...++ +
T Consensus 190 gtek~lr~wDpr---t~~kimkLrGHTdNVr~ll~~dDG-t~~ls~sSDgtIrlWdLgqQrC-----------------l 248 (735)
T KOG0308|consen 190 GTEKDLRLWDPR---TCKKIMKLRGHTDNVRVLLVNDDG-TRLLSASSDGTIRLWDLGQQRC-----------------L 248 (735)
T ss_pred CcccceEEeccc---cccceeeeeccccceEEEEEcCCC-CeEeecCCCceEEeeeccccce-----------------e
Confidence 999999999999 577888999999999999999997 6999999999999999976532 1
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEe
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 544 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~ 544 (812)
T Consensus 249 -------------------------------------------------------------------------------- 248 (735)
T KOG0308|consen 249 -------------------------------------------------------------------------------- 248 (735)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccc
Q psy4510 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQT 624 (812)
Q Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~ 624 (812)
.++..|...|.++..+|+-..+.+| +.||.|..=|+.+....
T Consensus 249 ------------------------------------~T~~vH~e~VWaL~~~~sf~~vYsG--~rd~~i~~Tdl~n~~~~ 290 (735)
T KOG0308|consen 249 ------------------------------------ATYIVHKEGVWALQSSPSFTHVYSG--GRDGNIYRTDLRNPAKS 290 (735)
T ss_pred ------------------------------------eeEEeccCceEEEeeCCCcceEEec--CCCCcEEecccCCchhh
Confidence 1123334456666666777778888 89999999888875311
Q ss_pred cCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEE
Q psy4510 625 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVL 704 (812)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~l 704 (812)
.+++. ...+|..+..+..+ +-+-+++.|+.|+-|...-.. .+++.|++.
T Consensus 291 ----------------------tlick---~daPv~~l~~~~~~-~~~WvtTtds~I~rW~~~~~~-----~l~~s~~~~ 339 (735)
T KOG0308|consen 291 ----------------------TLICK---EDAPVLKLHLHEHD-NSVWVTTTDSSIKRWKLEPDI-----ALSVSGDLD 339 (735)
T ss_pred ----------------------eEeec---CCCchhhhhhcccc-CCceeeeccccceecCCcccc-----ccccCCCCC
Confidence 02221 23356666666523 344677789999999875321 233444433
Q ss_pred EeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEEeeeeeEEEe-
Q psy4510 705 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFVSLVHCIFVW- 783 (812)
Q Consensus 705 asgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~w- 783 (812)
. -+.+....+.+.... .-.+..|- .+|..-+...|.+ .++|=...|.+++||+-.+...- +. ....+
T Consensus 340 ~-~~T~~~~~~~~~~~t-----p~~vi~Gg-~ai~k~~mL~dkR-hVlTkDa~gnv~lwDIl~~~~~~---d~-gk~~FE 407 (735)
T KOG0308|consen 340 F-FSTDSNNHSCDLTNT-----PDSVIPGG-AAIKKHAMLNDKR-HVLTKDAKGNVALWDILACVKVE---DF-GKVDFE 407 (735)
T ss_pred c-ccccCCCccccccCC-----CceeccCc-hhhhhhhhhcCcc-eEeeecCCCCEEEEEeeeeeehh---hc-ccccHH
Confidence 3 222232333332110 11122222 2455556667777 89999999999999997765211 11 12222
Q ss_pred -eecchhhhhh--hheecceee
Q psy4510 784 -LKYQLFVDVY--YWAFVDLVY 802 (812)
Q Consensus 784 -~~~~~~~~~~--~~~~~~~~~ 802 (812)
..++.+-.+| -|++||++.
T Consensus 408 ~iv~k~~~~v~IP~WftVd~k~ 429 (735)
T KOG0308|consen 408 EIVKKLFKQVYIPSWFTVDLKL 429 (735)
T ss_pred HHHHhhcceEeecccEEEeecc
Confidence 1222333333 488888875
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=237.22 Aligned_cols=296 Identities=19% Similarity=0.354 Sum_probs=229.8
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCC---CCCeeeeeEcC-CCCcEEEeeC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH---TNSAEDLQWSD-LKTALQTVDD 243 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h---~~~V~~l~~s~-~~~~l~s~~~ 243 (812)
++.+++++ +.++..++ +...|+.+|.. .+.||.+........+.....+. ...+..+.|.. +.++||+++.
T Consensus 34 ~~~~~k~~---~nAIs~nr-~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~ 108 (839)
T KOG0269|consen 34 MNCKLKAK---ANAISVNR-DINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCST 108 (839)
T ss_pred eeeecccc---cceEeecC-CcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecC
Confidence 34444344 44566678 88888888864 78899877544322222222221 12344577763 4578999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.|.|.+||+... ...+.+..|..|+..+.+++|++..+.+|++|+.||+|++||++... ....+.+....|.
T Consensus 109 nG~i~vWdlnk~----~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~----S~~t~~~nSESiR 180 (839)
T KOG0269|consen 109 NGVISVWDLNKS----IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKK----SKSTFRSNSESIR 180 (839)
T ss_pred CCcEEEEecCcc----ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccc----ccccccccchhhh
Confidence 999999999872 12366778999999999999999999999999999999999999887 4667777888999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+++|+|...+.|+++...|.+++||+|. ...+...+ .+|.++|.|+.|+|++.+|||||.|++|+|||+.... ..+
T Consensus 181 DV~fsp~~~~~F~s~~dsG~lqlWDlRq--p~r~~~k~-~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~-~~~ 256 (839)
T KOG0269|consen 181 DVKFSPGYGNKFASIHDSGYLQLWDLRQ--PDRCEKKL-TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR-AKP 256 (839)
T ss_pred ceeeccCCCceEEEecCCceEEEeeccC--chhHHHHh-hcccCceEEEeecCCCceeeecCCCccEEEEeccCCC-ccc
Confidence 9999999888999999999999999996 34566666 8999999999999999999999999999999997422 233
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEEC--CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+.++. ...+|.+|.|-|..+..|++++. |-.|+|||++..-- +......+...++.++|...
T Consensus 257 ~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYI---------------P~~t~~eH~~~vt~i~W~~~ 320 (839)
T KOG0269|consen 257 KHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYI---------------PYATFLEHTDSVTGIAWDSG 320 (839)
T ss_pred eeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccc---------------cceeeeccCccccceeccCC
Confidence 44443 46789999999998888988875 77999999997732 22223334457899999987
Q ss_pred CCCEEEEEeCCCeEE
Q psy4510 482 LPGTIISTANSGFNI 496 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~ 496 (812)
.+..+.+++.++..+
T Consensus 321 d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 321 DRINLWSCSKDGTVL 335 (839)
T ss_pred CceeeEeecCccHHH
Confidence 778888888888643
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=213.00 Aligned_cols=332 Identities=23% Similarity=0.332 Sum_probs=227.8
Q ss_pred CCeeeeChhHHhhhhccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCcccc
Q psy4510 63 GESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELE 142 (812)
Q Consensus 63 ~~~~~~d~~~y~~~~~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~ 142 (812)
++-.+|-.++|...-...+.||.-+..+|+- .=+.+|+.. .+-+++++.+
T Consensus 84 ~eR~e~P~~~Ylv~gtQa~~~~~N~l~vlkl-------------~nl~~t~~~-----------------~~gd~~~~~e 133 (440)
T KOG0302|consen 84 DERTEFPHTAYLVAGTQALDAPDNELMVLKL-------------SNLHKTRNP-----------------NDGDGEDEEE 133 (440)
T ss_pred cccccCchHhhhhhhhhccccccCceEEEEe-------------eeeecccCC-----------------ccCCCCCccc
Confidence 5567888889988888888888877766542 223344332 1112223333
Q ss_pred cCCCCccchhhhcccCCCCCCCC-CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC---CCcccccccc
Q psy4510 143 DDENDPFQLAEHNKKRGKGPGIP-TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---AGAWQVDQKP 218 (812)
Q Consensus 143 ~~~~d~~~~~~~~~~~~~~~~~~-~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~---~~~~~~~~~~ 218 (812)
++++|-+-..+.. ..|... ..+++.. --.+.+.|+.||. .|+.=+=.-.. .++..+-.. ......++.+
T Consensus 134 ddedD~~P~~~~~----~i~h~g~~NRvr~~-~~~~~~~~aswse-~G~V~Vw~l~~-~l~~l~~~~~~~~~s~~~Pl~t 206 (440)
T KOG0302|consen 134 DDEDDRKPQIEMK----SIPHYGGINRVRVS-RLGNEVLCASWSE-NGRVQVWDLAP-HLNALSEPGLEVKDSEFRPLFT 206 (440)
T ss_pred cchhhcccccccc----ccccccccceeeec-ccCCcceeeeecc-cCcEEEEEchh-hhhhhcCccccccccccCceEE
Confidence 3333312111110 112211 2222222 1227899999999 88743321100 111111000 0012236778
Q ss_pred cCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 219 LGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+.+|...=++|+|||... .|++|..-+.|++|...++... .-...|.+|+..|..|+|||...++|++|+.||+|
T Consensus 207 ~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~----vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsI 282 (440)
T KOG0302|consen 207 FNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWK----VDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSI 282 (440)
T ss_pred ecccCccceeeecccccccccccCccccceEeeeeccCcee----ecCccccccccchhhhccCCccCceEEeeecCceE
Confidence 899999999999999543 4889999999999999886211 11234677999999999999998999999999999
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
+|||++.+.+... ...+.|.+.|+.|.|+.... +||+|+.||+++|||+|..+...++..+ .-|..+|++|.|+|.
T Consensus 283 rIWDiRs~~~~~~--~~~kAh~sDVNVISWnr~~~-lLasG~DdGt~~iwDLR~~~~~~pVA~f-k~Hk~pItsieW~p~ 358 (440)
T KOG0302|consen 283 RIWDIRSGPKKAA--VSTKAHNSDVNVISWNRREP-LLASGGDDGTLSIWDLRQFKSGQPVATF-KYHKAPITSIEWHPH 358 (440)
T ss_pred EEEEecCCCccce--eEeeccCCceeeEEccCCcc-eeeecCCCceEEEEEhhhccCCCcceeE-EeccCCeeEEEeccc
Confidence 9999998853222 23378999999999999998 8999999999999999988877788888 889999999999997
Q ss_pred CC-EEEEEeCCCcEEEEecCCCCCC-------------CceEEcccC--CCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 378 EP-LIVSGGDDGCIHVWDLRRFKKG-------------SSVATFKHH--TAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 378 ~~-~l~sg~~dg~i~iwd~~~~~~~-------------~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
.. .|++++.|.+|.|||+.--... -+-+.+--| +..|..+.|+++-+.+|++.+.|| +.||-
T Consensus 359 e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 359 EDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred cCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 75 8899999999999999632110 011112223 456889999999888999999998 55553
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=231.21 Aligned_cols=255 Identities=16% Similarity=0.237 Sum_probs=184.4
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcc----eecccccc
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW----QVDQKPLV 316 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~----~~~~~~~~ 316 (812)
|+..+.+++|+.... .++..+.+|.+.|.+++|+|+...+|++|+.||+|+||++.++... ......+.
T Consensus 50 GG~~gvI~L~~~~r~-------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~ 122 (568)
T PTZ00420 50 GGLIGAIRLENQMRK-------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK 122 (568)
T ss_pred CCceeEEEeeecCCC-------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEee
Confidence 446778999998763 6788999999999999999985489999999999999999865320 01233577
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+|...|.+++|+|++..+|++++.|++|+|||++++. .+..+ .|...|.+++|+|+|.+|++++.|+.|+|||++
T Consensus 123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~---~~~~i--~~~~~V~SlswspdG~lLat~s~D~~IrIwD~R 197 (568)
T PTZ00420 123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK---RAFQI--NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPR 197 (568)
T ss_pred cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc---EEEEE--ecCCcEEEEEECCCCCEEEEEecCCEEEEEECC
Confidence 8999999999999998778899999999999998543 33444 256789999999999999999999999999999
Q ss_pred CCCCCCceEEcccCCCCEEEEE-----EccCCCcEEEEEECCC----CEEEEEcCCCCchhHHHhhhhhccCCCceEEee
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVE-----WHPTESSTFASGGADD----QIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~-----~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (812)
.+..+..+.+|.+.+.+.. |++++ .+|++++.|+ +|+|||++.... | .....+
T Consensus 198 ---sg~~i~tl~gH~g~~~s~~v~~~~fs~d~-~~IlTtG~d~~~~R~VkLWDlr~~~~-------------p-l~~~~l 259 (568)
T PTZ00420 198 ---KQEIASSFHIHDGGKNTKNIWIDGLGGDD-NYILSTGFSKNNMREMKLWDLKNTTS-------------A-LVTMSI 259 (568)
T ss_pred ---CCcEEEEEecccCCceeEEEEeeeEcCCC-CEEEEEEcCCCCccEEEEEECCCCCC-------------c-eEEEEe
Confidence 4677888999988764433 44765 5788877664 799999986432 1 111122
Q ss_pred cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 468 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 468 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
.....+....|.++...+++++..|+...++.........+.......++..++|.|.
T Consensus 260 d~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pk 317 (568)
T PTZ00420 260 DNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPK 317 (568)
T ss_pred cCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEccc
Confidence 2222333334555545666666666644444443333333333334567888999997
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=220.16 Aligned_cols=248 Identities=20% Similarity=0.300 Sum_probs=211.7
Q ss_pred CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
++|...|.+++.|| +|++||||+.|..|.||+..+.+ .++.+.+|.+.|.+++|-.....|.+++.|+.+++|++
T Consensus 199 ~~h~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~e----hv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~ 273 (479)
T KOG0299|consen 199 KGHVKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLE----HVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSI 273 (479)
T ss_pred ccccceeEEEEEcC-CCcEEEecCCCceEEEecCcccc----hhhcccccccceeeeeeecCccceeeeecCCceEEEeh
Confidence 38999999999999 99999999999999999999998 77889999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 253 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+. ...+.++.||.+.|.+|.-..-. ..+-+|+.|+++++|++.... +..+.+|.+.+.|++|-.+..
T Consensus 274 ~~-------~s~vetlyGHqd~v~~IdaL~re-R~vtVGgrDrT~rlwKi~ees-----qlifrg~~~sidcv~~In~~H 340 (479)
T KOG0299|consen 274 DQ-------LSYVETLYGHQDGVLGIDALSRE-RCVTVGGRDRTVRLWKIPEES-----QLIFRGGEGSIDCVAFINDEH 340 (479)
T ss_pred hH-------hHHHHHHhCCccceeeechhccc-ceEEeccccceeEEEeccccc-----eeeeeCCCCCeeeEEEecccc
Confidence 87 47888999999999999988876 677777799999999996553 667889999999999998775
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCC-----------CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-CC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT-----------SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-KK 400 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~ 400 (812)
|++||.+|.|.+|++. .++++.+...+|. ..|++++..|...++++|+.+|.|++|-+... ..
T Consensus 341 --fvsGSdnG~IaLWs~~---KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~ 415 (479)
T KOG0299|consen 341 --FVSGSDNGSIALWSLL---KKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRA 415 (479)
T ss_pred --eeeccCCceEEEeeec---ccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccc
Confidence 9999999999999997 4555555544442 37999999999999999999999999998742 12
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..++..+. -.+-|++++|+++|..+++..+...++--|-....
T Consensus 416 i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k~ 458 (479)
T KOG0299|consen 416 INLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLKS 458 (479)
T ss_pred cceeeecc-cccEEEEEEEccCCCEEEEecccccccceeeEeec
Confidence 34555555 57889999999998767777777777777765544
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=237.64 Aligned_cols=300 Identities=17% Similarity=0.272 Sum_probs=206.7
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc------ccCCCCCEEEEEEcC---CCCe-EEEEEE
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP------LVGHTNSVEDLQWSP---GEKR-VLASCS 339 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~------~~~h~~~v~~~~~~p---~~~~-~l~s~~ 339 (812)
.|.+.|+++.||++| .+||+|+.||.|+||.+.......+.... ...-.+.+.-+.-++ .++. ..-.+.
T Consensus 265 ah~gaIw~mKFS~DG-KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDG-KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCCCC-ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 799999999999999 89999999999999998773310000000 000000011111111 0000 111122
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
....+.+-+..-.-...++..+ .+|.+.|..|+|+.++ +|++++.|.+|++|++. ...++..|. |..-||||+|
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef-~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~---~~~CL~~F~-HndfVTcVaF 417 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEF-KGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPG---RKECLKVFS-HNDFVTCVAF 417 (712)
T ss_pred CCccccCCCccccccccchhhh-hccchhheecccccCC-eeEeccccccEEeecCC---CcceeeEEe-cCCeeEEEEe
Confidence 2222222111111122344555 8999999999999765 99999999999999997 577888887 9999999999
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
+|.+.++|++|+-|+.|+||++... ++..-..-+.-|+++++.|+|.+.++++-.+...+|.+
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~-----------------~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t 480 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDK-----------------KVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDT 480 (712)
T ss_pred cccCCCcEeecccccceEEeecCcC-----------------eeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEc
Confidence 9999999999999999999999877 56666666678999999999987777777766666655
Q ss_pred CCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc
Q psy4510 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM 579 (812)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (812)
....... ...++-. +
T Consensus 481 ~~lk~~~------------~~~I~~~----------------------~------------------------------- 495 (712)
T KOG0283|consen 481 EGLKLVS------------DFHIRLH----------------------N------------------------------- 495 (712)
T ss_pred cCCeEEE------------eeeEeec----------------------c-------------------------------
Confidence 4321111 0000000 0
Q ss_pred ceEEecccceEEEEEEeccCC-eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC-
Q psy4510 580 NSYFIRHRGCINRVRTCQYGS-TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT- 657 (812)
Q Consensus 580 ~~~~~~h~~~v~~l~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~- 657 (812)
..-..|. .|+.+.|.|... .+++. +.|.+|||||..... ++..|+|+..
T Consensus 496 -~Kk~~~~-rITG~Q~~p~~~~~vLVT--SnDSrIRI~d~~~~~-------------------------lv~KfKG~~n~ 546 (712)
T KOG0283|consen 496 -KKKKQGK-RITGLQFFPGDPDEVLVT--SNDSRIRIYDGRDKD-------------------------LVHKFKGFRNT 546 (712)
T ss_pred -CccccCc-eeeeeEecCCCCCeEEEe--cCCCceEEEeccchh-------------------------hhhhhcccccC
Confidence 0112233 799999987554 35555 799999999997765 6777887764
Q ss_pred -ceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 658 -EGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 658 -~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
.-....|+. +|++|++++.|..|.||+...
T Consensus 547 ~SQ~~Asfs~-Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 547 SSQISASFSS-DGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CcceeeeEcc-CCCEEEEeecCceEEEEeCCC
Confidence 446788999 899999999999999999843
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-25 Score=214.28 Aligned_cols=243 Identities=18% Similarity=0.331 Sum_probs=198.5
Q ss_pred CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE------------------EcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS------------------FSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 235 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~------------------~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
|+++|.|..+..|.|||+.-.. ...|..+ -.+|++.|.+|+|+..-.++||+|+.|.+
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d----~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~T 267 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVD----AVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKT 267 (463)
T ss_pred cceEEEeccCceeEEecccccc----ccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCce
Confidence 5799999999999999986532 1122222 23799999999999988889999999999
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
|++||+.+++ +...+..|.+.|.+++|+|....+|++|+.|++|++.|.|..........+ .+.|-.++|+|
T Consensus 268 V~lWD~~~g~----p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~----~g~VEkv~w~~ 339 (463)
T KOG0270|consen 268 VKLWDVDTGK----PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF----DGEVEKVAWDP 339 (463)
T ss_pred EEEEEcCCCC----cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe----ccceEEEEecC
Confidence 9999999998 677788899999999999999999999999999999999964433333333 67899999999
Q ss_pred CCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 377 TEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 377 ~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
... .++++..||+|+-+|+|+ .++++.+++.|.++|.+|++++..+.++++++.|+.|++|++.....
T Consensus 340 ~se~~f~~~tddG~v~~~D~R~--~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~--------- 408 (463)
T KOG0270|consen 340 HSENSFFVSTDDGTVYYFDIRN--PGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP--------- 408 (463)
T ss_pred CCceeEEEecCCceEEeeecCC--CCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCC---------
Confidence 886 788889999999999998 66999999999999999999999899999999999999999987643
Q ss_pred hccCCCceEEeecC-CCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcc
Q psy4510 456 LKDLPSQLLFIHLG-QKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQ 506 (812)
Q Consensus 456 ~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 506 (812)
.....|.. -+...++++.|+.++.++.++..+ +.+|+.....+.+
T Consensus 409 ------~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 409 ------KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred ------cccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 11111111 123677888999999998888877 5677665554433
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-25 Score=226.52 Aligned_cols=285 Identities=19% Similarity=0.326 Sum_probs=233.1
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE-EEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED-LQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~~l~s~~~d 341 (812)
+..+.+.||...|..++..+. ..+++++.||++++|+-...+ ......+.+|.+.|.. +++.+..+..+++|+.|
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~--~~i~s~sRd~t~~vw~~~~~~--~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDG--VCIISGSRDGTVKVWAKKGKQ--YLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred eeEEEeccCccchheeEecCC--eEEeecCCCCceeeeeccCcc--cccceecccCcceeeccceeccccCcceEeeccc
Confidence 445678999999999998776 489999999999999976654 1234567788888877 88887555469999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
.+|.+|.+. ...++..+ .+|...|.|++...++. +++|+-|.++++|-.. +....+++|+..|.++..-|
T Consensus 81 ~~i~v~~~~---~~~P~~~L-kgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~-----~l~~~l~gH~asVWAv~~l~ 150 (745)
T KOG0301|consen 81 TTIIVFKLS---QAEPLYTL-KGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG-----ELVYSLQGHTASVWAVASLP 150 (745)
T ss_pred ceEEEEecC---CCCchhhh-hccccceeeeecCCcCc-eEecccccceEEecch-----hhhcccCCcchheeeeeecC
Confidence 999999998 44556666 89999999999887776 9999999999999874 56667999999999999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.+ .++||+.|.+|++|.-.+.
T Consensus 151 e~--~~vTgsaDKtIklWk~~~~--------------------------------------------------------- 171 (745)
T KOG0301|consen 151 EN--TYVTGSADKTIKLWKGGTL--------------------------------------------------------- 171 (745)
T ss_pred CC--cEEeccCcceeeeccCCch---------------------------------------------------------
Confidence 75 7999999999999974221
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
.+
T Consensus 172 ------------------------------------------------------------------------------l~ 173 (745)
T KOG0301|consen 172 ------------------------------------------------------------------------------LK 173 (745)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 33
Q ss_pred EEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEE
Q psy4510 582 YFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 661 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~ 661 (812)
.+.+|...|..+++-+++. ++++ +.||.|++|++... ++..+.||+..|++
T Consensus 174 tf~gHtD~VRgL~vl~~~~-flSc--sNDg~Ir~w~~~ge--------------------------~l~~~~ghtn~vYs 224 (745)
T KOG0301|consen 174 TFSGHTDCVRGLAVLDDSH-FLSC--SNDGSIRLWDLDGE--------------------------VLLEMHGHTNFVYS 224 (745)
T ss_pred hhccchhheeeeEEecCCC-eEee--cCCceEEEEeccCc--------------------------eeeeeeccceEEEE
Confidence 5667888899999988865 5565 79999999999544 68889999999999
Q ss_pred EEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 662 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 662 l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
+...+ +.+.++|++.|+++|||+.. . +.+++.-.+-.|+++
T Consensus 225 is~~~-~~~~Ivs~gEDrtlriW~~~----------------------------------e----~~q~I~lPttsiWsa 265 (745)
T KOG0301|consen 225 ISMAL-SDGLIVSTGEDRTLRIWKKD----------------------------------E----CVQVITLPTTSIWSA 265 (745)
T ss_pred EEecC-CCCeEEEecCCceEEEeecC----------------------------------c----eEEEEecCccceEEE
Confidence 99777 56689999998888888852 1 344555455689999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
++-++|. +++|+.||.||||..+..
T Consensus 266 ~~L~NgD--Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 266 KVLLNGD--IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred EEeeCCC--EEEeccCceEEEEEeccc
Confidence 9999998 899999999999997744
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-25 Score=213.73 Aligned_cols=252 Identities=18% Similarity=0.270 Sum_probs=215.0
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+.+..+.||.-.|+.+.|+| +...+++++.|..|+||...... .......|..+|+.+...|.|.||++++.|++
T Consensus 252 q~l~~~~Gh~kki~~v~~~~-~~~~v~~aSad~~i~vws~~~~s----~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~ 326 (506)
T KOG0289|consen 252 QILATLKGHTKKITSVKFHK-DLDTVITASADEIIRVWSVPLSS----EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGT 326 (506)
T ss_pred hhhhhccCcceEEEEEEecc-chhheeecCCcceEEeecccccc----CccccccccccceeeeeccCCcEEEEecCCce
Confidence 56778889999999999999 99999999999999999987766 66778899999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
....|+.++ ..+..... ..-.+++++|+||| .+|.+|..||.|+|||+.++. ....|.+|+++|..
T Consensus 327 w~Fsd~~~g-------~~lt~vs~~~s~v~~ts~~fHpDg-Lifgtgt~d~~vkiwdlks~~----~~a~Fpght~~vk~ 394 (506)
T KOG0289|consen 327 WAFSDISSG-------SQLTVVSDETSDVEYTSAAFHPDG-LIFGTGTPDGVVKIWDLKSQT----NVAKFPGHTGPVKA 394 (506)
T ss_pred EEEEEccCC-------cEEEEEeeccccceeEEeeEcCCc-eEEeccCCCceEEEEEcCCcc----ccccCCCCCCceeE
Confidence 999999986 33333322 22358999999999 899999999999999999887 57889999999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
++|+.+|- +|++++.|+.|++||+|.. ....++.......+++++|.+.|.+|+.++.+=.|++++-.. +....+
T Consensus 395 i~FsENGY-~Lat~add~~V~lwDLRKl---~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~-k~W~~~ 469 (506)
T KOG0289|consen 395 ISFSENGY-WLATAADDGSVKLWDLRKL---KNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKT-KSWTEI 469 (506)
T ss_pred EEeccCce-EEEEEecCCeEEEEEehhh---cccceeeccccccceeEEEcCCCCeEEeecceeEEEEEeccc-ccceee
Confidence 99999986 7999999999999999953 344455444455899999999999999998887777777443 235677
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
..+..|.+..+++.|.... ++++++|.|..++++-+
T Consensus 470 ~~~~~~sg~st~v~Fg~~a-q~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 470 KELADHSGLSTGVRFGEHA-QYLASTSMDAILRLYAL 505 (506)
T ss_pred ehhhhcccccceeeecccc-eEEeeccchhheEEeec
Confidence 8888899999999998874 79999999999888754
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=198.35 Aligned_cols=295 Identities=20% Similarity=0.292 Sum_probs=220.5
Q ss_pred EEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEEeC
Q psy4510 106 LYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 185 (812)
Q Consensus 106 ~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~~s 185 (812)
.+|+.||+..+.+ |++.++++. + + ...+..+ .|..|.++|+.++-+
T Consensus 27 icFlvgTnslK~d-NqVhll~~d------------------~-e-----------~s~l~sk---vf~h~agEvw~las~ 72 (370)
T KOG1007|consen 27 ICFLVGTNSLKED-NQVHLLRLD------------------S-E-----------GSELLSK---VFFHHAGEVWDLASS 72 (370)
T ss_pred eEEEEeccccCCc-ceeEEEEec------------------C-c-----------cchhhhh---hhhcCCcceehhhcC
Confidence 5799999999977 999999863 0 0 0111111 222467999999999
Q ss_pred CCCCCeEEEecCC-------CcEEEEccCCCCcc-----cccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 186 STEPGVLATGDCK-------RNIHIWTPREAGAW-----QVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 186 p~~~~~lat~~~d-------g~v~iwd~~~~~~~-----~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
|.+.++|+|+..+ -.+.||.+...... ..++..|. .+-+.|.|+.|.|++..|++.. +..|.+|++
T Consensus 73 P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l 151 (370)
T KOG1007|consen 73 PFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSL 151 (370)
T ss_pred CCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEc
Confidence 9999999988432 23689988765432 22333444 4566999999999999998876 889999999
Q ss_pred CCCCCCCCCCCCceEEcCCCCcEEEEEecCCCC-CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 253 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
..+...... -+...-.+|....++-+|+|... +.+++. .|+++..||+++..+ ....-..|...|.++.|+|+.
T Consensus 152 ~ess~~vae-v~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~---~~sI~dAHgq~vrdlDfNpnk 226 (370)
T KOG1007|consen 152 DESSKIVAE-VLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKK---NNSIEDAHGQRVRDLDFNPNK 226 (370)
T ss_pred ccCcchhee-ecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhh---hcchhhhhcceeeeccCCCCc
Confidence 886311000 01111123566788999999432 445554 479999999998763 233445788899999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCC-----------
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFK----------- 399 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~----------- 399 (812)
+++|++|+.||.|+|||+|. .+.++..+ .+|...|.++.|+|.- +++++|+.|..|.+|......
T Consensus 227 q~~lvt~gDdgyvriWD~R~--tk~pv~el-~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~de 303 (370)
T KOG1007|consen 227 QHILVTCGDDGYVRIWDTRK--TKFPVQEL-PGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDE 303 (370)
T ss_pred eEEEEEcCCCccEEEEeccC--CCcccccc-CCCceEEEEEEecCccceEEEecCCCceeEEEecccccccccccccccc
Confidence 99999999999999999996 45566666 8999999999999965 599999999999999764211
Q ss_pred ---------------CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 400 ---------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 400 ---------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
....+.++..|...|.+++|+.-++.+||+-+.||++.|=.+..
T Consensus 304 se~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r 362 (370)
T KOG1007|consen 304 SESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR 362 (370)
T ss_pred ccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence 11234567789999999999999999999999999998866543
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-24 Score=199.29 Aligned_cols=314 Identities=18% Similarity=0.264 Sum_probs=218.2
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeE
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
+..+++|.+.|++++|+.+| ..|++++.|++|++|+++.-...........-..+-.+.+.|+|+-+.+++++-...++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 45689999999999999999 89999999999999999864321000000111122468899999999888888888899
Q ss_pred EEEECCCCCcccce--------eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE
Q psy4510 345 RIWDTRVINTKSCM--------LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 345 ~iwd~~~~~~~~~~--------~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 416 (812)
++|.+.....+.-. ..+...|...+..+-...++.+|++++.|..|.+|+++ ++.+..+......-+.
T Consensus 158 ~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk----Gq~L~~idtnq~~n~~ 233 (420)
T KOG2096|consen 158 CVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK----GQLLQSIDTNQSSNYD 233 (420)
T ss_pred EEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC----Cceeeeeccccccccc
Confidence 99987533222111 12335566777777777777899999999999999995 7888888777777778
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
.+.+|+| +++++++.---|++|..--.+... +.
T Consensus 234 aavSP~G-RFia~~gFTpDVkVwE~~f~kdG~------------------------fq---------------------- 266 (420)
T KOG2096|consen 234 AAVSPDG-RFIAVSGFTPDVKVWEPIFTKDGT------------------------FQ---------------------- 266 (420)
T ss_pred eeeCCCC-cEEEEecCCCCceEEEEEeccCcc------------------------hh----------------------
Confidence 8999997 699999888889999754332100 00
Q ss_pred EEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCC
Q psy4510 497 FRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKD 576 (812)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (812)
.
T Consensus 267 -------------------------------------------------------------------------------e 267 (420)
T KOG2096|consen 267 -------------------------------------------------------------------------------E 267 (420)
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred CccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC
Q psy4510 577 PVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 656 (812)
Q Consensus 577 ~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~ 656 (812)
......+.+|...|..++||++..+++++ +.||+++|||..-....-.+|..+.... .+ +.+-.
T Consensus 268 v~rvf~LkGH~saV~~~aFsn~S~r~vtv--SkDG~wriwdtdVrY~~~qDpk~Lk~g~-----------~p---l~aag 331 (420)
T KOG2096|consen 268 VKRVFSLKGHQSAVLAAAFSNSSTRAVTV--SKDGKWRIWDTDVRYEAGQDPKILKEGS-----------AP---LHAAG 331 (420)
T ss_pred hhhhheeccchhheeeeeeCCCcceeEEE--ecCCcEEEeeccceEecCCCchHhhcCC-----------cc---hhhcC
Confidence 00133578899999999999999999999 8999999999986654333333322210 01 11112
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCc
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 736 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~ 736 (812)
+....++.+| .+..|| ++. -..++++..++++.. -.--..|..
T Consensus 332 ~~p~RL~lsP-~g~~lA--------------------------------~s~-gs~l~~~~se~g~~~---~~~e~~h~~ 374 (420)
T KOG2096|consen 332 SEPVRLELSP-SGDSLA--------------------------------VSF-GSDLKVFASEDGKDY---PELEDIHST 374 (420)
T ss_pred CCceEEEeCC-CCcEEE--------------------------------eec-CCceEEEEcccCccc---hhHHHhhcC
Confidence 2333556666 444444 332 235777777777642 222356889
Q ss_pred ceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 737 SVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 737 ~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
.|++|+|+++|+ +++||| |+.+++..
T Consensus 375 ~Is~is~~~~g~-~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 375 TISSISYSSDGK-YIATCG-DRYVRVIR 400 (420)
T ss_pred ceeeEEecCCCc-EEeeec-ceeeeeec
Confidence 999999999999 899998 56666654
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=222.04 Aligned_cols=283 Identities=19% Similarity=0.240 Sum_probs=233.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE-EEecCCCCCEEEEEeC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA-MDWSSTEPGVLATGDC 293 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~-l~~sp~~~~~l~sg~~ 293 (812)
....+.+|...|..+++.+.. .+++++.||++++|+.... .......+.+|.+-|.. +++-+..+.+|++|+.
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~-----~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~ 79 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGK-----QYLETHAFEGPKGFIANSICYAESDKGRLVVGGM 79 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCc-----ccccceecccCcceeeccceeccccCcceEeecc
Confidence 456789999999999986555 7899999999999998664 34566778888888877 8888755478999999
Q ss_pred CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|.+|.+|.+.... +...+++|...|.++....++. ++|||.|.++++|-... +...+ .+|...|.++.
T Consensus 80 D~~i~v~~~~~~~----P~~~LkgH~snVC~ls~~~~~~--~iSgSWD~TakvW~~~~-----l~~~l-~gH~asVWAv~ 147 (745)
T KOG0301|consen 80 DTTIIVFKLSQAE----PLYTLKGHKSNVCSLSIGEDGT--LISGSWDSTAKVWRIGE-----LVYSL-QGHTASVWAVA 147 (745)
T ss_pred cceEEEEecCCCC----chhhhhccccceeeeecCCcCc--eEecccccceEEecchh-----hhccc-CCcchheeeee
Confidence 9999999999887 7889999999999999877775 89999999999998752 33444 89999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhh
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
.-|.+ .++||+.|.+|++|.- +..+.+|.+|.+.|.++++-|+. .|++++.||.|++|++...
T Consensus 148 ~l~e~-~~vTgsaDKtIklWk~-----~~~l~tf~gHtD~VRgL~vl~~~--~flScsNDg~Ir~w~~~ge--------- 210 (745)
T KOG0301|consen 148 SLPEN-TYVTGSADKTIKLWKG-----GTLLKTFSGHTDCVRGLAVLDDS--HFLSCSNDGSIRLWDLDGE--------- 210 (745)
T ss_pred ecCCC-cEEeccCcceeeeccC-----CchhhhhccchhheeeeEEecCC--CeEeecCCceEEEEeccCc---------
Confidence 99888 8999999999999985 57899999999999999999974 5999999999999998543
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
.
T Consensus 211 --------~----------------------------------------------------------------------- 211 (745)
T KOG0301|consen 211 --------V----------------------------------------------------------------------- 211 (745)
T ss_pred --------e-----------------------------------------------------------------------
Confidence 1
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
.....+|+.-++++...+++..++++ ++|+++
T Consensus 212 ----------------------------------------------l~~~~ghtn~vYsis~~~~~~~Ivs~--gEDrtl 243 (745)
T KOG0301|consen 212 ----------------------------------------------LLEMHGHTNFVYSISMALSDGLIVST--GEDRTL 243 (745)
T ss_pred ----------------------------------------------eeeeeccceEEEEEEecCCCCeEEEe--cCCceE
Confidence 11244556667777766666677777 899999
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
+||+... +.+.+.-..-.|+++.+-+ .+ -|++|+.||.||||....
T Consensus 244 riW~~~e---------------------------~~q~I~lPttsiWsa~~L~-Ng-DIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 244 RIWKKDE---------------------------CVQVITLPTTSIWSAKVLL-NG-DIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred EEeecCc---------------------------eEEEEecCccceEEEEEee-CC-CEEEeccCceEEEEEecc
Confidence 9999873 4455553444899999887 34 689999999999999874
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-24 Score=197.15 Aligned_cols=312 Identities=20% Similarity=0.276 Sum_probs=231.5
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc--------ce---eccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--------WQ---VDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~--------~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.+.|.+.|.+|...+...+++++|+.||.|.+||++.... .. +....-.+|.-.|.++.|-|-..-+|.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 3458899999999998768999999999999999986541 00 112233568889999999998887999
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
+++.|.++++||+.+.+ ....+ .-.+.|.+-+++|-.. ++|+|..+-.|++.|+. .+..-+++.+|.+.
T Consensus 119 ssSFDhtlKVWDtnTlQ---~a~~F--~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~---SGs~sH~LsGHr~~ 190 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQ---EAVDF--KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA---SGSFSHTLSGHRDG 190 (397)
T ss_pred cccccceEEEeecccce---eeEEe--ecCceeehhhcChhhhcceEEEEecCCCcEEEEecc---CCcceeeeccccCc
Confidence 99999999999998543 33333 2356788888888543 88999999999999998 68899999999999
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
|.++.|+|..+.+|++|+.||.|++||++... +.+.+-
T Consensus 191 vlaV~Wsp~~e~vLatgsaDg~irlWDiRras--------------------------------------gcf~~l---- 228 (397)
T KOG4283|consen 191 VLAVEWSPSSEWVLATGSADGAIRLWDIRRAS--------------------------------------GCFRVL---- 228 (397)
T ss_pred eEEEEeccCceeEEEecCCCceEEEEEeeccc--------------------------------------ceeEEe----
Confidence 99999999988999999999999999998662 111110
Q ss_pred eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccc
Q psy4510 494 FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDR 573 (812)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 573 (812)
+.-+.
T Consensus 229 ----D~hn~----------------------------------------------------------------------- 233 (397)
T KOG4283|consen 229 ----DQHNT----------------------------------------------------------------------- 233 (397)
T ss_pred ----ecccC-----------------------------------------------------------------------
Confidence 00000
Q ss_pred cCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec
Q psy4510 574 RKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS 653 (812)
Q Consensus 574 ~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (812)
+.+...+.-..|.+.++.++|+.+|.++++. +.|.++++|+...+..++..... +.+++... . .+..-.
T Consensus 234 -k~~p~~~~n~ah~gkvngla~tSd~~~l~~~--gtd~r~r~wn~~~G~ntl~~~g~-~~~n~~~~------~-~~~~~~ 302 (397)
T KOG4283|consen 234 -KRPPILKTNTAHYGKVNGLAWTSDARYLASC--GTDDRIRVWNMESGRNTLREFGP-IIHNQTTS------F-AVHIQS 302 (397)
T ss_pred -ccCccccccccccceeeeeeecccchhhhhc--cCccceEEeecccCccccccccc-cccccccc------c-eEEEee
Confidence 0011122345788899999999999999998 89999999999988754321111 11111110 0 011113
Q ss_pred CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 654 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 654 gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
+|.+.+.-+-.. ++-.|.+...-..|+.|+.. ++.+.+.++-|+-+...+|+.|+.|..|-+
T Consensus 303 ~~s~vfv~~p~~--~~lall~~~sgs~ir~l~~h-~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 303 MDSDVFVLFPND--GSLALLNLLEGSFVRRLSTH-LKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred cccceEEEEecC--CeEEEEEccCceEEEeeecc-cceeeEEeecCchhhhhccccCCccccccc
Confidence 444433333222 34457778888899999999 888899999999999999999999999986
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-24 Score=198.00 Aligned_cols=276 Identities=20% Similarity=0.290 Sum_probs=208.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
..+.|.+|+|+|....+++++|.||+||+|++...... .-+....|.++|.+++|+.+|..+++|+.|+.+++||+..
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~--~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL--VPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcc--cchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC
Confidence 56789999999977778889999999999999863222 2233368999999999999999999999999999999973
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCC-CcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTE-SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
+ .+..+..|.++|.++.|-+.. ...|++|+.|++|++||++... .+....-..+++++
T Consensus 104 ---~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~-----------------pv~t~~LPeRvYa~ 162 (347)
T KOG0647|consen 104 ---G-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN-----------------PVATLQLPERVYAA 162 (347)
T ss_pred ---C-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC-----------------eeeeeeccceeeeh
Confidence 3 677788899999999998753 2389999999999999999763 23333333445555
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDN 556 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (812)
..-. +.+++++++.++.+|...+..........+-.-.+++++..++..+..+++-.+...+..+ .-.+
T Consensus 163 Dv~~--pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~i-d~~~-------- 231 (347)
T KOG0647|consen 163 DVLY--PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYI-DDPN-------- 231 (347)
T ss_pred hccC--ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEec-CCCC--------
Confidence 4433 3788888999999998877666555555555668999999999888877766553222221 1100
Q ss_pred ccccccccCCCCCCccccCCCccceEEeccc---------ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCC
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHR---------GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDD 627 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~ 627 (812)
+.....++-|+ -.|++++|+|.-..|+++ |.||++.+||-+...
T Consensus 232 --------------------~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTa--GsDGtf~FWDkdar~----- 284 (347)
T KOG0647|consen 232 --------------------PKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTA--GSDGTFSFWDKDART----- 284 (347)
T ss_pred --------------------ccCceeEEEeccCCCCCCceEEecceEeecccceEEEe--cCCceEEEecchhhh-----
Confidence 01122333333 268889999999999998 899999999998775
Q ss_pred cccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEec
Q psy4510 628 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~ 675 (812)
.+++...|..+|++.+|+. +|.++|-+
T Consensus 285 --------------------kLk~s~~~~qpItcc~fn~-~G~ifaYA 311 (347)
T KOG0647|consen 285 --------------------KLKTSETHPQPITCCSFNR-NGSIFAYA 311 (347)
T ss_pred --------------------hhhccCcCCCccceeEecC-CCCEEEEE
Confidence 4666778999999999999 67776654
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-25 Score=212.17 Aligned_cols=243 Identities=20% Similarity=0.331 Sum_probs=197.2
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccc-----------------cccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQV-----------------DQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAE 249 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~-----------------~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~v 249 (812)
.|+++|.|+.|..|.|||+.-...... ......+|+..|.+|+|+..- ..||+|+.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 578999999999999999874322110 111234799999999998765 47889999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
||+.++ +|..++..|.+.|.+++|+|..+..|++|+.|++|.+.|.+.... ....-...+.|..++|.|
T Consensus 271 WD~~~g-------~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~----s~~~wk~~g~VEkv~w~~ 339 (463)
T KOG0270|consen 271 WDVDTG-------KPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN----SGKEWKFDGEVEKVAWDP 339 (463)
T ss_pred EEcCCC-------CcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc----cCceEEeccceEEEEecC
Confidence 999996 899999999999999999999999999999999999999996442 222222567899999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
...+.++++..||+|+-+|+|.. ..++.++ .+|...|.+|++++..+ ++++++.|+.|++|++.... .+.+....
T Consensus 340 ~se~~f~~~tddG~v~~~D~R~~--~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~-~~~v~~~~ 415 (463)
T KOG0270|consen 340 HSENSFFVSTDDGTVYYFDIRNP--GKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS-PKSVKEHS 415 (463)
T ss_pred CCceeEEEecCCceEEeeecCCC--CCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecCCC-Cccccccc
Confidence 99989999999999999999964 3678888 89999999999998876 89999999999999997422 11222211
Q ss_pred cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 409 ~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..-+...|.++.|+...+++.||..+.+++||+.+..
T Consensus 416 ~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 416 FKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred ccccceeecccCCCcceEEEecCccceEEEeecccCh
Confidence 1223467788889888899999999999999998774
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=216.51 Aligned_cols=290 Identities=13% Similarity=0.163 Sum_probs=233.1
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccc--cCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP--LGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~--l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
.+.+..+ .|-.-|.+++.|. ..+.+.|||. |.|+|||+...... ..... .....+-|+++.+.|||+.|++|+.
T Consensus 410 arq~~tL-~HGEvVcAvtIS~-~trhVyTgGk-gcVKVWdis~pg~k-~PvsqLdcl~rdnyiRSckL~pdgrtLivGGe 485 (705)
T KOG0639|consen 410 ARQINTL-AHGEVVCAVTISN-PTRHVYTGGK-GCVKVWDISQPGNK-SPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGE 485 (705)
T ss_pred HHhhhhh-ccCcEEEEEEecC-CcceeEecCC-CeEEEeeccCCCCC-CccccccccCcccceeeeEecCCCceEEeccc
Confidence 3567777 7888888899998 9999999996 79999999875421 12222 2345678999999999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
-.++.|||+... ..+....+..-.-..++|+.+||. ++.+++..||.|.|||+.+.. ..+.|.||.+.+.
T Consensus 486 astlsiWDLAap-----TprikaeltssapaCyALa~spDa-kvcFsccsdGnI~vwDLhnq~----~VrqfqGhtDGas 555 (705)
T KOG0639|consen 486 ASTLSIWDLAAP-----TPRIKAELTSSAPACYALAISPDA-KVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGAS 555 (705)
T ss_pred cceeeeeeccCC-----CcchhhhcCCcchhhhhhhcCCcc-ceeeeeccCCcEEEEEcccce----eeecccCCCCCce
Confidence 999999999874 122223333334568899999998 788888899999999999876 7899999999999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
||..+++|.+ |-+|+-|.+||.||+|.+. .+.. ....+.|.++.++|++.+++.|-.++.+.|.... +..
T Consensus 556 cIdis~dGtk-lWTGGlDntvRcWDlregr---qlqq--hdF~SQIfSLg~cP~~dWlavGMens~vevlh~s----kp~ 625 (705)
T KOG0639|consen 556 CIDISKDGTK-LWTGGLDNTVRCWDLREGR---QLQQ--HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTS----KPE 625 (705)
T ss_pred eEEecCCCce-eecCCCccceeehhhhhhh---hhhh--hhhhhhheecccCCCccceeeecccCcEEEEecC----Ccc
Confidence 9999999996 9999999999999999543 2222 2346789999999999999999999999998885 444
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
...+..|...|.++.|.+.| +++++.+.|+.+..|....+ ..+|.......|.++.++.+..
T Consensus 626 kyqlhlheScVLSlKFa~cG-kwfvStGkDnlLnawrtPyG-----------------asiFqskE~SsVlsCDIS~ddk 687 (705)
T KOG0639|consen 626 KYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYG-----------------ASIFQSKESSSVLSCDISFDDK 687 (705)
T ss_pred ceeecccccEEEEEEecccC-ceeeecCchhhhhhccCccc-----------------cceeeccccCcceeeeeccCce
Confidence 56677799999999999997 69999999999999998877 4556666667899999999875
Q ss_pred CEEEEEeCC-CeEEEE
Q psy4510 484 GTIISTANS-GFNIFR 498 (812)
Q Consensus 484 ~~~~~~~~~-~~~~~~ 498 (812)
++++++.+ ...+|.
T Consensus 688 -yIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 688 -YIVTGSGDKKATVYE 702 (705)
T ss_pred -EEEecCCCcceEEEE
Confidence 44444444 555553
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-24 Score=195.35 Aligned_cols=316 Identities=19% Similarity=0.348 Sum_probs=232.9
Q ss_pred ccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhccc
Q psy4510 78 EAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKK 157 (812)
Q Consensus 78 ~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 157 (812)
.++.+||-...+|... +..+ .|+.+|+..+... |.|.|+++. ++.. |
T Consensus 40 ~Y~ap~~lya~~Ws~~----~~~~----~rla~gS~~Ee~~-Nkvqiv~ld------------------~~s~--e---- 86 (364)
T KOG0290|consen 40 TYNAPWPLYAMNWSVR----PDKK----FRLAVGSFIEEYN-NKVQIVQLD------------------EDSG--E---- 86 (364)
T ss_pred EecCCCceeeeccccC----CCcc----eeEEEeeeccccC-CeeEEEEEc------------------cCCC--c----
Confidence 5568999999999532 2222 4899999988765 999999863 0000 1
Q ss_pred CCCCCCCCCCCccCcCCCCCceEEEEeCCCCC-----CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEc
Q psy4510 158 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP-----GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS 232 (812)
Q Consensus 158 ~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~-----~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s 232 (812)
...-..+ .|.-+++.+.|.| +. ++|||.+. .+|+|.+...+.
T Consensus 87 --------~~~~a~f-d~~YP~tK~~wiP-d~~g~~pdlLATs~D--~LRlWri~~ee~--------------------- 133 (364)
T KOG0290|consen 87 --------LVEDANF-DHPYPVTKLMWIP-DSKGVYPDLLATSSD--FLRLWRIGDEES--------------------- 133 (364)
T ss_pred --------eeccCCC-CCCCCccceEecC-CccccCcchhhcccC--eEEEEeccCcCC---------------------
Confidence 1112225 7888999999999 44 58888875 799997764321
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 312 (812)
+...-+. +.+ ..-..+..++++..|+.-.++++.+++-|-+..|||++++.... ..
T Consensus 134 ---~~~~~~~---------L~~-----------~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~-vk 189 (364)
T KOG0290|consen 134 ---RVELQSV---------LNN-----------NKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGT-VK 189 (364)
T ss_pred ---ceehhhh---------hcc-----------CcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccc-ee
Confidence 1000000 000 01123556889999999888999999999999999999873211 24
Q ss_pred ccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCC-CcE
Q psy4510 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDD-GCI 390 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d-g~i 390 (812)
..+..|...|.+++|...+..+||+++.||+||+||+|.......+..- .....+...++|++... ++|+-..| ..|
T Consensus 190 TQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~-p~~~~pLlRLswnkqDpnymATf~~dS~~V 268 (364)
T KOG0290|consen 190 TQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYED-PSPSTPLLRLSWNKQDPNYMATFAMDSNKV 268 (364)
T ss_pred eEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecC-CCCCCcceeeccCcCCchHHhhhhcCCceE
Confidence 5678899999999999999899999999999999999976655444433 22366788999999875 77765544 579
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ 470 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (812)
.|.|+|. +..++..+++|++.|++|+|.|..+..|+++|.|.++.+||+...... ....|.+... ..
T Consensus 269 ~iLDiR~--P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~---------~~~dPilay~--a~ 335 (364)
T KOG0290|consen 269 VILDIRV--PCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRE---------NGEDPILAYT--AG 335 (364)
T ss_pred EEEEecC--CCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccccc---------CCCCchhhhh--cc
Confidence 9999998 678999999999999999999998899999999999999999876320 1112222222 45
Q ss_pred CceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 471 KEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 471 ~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
.+|..++|++..+.-++.+....+.+.
T Consensus 336 ~EVNqi~Ws~~~~Dwiai~~~kkleiL 362 (364)
T KOG0290|consen 336 GEVNQIQWSSSQPDWIAICFGKKLEIL 362 (364)
T ss_pred ceeeeeeecccCCCEEEEEecCeeeEE
Confidence 689999999998888888877776654
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=229.02 Aligned_cols=249 Identities=19% Similarity=0.295 Sum_probs=209.3
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
+..+.|+....++|||++..|.|.+||+..... ......+..|+..|.++.|++.. .+|++|+.||+|++||++..
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~r-nk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~-- 166 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIR-NKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSK-- 166 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCcccc-chhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecc--
Confidence 445778766889999999999999999987421 11556788999999999999875 57789999999999999984
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
+...++.+....|..++|+|.....++++...|.+++||++.... ....+.+|.++|.|+.|+|++. +||+
T Consensus 167 -----~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r---~~~k~~AH~GpV~c~nwhPnr~-~lAT 237 (839)
T KOG0269|consen 167 -----KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDR---CEKKLTAHNGPVLCLNWHPNRE-WLAT 237 (839)
T ss_pred -----cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchh---HHHHhhcccCceEEEeecCCCc-eeee
Confidence 677788888899999999998878999999999999999998765 5677899999999999999776 7999
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeC--CCcEEEEecCCCCCCCceEEcccCCCCE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGD--DGCIHVWDLRRFKKGSSVATFKHHTAPV 414 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v 414 (812)
|+.|+.|+|||..... ...+.++ ....+|.++.|-|..+ .|++++. |-.|+|||+|. +--|..++..|+..+
T Consensus 238 GGRDK~vkiWd~t~~~-~~~~~tI--nTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR--PYIP~~t~~eH~~~v 312 (839)
T KOG0269|consen 238 GGRDKMVKIWDMTDSR-AKPKHTI--NTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR--PYIPYATFLEHTDSV 312 (839)
T ss_pred cCCCccEEEEeccCCC-ccceeEE--eecceeeeeeeccCccchhhhhhccccceEEEEeecc--ccccceeeeccCccc
Confidence 9999999999997543 3334444 3457899999999886 7777764 78899999997 667889999999999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.++|...+...|.+++.|++|..-.+...
T Consensus 313 t~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 313 TGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred cceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 999998766678999999998876655544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-23 Score=192.87 Aligned_cols=272 Identities=17% Similarity=0.204 Sum_probs=211.2
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|..+.|+| ..+.|+.++-||.+++|++... ..+....|..++.+++|.+ ...+++|+.||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~-~~~~LLvssWDgslrlYdv~~~-----~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~- 84 (323)
T KOG1036|consen 13 EDGISSVKFSP-SSSDLLVSSWDGSLRLYDVPAN-----SLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT- 84 (323)
T ss_pred hhceeeEEEcC-cCCcEEEEeccCcEEEEeccch-----hhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecC-
Confidence 46799999999 7777777779999999999876 3455667999999999987 45689999999999999998
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
.+...+..|...|.++.+++.. +.+++|+.|++|++||.+... ....+. ....|.++... +. .|
T Consensus 85 -------~~~~~igth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~----~~~~~d-~~kkVy~~~v~--g~-~L 148 (323)
T KOG1036|consen 85 -------GNEDQIGTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKV----VVGTFD-QGKKVYCMDVS--GN-RL 148 (323)
T ss_pred -------CcceeeccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccc----cccccc-cCceEEEEecc--CC-EE
Confidence 4456677899999999999876 899999999999999998643 222222 33478888765 34 58
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-CCCCceEEcccCCC--
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-KKGSSVATFKHHTA-- 412 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~h~~-- 412 (812)
+.|+.+..|.+||+|...... ......-.-.+.|+++.|++.=+++++-||.|.+=.+... .....-..|+.|..
T Consensus 149 vVg~~~r~v~iyDLRn~~~~~--q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~ 226 (323)
T KOG1036|consen 149 VVGTSDRKVLIYDLRNLDEPF--QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSE 226 (323)
T ss_pred EEeecCceEEEEEcccccchh--hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeeccc
Confidence 899999999999999654332 2222344567899999998888889999999988666531 11234456677743
Q ss_pred -------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 413 -------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 413 -------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
+|.+|+|+|-. ..|+|||.||.|.+||+...+ .+...+.....|..++|+.++..+
T Consensus 227 ~~~~~~yPVNai~Fhp~~-~tfaTgGsDG~V~~Wd~~~rK----------------rl~q~~~~~~SI~slsfs~dG~~L 289 (323)
T KOG1036|consen 227 KDTEIIYPVNAIAFHPIH-GTFATGGSDGIVNIWDLFNRK----------------RLKQLAKYETSISSLSFSMDGSLL 289 (323)
T ss_pred CCceEEEEeceeEecccc-ceEEecCCCceEEEccCcchh----------------hhhhccCCCCceEEEEeccCCCeE
Confidence 79999999984 699999999999999998876 344445555679999999998655
Q ss_pred EEEEe
Q psy4510 486 IISTA 490 (812)
Q Consensus 486 ~~~~~ 490 (812)
.++++
T Consensus 290 Aia~s 294 (323)
T KOG1036|consen 290 AIASS 294 (323)
T ss_pred EEEec
Confidence 55544
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-23 Score=190.09 Aligned_cols=282 Identities=17% Similarity=0.212 Sum_probs=205.6
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
...|.++.|+|.+ +.|+.++.||++++|++.... ......|..++.+++|.+... +++|+.||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~-~~LLvssWDgslrlYdv~~~~-----l~~~~~~~~plL~c~F~d~~~--~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSS-SDLLVSSWDGSLRLYDVPANS-----LKLKFKHGAPLLDCAFADEST--IVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcC-CcEEEEeccCcEEEEeccchh-----hhhheecCCceeeeeccCCce--EEEeccCceEEEEEecC
Confidence 5789999999887 778888899999999998875 333345899999999999664 89999999999999986
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
++. ..+ ..|..+|.||.+++-...+++|+.|++|++||.|+ ...+..+.. ...|.++.... ..|+.|+
T Consensus 85 ~~~----~~i-gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~---~~~~~~~d~-~kkVy~~~v~g---~~LvVg~ 152 (323)
T KOG1036|consen 85 GNE----DQI-GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN---KVVVGTFDQ-GKKVYCMDVSG---NRLVVGT 152 (323)
T ss_pred Ccc----eee-ccCCCceEEEEeeccCCeEEEcccCccEEEEeccc---ccccccccc-CceEEEEeccC---CEEEEee
Confidence 542 233 68999999999998888999999999999999994 344444443 34788888763 5799999
Q ss_pred CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEee
Q psy4510 432 ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIH 511 (812)
Q Consensus 432 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (812)
.|..|.+||+++..... ......-.-.+.+++.-|++.+.++++-++++.+ ...+..+..
T Consensus 153 ~~r~v~iyDLRn~~~~~--------------q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVav-E~~d~s~~~----- 212 (323)
T KOG1036|consen 153 SDRKVLIYDLRNLDEPF--------------QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAV-EYFDDSEEA----- 212 (323)
T ss_pred cCceEEEEEcccccchh--------------hhccccceeEEEEEEEecCCCceEEEeecceEEE-EccCCchHH-----
Confidence 99999999999885421 0001111236889999998877777777666433 211111000
Q ss_pred cCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEE
Q psy4510 512 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCIN 591 (812)
Q Consensus 512 ~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 591 (812)
+.+-..+..|+... . +... --+|+
T Consensus 213 --~skkyaFkCHr~~~--------~---------------------------------------~~~~-------~yPVN 236 (323)
T KOG1036|consen 213 --QSKKYAFKCHRLSE--------K---------------------------------------DTEI-------IYPVN 236 (323)
T ss_pred --hhhceeEEeeeccc--------C---------------------------------------CceE-------EEEec
Confidence 00111111222100 0 0000 12899
Q ss_pred EEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe
Q psy4510 592 RVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 671 (812)
Q Consensus 592 ~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~ 671 (812)
+++|+|-...+++| +.||.|.+||+.+.+ .++.+......|.+++|+. +|..
T Consensus 237 ai~Fhp~~~tfaTg--GsDG~V~~Wd~~~rK-------------------------rl~q~~~~~~SI~slsfs~-dG~~ 288 (323)
T KOG1036|consen 237 AIAFHPIHGTFATG--GSDGIVNIWDLFNRK-------------------------RLKQLAKYETSISSLSFSM-DGSL 288 (323)
T ss_pred eeEeccccceEEec--CCCceEEEccCcchh-------------------------hhhhccCCCCceEEEEecc-CCCe
Confidence 99999999999999 999999999999887 4566666677899999999 7888
Q ss_pred EEecCC
Q psy4510 672 LATGDC 677 (812)
Q Consensus 672 las~s~ 677 (812)
||.|+.
T Consensus 289 LAia~s 294 (323)
T KOG1036|consen 289 LAIASS 294 (323)
T ss_pred EEEEec
Confidence 888764
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-23 Score=191.60 Aligned_cols=307 Identities=13% Similarity=0.159 Sum_probs=213.2
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCc
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~ 246 (812)
.+..++||.+.|++++||. +|..|||++.|+.|+||++..-....-......-.-+.-+.++|+||-+-++... ....
T Consensus 78 ~~~~LKgH~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~ 156 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNK 156 (420)
T ss_pred hhhhhhccCCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCE
Confidence 4567789999999999999 9999999999999999998764321111111111223567899999988665544 5667
Q ss_pred eEEeeCCCCCCCCCCC--CC---ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 247 LAEHNKKRGKGPGIPT--PP---LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~--~~---~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
+++|.+........+. .+ +..-+.|+-.+..+-....+ .+|++++.|..|.+|++. ++ .+.........
T Consensus 157 l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~-k~imsas~dt~i~lw~lk-Gq----~L~~idtnq~~ 230 (420)
T KOG2096|consen 157 LCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNA-KYIMSASLDTKICLWDLK-GQ----LLQSIDTNQSS 230 (420)
T ss_pred EEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCc-eEEEEecCCCcEEEEecC-Cc----eeeeecccccc
Confidence 9999876643221111 11 11223456667777776666 799999999999999998 44 34444445556
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCC-----cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-----TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
-+..+.+|+|+ ++++++.--.|++|.+--.. ....+..+ .+|.+.|..++|+++...+++.+.||.++|||..
T Consensus 231 n~~aavSP~GR-Fia~~gFTpDVkVwE~~f~kdG~fqev~rvf~L-kGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 231 NYDAAVSPDGR-FIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSL-KGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred ccceeeCCCCc-EEEEecCCCCceEEEEEeccCcchhhhhhhhee-ccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 67889999999 69999999999999874221 12234455 7999999999999999999999999999999985
Q ss_pred C----CCCCCceEEcc----cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec
Q psy4510 397 R----FKKGSSVATFK----HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 397 ~----~~~~~~~~~~~----~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
- .+....+.... .-.+.-..++.+|.+. .|+.+. ...++++..+.++... . +...
T Consensus 309 VrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~-~lA~s~-gs~l~~~~se~g~~~~-------------~--~e~~ 371 (420)
T KOG2096|consen 309 VRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD-SLAVSF-GSDLKVFASEDGKDYP-------------E--LEDI 371 (420)
T ss_pred ceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc-EEEeec-CCceEEEEcccCccch-------------h--HHHh
Confidence 2 11122232221 1223334899999974 555444 4579999988875421 1 1122
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
+...|.+++|++++. .++++++..+.++....
T Consensus 372 h~~~Is~is~~~~g~-~~atcGdr~vrv~~ntp 403 (420)
T KOG2096|consen 372 HSTTISSISYSSDGK-YIATCGDRYVRVIRNTP 403 (420)
T ss_pred hcCceeeEEecCCCc-EEeeecceeeeeecCCC
Confidence 346899999999974 67777777777776444
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-23 Score=191.15 Aligned_cols=268 Identities=16% Similarity=0.271 Sum_probs=206.9
Q ss_pred CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEEe
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAEH 250 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~vw 250 (812)
.||.+-|.++.|.+ .|+.+|||+.|++|+|||.......-.+......|.+.|..+.|.+ -|+.+|+++.|+++.||
T Consensus 10 s~h~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred cCCcceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 37999999999999 9999999999999999997665544446677889999999999965 58999999999999999
Q ss_pred eCCCC--CCCCCCCCCceEEcCCCCcEEEEEecCCCCC-EEEEEeCCCcEEEEeCCCCCc---cee------ccccccCC
Q psy4510 251 NKKRG--KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGA---WQV------DQKPLVGH 318 (812)
Q Consensus 251 d~~~~--~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~sg~~dg~i~vwd~~~~~~---~~~------~~~~~~~h 318 (812)
.-... +..+.......++....+.|+.+.|.|...+ +||+++.||.++||+...... |.. ...+...+
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~ 168 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKN 168 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccc
Confidence 87322 2222234455667777889999999997544 599999999999998765431 221 11223357
Q ss_pred CCCEEEEEEcCCC--CeEEEEEECC-----CeEEEEECCCCC-cccceeecCCcCCCCeEEEEEcCCC----CEEEEEeC
Q psy4510 319 TNSVEDLQWSPGE--KRVLASCSVD-----LSIRIWDTRVIN-TKSCMLTLPNAHTSDVNVISWNRTE----PLIVSGGD 386 (812)
Q Consensus 319 ~~~v~~~~~~p~~--~~~l~s~~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~----~~l~sg~~ 386 (812)
..+..|+.|+|.. ..+||.|+.+ +.++||...... ....+.++ ..|..+|+.|+|.|+- .+||+++.
T Consensus 169 ~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L-~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 169 KQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAEL-PDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred cCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhc-CCCCCcceeeeeccccCCceeeEEEeec
Confidence 7788999999753 2368887765 588999876543 23344455 6899999999999974 28999999
Q ss_pred CCcEEEEecCCCC-----------------CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFK-----------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|| |+||.++... .-..+..+..|.+.|..+.|+-.| .+|++.|.||.|++|...-.
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG-tiLsStGdDG~VRLWkany~ 320 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG-TILSSTGDDGCVRLWKANYN 320 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee-eEEeecCCCceeeehhhhhh
Confidence 99 9999997311 012455678899999999999987 69999999999999987654
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-21 Score=207.23 Aligned_cols=466 Identities=14% Similarity=0.149 Sum_probs=301.7
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC---cEEEeeCCCceEEeeCCCCCC
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT---ALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~---~l~s~~~d~~i~vwd~~~~~~ 257 (812)
...||+ +++.++.... ..|.||...++. +...+.+|..++..+.+.|... ++.+++.+|.|++||...+
T Consensus 21 ~avfSn-D~k~l~~~~~-~~V~VyS~~Tg~----~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~-- 92 (792)
T KOG1963|consen 21 PAVFSN-DAKFLFLCTG-NFVKVYSTATGE----CITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDG-- 92 (792)
T ss_pred cccccc-CCcEEEEeeC-CEEEEEecchHh----hhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCc--
Confidence 356888 8888887775 489999999988 7779999999999999987664 6779999999999999875
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCC---CCEEEEEeCCCc------------EEEEeCCCCCcceeccccccCCCCCE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTE---PGVLATGDCKRN------------IHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~---~~~l~sg~~dg~------------i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
..+.++..+ .++.++.+.|.- +..+..+..+.. ++-+.+.+.. ......+..|.. -
T Consensus 93 -----~Llkt~~~~-~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~--~~~~d~~~~~~~-~ 163 (792)
T KOG1963|consen 93 -----ELLKTFDNN-LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFD--SAKGDFLKEHQE-P 163 (792)
T ss_pred -----EEEEEEecC-CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeecc--ccchhhhhhhcC-C
Confidence 555555432 344444443311 011112222211 1111111110 001111222322 4
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC-CCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR-FKKG 401 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~ 401 (812)
..+.+++.+. +.....+..+.+|.........+.......|.-.++|.+++|+++++|+|..||.|.+|.--. ....
T Consensus 164 ~~I~~~~~ge--~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~ 241 (792)
T KOG1963|consen 164 KSIVDNNSGE--FKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDS 241 (792)
T ss_pred ccEEEcCCce--EEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccccccc
Confidence 6778888886 455556678999998754323333334456777799999999999999999999999996532 1233
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.....+..|...|++++|+++| .+|++||..+.+.+|.+.+++. .|...-..+|..+.++|+
T Consensus 242 ~t~t~lHWH~~~V~~L~fS~~G-~~LlSGG~E~VLv~Wq~~T~~k-----------------qfLPRLgs~I~~i~vS~d 303 (792)
T KOG1963|consen 242 ETCTLLHWHHDEVNSLSFSSDG-AYLLSGGREGVLVLWQLETGKK-----------------QFLPRLGSPILHIVVSPD 303 (792)
T ss_pred ccceEEEecccccceeEEecCC-ceEeecccceEEEEEeecCCCc-----------------ccccccCCeeEEEEEcCC
Confidence 4567788999999999999998 5999999999999999998842 233333568999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccc
Q psy4510 482 LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELE 561 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 561 (812)
+....+..++..+.+....+...... |..+...
T Consensus 304 s~~~sl~~~DNqI~li~~~dl~~k~t---------Isgi~~~-------------------------------------- 336 (792)
T KOG1963|consen 304 SDLYSLVLEDNQIHLIKASDLEIKST---------ISGIKPP-------------------------------------- 336 (792)
T ss_pred CCeEEEEecCceEEEEeccchhhhhh---------ccCccCC--------------------------------------
Confidence 88777777776666654332211110 0000000
Q ss_pred cccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCC
Q psy4510 562 DDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641 (812)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 641 (812)
......+..+-.+.+++.|.-+.++.. +..|.|++||+.+...... ......+...+.
T Consensus 337 -----------------~~~~k~~~~~l~t~~~idpr~~~~vln--~~~g~vQ~ydl~td~~i~~--~~v~~~n~~~~~- 394 (792)
T KOG1963|consen 337 -----------------TPSTKTRPQSLTTGVSIDPRTNSLVLN--GHPGHVQFYDLYTDSTIYK--LQVCDENYSDGD- 394 (792)
T ss_pred -----------------CccccccccccceeEEEcCCCCceeec--CCCceEEEEeccccceeee--EEEEeecccCCc-
Confidence 000011122345567788855556665 7899999999988753210 000000000000
Q ss_pred CCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecC--------CC--ceEEEEecCC---------------Ccee-EEE
Q psy4510 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD--------CK--RNIHIWTPRE---------------AGAW-SVY 695 (812)
Q Consensus 642 ~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s--------~D--g~v~iWd~~~---------------~~~~-~~~ 695 (812)
.-+.-.+++++.+. .+.+++|.- .| -.+|+|.... +... ..+
T Consensus 395 -----------~n~~v~itav~~~~-~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~ 462 (792)
T KOG1963|consen 395 -----------VNIQVGITAVARSR-FGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATI 462 (792)
T ss_pred -----------ceeEEeeeeehhhc-cceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEE
Confidence 02334688888888 588888863 23 3678898765 1112 222
Q ss_pred EecC-CCCEEEeecCCCeEEEeecCCCC-------CcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 696 LYTN-RFGVLATGDCKRNIHIWTPREAG-------AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 696 ~~s~-dg~~lasgs~dg~i~iwd~~~~~-------~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+.++ .....++++.||.++||-+...+ .|. +...-..|..++++++||.||. |+++|.|++|.|||...
T Consensus 463 ~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~-c~~i~sy~k~~i~a~~fs~dGs--lla~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 463 FLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWT-CKAIGSYHKTPITALCFSQDGS--LLAVSFDDTITIWDYDT 539 (792)
T ss_pred EecCcccceeEEeccCCeEEEEEEecccccCcCccceE-EeeeeccccCcccchhhcCCCc--EEEEecCCEEEEecCCC
Confidence 2333 33388999999999999983322 232 3333345889999999999997 88899999999999877
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=202.76 Aligned_cols=291 Identities=17% Similarity=0.224 Sum_probs=221.2
Q ss_pred CCCceEEEEeCCCCC-CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeC
Q psy4510 175 HLTEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNK 252 (812)
Q Consensus 175 h~~~i~~~~~sp~~~-~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~ 252 (812)
|..+|++++|+|... +++|+|..-|.|-+||+.+.++-......+..|..+|.+|.|+|.. .++++.+.||+|+.-|+
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~ 264 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDF 264 (498)
T ss_pred cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeeee
Confidence 568999999999655 6899999999999999975554444667788999999999999976 57889999999999999
Q ss_pred CCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 253 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
++. ....+.++......+..+.|+... ..++.|+.=|...+||.+..+. ....+.-|...|..++++|-.+
T Consensus 265 ~~~-----i~e~v~s~~~d~~~fs~~d~~~e~-~~vl~~~~~G~f~~iD~R~~~s---~~~~~~lh~kKI~sv~~NP~~p 335 (498)
T KOG4328|consen 265 EGN-----ISEEVLSLDTDNIWFSSLDFSAES-RSVLFGDNVGNFNVIDLRTDGS---EYENLRLHKKKITSVALNPVCP 335 (498)
T ss_pred cch-----hhHHHhhcCccceeeeeccccCCC-ccEEEeecccceEEEEeecCCc---cchhhhhhhcccceeecCCCCc
Confidence 986 345555665455677889999887 5666666667999999998874 3455666888999999999999
Q ss_pred eEEEEEECCCeEEEEECCCCCcccc-eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceEEcccC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSC-MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHH 410 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h 410 (812)
.+||+||.|++++|||+|....+.. +... ..|...|++..|+|.+-.|+|.+.|..|+|||..-+.. ..++.++. |
T Consensus 336 ~~laT~s~D~T~kIWD~R~l~~K~sp~lst-~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-H 413 (498)
T KOG4328|consen 336 WFLATASLDQTAKIWDLRQLRGKASPFLST-LPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-H 413 (498)
T ss_pred hheeecccCcceeeeehhhhcCCCCcceec-ccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-c
Confidence 9999999999999999997765553 3333 58999999999999988899999999999999842111 22333332 2
Q ss_pred C----CC--EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeE-EEEcCCC
Q psy4510 411 T----AP--VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKE-LHWHPQL 482 (812)
Q Consensus 411 ~----~~--v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~-~~~~p~~ 482 (812)
. .. .....|.|+. .++++|-.-..|-|+|-..++. +...|.... .|.+ ..|||..
T Consensus 414 n~~t~RwlT~fKA~W~P~~-~li~vg~~~r~IDv~~~~~~q~----------------v~el~~P~~~tI~~vn~~HP~~ 476 (498)
T KOG4328|consen 414 NNRTGRWLTPFKAAWDPDY-NLIVVGRYPRPIDVFDGNGGQM----------------VCELHDPESSTIPSVNEFHPMR 476 (498)
T ss_pred cCcccccccchhheeCCCc-cEEEEeccCcceeEEcCCCCEE----------------eeeccCccccccccceeecccc
Confidence 1 11 2346799975 7999999988999999887731 222232222 3443 5899987
Q ss_pred CCEEEEEeCCC
Q psy4510 483 PGTIISTANSG 493 (812)
Q Consensus 483 ~~~~~~~~~~~ 493 (812)
..+++++...|
T Consensus 477 ~~~~aG~~s~G 487 (498)
T KOG4328|consen 477 DTLAAGGNSSG 487 (498)
T ss_pred cceeccCCccc
Confidence 54554444444
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-25 Score=227.01 Aligned_cols=246 Identities=24% Similarity=0.464 Sum_probs=212.3
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
+.+++.....-.++||+. +.+..|...|.++..-..++.+++|+.+..+.+|.+... .++..+
T Consensus 4 ~~~~m~~~~~t~Lr~~~~----------~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp-------~~i~S~ 66 (825)
T KOG0267|consen 4 MEFLMKTKRATKLRVWDT----------REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP-------NAITSL 66 (825)
T ss_pred ccccceeeeeeccccccc----------hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCC-------chhhee
Confidence 334445545566788854 456678889999888788899999999999999998763 677789
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
.+|..+|.+|.|++.. .+|++|+.+|+|++||+.... ..+.+.+|...+..+.|+|.+. ++++|+.|+.+++||
T Consensus 67 ~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk----~vrtLtgh~~~~~sv~f~P~~~-~~a~gStdtd~~iwD 140 (825)
T KOG0267|consen 67 TGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAK----IVRTLTGHLLNITSVDFHPYGE-FFASGSTDTDLKIWD 140 (825)
T ss_pred eccCCcceeeecCcch-hhhcccccCCceeeeehhhhh----hhhhhhccccCcceeeeccceE-Eeccccccccceehh
Confidence 9999999999999998 899999999999999999887 6789999999999999999999 589999999999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
++ ...|...+ .+|...|.++.|+|+|++++.|+.|..++|||++ .++.+..|..|.+.|.++.|+|.+ .+++
T Consensus 141 ~R---k~Gc~~~~-~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~---agk~~~ef~~~e~~v~sle~hp~e-~Lla 212 (825)
T KOG0267|consen 141 IR---KKGCSHTY-KSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLT---AGKLSKEFKSHEGKVQSLEFHPLE-VLLA 212 (825)
T ss_pred hh---ccCceeee-cCCcceeEEEeecCCCceeeccCCcceeeeeccc---ccccccccccccccccccccCchh-hhhc
Confidence 99 67788888 6699999999999999999999999999999998 578899999999999999999986 7999
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec-CCCceeEEEEcCCC
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL-GQKEIKELHWHPQL 482 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~ 482 (812)
+||.|++|++||+++. +++.... ....|.+..|+|++
T Consensus 213 ~Gs~d~tv~f~dletf-----------------e~I~s~~~~~~~v~~~~fn~~~ 250 (825)
T KOG0267|consen 213 PGSSDRTVRFWDLETF-----------------EVISSGKPETDGVRSLAFNPDG 250 (825)
T ss_pred cCCCCceeeeecccee-----------------EEeeccCCccCCceeeeecCCc
Confidence 9999999999999866 2222211 13478999999985
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=212.56 Aligned_cols=310 Identities=23% Similarity=0.343 Sum_probs=212.7
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcc--cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTK--SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
.|+..++|+.+..||.|.++|.+..... .+....+.+|...|..+.|-|....|++++.|.++++||+.. ...+.
T Consensus 60 ~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~---s~l~G 136 (720)
T KOG0321|consen 60 APNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKT---SRLVG 136 (720)
T ss_pred CCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecc---ceeec
Confidence 3456679999999999999998753322 222344579999999999999555999999999999999984 44444
Q ss_pred E--cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 406 T--FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 406 ~--~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
. +.+|.+.|.+++|+|.++.+|++|+.||.|.|||++.......+.....
T Consensus 137 ~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~---------------------------- 188 (720)
T KOG0321|consen 137 GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNR---------------------------- 188 (720)
T ss_pred ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhh----------------------------
Confidence 4 8899999999999999999999999999999999987642111100000
Q ss_pred CEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccc
Q psy4510 484 GTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDD 563 (812)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 563 (812)
++...+..+ .|. ...
T Consensus 189 ------------~~~~~n~~p------------------tps---kp~-------------------------------- 203 (720)
T KOG0321|consen 189 ------------IYGRHNTAP------------------TPS---KPL-------------------------------- 203 (720)
T ss_pred ------------hhccccCCC------------------CCC---chh--------------------------------
Confidence 000000000 000 000
Q ss_pred cCCCCCCccccCCCccceEEecccceEEE---EEEeccCCeEEEEeecCcceEEEEeccccccccC-CcccccccccccC
Q psy4510 564 ESEGSGDEDRRKDPVMNSYFIRHRGCINR---VRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD-DPFQLAEHNKKRG 639 (812)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~-~~~~~~~~~~~~~ 639 (812)
..-......+...|.+ +.+..|...|+++. ..|+.|+|||+........ .+.
T Consensus 204 -------------~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSag-a~D~~iKVWDLRk~~~~~r~ep~---------- 259 (720)
T KOG0321|consen 204 -------------KKRIRKWKAASNTIFSSVTVVLFKDESTLASAG-AADSTIKVWDLRKNYTAYRQEPR---------- 259 (720)
T ss_pred -------------hccccccccccCceeeeeEEEEEeccceeeecc-CCCcceEEEeecccccccccCCC----------
Confidence 0000111222223333 44557778888873 3599999999998753211 000
Q ss_pred CCCCCCCCCeeeecCC---CCceEEEEeCCCCCCeEEecCCCceEEEEecCC----------CceeE----EEEecCCCC
Q psy4510 640 KGPGIPTPPLFSFSGH---LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE----------AGAWS----VYLYTNRFG 702 (812)
Q Consensus 640 ~~~~~~~~~~~~~~gh---~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~----------~~~~~----~~~~s~dg~ 702 (812)
....+..| .-.++++.....+..++|++. |+.|.+|++.+ |.... ....+||+.
T Consensus 260 --------~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt-D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~ 330 (720)
T KOG0321|consen 260 --------GSDKYPTHSKRSVGQVNLILDSSGTYLFASCT-DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDC 330 (720)
T ss_pred --------cccCccCcccceeeeEEEEecCCCCeEEEEec-CCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCc
Confidence 11112223 235677777763444555555 99999999987 22221 224789999
Q ss_pred EEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+|++|+.|...++|.+.+... ....+.||+-.|++++|.|..-.=+|||+.|.+++||++.++.
T Consensus 331 ~l~SgSsd~~ayiw~vs~~e~---~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 331 SLLSGSSDEQAYIWVVSSPEA---PPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred eEeccCCCcceeeeeecCccC---ChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence 999999999999999988765 6678899999999999987543238999999999999997776
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-22 Score=186.73 Aligned_cols=268 Identities=18% Similarity=0.204 Sum_probs=199.6
Q ss_pred EEEecCCCcEEEEccCCCC--------cccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCC
Q psy4510 192 LATGDCKRNIHIWTPREAG--------AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 263 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~--------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 263 (812)
|++|++...|.=+++.-.. ........+..|.++|+++|.+ +.++|+|+.|-+|+|||+... .
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~-------~ 74 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKR-------K 74 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccch-------h
Confidence 5566665555444443221 1122345678999999999976 899999999999999999985 7
Q ss_pred CceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 264 PLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 264 ~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.+..+..|.+.|++|.|.+.- ...|++|+.||.|.+|+...-. ....+++|.+.|++++.+|.++ +.++.+.|+
T Consensus 75 qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~----~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~ 149 (362)
T KOG0294|consen 75 QLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWE----LLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQ 149 (362)
T ss_pred hhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeE----EeeeecccccccceeEecCCCc-eEEEEcCCc
Confidence 788889999999999999875 1379999999999999987654 7889999999999999999999 788999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.++.||+-.+....+ ..+ .+ ..+.+.|+|.|.+++.++.++ |-+|.+.+ . .+.........+.++.|..
T Consensus 150 ~lr~WNLV~Gr~a~v-~~L--~~--~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~---A-~v~~~i~~~~r~l~~~~l~- 218 (362)
T KOG0294|consen 150 VLRTWNLVRGRVAFV-LNL--KN--KATLVSWSPQGDHFVVSGRNK-IDIYQLDN---A-SVFREIENPKRILCATFLD- 218 (362)
T ss_pred eeeeehhhcCcccee-ecc--CC--cceeeEEcCCCCEEEEEeccE-EEEEeccc---H-hHhhhhhccccceeeeecC-
Confidence 999999976543322 222 22 234499999999888888764 89999863 2 2222222335577777764
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC-CCCCEEEEEeCCCeEEEEeCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP-QLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~~~~~~~~~~~~~~~ 501 (812)
+..|++|+.|+.|.+||..... .+.+...+..+|.++.+-. ....++++.+.+|....|...
T Consensus 219 -~~~L~vG~d~~~i~~~D~ds~~----------------~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~ 281 (362)
T KOG0294|consen 219 -GSELLVGGDNEWISLKDTDSDT----------------PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDID 281 (362)
T ss_pred -CceEEEecCCceEEEeccCCCc----------------cceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcc
Confidence 3589999999999999998753 4445556667899988433 233577777777765555444
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-23 Score=203.82 Aligned_cols=286 Identities=18% Similarity=0.274 Sum_probs=220.2
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
.|..-|.++..|... ..+.||+. |.|+|||+...+. ..+...........|..+...|+|+. |++|+.-.++.|||
T Consensus 417 ~HGEvVcAvtIS~~t-rhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrt-LivGGeastlsiWD 493 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPT-RHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRT-LIVGGEASTLSIWD 493 (705)
T ss_pred ccCcEEEEEEecCCc-ceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCce-EEeccccceeeeee
Confidence 588888889998876 78999986 8899999987643 12222233334568999999999996 88888899999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
+..... .+..-.........+++.+|+.++.+++..||.|.|||+++ ...+..|++|.+.+.||..+++| ..|.
T Consensus 494 LAapTp--rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn---q~~VrqfqGhtDGascIdis~dG-tklW 567 (705)
T KOG0639|consen 494 LAAPTP--RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN---QTLVRQFQGHTDGASCIDISKDG-TKLW 567 (705)
T ss_pred ccCCCc--chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc---ceeeecccCCCCCceeEEecCCC-ceee
Confidence 985422 12211123334577899999999999999999999999994 67899999999999999999997 6899
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
+|+-|++|+.||++..+. +..|.....|.++..+|++.++++.-.++.+.+.....
T Consensus 568 TGGlDntvRcWDlregrq-----------------lqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~sk------- 623 (705)
T KOG0639|consen 568 TGGLDNTVRCWDLREGRQ-----------------LQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSK------- 623 (705)
T ss_pred cCCCccceeehhhhhhhh-----------------hhhhhhhhhheecccCCCccceeeecccCcEEEEecCC-------
Confidence 999999999999998843 33445556788888888887777666555443321110
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccc
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRG 588 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 588 (812)
.-...+..|..
T Consensus 624 ---------------------------------------------------------------------p~kyqlhlheS 634 (705)
T KOG0639|consen 624 ---------------------------------------------------------------------PEKYQLHLHES 634 (705)
T ss_pred ---------------------------------------------------------------------ccceeeccccc
Confidence 11345667888
Q ss_pred eEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCC
Q psy4510 589 CINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 668 (812)
Q Consensus 589 ~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~ 668 (812)
.|.++.|.+.|+++++. +.|+.+..|...-+.. +...+ ....|+++..|- +
T Consensus 635 cVLSlKFa~cGkwfvSt--GkDnlLnawrtPyGas-------------------------iFqsk-E~SsVlsCDIS~-d 685 (705)
T KOG0639|consen 635 CVLSLKFAYCGKWFVST--GKDNLLNAWRTPYGAS-------------------------IFQSK-ESSSVLSCDISF-D 685 (705)
T ss_pred EEEEEEecccCceeeec--CchhhhhhccCccccc-------------------------eeecc-ccCcceeeeecc-C
Confidence 99999999999999998 9999999999987752 22222 345899999999 7
Q ss_pred CCeEEecCCCceEEEEec
Q psy4510 669 PGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 669 ~~~las~s~Dg~v~iWd~ 686 (812)
.++|+|||.|+...||.+
T Consensus 686 dkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 686 DKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ceEEEecCCCcceEEEEE
Confidence 789999999988888765
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-23 Score=207.63 Aligned_cols=303 Identities=23% Similarity=0.320 Sum_probs=212.1
Q ss_pred EEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCcc--eeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 276 FAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAW--QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 276 ~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
++..|++ ....+|+.+..+|.|.++|.....-. .........|...|.++.|.| ++..|++++.|.++++||+..
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~ 131 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKT 131 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeecc
Confidence 3456654 34468999999999999998765421 001345677999999999999 666899999999999999985
Q ss_pred CCcccceee-cCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCC---------------C---------CceE
Q psy4510 352 INTKSCMLT-LPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKK---------------G---------SSVA 405 (812)
Q Consensus 352 ~~~~~~~~~-~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~---------------~---------~~~~ 405 (812)
.. +... +..+|...|.+++|.|..+ .|++|+.||.|.|||+|.... . +.+.
T Consensus 132 s~---l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~ 208 (720)
T KOG0321|consen 132 SR---LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIR 208 (720)
T ss_pred ce---eecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccc
Confidence 43 2222 2379999999999999887 999999999999999984220 0 1112
Q ss_pred EcccCCCCEEE---EEEccCCCcEEEEEEC-CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC---CCceeEEEE
Q psy4510 406 TFKHHTAPVTT---VEWHPTESSTFASGGA-DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG---QKEIKELHW 478 (812)
Q Consensus 406 ~~~~h~~~v~~---v~~~p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~ 478 (812)
..+.+...|.+ +.+..|+ ..||++|. |+.|++||++..... ....|......+.+ ...+.++..
T Consensus 209 k~kA~s~ti~ssvTvv~fkDe-~tlaSaga~D~~iKVWDLRk~~~~--------~r~ep~~~~~~~t~skrs~G~~nL~l 279 (720)
T KOG0321|consen 209 KWKAASNTIFSSVTVVLFKDE-STLASAGAADSTIKVWDLRKNYTA--------YRQEPRGSDKYPTHSKRSVGQVNLIL 279 (720)
T ss_pred ccccccCceeeeeEEEEEecc-ceeeeccCCCcceEEEeecccccc--------cccCCCcccCccCcccceeeeEEEEe
Confidence 22334444444 4455554 58888887 999999999987542 11222233222222 125778888
Q ss_pred cCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccc
Q psy4510 479 HPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNER 558 (812)
Q Consensus 479 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~ 558 (812)
...++.+++++.++.+..|............. + +.+..
T Consensus 280 DssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~------------s----g~~~~-------------------------- 317 (720)
T KOG0321|consen 280 DSSGTYLFASCTDNSIYFYNMRSLSISPVAEF------------S----GKLNS-------------------------- 317 (720)
T ss_pred cCCCCeEEEEecCCcEEEEeccccCcCchhhc------------c----Ccccc--------------------------
Confidence 88889999999988887776544311110000 0 00000
Q ss_pred ccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccccc
Q psy4510 559 ELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKR 638 (812)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 638 (812)
.--..-..+|++.++++| +.|...++|.+.+...
T Consensus 318 -----------------------------sf~vks~lSpd~~~l~Sg--Ssd~~ayiw~vs~~e~--------------- 351 (720)
T KOG0321|consen 318 -----------------------------SFYVKSELSPDDCSLLSG--SSDEQAYIWVVSSPEA--------------- 351 (720)
T ss_pred -----------------------------eeeeeeecCCCCceEecc--CCCcceeeeeecCccC---------------
Confidence 001122468999999999 8999999999988652
Q ss_pred CCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 639 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 639 ~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
+...+.||.-.|++++|.|..-.-+++++.|.+++||++..
T Consensus 352 ---------~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 352 ---------PPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred ---------ChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 56668899999999999996556788889999999999854
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=187.98 Aligned_cols=287 Identities=13% Similarity=0.199 Sum_probs=211.1
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..|+.||+ .|.+||+|+.||.|.|||+.+.. ..+.+.+|..+|++++||++|+.|++++.|..|.+||+..|
T Consensus 26 a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~----iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~g--- 97 (405)
T KOG1273|consen 26 AECCQFSR-WGDYLAVGCANGRVVIYDFDTFR----IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKG--- 97 (405)
T ss_pred cceEEecc-CcceeeeeccCCcEEEEEccccc----hhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCC---
Confidence 78999999 99999999999999999999977 77889999999999999999999999999999999999986
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
.+++.++ -.++|+.+.|+|...+..++.-.+..-.+-++..+.........-........+..|.+.|+ ++++|
T Consensus 98 ----s~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~-yIitG 171 (405)
T KOG1273|consen 98 ----SPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGK-YIITG 171 (405)
T ss_pred ----CceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCC-EEEEe
Confidence 6777776 36899999999987666666655555566666543211100111111112233446889998 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC------CceEEccc--C
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG------SSVATFKH--H 410 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~------~~~~~~~~--h 410 (812)
...|.+.++|..+ ..++..+.......|..+.++..|++|+.-+.|..|+.|+++..... .+.+.++. .
T Consensus 172 tsKGkllv~~a~t---~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVN 248 (405)
T KOG1273|consen 172 TSKGKLLVYDAET---LECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVN 248 (405)
T ss_pred cCcceEEEEecch---heeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHh
Confidence 9999999999984 45666663333478999999999999999999999999998732111 11122211 2
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC-CceeEEEEcCCCCCEEEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~~~~~ 489 (812)
+..-.+++|+.+|..++++......++||.-..+. -+...|+.. ....++.|+|-.+ .+++.
T Consensus 249 k~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs----------------LVKILhG~kgE~l~DV~whp~rp-~i~si 311 (405)
T KOG1273|consen 249 KLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS----------------LVKILHGTKGEELLDVNWHPVRP-IIASI 311 (405)
T ss_pred hhhhhheeecCCccEEEeccccceeEEEEecCCcc----------------eeeeecCCchhheeeccccccee-eeeec
Confidence 33456788999886444555556789999998883 233344444 2588999999865 55566
Q ss_pred eCCCeEEEEe
Q psy4510 490 ANSGFNIFRT 499 (812)
Q Consensus 490 ~~~~~~~~~~ 499 (812)
+.+.+.+|..
T Consensus 312 ~sg~v~iw~~ 321 (405)
T KOG1273|consen 312 ASGVVYIWAV 321 (405)
T ss_pred cCCceEEEEe
Confidence 6666666643
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-22 Score=210.37 Aligned_cols=277 Identities=14% Similarity=0.227 Sum_probs=218.8
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCC-CcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-GAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~-~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
+|++.-+.++|.| +|.+|.|++.||.|++|+.... +. -.++.-+...|.+++. .+.+|++++.+++|.+|.+
T Consensus 11 aht~G~t~i~~d~-~gefi~tcgsdg~ir~~~~~sd~e~----P~ti~~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 11 AHTGGLTLICYDP-DGEFICTCGSDGDIRKWKTNSDEEE----PETIDISGELVSSIAC--YSNHFLTGSEQNTVLRYKF 83 (933)
T ss_pred hccCceEEEEEcC-CCCEEEEecCCCceEEeecCCcccC----CchhhccCceeEEEee--cccceEEeeccceEEEeeC
Confidence 6888889999999 9999999999999999988776 32 2233337778888774 4559999999999999999
Q ss_pred CCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 253 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
..+ ..-..+..-+-++.+++++.+| .++|.|+.|-.|++-++.... ....+.+|.++|.++.|+|.+.
T Consensus 84 ps~-------~~~~iL~Rftlp~r~~~v~g~g-~~iaagsdD~~vK~~~~~D~s----~~~~lrgh~apVl~l~~~p~~~ 151 (933)
T KOG1274|consen 84 PSG-------EEDTILARFTLPIRDLAVSGSG-KMIAAGSDDTAVKLLNLDDSS----QEKVLRGHDAPVLQLSYDPKGN 151 (933)
T ss_pred CCC-------CccceeeeeeccceEEEEecCC-cEEEeecCceeEEEEeccccc----hheeecccCCceeeeeEcCCCC
Confidence 886 3332333445689999999999 899999999999999999887 6788999999999999999999
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCC----cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc-
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPN----AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF- 407 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~- 407 (812)
+||+.+.||.|+|||+..+.....+..+.. .....++.++|+|++..|+..+.|+.|++|+...+ .....+
T Consensus 152 -fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~w---e~~f~Lr 227 (933)
T KOG1274|consen 152 -FLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGW---ELQFKLR 227 (933)
T ss_pred -EEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCc---eeheeec
Confidence 799999999999999985433222222111 11345678999999888888888999999999853 333333
Q ss_pred -ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 408 -KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 408 -~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
..+...+..++|+|+| .+||+++.||.|.|||..+.. .|.....|.+++|.|+.+.+-
T Consensus 228 ~~~~ss~~~~~~wsPnG-~YiAAs~~~g~I~vWnv~t~~--------------------~~~~~~~Vc~~aw~p~~n~it 286 (933)
T KOG1274|consen 228 DKLSSSKFSDLQWSPNG-KYIAASTLDGQILVWNVDTHE--------------------RHEFKRAVCCEAWKPNANAIT 286 (933)
T ss_pred ccccccceEEEEEcCCC-cEEeeeccCCcEEEEecccch--------------------hccccceeEEEecCCCCCeeE
Confidence 3345559999999997 699999999999999998631 144456899999999988776
Q ss_pred EEEeCCCe
Q psy4510 487 ISTANSGF 494 (812)
Q Consensus 487 ~~~~~~~~ 494 (812)
+....+..
T Consensus 287 ~~~~~g~~ 294 (933)
T KOG1274|consen 287 LITALGTL 294 (933)
T ss_pred EEeecccc
Confidence 66665543
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=202.97 Aligned_cols=254 Identities=18% Similarity=0.181 Sum_probs=205.7
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.++|.|++-+| +|.+|+.|+..|.+++|.+.++. .+..+.+|-..|+|+.|+.||.+|++|+.||.|.+|.+..-
T Consensus 81 Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~----LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~l 155 (476)
T KOG0646|consen 81 PGPVHALASSN-LGYFLLAGTISGNLYLWELSSGI----LLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDL 155 (476)
T ss_pred ccceeeeecCC-CceEEEeecccCcEEEEEecccc----HHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEee
Confidence 37799999999 99999999999999999999998 77888999999999999999999999999999999987543
Q ss_pred --CCCCCCCCCceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 --KGPGIPTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 --~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
.......+|++.+..|+-.|+.+...+-+ ..+|+|++.|.++++||+..+. ....+. ....+.+++..|-+.
T Consensus 156 v~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~----LLlti~-fp~si~av~lDpae~ 230 (476)
T KOG0646|consen 156 VSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV----LLLTIT-FPSSIKAVALDPAER 230 (476)
T ss_pred cccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce----eeEEEe-cCCcceeEEEccccc
Confidence 11112468999999999999999987753 2689999999999999999886 333333 456899999999998
Q ss_pred eEEEEEECCCeEEEEECCCCCc-------------ccceeecCCcCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINT-------------KSCMLTLPNAHTS--DVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~-------------~~~~~~~~~~~~~--~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.+..|+.+|.|.+.++..... ...+..+ .+|.+ .|+|++.+-+|.+|++|+.||.|+|||+.
T Consensus 231 -~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~-~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~- 307 (476)
T KOG0646|consen 231 -VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL-VGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY- 307 (476)
T ss_pred -EEEecCCcceEEeeehhcCCcccccccccccccccceeeee-ccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc-
Confidence 699999999999988764331 1112223 67777 99999999999999999999999999997
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+.++++....++|+.+.+.|-.+..+..-.....+..|++...
T Consensus 308 --S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~lkr~ 352 (476)
T KOG0646|consen 308 --SKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHLKRM 352 (476)
T ss_pred --hHHHHHHHhhhccccceeEeeccccceecccccCccCCchHhhcc
Confidence 577888887678999999997764333443333445555555443
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-22 Score=187.24 Aligned_cols=276 Identities=17% Similarity=0.238 Sum_probs=213.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
.+|+.|++.|.+||+|..+|.|.|||+.+ ...-..+.+|..+|++++|+++| +.|++++.|..|.+||+..+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T---~~iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~g---- 97 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDT---FRIARMLSAHVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLKG---- 97 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccc---cchhhhhhccccceeEEEecCCC-CEeeeecCCceeEEEeccCC----
Confidence 78999999999999999999999999984 45667788999999999999997 69999999999999999988
Q ss_pred HHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCC
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG 528 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 528 (812)
.++.......+|..+.|||.....++++-....-+. +.|++. ..
T Consensus 98 -------------s~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~v----------------------i~~s~~-~h 141 (405)
T KOG1273|consen 98 -------------SPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVV----------------------IDFSDP-KH 141 (405)
T ss_pred -------------CceeEEEccCccceeeeccccCCeEEEEEecCCcEE----------------------EEecCC-ce
Confidence 344444556789999999987777666644332111 222211 01
Q ss_pred eEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec
Q psy4510 529 TIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG 608 (812)
Q Consensus 529 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~ 608 (812)
.++...+++. . .....+..|.+.|+++++| .
T Consensus 142 ~~Lp~d~d~d-----------------------------------------l------n~sas~~~fdr~g~yIitG--t 172 (405)
T KOG1273|consen 142 SVLPKDDDGD-----------------------------------------L------NSSASHGVFDRRGKYIITG--T 172 (405)
T ss_pred eeccCCCccc-----------------------------------------c------ccccccccccCCCCEEEEe--c
Confidence 1111111100 0 0011223688999999999 7
Q ss_pred CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC-CceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 609 EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 609 ~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
..|.+.+++..+.+ ++..++--+ ..|..+.|+. .++.|+.-+.|+.||.+++.
T Consensus 173 sKGkllv~~a~t~e-------------------------~vas~rits~~~IK~I~~s~-~g~~liiNtsDRvIR~ye~~ 226 (405)
T KOG1273|consen 173 SKGKLLVYDAETLE-------------------------CVASFRITSVQAIKQIIVSR-KGRFLIINTSDRVIRTYEIS 226 (405)
T ss_pred CcceEEEEecchhe-------------------------eeeeeeechheeeeEEEEec-cCcEEEEecCCceEEEEehh
Confidence 89999999999876 565565555 6888999999 89999999999999999998
Q ss_pred C---------------------CceeEEEEecCCCCEEEeecC-CCeEEEeecCCCCCcccccccccCCC-cceeEeEEe
Q psy4510 688 E---------------------AGAWSVYLYTNRFGVLATGDC-KRNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWS 744 (812)
Q Consensus 688 ~---------------------~~~~~~~~~s~dg~~lasgs~-dg~i~iwd~~~~~~~~~~~~~~~gH~-~~V~~l~fs 744 (812)
. ...|..++||.+|.|+++|+. ...++||.-..|. +++.+.|-. ....++.|.
T Consensus 227 di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs----LVKILhG~kgE~l~DV~wh 302 (405)
T KOG1273|consen 227 DIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS----LVKILHGTKGEELLDVNWH 302 (405)
T ss_pred hhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcc----eeeeecCCchhheeecccc
Confidence 4 123566789999999988875 4589999998887 788998888 467889999
Q ss_pred cCCceeEEeeccCCceEEeeecCcc
Q psy4510 745 PGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 745 ~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
|-.. +++|- ..|+|+||.....+
T Consensus 303 p~rp-~i~si-~sg~v~iw~~~~~e 325 (405)
T KOG1273|consen 303 PVRP-IIASI-ASGVVYIWAVVQVE 325 (405)
T ss_pred ccee-eeeec-cCCceEEEEeeccc
Confidence 9998 78877 78999999987776
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-22 Score=184.14 Aligned_cols=212 Identities=21% Similarity=0.355 Sum_probs=174.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc---------c--ccccccCCCCCCeeeeeEcCCCC-cEEEe
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW---------Q--VDQKPLGGHTNSAEDLQWSDLKT-ALQTV 241 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~---------~--~~~~~l~~h~~~V~~l~~s~~~~-~l~s~ 241 (812)
-|.+.|.++...+..|+++++|+.||.|.+||++....- . .....-.+|+..|..+.|-|-.. .+.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 477899999999999999999999999999999865421 0 12233457999999999988654 56677
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCC--CEEEEEeCCCcEEEEeCCCCCcceeccccccCCC
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
+-|.+++|||..+. +....|+ -.+.|++-+|||-.. .++|+|..+-.|++-|+.++. ....+.||.
T Consensus 121 SFDhtlKVWDtnTl-------Q~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs----~sH~LsGHr 188 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTL-------QEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGS----FSHTLSGHR 188 (397)
T ss_pred cccceEEEeecccc-------eeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCc----ceeeecccc
Confidence 88999999999884 4445554 367899999999642 468888999999999999998 788999999
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC-----------cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-----------TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
+.|.++.|+|....+|++|+.||.|++||+|... ...++.....+|.+.|+.++|..++.++++++.|.
T Consensus 189 ~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~ 268 (397)
T KOG4283|consen 189 DGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDD 268 (397)
T ss_pred CceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCcc
Confidence 9999999999999999999999999999998531 11122222367889999999999999999999999
Q ss_pred cEEEEecCC
Q psy4510 389 CIHVWDLRR 397 (812)
Q Consensus 389 ~i~iwd~~~ 397 (812)
.+++|+..+
T Consensus 269 r~r~wn~~~ 277 (397)
T KOG4283|consen 269 RIRVWNMES 277 (397)
T ss_pred ceEEeeccc
Confidence 999999975
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-22 Score=183.22 Aligned_cols=296 Identities=21% Similarity=0.303 Sum_probs=212.9
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCC-------CceEEeeCCCCCCC--CCCCCCceE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDP-------FQLAEHNKKRGKGP--GIPTPPLFS 267 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d-------~~i~vwd~~~~~~~--~~~~~~~~~ 267 (812)
|+.|++-+++..... ...+.|..|.+.|..++-+|..+.+ +++..+ ..+.||.+...... ..+..++..
T Consensus 39 dNqVhll~~d~e~s~-l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSE-LLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred cceeEEEEecCccch-hhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 567777777655432 2456788899999999999977655 444332 24789998764211 111233334
Q ss_pred Ec-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcc-ee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeE
Q psy4510 268 FS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 268 ~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~-~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
+. .+-+.|.|+.|.|++ ..|++-. |..|.+|++...... .. ....-.+|....++-+|+|....--+....|+++
T Consensus 118 Ldteavg~i~cvew~Pns-~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl 195 (370)
T KOG1007|consen 118 LDTEAVGKINCVEWEPNS-DKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTL 195 (370)
T ss_pred CCHHHhCceeeEEEcCCC-CeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcE
Confidence 43 455689999999987 6666665 789999999987641 11 1112233566788999999322113444567999
Q ss_pred EEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
..||+|+ ..+...+..+|...|..+.|+|+.+ +|++|++||.|+|||.|+ +..++..+.+|...|.++.|+|..
T Consensus 196 ~~~D~RT---~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~--tk~pv~el~~HsHWvW~VRfn~~h 270 (370)
T KOG1007|consen 196 QFWDLRT---MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK--TKFPVQELPGHSHWVWAVRFNPEH 270 (370)
T ss_pred EEEEccc---hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC--CCccccccCCCceEEEEEEecCcc
Confidence 9999995 4455666689999999999999987 899999999999999998 778999999999999999999998
Q ss_pred CcEEEEEECCCCEEEEEcCCCCchhH------------HHhhhhhccCC-CceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 424 SSTFASGGADDQIALWDLAVERDSEI------------EQREAELKDLP-SQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 424 ~~~l~s~~~dg~v~iwd~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
.+++++||.|..|.+|.......... .........++ .++.....+...|++++|+...|+++++-+
T Consensus 271 dqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLS 350 (370)
T KOG1007|consen 271 DQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLS 350 (370)
T ss_pred ceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEec
Confidence 89999999999999998765431110 01111111222 233444555668999999999999999999
Q ss_pred CCCeEEEEeCC
Q psy4510 491 NSGFNIFRTIS 501 (812)
Q Consensus 491 ~~~~~~~~~~~ 501 (812)
.||..+.....
T Consensus 351 YDGRviIs~V~ 361 (370)
T KOG1007|consen 351 YDGRVIISSVP 361 (370)
T ss_pred cCceEEeecCC
Confidence 99987765443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=197.24 Aligned_cols=265 Identities=18% Similarity=0.242 Sum_probs=209.1
Q ss_pred CCeEEEe-cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 189 PGVLATG-DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 189 ~~~lat~-~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
+.+++++ ..-..+.+|.+..... .....--.++|.|++-+|.|.+|+.|...+.|++|.+.+| ..+..
T Consensus 50 ~~yllsaq~~rp~l~vw~i~k~~~----~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG-------~LL~v 118 (476)
T KOG0646|consen 50 NEYLLSAQLKRPLLHVWEILKKDQ----VVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSG-------ILLNV 118 (476)
T ss_pred hhheeeecccCccccccccCchhh----hhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccc-------cHHHH
Confidence 3455544 2345789998876542 1223345678999999999999999999999999999997 88888
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC-----cceeccccccCCCCCEEEEEEcCCC-CeEEEEEECC
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-----AWQVDQKPLVGHTNSVEDLQWSPGE-KRVLASCSVD 341 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~d 341 (812)
+.+|-..|++|.|+-++ .+|+||+.||.|.+|.+..-- ....+...+..|+-+|+++...+.+ ...++|+|.|
T Consensus 119 ~~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D 197 (476)
T KOG0646|consen 119 LSAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASED 197 (476)
T ss_pred HHhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCC
Confidence 99999999999999999 899999999999999864321 1223567788999999999988763 2369999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC-------------CCCceEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK-------------KGSSVATFK 408 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~-------------~~~~~~~~~ 408 (812)
.++++||+..+ ..+.++ .....+.+++..|-+..+++|+.+|.|.+.++.+.. .+..+..+.
T Consensus 198 ~t~k~wdlS~g---~LLlti--~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~ 272 (476)
T KOG0646|consen 198 RTIKLWDLSLG---VLLLTI--TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLV 272 (476)
T ss_pred ceEEEEEeccc---eeeEEE--ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeec
Confidence 99999999843 344444 457789999999999999999999999999887543 123456778
Q ss_pred cCCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec-CCCceeEEEEcCCCCCE
Q psy4510 409 HHTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL-GQKEIKELHWHPQLPGT 485 (812)
Q Consensus 409 ~h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~ 485 (812)
+|.+ +|+|++.+-++ .+|++|+.||.|++||+...+. +.... ..++|+.+.+.|-.+..
T Consensus 273 Gh~~~~~ITcLais~Dg-tlLlSGd~dg~VcvWdi~S~Q~-----------------iRtl~~~kgpVtnL~i~~~~~~~ 334 (476)
T KOG0646|consen 273 GHENESAITCLAISTDG-TLLLSGDEDGKVCVWDIYSKQC-----------------IRTLQTSKGPVTNLQINPLERGI 334 (476)
T ss_pred cccCCcceeEEEEecCc-cEEEeeCCCCCEEEEecchHHH-----------------HHHHhhhccccceeEeeccccce
Confidence 8988 99999999997 6999999999999999988743 22222 35678888887765544
Q ss_pred EEE
Q psy4510 486 IIS 488 (812)
Q Consensus 486 ~~~ 488 (812)
+..
T Consensus 335 ~l~ 337 (476)
T KOG0646|consen 335 ILF 337 (476)
T ss_pred ecc
Confidence 443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-24 Score=218.08 Aligned_cols=240 Identities=20% Similarity=0.348 Sum_probs=209.5
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
..+++..|...+.|+..-. .++.+++||.|-.+-+|.+.... ....+.+|..+|.++.|++...+|++|+.+|+|
T Consensus 20 ~~~~~~~hsaav~~lk~~~-s~r~~~~Gg~~~k~~L~~i~kp~----~i~S~~~hespIeSl~f~~~E~Llaagsasgti 94 (825)
T KOG0267|consen 20 DTREFVAHSAAVGCLKIRK-SSRSLVTGGEDEKVNLWAIGKPN----AITSLTGHESPIESLTFDTSERLLAAGSASGTI 94 (825)
T ss_pred cchhhhhhhhhhceeeeec-cceeeccCCCceeeccccccCCc----hhheeeccCCcceeeecCcchhhhcccccCCce
Confidence 3456667888888888755 88999999999999999887765 455689999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++||+..+ +.++++.||...+.++.|+|-+ .+.|+|+.|+.+++||++..+ +...+.+|...|..+.|
T Consensus 95 K~wDleeA-------k~vrtLtgh~~~~~sv~f~P~~-~~~a~gStdtd~~iwD~Rk~G----c~~~~~s~~~vv~~l~l 162 (825)
T KOG0267|consen 95 KVWDLEEA-------KIVRTLTGHLLNITSVDFHPYG-EFFASGSTDTDLKIWDIRKKG----CSHTYKSHTRVVDVLRL 162 (825)
T ss_pred eeeehhhh-------hhhhhhhccccCcceeeeccce-EEeccccccccceehhhhccC----ceeeecCCcceeEEEee
Confidence 99999985 7888999999999999999999 788999999999999999877 78889999999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
+|+|+ ++++++.|.+++|||++. +..+..+ ..|.+.+.++.|+|..-++++|+.|+++++||++. -..+...
T Consensus 163 sP~Gr-~v~~g~ed~tvki~d~~a---gk~~~ef-~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet---fe~I~s~ 234 (825)
T KOG0267|consen 163 SPDGR-WVASGGEDNTVKIWDLTA---GKLSKEF-KSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET---FEVISSG 234 (825)
T ss_pred cCCCc-eeeccCCcceeeeecccc---ccccccc-ccccccccccccCchhhhhccCCCCceeeeeccce---eEEeecc
Confidence 99999 799999999999999984 4444555 78999999999999999999999999999999984 4456666
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
......|.++.|+|++ ..+++|...
T Consensus 235 ~~~~~~v~~~~fn~~~-~~~~~G~q~ 259 (825)
T KOG0267|consen 235 KPETDGVRSLAFNPDG-KIVLSGEQI 259 (825)
T ss_pred CCccCCceeeeecCCc-eeeecCchh
Confidence 6668899999999997 466666543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=223.62 Aligned_cols=296 Identities=20% Similarity=0.351 Sum_probs=220.7
Q ss_pred eEEEEeCCCCCC-eEEEe----------cCCCcEEEEccCCCCcccccccccC--CCCCCeeeeeEcCCCCc----EEEe
Q psy4510 179 GFAMDWSSTEPG-VLATG----------DCKRNIHIWTPREAGAWQVDQKPLG--GHTNSAEDLQWSDLKTA----LQTV 241 (812)
Q Consensus 179 i~~~~~sp~~~~-~lat~----------~~dg~v~iwd~~~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~----l~s~ 241 (812)
--.++||| .+. ++|+| +.+.++-||.+.-..... .++... .-..+-+.|+|.+.+.. |+.|
T Consensus 9 ta~~awSp-~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~-dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG 86 (1049)
T KOG0307|consen 9 TATFAWSP-ASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESS-DLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGG 86 (1049)
T ss_pred cceEEecC-CCchhhHHHhhhhccccccccccccceeeecccCccc-cccccccccccccceeeeecccCCCccceeecc
Confidence 34578999 554 66765 335566677554322110 011111 23456789999998887 7888
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..||.|.+|+...-. .......+.++..|++.|.+|.|++...++||+|+.+|.|.|||+.+........ -....+.
T Consensus 87 ~edG~I~ly~p~~~~-~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~--~~~~~~e 163 (1049)
T KOG0307|consen 87 LEDGNIVLYDPASII-ANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG--SQAPPSE 163 (1049)
T ss_pred ccCCceEEecchhhc-cCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC--CCCCccc
Confidence 899999999986620 0113456677889999999999999987899999999999999999865321111 1224568
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC--CCeEEEEEcCCCC-EEEEEeCC---CcEEEEec
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT--SDVNVISWNRTEP-LIVSGGDD---GCIHVWDL 395 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~-~l~sg~~d---g~i~iwd~ 395 (812)
|.+++|+..-.++|++++.+|.+.|||+|. .+.+..+ ..+. ..+..++|+|+.. .+++++.| -.|.+||+
T Consensus 164 I~~lsWNrkvqhILAS~s~sg~~~iWDlr~---~~pii~l-s~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDl 239 (1049)
T KOG0307|consen 164 IKCLSWNRKVSHILASGSPSGRAVIWDLRK---KKPIIKL-SDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDL 239 (1049)
T ss_pred ceEeccchhhhHHhhccCCCCCceeccccC---CCccccc-ccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecc
Confidence 999999999888999999999999999994 3445555 2232 4588999999985 66666554 46999999
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
|. ...+++.+.+|...|.++.|++.++.+|++++.|++|.+|+..++. .+-........+..
T Consensus 240 R~--assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE----------------vl~~~p~~~nW~fd 301 (1049)
T KOG0307|consen 240 RF--ASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE----------------VLGELPAQGNWCFD 301 (1049)
T ss_pred cc--cCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCce----------------EeeecCCCCcceee
Confidence 97 6678999999999999999999998999999999999999999873 22222233446999
Q ss_pred EEEcCCCCCEEEEEeCCC-eEEEEeCC
Q psy4510 476 LHWHPQLPGTIISTANSG-FNIFRTIS 501 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~-~~~~~~~~ 501 (812)
+.|+|..|.++++.+.+| +.||....
T Consensus 302 v~w~pr~P~~~A~asfdgkI~I~sl~~ 328 (1049)
T KOG0307|consen 302 VQWCPRNPSVMAAASFDGKISIYSLQG 328 (1049)
T ss_pred eeecCCCcchhhhheeccceeeeeeec
Confidence 999999998888877665 56665444
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-22 Score=198.18 Aligned_cols=310 Identities=19% Similarity=0.298 Sum_probs=222.3
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.+|.+.|.+|+..|.|.+|++|+.||+|+||.+. ++.++.++. ..+.|.+|+|+|.....+++......+.|-+-.
T Consensus 397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~---TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~ 472 (733)
T KOG0650|consen 397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIA---TGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPI 472 (733)
T ss_pred eccCCeEEEEEecCCcceeeecCCCCcEEEEEee---cceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCcc
Confidence 7899999999999999999999999999999999 688888876 356899999999876666666656667777765
Q ss_pred CCCchhHHHhhhhhccC---------------------CCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC--eEEEEe
Q psy4510 443 VERDSEIEQREAELKDL---------------------PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG--FNIFRT 499 (812)
Q Consensus 443 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~--~~~~~~ 499 (812)
.+...........+... ...+.....+.+.|.++.||..+.++..+...++ ..+...
T Consensus 473 ~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQ 552 (733)
T KOG0650|consen 473 FGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQ 552 (733)
T ss_pred ccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEe
Confidence 55332221111111111 0112233444568999999999987666665444 233344
Q ss_pred CCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc
Q psy4510 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM 579 (812)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (812)
.+....+..+. ...+.|..+.|+|..+.+++++... ++.+.+.. ..+
T Consensus 553 LSK~~sQ~PF~-kskG~vq~v~FHPs~p~lfVaTq~~----vRiYdL~k----------------------------qel 599 (733)
T KOG0650|consen 553 LSKRKSQSPFR-KSKGLVQRVKFHPSKPYLFVATQRS----VRIYDLSK----------------------------QEL 599 (733)
T ss_pred cccccccCchh-hcCCceeEEEecCCCceEEEEeccc----eEEEehhH----------------------------HHH
Confidence 44444443332 2346899999999998888888744 23333322 112
Q ss_pred ceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCce
Q psy4510 580 NSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 659 (812)
Q Consensus 580 ~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V 659 (812)
...+......|..++.+|.|..|+++ +.|+.+..+|++-.. ++.++++-|...|
T Consensus 600 vKkL~tg~kwiS~msihp~GDnli~g--s~d~k~~WfDldlss------------------------kPyk~lr~H~~av 653 (733)
T KOG0650|consen 600 VKKLLTGSKWISSMSIHPNGDNLILG--SYDKKMCWFDLDLSS------------------------KPYKTLRLHEKAV 653 (733)
T ss_pred HHHHhcCCeeeeeeeecCCCCeEEEe--cCCCeeEEEEcccCc------------------------chhHHhhhhhhhh
Confidence 33444555689999999999999999 899999999998654 3788899999999
Q ss_pred EEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcc--
Q psy4510 660 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS-- 737 (812)
Q Consensus 660 ~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~-- 737 (812)
++|+|++ .--+++||+.||++.|+-- .||+=--...+-+.+..+.||...
T Consensus 654 r~Va~H~-ryPLfas~sdDgtv~Vfhg---------------------------~VY~Dl~qnpliVPlK~L~gH~~~~~ 705 (733)
T KOG0650|consen 654 RSVAFHK-RYPLFASGSDDGTVIVFHG---------------------------MVYNDLLQNPLIVPLKRLRGHEKTND 705 (733)
T ss_pred hhhhhcc-ccceeeeecCCCcEEEEee---------------------------eeehhhhcCCceEeeeeccCceeecc
Confidence 9999999 6679999999999888752 122211111122345678899765
Q ss_pred --eeEeEEecCCceeEEeeccCCceEEee
Q psy4510 738 --VEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 738 --V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
|.+..|+|.-. +|+|+|.||+|++|.
T Consensus 706 ~gVLd~~wHP~qp-WLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 706 LGVLDTIWHPRQP-WLFSAGADGTIRLFT 733 (733)
T ss_pred cceEeecccCCCc-eEEecCCCceEEeeC
Confidence 99999999999 899999999999983
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=189.89 Aligned_cols=289 Identities=12% Similarity=0.152 Sum_probs=209.8
Q ss_pred cccccCCCCCCeeeeeEcCCCC--cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKT--ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~--~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
......-|.++|++++|.|... .+|+|+..|.|-+||+.+.. ....-+..+..|.++|.+|.|+|.+...+++.+
T Consensus 178 ~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~---~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssS 254 (498)
T KOG4328|consen 178 ILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE---KDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSS 254 (498)
T ss_pred ecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCC---CccCceEEeccCCccccceEecCCChhheeeec
Confidence 3445667889999999999764 78888899999999996321 123556778999999999999999988999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.||+|++-|++..... ....+......+..++|+..... ++.+..=|...+||+|+..... ..+ .-|...|+++
T Consensus 255 yDGtiR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~-vl~~~~~G~f~~iD~R~~~s~~--~~~-~lh~kKI~sv 328 (498)
T KOG4328|consen 255 YDGTIRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRS-VLFGDNVGNFNVIDLRTDGSEY--ENL-RLHKKKITSV 328 (498)
T ss_pred cCceeeeeeecchhhH--HHhhcCccceeeeeccccCCCcc-EEEeecccceEEEEeecCCccc--hhh-hhhhccccee
Confidence 9999999999876521 12222234557888999988885 5666666799999999755432 222 5678899999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCCCC-ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKKGS-SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+++|... +|||++.|++.+|||+|+..... ++.....|...|.+..|+|.+.+ |++.+.|..|+|||..-..
T Consensus 329 ~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~D~~IRv~dss~~s----- 402 (498)
T KOG4328|consen 329 ALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQDNEIRVFDSSCIS----- 402 (498)
T ss_pred ecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeeccCCceEEeeccccc-----
Confidence 9999886 99999999999999999876555 45566679999999999999875 9999999999999985221
Q ss_pred HhhhhhccCCCceEEeecCCC----ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe--ecCCCCeeE-EEEc
Q psy4510 451 QREAELKDLPSQLLFIHLGQK----EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI--HLGQKEIKE-LHWH 523 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~-~~~~ 523 (812)
...++.....|.... ......|+|+...++++.-...+-+|+.... +.+.. .+....|.+ ..||
T Consensus 403 ------a~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~---q~v~el~~P~~~tI~~vn~~H 473 (498)
T KOG4328|consen 403 ------AKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGG---QMVCELHDPESSTIPSVNEFH 473 (498)
T ss_pred ------ccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCC---EEeeeccCccccccccceeec
Confidence 122334555555443 4667799998654444444455666654433 21211 111223443 4789
Q ss_pred CCCC
Q psy4510 524 PQLP 527 (812)
Q Consensus 524 p~~~ 527 (812)
|-..
T Consensus 474 P~~~ 477 (498)
T KOG4328|consen 474 PMRD 477 (498)
T ss_pred cccc
Confidence 9843
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=189.18 Aligned_cols=205 Identities=15% Similarity=0.171 Sum_probs=165.1
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
.++|++|.|+|....|++++.|++++||.++.. ....++.+.-...+|.+++|.|+|...+++++....++.||+
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk-----~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDl 287 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGK-----VNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDL 287 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCc-----cChhheeeeeccCccceeeecCCCceEEEecccceEEEEeec
Confidence 468999999999999999999999999999875 345666666667899999999999669999999999999999
Q ss_pred CCCCcceeccccccCCC-CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 303 REAGAWQVDQKPLVGHT-NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
.+.+.. ......++. ..+.....+|+++ +|+..+..|.|.+....++ ..+.++ .-.+.|..++|+.+++.|
T Consensus 288 e~ak~~--k~~~~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~---eli~s~--KieG~v~~~~fsSdsk~l 359 (514)
T KOG2055|consen 288 ETAKVT--KLKPPYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTK---ELITSF--KIEGVVSDFTFSSDSKEL 359 (514)
T ss_pred cccccc--cccCCCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhh---hhhhee--eeccEEeeEEEecCCcEE
Confidence 887631 233444444 4788889999999 6999999999999988743 333333 235789999999999988
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEcccCCC-CEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTA-PVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++.+.+|.|.+||++. ..+++.+....+ .-++++.++++ .+||+|+..|.|.|||....
T Consensus 360 ~~~~~~GeV~v~nl~~---~~~~~rf~D~G~v~gts~~~S~ng-~ylA~GS~~GiVNIYd~~s~ 419 (514)
T KOG2055|consen 360 LASGGTGEVYVWNLRQ---NSCLHRFVDDGSVHGTSLCISLNG-SYLATGSDSGIVNIYDGNSC 419 (514)
T ss_pred EEEcCCceEEEEecCC---cceEEEEeecCccceeeeeecCCC-ceEEeccCcceEEEeccchh
Confidence 8888899999999994 467777754221 23677778887 59999999999999997654
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=6e-21 Score=177.07 Aligned_cols=289 Identities=15% Similarity=0.252 Sum_probs=193.5
Q ss_pred ccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEE
Q psy4510 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHV 392 (812)
Q Consensus 315 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~i 392 (812)
-.+|..-|.++.|.+.|++ +|+|+.|++|+|||.+..........-...|.+.|..+.|.+ .|+.+|+++.|+++.|
T Consensus 9 ~s~h~DlihdVs~D~~GRR-mAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~i 87 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRR-MATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSI 87 (361)
T ss_pred ccCCcceeeeeeecccCce-eeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceee
Confidence 3578899999999999995 999999999999997654443333333489999999999976 5789999999999999
Q ss_pred EecCCCC------CCCceEEcccCCCCEEEEEEccCC-CcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEE
Q psy4510 393 WDLRRFK------KGSSVATFKHHTAPVTTVEWHPTE-SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF 465 (812)
Q Consensus 393 wd~~~~~------~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (812)
|.-...+ ......++......|+.|+|.|.. +..||+++.||.||||+.-.......-+...++..++..
T Consensus 88 WEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~p--- 164 (361)
T KOG2445|consen 88 WEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDP--- 164 (361)
T ss_pred eeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCC---
Confidence 9863211 112345667778899999999963 357899999999999998766443322222223222211
Q ss_pred eecCCCceeEEEEcCCC--CCEEEEEeCC------CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 466 IHLGQKEIKELHWHPQL--PGTIISTANS------GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 466 ~~~~~~~v~~~~~~p~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
....+....++.|+|.. +.+++.++.. ...+|.. ..++.
T Consensus 165 p~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~-----------------------~e~~r---------- 211 (361)
T KOG2445|consen 165 PGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEY-----------------------NENGR---------- 211 (361)
T ss_pred cccccCcceEEeeccccccCceEEEEcccCCccccceEEEEe-----------------------cCCcc----------
Confidence 11223467788888752 2244444433 1222211 11100
Q ss_pred ceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC----eEEEEeecCcceE
Q psy4510 538 FNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS----TTLAGVWGEVGKV 613 (812)
Q Consensus 538 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~----~l~~~~~~~dg~I 613 (812)
.......+..|..+|+.++|.|.-. .|+++ +.|| |
T Consensus 212 --------------------------------------Kw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA--~kDg-v 250 (361)
T KOG2445|consen 212 --------------------------------------KWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVA--TKDG-V 250 (361)
T ss_pred --------------------------------------eeeeehhcCCCCCcceeeeeccccCCceeeEEEe--ecCc-E
Confidence 0011223457888999999999533 45555 7899 9
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
+||.+......+..... .............+..+.+|.++|+.+.|.- .|.+|+|.|.||+||+|...
T Consensus 251 ~I~~v~~~~s~i~~ee~-----~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNm-tGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 251 RIFKVKVARSAIEEEEV-----LAPDLMTDLPVEKVSELDDHNGEVWRVRWNM-TGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred EEEEEeeccchhhhhcc-----cCCCCccccceEEeeeccCCCCceEEEEEee-eeeEEeecCCCceeeehhhh
Confidence 99999865422111000 0111112234556777899999999999999 78899999999999999864
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=195.75 Aligned_cols=301 Identities=18% Similarity=0.237 Sum_probs=220.1
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCc--EEEeeCCCceE
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTA--LQTVDDPFQLA 248 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~--l~s~~~d~~i~ 248 (812)
.+.||++.|.|+...| .|.+||+|+.||+|+||.+.++.. +++.. ..+.|.|++|+|.+.. ||++ ....+.
T Consensus 395 vyrGHtg~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRc----vr~~~-~d~~I~~vaw~P~~~~~vLAvA-~~~~~~ 467 (733)
T KOG0650|consen 395 VYRGHTGLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRC----VRTVQ-FDSEIRSVAWNPLSDLCVLAVA-VGECVL 467 (733)
T ss_pred eEeccCCeEEEEEecC-CcceeeecCCCCcEEEEEeecceE----EEEEe-ecceeEEEEecCCCCceeEEEE-ecCceE
Confidence 4569999999999999 999999999999999999999873 33322 2348999999998863 3333 333344
Q ss_pred EeeCCCCC-------------CC--CC---------------CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---CC
Q psy4510 249 EHNKKRGK-------------GP--GI---------------PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---KR 295 (812)
Q Consensus 249 vwd~~~~~-------------~~--~~---------------~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---dg 295 (812)
|-+..-|. .+ .. ...-+.....|...|..+.|+..| .+|++... ..
T Consensus 468 ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkG-DYlatV~~~~~~~ 546 (733)
T KOG0650|consen 468 IVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKG-DYLATVMPDSGNK 546 (733)
T ss_pred EeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCC-ceEEEeccCCCcc
Confidence 43322220 00 00 001123444578899999999999 78887654 35
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
.|.|.++.... .+.+|....+.|.++.|+|...+ |+.++. ..|+|||+.. ...+..+ ......|.+++.+
T Consensus 547 ~VliHQLSK~~----sQ~PF~kskG~vq~v~FHPs~p~-lfVaTq-~~vRiYdL~k---qelvKkL-~tg~kwiS~msih 616 (733)
T KOG0650|consen 547 SVLIHQLSKRK----SQSPFRKSKGLVQRVKFHPSKPY-LFVATQ-RSVRIYDLSK---QELVKKL-LTGSKWISSMSIH 616 (733)
T ss_pred eEEEEeccccc----ccCchhhcCCceeEEEecCCCce-EEEEec-cceEEEehhH---HHHHHHH-hcCCeeeeeeeec
Confidence 78999998876 46777777889999999999996 555554 7899999973 3333444 4456789999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
|.|.-|+.|+.|+.+..+|+.. ..++.++++.|...+++|+||+.-+ +|++|+.||++.|+--....+.. ..
T Consensus 617 p~GDnli~gs~d~k~~WfDldl--sskPyk~lr~H~~avr~Va~H~ryP-Lfas~sdDgtv~Vfhg~VY~Dl~-----qn 688 (733)
T KOG0650|consen 617 PNGDNLILGSYDKKMCWFDLDL--SSKPYKTLRLHEKAVRSVAFHKRYP-LFASGSDDGTVIVFHGMVYNDLL-----QN 688 (733)
T ss_pred CCCCeEEEecCCCeeEEEEccc--CcchhHHhhhhhhhhhhhhhccccc-eeeeecCCCcEEEEeeeeehhhh-----cC
Confidence 9999999999999999999986 5678999999999999999999864 89999999999998755443210 00
Q ss_pred hccCCCceEEeecCC--CceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 456 LKDLPSQLLFIHLGQ--KEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
..-+|...+..|... -.|.++.|||..++++.+++++.+.+|
T Consensus 689 pliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 689 PLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred CceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 011122222222222 248889999999999999998887776
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=218.61 Aligned_cols=254 Identities=20% Similarity=0.330 Sum_probs=211.2
Q ss_pred CCCceEEEEeCCCCCCe----EEEecCCCcEEEEccCCC--CcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCce
Q psy4510 175 HLTEGFAMDWSSTEPGV----LATGDCKRNIHIWTPREA--GAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQL 247 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~----lat~~~dg~v~iwd~~~~--~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i 247 (812)
-..+-..++|.+ .+.. ||.|..||.|.+||...- ......+.+...|++.|..+.|++... +||+|+.+|.|
T Consensus 63 s~~rF~kL~W~~-~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI 141 (1049)
T KOG0307|consen 63 SSNRFNKLAWGS-YGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI 141 (1049)
T ss_pred ccccceeeeecc-cCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE
Confidence 345667799999 6654 999999999999998873 333446778899999999999999877 99999999999
Q ss_pred EEeeCCCCCCCCCCCCCceE-EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC--CCEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFS-FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT--NSVED 324 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~--~~v~~ 324 (812)
.|||+.+.. .+..- -..-.+.|.+|+|+..-..+|++++.+|.+.|||++..+ ....+..|. ..+..
T Consensus 142 ~iWDlnn~~------tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~----pii~ls~~~~~~~~S~ 211 (1049)
T KOG0307|consen 142 LIWDLNKPE------TPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKK----PIIKLSDTPGRMHCSV 211 (1049)
T ss_pred EEeccCCcC------CCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCC----cccccccCCCccceee
Confidence 999999842 22221 122457899999999887889999999999999999886 344444443 35889
Q ss_pred EEEcCCCCeEEEEEECCC---eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCC
Q psy4510 325 LQWSPGEKRVLASCSVDL---SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
++|+|++.+.+++++.|. .|.+||+|.... .+..+ .+|...|.++.|++.+ .+|++++.|+.|.+|+.. +
T Consensus 212 l~WhP~~aTql~~As~dd~~PviqlWDlR~ass--P~k~~-~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~---t 285 (1049)
T KOG0307|consen 212 LAWHPDHATQLLVASGDDSAPVIQLWDLRFASS--PLKIL-EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPN---T 285 (1049)
T ss_pred eeeCCCCceeeeeecCCCCCceeEeecccccCC--chhhh-cccccceeeeccCCCCchhhhcccCCCCeeEecCC---C
Confidence 999999988888888764 689999996433 34455 8999999999999988 599999999999999998 5
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++.+..+......+..+.|+|.++.++++++-||.|.|+.+....
T Consensus 286 gEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 286 GEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred ceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 888999998889999999999999999999999999999998765
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=191.87 Aligned_cols=265 Identities=16% Similarity=0.231 Sum_probs=211.0
Q ss_pred eEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
+..+.|+. ... .+|+.+.|..|++|.-............+.+. .-.|++......++++|+..+.|+|||++..
T Consensus 37 ~~s~~w~~-~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~k-- 111 (673)
T KOG4378|consen 37 DFSFNWQR-RNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLRAK-- 111 (673)
T ss_pred ceeeeccc-cceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhHHH--
Confidence 88899988 443 33455778899999655442212223333333 4455555566699999999999999999963
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC-CCCEEEEEEcCCCCeEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~ 336 (812)
...+.+++|+..|+++.++-.. .+||+++..|.|.|..+.++. ...+|... ...|.-+.|+|..+.+|.
T Consensus 112 -----l~hr~lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~----~tt~f~~~sgqsvRll~ys~skr~lL~ 181 (673)
T KOG4378|consen 112 -----LIHRFLKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQ----KTTTFTIDSGQSVRLLRYSPSKRFLLS 181 (673)
T ss_pred -----HHhhhccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCc----cccceecCCCCeEEEeecccccceeeE
Confidence 6677889999999999999887 799999999999999999886 34445433 346779999999999999
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+++.+|.|.+||+. ...+.......|..+...|+|+|... +|++.|.|..|.+||.+. ......+. ...+..
T Consensus 182 ~asd~G~VtlwDv~---g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s---~~s~~~l~-y~~Pls 254 (673)
T KOG4378|consen 182 IASDKGAVTLWDVQ---GMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRS---QASTDRLT-YSHPLS 254 (673)
T ss_pred eeccCCeEEEEecc---CCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeeccc---ccccceee-ecCCcc
Confidence 99999999999998 44556677789999999999999876 899999999999999984 33333333 456889
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+++|.++| .+|++|...|.|..||++..+. ++...+.+...|++++|-|.
T Consensus 255 tvaf~~~G-~~L~aG~s~G~~i~YD~R~~k~---------------Pv~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 255 TVAFSECG-TYLCAGNSKGELIAYDMRSTKA---------------PVAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred eeeecCCc-eEEEeecCCceEEEEecccCCC---------------CceEeeecccceeEEEeeec
Confidence 99999997 6999999999999999998754 56667777778999999886
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.3e-21 Score=187.46 Aligned_cols=295 Identities=13% Similarity=0.206 Sum_probs=211.9
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe--eCCCceEEeeCCCCCCCCCCCCCce-E
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLF-S 267 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~-~ 267 (812)
++|++|. +++|||+...+........... ..+.++.|+.... |+++ +.|..|++|...... +..|+. .
T Consensus 6 ~~aS~gd--~~kl~D~s~~~~~~~~~~~t~~--pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~----~~Vp~~~k 76 (673)
T KOG4378|consen 6 HVASTGD--KTKLSDFSDLETKSEYVHQTAE--PGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKT----PEVPRVRK 76 (673)
T ss_pred eeeccCC--ceEEeecccccCccccccCCCC--Ccceeeeccccce-EEEeecCCceeEEEecccCCC----Cccceeec
Confidence 4455553 7999999876521111111112 2389999987775 4444 478889999865520 112222 2
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
..|. .-+|++..... .++++|+..+.|+|||++... +.+.+++|++.|+++.++.... +||+++..|.|.|.
T Consensus 77 ~~gd--~~~Cv~~~s~S-~y~~sgG~~~~Vkiwdl~~kl----~hr~lkdh~stvt~v~YN~~De-yiAsvs~gGdiiih 148 (673)
T KOG4378|consen 77 LTGD--NAFCVACASQS-LYEISGGQSGCVKIWDLRAKL----IHRFLKDHQSTVTYVDYNNTDE-YIASVSDGGDIIIH 148 (673)
T ss_pred cccc--hHHHHhhhhcc-eeeeccCcCceeeehhhHHHH----HhhhccCCcceeEEEEecCCcc-eeEEeccCCcEEEE
Confidence 2222 34555555555 789999999999999999654 6788999999999999999888 59999999999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
.+.++.. ...+.......|.-+.|+|..+ +|.+++.+|.|.+||... ......-...|..+...|+|+|.++.+
T Consensus 149 ~~~t~~~---tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g--~sp~~~~~~~HsAP~~gicfspsne~l 223 (673)
T KOG4378|consen 149 GTKTKQK---TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQG--MSPIFHASEAHSAPCRGICFSPSNEAL 223 (673)
T ss_pred ecccCcc---ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccC--CCcccchhhhccCCcCcceecCCccce
Confidence 9985433 3333233455677899999887 788899999999999974 223344457899999999999999999
Q ss_pred EEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcc
Q psy4510 427 FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQ 506 (812)
Q Consensus 427 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (812)
|++.|.|..|.+||....+. ........+...++|.+++..++++.+.+.+..| ++...+..
T Consensus 224 ~vsVG~Dkki~~yD~~s~~s-----------------~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~Y-D~R~~k~P 285 (673)
T KOG4378|consen 224 LVSVGYDKKINIYDIRSQAS-----------------TDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAY-DMRSTKAP 285 (673)
T ss_pred EEEecccceEEEeecccccc-----------------cceeeecCCcceeeecCCceEEEeecCCceEEEE-ecccCCCC
Confidence 99999999999999987632 1122224478899999998555444444445444 55556666
Q ss_pred cEEeecCCCCeeEEEEcCC
Q psy4510 507 LLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 507 ~~~~~~~~~~i~~~~~~p~ 525 (812)
+...+.+...|++++|.|.
T Consensus 286 v~v~sah~~sVt~vafq~s 304 (673)
T KOG4378|consen 286 VAVRSAHDASVTRVAFQPS 304 (673)
T ss_pred ceEeeecccceeEEEeeec
Confidence 6677778888999999887
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.6e-21 Score=190.75 Aligned_cols=178 Identities=24% Similarity=0.375 Sum_probs=142.3
Q ss_pred ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC--CEEEEEeCCC
Q psy4510 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE--PLIVSGGDDG 388 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~sg~~dg 388 (812)
....+.||++.|+++.|+.+|. +|++||.|-.+.|||.- ..+.+..+..+|...|.++.|-|.. +++++|..|.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~-lL~SGSDD~r~ivWd~~---~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGE-LLASGSDDTRLIVWDPF---EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhhhccccceecceeecCCCC-EEeecCCcceEEeecch---hcceeeeeecccccceeEEeeeccCCCeEEEeccCcc
Confidence 3567899999999999999999 89999999999999987 4566777778999999999999965 4999999999
Q ss_pred cEEEEecCCCCC-------CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 389 CIHVWDLRRFKK-------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 389 ~i~iwd~~~~~~-------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
.|+++|+...+. ..+...+..|...|..|+-.|.+++.+.+++.||+|+-+|++...... ...+.+.
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~------p~~~~~~ 191 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCN------PDEDCPS 191 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCC------ccccccH
Confidence 999999985332 245566788999999999999999999999999999999998753211 1111222
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe-EEEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFR 498 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~-~~~~ 498 (812)
.+...+..--..+++..+|..+.+++.++.+-+ .+|+
T Consensus 192 ~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD 229 (758)
T KOG1310|consen 192 ILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYD 229 (758)
T ss_pred HHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhh
Confidence 232233323468899999999999999998876 4443
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-19 Score=188.65 Aligned_cols=289 Identities=9% Similarity=0.055 Sum_probs=191.9
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
+++++|++.|+.|++||+.+++ ....+..+. .+.+++|+|+++.+ ++++.++.|++||..++ +.+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~----~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~-------~~~~~ 68 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLE----VTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATG-------EVIGT 68 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCc----eEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCC-------cEEEe
Confidence 3678999999999999998776 444555544 46789999999977 56678899999999875 44444
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-eEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-SIRI 346 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~i 346 (812)
+..+.. +..++|+|++..++++++.++.|++||+.+.. ....+. +...+.+++|+|++. ++++++.++ .+.+
T Consensus 69 ~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~----~~~~~~-~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~ 141 (300)
T TIGR03866 69 LPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRK----VLAEIP-VGVEPEGMAVSPDGK-IVVNTSETTNMAHF 141 (300)
T ss_pred ccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCe----EEeEee-CCCCcceEEECCCCC-EEEEEecCCCeEEE
Confidence 544433 56789999984344556678999999998765 223332 233468899999999 577776654 5677
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCceEEcccCC-----C--CEEEEE
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGSSVATFKHHT-----A--PVTTVE 418 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~h~-----~--~v~~v~ 418 (812)
||.++. ...... .......+++|+|++++|+ ++..++.|++||++. ++.+..+..+. . ....+.
T Consensus 142 ~d~~~~---~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~---~~~~~~~~~~~~~~~~~~~~~~~i~ 213 (300)
T TIGR03866 142 IDTKTY---EIVDNV--LVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT---RKVIKKITFEIPGVHPEAVQPVGIK 213 (300)
T ss_pred EeCCCC---eEEEEE--EcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc---ceeeeeeeecccccccccCCccceE
Confidence 898743 222222 1223457899999999765 445689999999984 44444433221 1 235688
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe-CCCeEEE
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSGFNIF 497 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~-~~~~~~~ 497 (812)
|+|++...+++.+.++.+.+||+.+.+ +.........+.+++|+|++..++++.+ .+.+.+|
T Consensus 214 ~s~dg~~~~~~~~~~~~i~v~d~~~~~-----------------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~ 276 (300)
T TIGR03866 214 LTKDGKTAFVALGPANRVAVVDAKTYE-----------------VLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVI 276 (300)
T ss_pred ECCCCCEEEEEcCCCCeEEEEECCCCc-----------------EEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEE
Confidence 999986445555667789999997663 2222122346889999999876666555 4456666
Q ss_pred EeCCCCCcccEEeecCCCCeeEEEEcC
Q psy4510 498 RTISDLPSQLLFIHLGQKEIKELHWHP 524 (812)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~i~~~~~~p 524 (812)
+.........+.. ......++++|
T Consensus 277 d~~~~~~~~~~~~---~~~~~~~~~~~ 300 (300)
T TIGR03866 277 DVAALKVIKSIKV---GRLPWGVVVRP 300 (300)
T ss_pred ECCCCcEEEEEEc---ccccceeEeCC
Confidence 6555433333321 23445555543
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-19 Score=187.34 Aligned_cols=188 Identities=10% Similarity=0.063 Sum_probs=136.6
Q ss_pred CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc
Q psy4510 236 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 236 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 315 (812)
+.+++++.|+.+++||+.++ +++..+.++.. +.+++|+|++..++++++.++.|++||+.++. ....+
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~-------~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~----~~~~~ 69 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATL-------EVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGE----VIGTL 69 (300)
T ss_pred cEEEEecCCCEEEEEECCCC-------ceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCc----EEEec
Confidence 46788899999999999875 56677776544 67899999984345777889999999998875 23333
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-CIHVWD 394 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd 394 (812)
..+. .+..++|+|+++.++++++.++.|++||+++ ...+..+ .+...+.+++|+|+++++++++.++ .+.+||
T Consensus 70 ~~~~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~---~~~~~~~--~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d 143 (300)
T TIGR03866 70 PSGP-DPELFALHPNGKILYIANEDDNLVTVIDIET---RKVLAEI--PVGVEPEGMAVSPDGKIVVNTSETTNMAHFID 143 (300)
T ss_pred cCCC-CccEEEECCCCCEEEEEcCCCCeEEEEECCC---CeEEeEe--eCCCCcceEEECCCCCEEEEEecCCCeEEEEe
Confidence 3333 3567899999997666777799999999984 3334444 2234468899999999988888765 567789
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+. ...+.... ....+..++|+|++..+++++..++.|.+||+.+.+
T Consensus 144 ~~~---~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~ 190 (300)
T TIGR03866 144 TKT---YEIVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK 190 (300)
T ss_pred CCC---CeEEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce
Confidence 863 33333332 233457899999975444555568999999998763
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=177.14 Aligned_cols=300 Identities=16% Similarity=0.264 Sum_probs=221.2
Q ss_pred CCCCceEEEEeCCC----CCCeEEEecCCCcEEEEccCCCCcccccccccCC-CCCCeeeeeEcCC----CCcEEEeeCC
Q psy4510 174 GHLTEGFAMDWSST----EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG-HTNSAEDLQWSDL----KTALQTVDDP 244 (812)
Q Consensus 174 gh~~~i~~~~~sp~----~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~-h~~~V~~l~~s~~----~~~l~s~~~d 244 (812)
+|..+|..++|++. ....+||.|.+ +|.||...........+..... |......++|+-+ ..+||+++.-
T Consensus 36 d~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~ 114 (385)
T KOG1034|consen 36 DHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL 114 (385)
T ss_pred cCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence 67889999999853 45688888864 8999988776543333333333 7888888999754 3478999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
|.|+|.|+.++ +....+.+|...|..|.++|..++++++++.|.+|++|++++.....+ ..-+.+|.+.|.+
T Consensus 115 GvIrVid~~~~-------~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~V-fGG~egHrdeVLS 186 (385)
T KOG1034|consen 115 GVIRVIDVVSG-------QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAV-FGGVEGHRDEVLS 186 (385)
T ss_pred eEEEEEecchh-------hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEE-ecccccccCcEEE
Confidence 99999999985 788889999999999999999999999999999999999999874322 3456789999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCccc------------------------ceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKS------------------------CMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~------------------------~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
+.|++++. .|++|+.|.+|++|++....-.. +..+....|...|.|+.|- |++
T Consensus 187 vD~~~~gd-~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ 263 (385)
T KOG1034|consen 187 VDFSLDGD-RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDF 263 (385)
T ss_pred EEEcCCCC-eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhh
Confidence 99999999 59999999999999997321100 1111124577788888886 678
Q ss_pred EEEEeCCCcEEEEecCCCCC-----------CCceEEcccCCCCEEEEE--EccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 381 IVSGGDDGCIHVWDLRRFKK-----------GSSVATFKHHTAPVTTVE--WHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~--~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
+++-+-++.|..|..-+.+. ...+..+......|.-|. |.|.. .+||.|...|.|.+|||+.....
T Consensus 264 ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~-~~la~gnq~g~v~vwdL~~~ep~ 342 (385)
T KOG1034|consen 264 ILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQ-KMLALGNQSGKVYVWDLDNNEPP 342 (385)
T ss_pred eeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHH-HHHhhccCCCcEEEEECCCCCCc
Confidence 99999999999998732111 123344444455555554 45655 58999999999999999987431
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
. ...+.-......|.+.+|+.++..+++.+....+..|+
T Consensus 343 ~------------~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 343 K------------CTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred c------------CceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 0 01222223345799999999986666655555555554
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.7e-20 Score=185.50 Aligned_cols=274 Identities=12% Similarity=0.182 Sum_probs=212.3
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.|..++|-| +|..|+.+..+ .+.|||.+.+. ...++++|++.|+|++|+.+|+.+|+|+.|..+.+|..+-.
T Consensus 14 ci~d~afkP-DGsqL~lAAg~-rlliyD~ndG~----llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klE-- 85 (1081)
T KOG1538|consen 14 CINDIAFKP-DGTQLILAAGS-RLLVYDTSDGT----LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLE-- 85 (1081)
T ss_pred chheeEECC-CCceEEEecCC-EEEEEeCCCcc----cccccccccceEEEEEEccCCceeccCCCceeEEEeccccc--
Confidence 788999999 99877776644 79999999998 78999999999999999999999999999999999986541
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
-+.. ..|.+.|.|+.|+|-. ..|++++- ...-+|...... .... .....|.+++|..+|. +|+.
T Consensus 86 ------G~Lk-YSH~D~IQCMsFNP~~-h~LasCsL-sdFglWS~~qK~-----V~K~-kss~R~~~CsWtnDGq-ylal 149 (1081)
T KOG1538|consen 86 ------GILK-YSHNDAIQCMSFNPIT-HQLASCSL-SDFGLWSPEQKS-----VSKH-KSSSRIICCSWTNDGQ-YLAL 149 (1081)
T ss_pred ------ceee-eccCCeeeEeecCchH-HHhhhcch-hhccccChhhhh-----HHhh-hhheeEEEeeecCCCc-EEEE
Confidence 1222 3599999999999998 78888876 457788876543 1111 1345789999999999 6999
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-----EEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-----LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-----~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
|-.+|+|.|-+... ..+.....+.+...+|.+++|+|... .+++..-..++.++.+. ++.+..-+.-.-
T Consensus 150 G~~nGTIsiRNk~g--Eek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls----G~~Igk~r~L~F 223 (1081)
T KOG1538|consen 150 GMFNGTISIRNKNG--EEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS----GKQIGKDRALNF 223 (1081)
T ss_pred eccCceEEeecCCC--CcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec----ceeecccccCCC
Confidence 99999999986542 22223334467788999999999642 78888888888888884 555554444445
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
.-.++++.|+|. +++.||.|+.+.+|--... .+-.......-|..++.+|++....+++.++
T Consensus 224 dP~CisYf~NGE-y~LiGGsdk~L~~fTR~Gv-----------------rLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDG 285 (1081)
T KOG1538|consen 224 DPCCISYFTNGE-YILLGGSDKQLSLFTRDGV-----------------RLGTVGEQDSWIWTVQAKPNSQYVVVGCQDG 285 (1081)
T ss_pred CchhheeccCCc-EEEEccCCCceEEEeecCe-----------------EEeeccccceeEEEEEEccCCceEEEEEccC
Confidence 567899999985 8899999999999976544 3333333445799999999998888888777
Q ss_pred CeEEEEe
Q psy4510 493 GFNIFRT 499 (812)
Q Consensus 493 ~~~~~~~ 499 (812)
.+-.|..
T Consensus 286 TiACyNl 292 (1081)
T KOG1538|consen 286 TIACYNL 292 (1081)
T ss_pred eeehhhh
Confidence 7766654
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-19 Score=191.84 Aligned_cols=277 Identities=13% Similarity=0.158 Sum_probs=212.4
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
.+|....+.|+|.|+| ..|++++.||.|++|+...... ....+..+...|.+++...+ .|++|+.+++|.+|.
T Consensus 10 yaht~G~t~i~~d~~g-efi~tcgsdg~ir~~~~~sd~e---~P~ti~~~g~~v~~ia~~s~---~f~~~s~~~tv~~y~ 82 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDG-EFICTCGSDGDIRKWKTNSDEE---EPETIDISGELVSSIACYSN---HFLTGSEQNTVLRYK 82 (933)
T ss_pred hhccCceEEEEEcCCC-CEEEEecCCCceEEeecCCccc---CCchhhccCceeEEEeeccc---ceEEeeccceEEEee
Confidence 3688889999999999 6999999999999999876621 22333337778888876544 599999999999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
...+.....+..+ .-++++++++.+|+++|.|+.|-.|++-++. .......+++|.++|.++.|+|.+ .+||
T Consensus 83 fps~~~~~iL~Rf----tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~---D~s~~~~lrgh~apVl~l~~~p~~-~fLA 154 (933)
T KOG1274|consen 83 FPSGEEDTILARF----TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD---DSSQEKVLRGHDAPVLQLSYDPKG-NFLA 154 (933)
T ss_pred CCCCCccceeeee----eccceEEEEecCCcEEEeecCceeEEEEecc---ccchheeecccCCceeeeeEcCCC-CEEE
Confidence 9876554444443 6789999999999999999999999999998 466788899999999999999997 6999
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
+.+.||.|++||+..... .+...+-
T Consensus 155 vss~dG~v~iw~~~~~~~-----------------~~tl~~v-------------------------------------- 179 (933)
T KOG1274|consen 155 VSSCDGKVQIWDLQDGIL-----------------SKTLTGV-------------------------------------- 179 (933)
T ss_pred EEecCceEEEEEcccchh-----------------hhhcccC--------------------------------------
Confidence 999999999999986632 1000000
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccc
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRG 588 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 588 (812)
.|+. . .....
T Consensus 180 --------------~k~n-~-------------------------------------------------------~~~s~ 189 (933)
T KOG1274|consen 180 --------------DKDN-E-------------------------------------------------------FILSR 189 (933)
T ss_pred --------------Cccc-c-------------------------------------------------------ccccc
Confidence 0000 0 00012
Q ss_pred eEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec--CCCCceEEEEeCC
Q psy4510 589 CINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSS 666 (812)
Q Consensus 589 ~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gh~~~V~~l~~sp 666 (812)
.+..++|+|+|..+++. ..|+.|++|+..+.. +...++ -|...+..++|+|
T Consensus 190 i~~~~aW~Pk~g~la~~--~~d~~Vkvy~r~~we-------------------------~~f~Lr~~~~ss~~~~~~wsP 242 (933)
T KOG1274|consen 190 ICTRLAWHPKGGTLAVP--PVDNTVKVYSRKGWE-------------------------LQFKLRDKLSSSKFSDLQWSP 242 (933)
T ss_pred eeeeeeecCCCCeEEee--ccCCeEEEEccCCce-------------------------eheeecccccccceEEEEEcC
Confidence 56678999997777777 689999999998876 233332 3444599999999
Q ss_pred CCCCeEEecCCCceEEEEecC------CCceeEEEEecCCCCEEEeecCCCeE
Q psy4510 667 TEPGVLATGDCKRNIHIWTPR------EAGAWSVYLYTNRFGVLATGDCKRNI 713 (812)
Q Consensus 667 ~~~~~las~s~Dg~v~iWd~~------~~~~~~~~~~s~dg~~lasgs~dg~i 713 (812)
.|.+||+++.||.|.|||++ ....+++.++.|++..|-.-...|..
T Consensus 243 -nG~YiAAs~~~g~I~vWnv~t~~~~~~~~~Vc~~aw~p~~n~it~~~~~g~~ 294 (933)
T KOG1274|consen 243 -NGKYIAASTLDGQILVWNVDTHERHEFKRAVCCEAWKPNANAITLITALGTL 294 (933)
T ss_pred -CCcEEeeeccCCcEEEEecccchhccccceeEEEecCCCCCeeEEEeecccc
Confidence 79999999999999999999 47778888888888755444444433
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-20 Score=173.72 Aligned_cols=308 Identities=16% Similarity=0.296 Sum_probs=222.2
Q ss_pred cccCCCCCEEEEEEcC----CCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCC----CCEEEEE
Q psy4510 314 PLVGHTNSVEDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRT----EPLIVSG 384 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~----~~~l~sg 384 (812)
....|..+|..++|++ +...++++.+. ..+.+|..........+..... .|......++|+-+ ..++|+|
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~ 111 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAG 111 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEee
Confidence 3456888999999984 34446776665 6788887753322223333333 36777788888754 2489999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
|.-|.|+|.|+. +++....+.+|...|..|.++|..++++++++.|..|++|++++... +
T Consensus 112 G~~GvIrVid~~---~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~C-----------------v 171 (385)
T KOG1034|consen 112 GYLGVIRVIDVV---SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVC-----------------V 171 (385)
T ss_pred cceeEEEEEecc---hhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeE-----------------E
Confidence 999999999998 57888999999999999999999999999999999999999987721 1
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEe
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 544 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~ 544 (812)
.+..
T Consensus 172 ~VfG---------------------------------------------------------------------------- 175 (385)
T KOG1034|consen 172 AVFG---------------------------------------------------------------------------- 175 (385)
T ss_pred EEec----------------------------------------------------------------------------
Confidence 1000
Q ss_pred ecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc--
Q psy4510 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL-- 622 (812)
Q Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~-- 622 (812)
-..+|...|.++.|+++|.+++++ |.|.+|++|++....
T Consensus 176 -------------------------------------G~egHrdeVLSvD~~~~gd~i~Sc--GmDhslk~W~l~~~~f~ 216 (385)
T KOG1034|consen 176 -------------------------------------GVEGHRDEVLSVDFSLDGDRIASC--GMDHSLKLWRLNVKEFK 216 (385)
T ss_pred -------------------------------------ccccccCcEEEEEEcCCCCeeecc--CCcceEEEEecChhHHh
Confidence 134677899999999999999998 999999999998442
Q ss_pred cccCCcccccccccccCCC----CCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC----------
Q psy4510 623 QTVDDPFQLAEHNKKRGKG----PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---------- 688 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~---------- 688 (812)
..++.... +....... +........+-.-|...|-|+.|-- .+++|-|.++.|..|....
T Consensus 217 ~~lE~s~~---~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~g---d~ilSkscenaI~~w~pgkl~e~~~~vkp 290 (385)
T KOG1034|consen 217 NKLELSIT---YSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFG---DFILSKSCENAIVCWKPGKLEESIHNVKP 290 (385)
T ss_pred hhhhhhcc---cCCCCccCcCCccccccccccccccccchHHHHHHHh---hheeecccCceEEEEecchhhhhhhccCC
Confidence 11111111 11111110 0011111224567899999999964 5999999999999999822
Q ss_pred ---------------CceeEE-EEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC--CcceeEeEEecCCcee
Q psy4510 689 ---------------AGAWSV-YLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH--TNSVEDLQWSPGEKRV 750 (812)
Q Consensus 689 ---------------~~~~~~-~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH--~~~V~~l~fs~dg~~~ 750 (812)
+.+|-+ .+|.|-++.||.|...|.|++||++..... ...++..+ ...|...+||.||. +
T Consensus 291 ~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~--~~ttl~~s~~~~tVRQ~sfS~dgs-~ 367 (385)
T KOG1034|consen 291 PESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP--KCTTLTHSKSGSTVRQTSFSRDGS-I 367 (385)
T ss_pred CccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc--cCceEEeccccceeeeeeecccCc-E
Confidence 122222 246777899999999999999999887642 22333333 25799999999999 8
Q ss_pred EEeeccCCceEEeeec
Q psy4510 751 LASCSVDRSNRIGARR 766 (812)
Q Consensus 751 L~s~s~Dg~i~iWd~~ 766 (812)
|+....|++|.=||..
T Consensus 368 lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 368 LVLVCDDGTVWRWDRV 383 (385)
T ss_pred EEEEeCCCcEEEEEee
Confidence 9999999999999864
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-19 Score=183.55 Aligned_cols=175 Identities=18% Similarity=0.367 Sum_probs=138.9
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
.|..++|-|||..|+.+. +..+.+||...| ..+.++++|++.|++++|+.+| .++|+|+.|..|.+|...-
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG-------~llqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~kl 84 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDG-------TLLQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKL 84 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCc-------ccccccccccceEEEEEEccCC-ceeccCCCceeEEEecccc
Confidence 899999999999887764 456889999986 8889999999999999999999 8999999999999999776
Q ss_pred CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
.+ ... -.|...|.|+.|+|-.. .|++|+- ...-+|..... .+.. ......+.+++|+.+|++|+.|
T Consensus 85 EG-----~Lk-YSH~D~IQCMsFNP~~h-~LasCsL-sdFglWS~~qK----~V~K--~kss~R~~~CsWtnDGqylalG 150 (1081)
T KOG1538|consen 85 EG-----ILK-YSHNDAIQCMSFNPITH-QLASCSL-SDFGLWSPEQK----SVSK--HKSSSRIICCSWTNDGQYLALG 150 (1081)
T ss_pred cc-----eee-eccCCeeeEeecCchHH-Hhhhcch-hhccccChhhh----hHHh--hhhheeEEEeeecCCCcEEEEe
Confidence 55 122 24999999999999888 5888886 45678887622 1221 2345679999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
-.+|+|.|-+-.. ...-.+..-.+...+|.+++|+|..
T Consensus 151 ~~nGTIsiRNk~g-Eek~~I~Rpgg~Nspiwsi~~~p~s 188 (1081)
T KOG1538|consen 151 MFNGTISIRNKNG-EEKVKIERPGGSNSPIWSICWNPSS 188 (1081)
T ss_pred ccCceEEeecCCC-CcceEEeCCCCCCCCceEEEecCCC
Confidence 9999999986532 1112233334568899999999974
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-20 Score=171.65 Aligned_cols=273 Identities=16% Similarity=0.274 Sum_probs=199.0
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccc--cccccC-------CCCCCeeeeeEc-------CCCCcEEEeeCC
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV--DQKPLG-------GHTNSAEDLQWS-------DLKTALQTVDDP 244 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~--~~~~l~-------~h~~~V~~l~~s-------~~~~~l~s~~~d 244 (812)
.+.||| +|..|.+-+.|..+++|++....--.. ....+. .....|+..+|- |+..++++.+.+
T Consensus 54 gckWSP-DGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~ 132 (406)
T KOG2919|consen 54 GCKWSP-DGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRD 132 (406)
T ss_pred cceeCC-CCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecccc
Confidence 478999 999999999999999998764211000 001111 123456666664 677899999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcE---EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc----ccC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG---FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP----LVG 317 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v---~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~----~~~ 317 (812)
.-|.+||.-+| +.+..+....|..++ .+|+|+|+| ..|++|. .+.|+++|+...++......+ -.+
T Consensus 133 ~PIh~wdaftG-----~lraSy~~ydh~de~taAhsL~Fs~DG-eqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~g 205 (406)
T KOG2919|consen 133 QPIHLWDAFTG-----KLRASYRAYDHQDEYTAAHSLQFSPDG-EQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFG 205 (406)
T ss_pred Cceeeeecccc-----ccccchhhhhhHHhhhhheeEEecCCC-CeEeecc-cceEEEeeccCCCCCCcchhhhhccccc
Confidence 99999999998 344444445566554 689999999 6777776 589999999554431111111 234
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLR 396 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~ 396 (812)
..+.|.+++|+|.....++.++.-.++-|+.-. ...++..+ .+|.+.|+-++|.++|+.|++|.. +-.|..||+|
T Consensus 206 q~giisc~a~sP~~~~~~a~gsY~q~~giy~~~---~~~pl~ll-ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 206 QKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD---GRRPLQLL-GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIR 281 (406)
T ss_pred ccceeeeeeccCCCCcceeeecccceeeeEecC---CCCceeee-cccCCCeeeEEeccCcCeecccccCCCeEEEEeeh
Confidence 477899999999888789999998888887665 33445555 799999999999999999999876 6789999999
Q ss_pred CCCCCCceEEcccCCC-CEEEEEE--ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 397 RFKKGSSVATFKHHTA-PVTTVEW--HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~-~v~~v~~--~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
. ...++..+..|.+ .=..|.| .|.+ ++|++|+.||.|++||+..... ...........+
T Consensus 282 ~--~~~pv~~L~rhv~~TNQRI~FDld~~~-~~LasG~tdG~V~vwdlk~~gn---------------~~sv~~~~sd~v 343 (406)
T KOG2919|consen 282 Y--SRDPVYALERHVGDTNQRILFDLDPKG-EILASGDTDGSVRVWDLKDLGN---------------EVSVTGNYSDTV 343 (406)
T ss_pred h--ccchhhhhhhhccCccceEEEecCCCC-ceeeccCCCccEEEEecCCCCC---------------cccccccccccc
Confidence 7 6778888888866 2234444 5776 6999999999999999988532 122222334578
Q ss_pred eEEEEcCCCC
Q psy4510 474 KELHWHPQLP 483 (812)
Q Consensus 474 ~~~~~~p~~~ 483 (812)
+.++++|--|
T Consensus 344 NgvslnP~mp 353 (406)
T KOG2919|consen 344 NGVSLNPIMP 353 (406)
T ss_pred cceecCcccc
Confidence 9999999844
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-18 Score=183.06 Aligned_cols=493 Identities=14% Similarity=0.102 Sum_probs=286.2
Q ss_pred CccCcCCCCCceEEEEeCCCCC--CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC----------
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK---------- 235 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~--~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~---------- 235 (812)
.+..+.+|.++++.+.+.|... .++.+++.+|.|++||...+.........+.-|..... +++-...
T Consensus 49 ~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~-~~~a~~s~~~~~s~~~~ 127 (792)
T KOG1963|consen 49 CITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYK-PAQADISANVYVSVEDY 127 (792)
T ss_pred hhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEec-hhHhCccceeEeecccc
Confidence 3446668999999999988433 46779999999999999888743322222222221111 1111111
Q ss_pred CcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc
Q psy4510 236 TALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 236 ~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 313 (812)
..+.+.+ ..+.++-+.+.+- ...+...+..|.. -.++.+++.+ .+...-.+..+.+|...+.........
T Consensus 128 ~~~~~~s~~~~~q~~~~~~~t~-----~~~~~d~~~~~~~-~~~I~~~~~g--e~~~i~~~~~~~~~~v~~~~~~~~~~~ 199 (792)
T KOG1963|consen 128 SILTTFSKKLSKQSSRFVLATF-----DSAKGDFLKEHQE-PKSIVDNNSG--EFKGIVHMCKIHIYFVPKHTKHTSSRD 199 (792)
T ss_pred eeeeecccccccceeeeEeeec-----cccchhhhhhhcC-CccEEEcCCc--eEEEEEEeeeEEEEEecccceeeccch
Confidence 1111111 1111222222111 1112222233322 3577888876 333333456799999988652222223
Q ss_pred cccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
.-..|...+++.+++|+++ ++|++..||.|.+|.--..+......+...-|...|++++|+++|.+|++||..|.+.+|
T Consensus 200 ~~~~Htf~~t~~~~spn~~-~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~W 278 (792)
T KOG1963|consen 200 ITVHHTFNITCVALSPNER-YLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLW 278 (792)
T ss_pred hhhhhcccceeEEeccccc-eEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEE
Confidence 3345777899999999999 699999999999996543111222233336789999999999999999999999999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCc-eEEeecCCCc
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ-LLFIHLGQKE 472 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 472 (812)
.+.+.+ .+-++.-.++|..+.++|++ .+.+....|++|.+..+...... .....+.+. .....+.+.-
T Consensus 279 q~~T~~----kqfLPRLgs~I~~i~vS~ds-~~~sl~~~DNqI~li~~~dl~~k------~tIsgi~~~~~~~k~~~~~l 347 (792)
T KOG1963|consen 279 QLETGK----KQFLPRLGSPILHIVVSPDS-DLYSLVLEDNQIHLIKASDLEIK------STISGIKPPTPSTKTRPQSL 347 (792)
T ss_pred eecCCC----cccccccCCeeEEEEEcCCC-CeEEEEecCceEEEEeccchhhh------hhccCccCCCcccccccccc
Confidence 998532 33344457899999999997 46777777999999988654211 011111111 0011122234
Q ss_pred eeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccc
Q psy4510 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTST 552 (812)
Q Consensus 473 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 552 (812)
.+.++++|.....++-+..+.+..|+.........+.. .....++..
T Consensus 348 ~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v-------~~~n~~~~~-------------------------- 394 (792)
T KOG1963|consen 348 TTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQV-------CDENYSDGD-------------------------- 394 (792)
T ss_pred ceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEE-------EeecccCCc--------------------------
Confidence 56777888555555555566667776555432211100 000000000
Q ss_pred ccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEee------cC--cceEEEEeccccccc
Q psy4510 553 EEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW------GE--VGKVGIWDLKTALQT 624 (812)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~------~~--dg~I~iwd~~~~~~~ 624 (812)
..+.-.+++++.+-.|.++++.-. .. .-.+++|-.....+.
T Consensus 395 -------------------------------~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt 443 (792)
T KOG1963|consen 395 -------------------------------VNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKT 443 (792)
T ss_pred -------------------------------ceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcce
Confidence 012225566666666766665411 11 235778877665432
Q ss_pred cCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCC-CCCCeEEecCCCceEEEEecCC-------C-------
Q psy4510 625 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPRE-------A------- 689 (812)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp-~~~~~las~s~Dg~v~iWd~~~-------~------- 689 (812)
... -......|...+.+.++.+ .....+++++.||.++||-+.+ +
T Consensus 444 ~~L--------------------~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~ 503 (792)
T KOG1963|consen 444 FIL--------------------NTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKA 503 (792)
T ss_pred eEE--------------------EEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEee
Confidence 100 1122356777666666654 2333899999999999999954 1
Q ss_pred ------ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce-eEEeeccCCceEE
Q psy4510 690 ------GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR-VLASCSVDRSNRI 762 (812)
Q Consensus 690 ------~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~-~L~s~s~Dg~i~i 762 (812)
......+|+.||..||++ .+++|.+||..+... +..+..--..++..++|...... ..+....-+.+.+
T Consensus 504 i~sy~k~~i~a~~fs~dGslla~s-~~~~Itiwd~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 579 (792)
T KOG1963|consen 504 IGSYHKTPITALCFSQDGSLLAVS-FDDTITIWDYDTKNE---LLCTEGSRNWPIAELLFTAQTQNDGALVHATQQRLSV 579 (792)
T ss_pred eeccccCcccchhhcCCCcEEEEe-cCCEEEEecCCChhh---hhccccccccchHhHhhhcccccccceeeccCceEeh
Confidence 223445789999666655 678899999988432 33333333334555554332110 1234445678888
Q ss_pred eeecCcc
Q psy4510 763 GARRDML 769 (812)
Q Consensus 763 Wd~~~~~ 769 (812)
|++..+.
T Consensus 580 WNll~~~ 586 (792)
T KOG1963|consen 580 WNLLSMS 586 (792)
T ss_pred Hhhhhhh
Confidence 9877664
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-19 Score=172.66 Aligned_cols=168 Identities=22% Similarity=0.398 Sum_probs=140.9
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-----ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-----WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
..+++.+.|.+...++|+||+.|..|++|.+..... .......+..|...|+++.|+|+|. +||||+.+|.|.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-lLASg~D~g~v~l 91 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-LLASGGDGGEVFL 91 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-eeeecCCCceEEE
Confidence 367999999998866999999999999998865432 2223567888999999999999999 8999999999999
Q ss_pred EECC--------C----CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCE
Q psy4510 347 WDTR--------V----INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV 414 (812)
Q Consensus 347 wd~~--------~----~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 414 (812)
|... + .+....+.....+|...|..++|+|+++++++|+.|..+++||++ .++.+..+..|...|
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~---~G~l~~~~~dh~~yv 168 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH---AGQLLAILDDHEHYV 168 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEec---cceeEeecccccccc
Confidence 9765 1 011123334447899999999999999999999999999999998 688899999999999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..++|.|.+ +++++-+.|...+.+.+...
T Consensus 169 qgvawDpl~-qyv~s~s~dr~~~~~~~~~~ 197 (434)
T KOG1009|consen 169 QGVAWDPLN-QYVASKSSDRHPEGFSAKLK 197 (434)
T ss_pred ceeecchhh-hhhhhhccCcccceeeeeee
Confidence 999999986 79999999987777776655
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-17 Score=180.77 Aligned_cols=252 Identities=27% Similarity=0.457 Sum_probs=199.4
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCC-CCeeeeeE-cCCCC-cEEEeeC-CCce
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQW-SDLKT-ALQTVDD-PFQL 247 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~-s~~~~-~l~s~~~-d~~i 247 (812)
..+|...+.++.+.+ .+..++.++.|+.+.+|+...... ....+.++. ..+..+.+ ++++. .++..+. ++.+
T Consensus 61 ~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 136 (466)
T COG2319 61 LRGHEDSITSIAFSP-DGELLLSGSSDGTIKLWDLDNGEK---LIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTV 136 (466)
T ss_pred eeeccceEEEEEECC-CCcEEEEecCCCcEEEEEcCCCce---eEEEEeccCCCceeeEEEECCCcceEEeccCCCCccE
Confidence 347899999999999 999999999999999999887651 233344433 47777777 78887 5555444 9999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
.+|+... .......+..|...|..++|+|++ ..+++++. ++.+++|++.... ....+.+|...|.+++
T Consensus 137 ~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~ 205 (466)
T COG2319 137 KLWDLST------PGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLRTGK----PLSTLAGHTDPVSSLA 205 (466)
T ss_pred EEEEecC------CCeEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcCCCc----eEEeeccCCCceEEEE
Confidence 9999986 136778899999999999999998 58888875 9999999999855 4666777999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|++..++++++.|+.|++||.+ ....+......|...+ ...|++++.++++++.|+.+++|+++... ..+..
T Consensus 206 ~~~~~~~~~~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~ 279 (466)
T COG2319 206 FSPDGGLLIASGSSDGTIRLWDLS---TGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSS--SLLRT 279 (466)
T ss_pred EcCCcceEEEEecCCCcEEEEECC---CCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCC--cEEEE
Confidence 999987456666999999999887 3333331236777765 44899999888899999999999998532 23444
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+..|...|.++.|+|++ ..+++++.|+.+.+|++....
T Consensus 280 ~~~~~~~v~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~ 317 (466)
T COG2319 280 LSGHSSSVLSVAFSPDG-KLLASGSSDGTVRLWDLETGK 317 (466)
T ss_pred EecCCccEEEEEECCCC-CEEEEeeCCCcEEEEEcCCCc
Confidence 46789999999999965 466668889999999887763
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-17 Score=182.75 Aligned_cols=364 Identities=27% Similarity=0.430 Sum_probs=273.7
Q ss_pred ccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCC-cEEEEEe-cCCCCCEEEEEeC-C
Q psy4510 218 PLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT-EGFAMDW-SSTEPGVLATGDC-K 294 (812)
Q Consensus 218 ~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~-sp~~~~~l~sg~~-d 294 (812)
.+..|...|.++.+.+.+..++.++.++.+.+|+...+ ...+..+.++.. .+..+.+ ++++...++..+. |
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 133 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNG------EKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLD 133 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCC------ceeEEEEeccCCCceeeEEEECCCcceEEeccCCCC
Confidence 56789999999999999999999999999999999874 125666766443 7777777 7877425555444 9
Q ss_pred CcEEEEeCCC-CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPRE-AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
+.+.+|++.. .. ....+..|...|.+++|+|++. .+++++. |+.+++|++.. ...+..+ ..|...|.++
T Consensus 134 ~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~v~~~ 204 (466)
T COG2319 134 GTVKLWDLSTPGK----LIRTLEGHSESVTSLAFSPDGK-LLASGSSLDGTIKLWDLRT---GKPLSTL-AGHTDPVSSL 204 (466)
T ss_pred ccEEEEEecCCCe----EEEEEecCcccEEEEEECCCCC-EEEecCCCCCceEEEEcCC---CceEEee-ccCCCceEEE
Confidence 9999999987 33 4677888999999999999999 5777775 99999999984 3344444 5699999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceE-EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+|+|++. ++++++.|+.|++||.+ .+..+. .+..|...+ -..|+|++ .++++++.|+.+++|++.....
T Consensus 205 ~~~~~~~~~~~~~~~d~~i~~wd~~---~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~---- 275 (466)
T COG2319 205 AFSPDGGLLIASGSSDGTIRLWDLS---TGKLLRSTLSGHSDSV-VSSFSPDG-SLLASGSSDGTIRLWDLRSSSS---- 275 (466)
T ss_pred EEcCCcceEEEEecCCCcEEEEECC---CCcEEeeecCCCCcce-eEeECCCC-CEEEEecCCCcEEEeeecCCCc----
Confidence 9999998 66666999999999887 455566 688888875 44899987 6888999999999999986620
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeE
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTI 530 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~ 530 (812)
.+.
T Consensus 276 ----------------------------------~~~------------------------------------------- 278 (466)
T COG2319 276 ----------------------------------LLR------------------------------------------- 278 (466)
T ss_pred ----------------------------------EEE-------------------------------------------
Confidence 000
Q ss_pred EEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc
Q psy4510 531 ISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV 610 (812)
Q Consensus 531 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d 610 (812)
....|...+.++.|.|++..++++ +.|
T Consensus 279 ---------------------------------------------------~~~~~~~~v~~~~~~~~~~~~~~~--~~d 305 (466)
T COG2319 279 ---------------------------------------------------TLSGHSSSVLSVAFSPDGKLLASG--SSD 305 (466)
T ss_pred ---------------------------------------------------EEecCCccEEEEEECCCCCEEEEe--eCC
Confidence 001223356667788877778875 566
Q ss_pred ceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee--cCCCCceEEEEeCCCCCCeEEec-CCCceEEEEecC
Q psy4510 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATG-DCKRNIHIWTPR 687 (812)
Q Consensus 611 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gh~~~V~~l~~sp~~~~~las~-s~Dg~v~iWd~~ 687 (812)
+.+.+|+..... ..... .+|...+..+.| +.++..++.+ ..|+.+++|++.
T Consensus 306 ~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~ 359 (466)
T COG2319 306 GTVRLWDLETGK-------------------------LLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLR 359 (466)
T ss_pred CcEEEEEcCCCc-------------------------eEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecC
Confidence 889999887765 22222 478888999999 4243455555 788999999998
Q ss_pred CCce---------eEEEEecCCCCEEEe-ecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccC
Q psy4510 688 EAGA---------WSVYLYTNRFGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 757 (812)
Q Consensus 688 ~~~~---------~~~~~~s~dg~~las-gs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~D 757 (812)
.... .....++++ ..+.. +..++.+.+|+...... ......+...+....+++++. ++++++.+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 433 (466)
T COG2319 360 TGKPLKTLEGHSNVLSVSFSPD-GRVVSSGSTDGTVRLWDLSTGSL----LRNLDGHTSRVTSLDFSPDGK-SLASGSSD 433 (466)
T ss_pred CCceeEEecCCceEEEEEECCC-CCEEEEecCCCceEEEecccCee----eeeccCCCCcEEEEEECCCCc-EEEEecCC
Confidence 7441 122234443 44444 78999999999988763 223333327899999999999 79999999
Q ss_pred CceEEeeecC
Q psy4510 758 RSNRIGARRD 767 (812)
Q Consensus 758 g~i~iWd~~~ 767 (812)
+++++|++..
T Consensus 434 ~~~~~~~~~~ 443 (466)
T COG2319 434 NTIRLWDLKT 443 (466)
T ss_pred CcEEEEeccC
Confidence 9999999988
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.8e-20 Score=173.20 Aligned_cols=193 Identities=18% Similarity=0.362 Sum_probs=148.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-CCeEEEEEECCCeEEEEECCCCCcccceeecCCc
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG-EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA 364 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 364 (812)
..+|++-..|.|++||..+++ ....++++...++.+.|... +.+.+.+|+.||+|++||+|....... ... ..
T Consensus 41 ~~vav~lSngsv~lyd~~tg~----~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~-~~~-~~ 114 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQ----LLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR-ISW-TQ 114 (376)
T ss_pred eeEEEEecCCeEEEEeccchh----hhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh-eec-cC
Confidence 568888889999999999987 68889999999999999874 666899999999999999997654433 333 33
Q ss_pred CC-CCeEEEEEcCCCCEEEEEeC----CCcEEEEecCCCCCCCceE-EcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 365 HT-SDVNVISWNRTEPLIVSGGD----DGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 365 ~~-~~v~~l~~~~~~~~l~sg~~----dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
++ .+..|++.+..++++++|+. +-.|.+||+|. ..+++. -...|...|+++.|+|.++.+|++||.||-|.+
T Consensus 115 ~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~--~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnl 192 (376)
T KOG1188|consen 115 QSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRS--EQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNL 192 (376)
T ss_pred CCCCcceEeeccCcCCeEEeccccccCceEEEEEEecc--ccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEe
Confidence 43 67888888878889998864 67899999997 334344 346799999999999999999999999999999
Q ss_pred EEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC-EEEEEeCCCeEEEEe
Q psy4510 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG-TIISTANSGFNIFRT 499 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~~~~~~~~~~~~~ 499 (812)
+|+....... .++.+......|..+.|+..+-. ++..+....+.+|..
T Consensus 193 fD~~~d~EeD-------------aL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~el 241 (376)
T KOG1188|consen 193 FDTKKDNEED-------------ALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYEL 241 (376)
T ss_pred eecCCCcchh-------------hHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEc
Confidence 9998774321 34444455567999999988622 333344445555543
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=169.22 Aligned_cols=238 Identities=19% Similarity=0.326 Sum_probs=180.6
Q ss_pred CceEEEEeC-------CCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCe---eeeeEcCCCCcEEEeeCCCc
Q psy4510 177 TEGFAMDWS-------STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA---EDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 177 ~~i~~~~~s-------p~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V---~~l~~s~~~~~l~s~~~d~~ 246 (812)
..|...+|- | +.+++|+.+.+.-|+|||.-+++.. .......|...+ .+++|+|||.+|.+| ....
T Consensus 105 ~tvydy~wYs~M~s~qP-~t~l~a~ssr~~PIh~wdaftG~lr--aSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrc 180 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQP-STNLFAVSSRDQPIHLWDAFTGKLR--ASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRC 180 (406)
T ss_pred CEEEEEEeeeccccCCC-ccceeeeccccCceeeeeccccccc--cchhhhhhHHhhhhheeEEecCCCCeEeec-ccce
Confidence 446655554 5 7789999999999999999988721 222233455544 479999999999876 5688
Q ss_pred eEEeeCCCCCCCCCCCCCceEEc-----CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFS-----GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~-----~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
|+++|+.... ...++++.. +..+-+.+++|+|.....++.|+...++-|+.-...+ +...+.+|.+.
T Consensus 181 irvFdt~RpG----r~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~----pl~llggh~gG 252 (406)
T KOG2919|consen 181 IRVFDTSRPG----RDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR----PLQLLGGHGGG 252 (406)
T ss_pred EEEeeccCCC----CCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC----ceeeecccCCC
Confidence 9999995421 112333322 3467889999999987899999999999999887776 67778899999
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC-CeEE--EEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-DVNV--ISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~--l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
|+.++|.++|++++.-+-.|-.|..||+|. ....+..+ ..|.. .-.. ....|.+++|++|+.||.|++||+..
T Consensus 253 vThL~~~edGn~lfsGaRk~dkIl~WDiR~--~~~pv~~L-~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~- 328 (406)
T KOG2919|consen 253 VTHLQWCEDGNKLFSGARKDDKILCWDIRY--SRDPVYAL-ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD- 328 (406)
T ss_pred eeeEEeccCcCeecccccCCCeEEEEeehh--ccchhhhh-hhhccCccceEEEecCCCCceeeccCCCccEEEEecCC-
Confidence 999999999997554445688999999995 33445555 44544 2223 44568899999999999999999986
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
.+..+..+..|...++.++++|-- .++++++.
T Consensus 329 -~gn~~sv~~~~sd~vNgvslnP~m-pilatssG 360 (406)
T KOG2919|consen 329 -LGNEVSVTGNYSDTVNGVSLNPIM-PILATSSG 360 (406)
T ss_pred -CCCcccccccccccccceecCccc-ceeeeccC
Confidence 466788889999999999999985 47777664
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-19 Score=171.53 Aligned_cols=335 Identities=15% Similarity=0.151 Sum_probs=219.9
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee--c-cccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV--D-QKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~-~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
...+.+|.+.|.+|.|+.++ .+|++|+.|..+++|++...-...+ + ...-..|.+.|.|++|..... .+.+|..+
T Consensus 49 qKD~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~-~~~SG~~~ 126 (609)
T KOG4227|consen 49 QKDVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENR-FLYSGERW 126 (609)
T ss_pred hhhhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCe-eEecCCCc
Confidence 34567899999999999997 8999999999999999865321110 1 122234668999999998777 69999999
Q ss_pred CeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 420 (812)
++|.+.|+.+.. .+..+. ....+.|..+..+|..+.|++.+.+|.|.+||.|.....-.+..+........++.|+
T Consensus 127 ~~VI~HDiEt~q---si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~ 203 (609)
T KOG4227|consen 127 GTVIKHDIETKQ---SIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFH 203 (609)
T ss_pred ceeEeeecccce---eeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeec
Confidence 999999998533 333331 2234589999999999999999999999999999633222233334445678899999
Q ss_pred cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
|..+.+|++.+..+-+.+||.+..+..... ......+ .+....-..+.|+|.+..+++.--...-..|+..
T Consensus 204 P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~--~~~~~~L-------~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~ 274 (609)
T KOG4227|consen 204 PETPALILVNSETGGPNVFDRRMQARPVYQ--RSMFKGL-------PQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFI 274 (609)
T ss_pred CCCceeEEeccccCCCCceeeccccchHHh--hhccccC-------cccchhhhheeeCCCCCeehhhhccCCCEEeeee
Confidence 999999999999999999999987542110 0000000 1111234677899987644433222222222222
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccc
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMN 580 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (812)
+..+ .|....-+|+ +.+
T Consensus 275 S~R~-----------~V~k~D~N~~--GY~-------------------------------------------------- 291 (609)
T KOG4227|consen 275 SQRC-----------FVLKSDHNPN--GYC-------------------------------------------------- 291 (609)
T ss_pred cccc-----------eeEeccCCCC--cce--------------------------------------------------
Confidence 2111 1111111111 100
Q ss_pred eEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceE
Q psy4510 581 SYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 660 (812)
Q Consensus 581 ~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 660 (812)
....+.+++|-.+.. +++| +++-.|++|.+........ .....+..............+.+++||..-+.
T Consensus 292 -----N~~T~KS~~F~~D~~-v~tG--SD~~~i~~WklP~~~ds~G--~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~N 361 (609)
T KOG4227|consen 292 -----NIKTIKSMTFIDDYT-VATG--SDHWGIHIWKLPRANDSYG--FTQIGHDEEEMPSEIFIEKELTVLRGHRSVPN 361 (609)
T ss_pred -----eeeeeeeeeeeccee-eecc--CcccceEEEecCCCccccC--ccccCcchhhCchhheecceeEEEeccccccc
Confidence 011455666755544 7777 8899999999976532211 01111211122222334456888999999999
Q ss_pred EEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 661 AMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 661 ~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
.|.|+| ...+|++.+..+.++||.-.
T Consensus 362 QVRF~~-H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 362 QVRFSQ-HNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred ceeecC-CcceEeccchhhheeccccc
Confidence 999999 78899999999999999864
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=174.82 Aligned_cols=295 Identities=16% Similarity=0.230 Sum_probs=212.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-----cccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-----QVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
.+|..+.|.+...+.|||||.|..|+||.+...... ......|..|...|+++.|+|+|..||+|+.+|.+.+|.
T Consensus 14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk 93 (434)
T KOG1009|consen 14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWK 93 (434)
T ss_pred CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEE
Confidence 679999999944459999999999999988765432 224457889999999999999999999999999999998
Q ss_pred CCCCCC---------CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 252 KKRGKG---------PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 252 ~~~~~~---------~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
...-.. ..........+.+|...|+.++|+|++ ..+++|+.|..+++||+..+. ....+.+|...|
T Consensus 94 ~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~G~----l~~~~~dh~~yv 168 (434)
T KOG1009|consen 94 QGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHAGQ----LLAILDDHEHYV 168 (434)
T ss_pred ecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEeccce----eEeecccccccc
Confidence 762100 001123345678999999999999999 899999999999999999998 678888999999
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--ec--C-----------CcCC----CCeEEEEEcCCCCEEEE
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML--TL--P-----------NAHT----SDVNVISWNRTEPLIVS 383 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~--~-----------~~~~----~~v~~l~~~~~~~~l~s 383 (812)
..++|.|-++ ++++-+.|...+.+.+.......++. .+ . --|. .-...++|+|+|.++++
T Consensus 169 qgvawDpl~q-yv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvt 247 (434)
T KOG1009|consen 169 QGVAWDPLNQ-YVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVT 247 (434)
T ss_pred ceeecchhhh-hhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEc
Confidence 9999999998 58888888877777665322211111 00 0 0111 12346789999998887
Q ss_pred EeC----CC-----cEEEEecCCCCCCCceEEcccCCCCEEEEEEccC-----------------CCcEEEEEECCCCEE
Q psy4510 384 GGD----DG-----CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT-----------------ESSTFASGGADDQIA 437 (812)
Q Consensus 384 g~~----dg-----~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----------------~~~~l~s~~~dg~v~ 437 (812)
... .+ ..++|+-.. ..++...+.....++..+.|+|- -..++|.++. +.|.
T Consensus 248 Pag~~~~g~~~~~n~tYvfsrk~--l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svy 324 (434)
T KOG1009|consen 248 PAGLFKVGGGVFRNTSYVFSRKD--LKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVY 324 (434)
T ss_pred ccceeeeCCceeeceeEeecccc--ccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec-ceEE
Confidence 642 22 345665543 45677888877788777777653 0124556665 5699
Q ss_pred EEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 438 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
+||..+... -.....-+-..|++++|++++..++++ +.||+.-
T Consensus 325 vydtq~~~P---------------~~~v~nihy~~iTDiaws~dg~~l~vS-S~DGyCS 367 (434)
T KOG1009|consen 325 VYDTQTLEP---------------LAVVDNIHYSAITDIAWSDDGSVLLVS-STDGFCS 367 (434)
T ss_pred Eeccccccc---------------eEEEeeeeeeeecceeecCCCcEEEEe-ccCCceE
Confidence 999887632 222233334589999999998655554 4555433
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=165.31 Aligned_cols=300 Identities=19% Similarity=0.262 Sum_probs=198.6
Q ss_pred eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
...+ ..|.+.|+++.|..++ +|++|..-|.|++|++. +.+.+..++ .|...|+.+.--|++ .|.+-+.|..+
T Consensus 7 ~fvL-Rp~~~~v~s~~fqa~~-rL~sg~~~G~V~~w~lq---t~r~~~~~r~~g~~~it~lq~~p~d--~l~tqgRd~~L 79 (323)
T KOG0322|consen 7 FFVL-RPHSSSVTSVLFQANE-RLMSGLSVGIVKMWVLQ---TERDLPLIRLFGRLFITNLQSIPND--SLDTQGRDPLL 79 (323)
T ss_pred eeEe-ccccchheehhhccch-hhhcccccceEEEEEee---cCccchhhhhhccceeeceeecCCc--chhhcCCCceE
Confidence 4444 5889999999998777 49999999999999998 456677777 678899999999974 58999999999
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKE 516 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (812)
.+|++... .....|. -.++++.|.+. -+...+...
T Consensus 80 ~lw~ia~s-----------------~~i~i~S--i~~nslgFCrf---Sl~~~~k~~----------------------- 114 (323)
T KOG0322|consen 80 ILWTIAYS-----------------AFISIHS--IVVNSLGFCRF---SLVKKPKNS----------------------- 114 (323)
T ss_pred EEEEccCc-----------------ceEEEee--eeccccccccc---eeccCCCcc-----------------------
Confidence 99999875 2222222 23445555442 111111000
Q ss_pred eeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEE-
Q psy4510 517 IKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRT- 595 (812)
Q Consensus 517 i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~- 595 (812)
..+.+.|.. +........ +...-.+.+.+ ....+..+.+.+..+
T Consensus 115 -eqll~yp~r----------gsde~h~~D------~g~~tqv~i~d------------------d~~~~Klgsvmc~~~~ 159 (323)
T KOG0322|consen 115 -EQLLEYPSR----------GSDETHKQD------GGDTTQVQIAD------------------DSERSKLGSVMCQDKD 159 (323)
T ss_pred -hhheecCCc----------ccchhhhhc------cCccceeEccC------------------chhccccCceeeeecc
Confidence 011111110 000000000 00000000000 001122234444442
Q ss_pred eccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEec
Q psy4510 596 CQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 596 s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~ 675 (812)
..++++++...|-++|.|.+||+.++...+..+.. .+.......|..+|+++.|.+ .-..=++|
T Consensus 160 ~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~---------------~kv~~~~ash~qpvlsldyas-~~~rGisg 223 (323)
T KOG0322|consen 160 HACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQS---------------SKVESPNASHKQPVLSLDYAS-SCDRGISG 223 (323)
T ss_pred ccccceEEEEEeccCCeEEEEEccCCceeeccccc---------------cccccchhhccCcceeeeech-hhcCCcCC
Confidence 22455444444489999999999987543322222 123444567999999999988 44466788
Q ss_pred CCCceEEEEecCCC--c------------eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 676 DCKRNIHIWTPREA--G------------AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 676 s~Dg~v~iWd~~~~--~------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
+.+..+..|++.-. . -+.-..+-||++.+|+++.|++||||..++.. .+..++.|++.|++|
T Consensus 224 ga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~----pLAVLkyHsagvn~v 299 (323)
T KOG0322|consen 224 GADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN----PLAVLKYHSAGVNAV 299 (323)
T ss_pred CccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCC----chhhhhhhhcceeEE
Confidence 88889999998751 1 11233578999999999999999999999998 578999999999999
Q ss_pred EEecCCceeEEeeccCCceEEeee
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+|+|+.. ++|++|.|++|.+|++
T Consensus 300 Afspd~~-lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 300 AFSPDCE-LMAAASKDARISLWKL 322 (323)
T ss_pred EeCCCCc-hhhhccCCceEEeeec
Confidence 9999988 9999999999999986
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.9e-19 Score=169.78 Aligned_cols=247 Identities=16% Similarity=0.265 Sum_probs=184.3
Q ss_pred CCCCeEEEe---cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCC
Q psy4510 187 TEPGVLATG---DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPT 262 (812)
Q Consensus 187 ~~~~~lat~---~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~ 262 (812)
.++.+||.. +..|...+--+..-.+.....-.+.||+++|..++|+|-. ..||+|+.|.+|.||.+..+.......
T Consensus 42 vNPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lt 121 (472)
T KOG0303|consen 42 VNPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLT 121 (472)
T ss_pred cCCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcc
Confidence 366777652 3334454544444333333445678999999999999965 567899999999999997764333345
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.|+..+.||...|--++|+|...+.|++++.|.+|.+|++.++. ....+. |...|.++.|+.+|. +|++.+.|.
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tge----ali~l~-hpd~i~S~sfn~dGs-~l~TtckDK 195 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGE----ALITLD-HPDMVYSMSFNRDGS-LLCTTCKDK 195 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCc----eeeecC-CCCeEEEEEeccCCc-eeeeecccc
Confidence 88999999999999999999998999999999999999999997 344444 999999999999999 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCC-CeEEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTS-DVNVISWNRTEPLIVSGG---DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
.|||||.|++. .+..- .+|.+ .-..+.|-.++.++-||. .+..+.+||..++...-.+..+.. +..|.=--
T Consensus 196 kvRv~dpr~~~---~v~e~-~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PF 270 (472)
T KOG0303|consen 196 KVRVIDPRRGT---VVSEG-VAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPF 270 (472)
T ss_pred eeEEEcCCCCc---Eeeec-ccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEecc-CCceEEee
Confidence 99999999543 33333 45543 344566777888555554 367899999998765544555553 44555555
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|.|+.+-+.++|-.|+.|+.|.+...
T Consensus 271 yD~dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 271 YDPDTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred ecCCCCEEEEEecCCcceEEEEecCC
Confidence 77776434455556999999999876
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=160.49 Aligned_cols=292 Identities=15% Similarity=0.283 Sum_probs=209.9
Q ss_pred CeeeeeEcC---CCCcEEEee----CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCC----CEEEEEeC
Q psy4510 225 SAEDLQWSD---LKTALQTVD----DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP----GVLATGDC 293 (812)
Q Consensus 225 ~V~~l~~s~---~~~~l~s~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~----~~l~sg~~ 293 (812)
++.++.||. .+.+|+.|+ ..+.|.|-.+..... +.....+ ..|.-+++.+.|.|+.. .+|||++
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~---e~~~~a~-fd~~YP~tK~~wiPd~~g~~pdlLATs~- 120 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSG---ELVEDAN-FDHPYPVTKLMWIPDSKGVYPDLLATSS- 120 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCC---ceeccCC-CCCCCCccceEecCCccccCcchhhccc-
Confidence 466777763 234677776 345566655543210 1111112 36888999999999863 4577765
Q ss_pred CCcEEEEeCCCCCcceecccc-----ccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 294 KRNIHIWTPREAGAWQVDQKP-----LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~-----~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
-.+++|.+........+... -..+..++++..|+.-..+++.++|-|-+..|||+.++.. ..+.+..-+|...
T Consensus 121 -D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~-~~vkTQLIAHDKE 198 (364)
T KOG0290|consen 121 -DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS-GTVKTQLIAHDKE 198 (364)
T ss_pred -CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc-cceeeEEEecCcc
Confidence 57999999854321222222 2335679999999999888999999999999999996522 2244444799999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC-CCEEEEEcCCCCc
Q psy4510 369 VNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD-DQIALWDLAVERD 446 (812)
Q Consensus 369 v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~v~iwd~~~~~~ 446 (812)
|..|+|...+. +||+.|.||.+++||+|...-...+..-.....+...++|++.+.+++|+-..| ..|.+.|++....
T Consensus 199 V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~t 278 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCT 278 (364)
T ss_pred eeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCc
Confidence 99999999775 999999999999999997654444544444467899999999999999987765 4799999998743
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc----ccEEeecCCCCeeEEEE
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS----QLLFIHLGQKEIKELHW 522 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 522 (812)
.+.....++..|+.++|.|..+..++++++|...++|.+...+. ..+........|..+.|
T Consensus 279 ---------------pva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~W 343 (364)
T KOG0290|consen 279 ---------------PVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQW 343 (364)
T ss_pred ---------------ceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeee
Confidence 45556667779999999999999999999999887777665544 11222335579999999
Q ss_pred cCCCCCeEEEeeCCCc
Q psy4510 523 HPQLPGTIISTANSGF 538 (812)
Q Consensus 523 ~p~~~~~~i~~~~~~~ 538 (812)
++..+.-+..+.+...
T Consensus 344 s~~~~Dwiai~~~kkl 359 (364)
T KOG0290|consen 344 SSSQPDWIAICFGKKL 359 (364)
T ss_pred cccCCCEEEEEecCee
Confidence 9887655555554433
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-17 Score=165.88 Aligned_cols=261 Identities=18% Similarity=0.222 Sum_probs=187.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE--------cCCCCcEEEeeCCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--------SDLKTALQTVDDPF 245 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~--------s~~~~~l~s~~~d~ 245 (812)
-|...+.|+.|+. +...+.++..+-.+.-|++.+.... .+.-....|....+ -.....++.++.||
T Consensus 12 r~~e~vc~v~w~~-~eei~~~~dDh~~~~~~~~~~~s~~-----~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DG 85 (737)
T KOG1524|consen 12 RNSEKVCCVDWSS-NEEIYFVSDDHQIFKWSDVSRDSVE-----VAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDG 85 (737)
T ss_pred ccceeEEeecccc-cceEEEeccCceEEEeecccchhhh-----hhhCCcccCCccccccccccCCCCCcceEEEEcCCc
Confidence 4667778999998 7777777775544444455443321 11111111111000 01234788889999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.+.+-+-.. +.-.....|.+.+.+-.|+|+| .-|++++.||.|++|.-... ...++.....+|.|+
T Consensus 86 kf~il~k~~--------rVE~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWSrsGM-----LRStl~Q~~~~v~c~ 151 (737)
T KOG1524|consen 86 RFVILNKSA--------RVERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWSRSGM-----LRSTVVQNEESIRCA 151 (737)
T ss_pred eEEEecccc--------hhhhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEeccch-----HHHHHhhcCceeEEE
Confidence 998887544 5566788999999999999999 67889999999999985432 344555567799999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
+|.|+...++.+.+ +.+.|=-+. ....+... .+|.+-|.++.|++..+++++||.|-..+|||- .++++.
T Consensus 152 ~W~p~S~~vl~c~g--~h~~IKpL~---~n~k~i~W-kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~----~G~~Lf 221 (737)
T KOG1524|consen 152 RWAPNSNSIVFCQG--GHISIKPLA---ANSKIIRW-RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA----QGANLF 221 (737)
T ss_pred EECCCCCceEEecC--CeEEEeecc---cccceeEE-eccCcEEEEeecCccccceeecCCceeEEeecc----cCcccc
Confidence 99999998776665 556665555 23334555 799999999999999999999999999999998 578899
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
.-..|..+|++++|+|+ ..++.++. ++++ +... ..+.|..++|++++...
T Consensus 222 ~S~~~ey~ITSva~npd--~~~~v~S~-nt~R---~~~p------------------------~~GSifnlsWS~DGTQ~ 271 (737)
T KOG1524|consen 222 TSAAEEYAITSVAFNPE--KDYLLWSY-NTAR---FSSP------------------------RVGSIFNLSWSADGTQA 271 (737)
T ss_pred cCChhccceeeeeeccc--cceeeeee-eeee---ecCC------------------------CccceEEEEEcCCCcee
Confidence 99999999999999998 46676664 3455 2222 13578999999998766
Q ss_pred EEEEeCCCe
Q psy4510 486 IISTANSGF 494 (812)
Q Consensus 486 ~~~~~~~~~ 494 (812)
..+++.+.+
T Consensus 272 a~gt~~G~v 280 (737)
T KOG1524|consen 272 TCGTSTGQL 280 (737)
T ss_pred eccccCceE
Confidence 555555544
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-20 Score=195.11 Aligned_cols=285 Identities=18% Similarity=0.279 Sum_probs=224.0
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
++.|..+.||.+.|+|+.|.. .|.+++||+.|..|+||...+.. +...+.||.+.|+.++.+.....+++++.|.
T Consensus 180 mk~ikrLlgH~naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~----~lAs~rGhs~ditdlavs~~n~~iaaaS~D~ 254 (1113)
T KOG0644|consen 180 MKNIKRLLGHRNAVYCAIFDR-TGRYIITGSDDRLVKIWSMETAR----CLASCRGHSGDITDLAVSSNNTMIAAASNDK 254 (1113)
T ss_pred HHHHHHHHhhhhheeeeeecc-ccceEeecCccceeeeeeccchh----hhccCCCCccccchhccchhhhhhhhcccCc
Confidence 355666679999999999999 99999999999999999988877 8889999999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVED 324 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~ 324 (812)
.|++|.+..+ .|+..+.||++.|++++|+|-. +.+.||++++||.+-.....+ .+++. ....-+..
T Consensus 255 vIrvWrl~~~-------~pvsvLrghtgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~y~-prp~~~~~~~~~~s 321 (1113)
T KOG0644|consen 255 VIRVWRLPDG-------APVSVLRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRIYV-PRPLKFTEKDLVDS 321 (1113)
T ss_pred eEEEEecCCC-------chHHHHhccccceeeeccCccc-----cCCCCCceEeccccccccccC-CCCCCcccccceee
Confidence 9999999986 8999999999999999999963 677899999999882211111 12222 12356777
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+.|..++.. +++++.|+.-+.|..... ..+...+.-+.++.+- .+.+++-.+-.+++|++. .++.
T Consensus 322 ~~~~~~~~~-f~Tgs~d~ea~n~e~~~l----------~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~---~g~l 387 (1113)
T KOG0644|consen 322 ILFENNGDR-FLTGSRDGEARNHEFEQL----------AWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLY---TGQL 387 (1113)
T ss_pred eeccccccc-cccccCCcccccchhhHh----------hhhccceEEEeccccccccceeeeeeeEeeeeecc---cchh
Confidence 888888874 999999999998876521 1223333333333333 367777778889999998 5788
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
++.+.+|...+..+.++|.++.+..+++.||...|||+-.+.. .+..+ .++..+.+-.|++++.
T Consensus 388 ~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~p--------------ik~y~--~gh~kl~d~kFSqdgt 451 (1113)
T KOG0644|consen 388 LHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIP--------------IKHYF--IGHGKLVDGKFSQDGT 451 (1113)
T ss_pred hhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCc--------------ceeee--cccceeeccccCCCCc
Confidence 9999999999999999999998899999999999999987642 23333 4467788888999876
Q ss_pred CEEEEEeCCCeEEEE
Q psy4510 484 GTIISTANSGFNIFR 498 (812)
Q Consensus 484 ~~~~~~~~~~~~~~~ 498 (812)
.++++-..+.+.++.
T Consensus 452 s~~lsd~hgql~i~g 466 (1113)
T KOG0644|consen 452 SIALSDDHGQLYILG 466 (1113)
T ss_pred eEecCCCCCceEEec
Confidence 555555555555543
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.9e-18 Score=181.24 Aligned_cols=272 Identities=21% Similarity=0.320 Sum_probs=198.1
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc--ccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT--KSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~v~~l 372 (812)
+.+.||++..... ..........|.++.|+|..+++++.|+.+|.|.+||++.... ...+......|..+++.+
T Consensus 222 ~~~~vW~~~~p~~----Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~v 297 (555)
T KOG1587|consen 222 GVLLVWSLKNPNT----PELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAV 297 (555)
T ss_pred ceEEEEecCCCCC----ceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEE
Confidence 4799999988742 2223335678999999999999999999999999999997655 344444556799999999
Q ss_pred EEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceEEcc---------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 373 SWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFK---------HHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 373 ~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.|..+.. -|++++.||.|..|+++............ .-...+++++|.|..+..|+.|+.+|.|.-=+.
T Consensus 298 vW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r 377 (555)
T KOG1587|consen 298 VWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCR 377 (555)
T ss_pred EEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEec
Confidence 9987654 49999999999999998644322221111 112346666676666666666666665543221
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEE
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELH 521 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 521 (812)
..... .. . +.
T Consensus 378 ~g~~~-----------------------------------------------------------~~----------~-~~ 387 (555)
T KOG1587|consen 378 KGYTP-----------------------------------------------------------AP----------E-VS 387 (555)
T ss_pred cCCcc-----------------------------------------------------------cc----------c-cc
Confidence 11100 00 0 00
Q ss_pred EcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCe
Q psy4510 522 WHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGST 601 (812)
Q Consensus 522 ~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~ 601 (812)
.........|.+.|+.+.++|.+..
T Consensus 388 -------------------------------------------------------~~~~~~~~~h~g~v~~v~~nPF~~k 412 (555)
T KOG1587|consen 388 -------------------------------------------------------YKGHSTFITHIGPVYAVSRNPFYPK 412 (555)
T ss_pred -------------------------------------------------------ccccccccccCcceEeeecCCCccc
Confidence 0012234567779999999999988
Q ss_pred EEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceE
Q psy4510 602 TLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 681 (812)
Q Consensus 602 l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v 681 (812)
++..+ .|.+|+||...... .|+..+..+...|++++|||..+.+|+++..||.|
T Consensus 413 ~fls~--gDW~vriWs~~~~~------------------------~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l 466 (555)
T KOG1587|consen 413 NFLSV--GDWTVRIWSEDVIA------------------------SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNL 466 (555)
T ss_pred eeeee--ccceeEeccccCCC------------------------CcchhhhhccceeeeeEEcCcCceEEEEEcCCCce
Confidence 77764 39999999988322 16777888888999999999888999999999999
Q ss_pred EEEecCC------------CceeEEEEecCCCCEEEeecCCCeEEEeecCCC
Q psy4510 682 HIWTPRE------------AGAWSVYLYTNRFGVLATGDCKRNIHIWTPREA 721 (812)
Q Consensus 682 ~iWd~~~------------~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~ 721 (812)
-|||+.. ..+....++++.|+.|++|+..|++++|++...
T Consensus 467 ~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 467 DIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred ehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 9999975 234556678999999999999999999998643
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.2e-19 Score=165.86 Aligned_cols=198 Identities=17% Similarity=0.302 Sum_probs=160.7
Q ss_pred CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC-CCCEEEEEeCCCcEEEEeCCCCCcceecccc
Q psy4510 236 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKP 314 (812)
Q Consensus 236 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 314 (812)
..+|++...|.|++||..++ ..+..+++|...+..++|... ++..+.+|+.||+|++||++..... ....
T Consensus 41 ~~vav~lSngsv~lyd~~tg-------~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~--a~~~ 111 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTG-------QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAES--ARIS 111 (376)
T ss_pred eeEEEEecCCeEEEEeccch-------hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhh--hhee
Confidence 46788889999999999986 788899999999999999875 6688999999999999999987642 2334
Q ss_pred ccCCC-CCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCC
Q psy4510 315 LVGHT-NSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDG 388 (812)
Q Consensus 315 ~~~h~-~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg 388 (812)
+..+. .+..+++-+-.++ ++++|.. +-.|.+||+|..++ .+..+...|...|+++.|+|..+ +|++|+.||
T Consensus 112 ~~~~~~~~f~~ld~nck~~-ii~~GtE~~~s~A~v~lwDvR~~qq--~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDG 188 (376)
T KOG1188|consen 112 WTQQSGTPFICLDLNCKKN-IIACGTELTRSDASVVLWDVRSEQQ--LLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDG 188 (376)
T ss_pred ccCCCCCcceEeeccCcCC-eEEeccccccCceEEEEEEeccccc--hhhhhhhhccCcceeEEecCCCCCeEEeecccc
Confidence 45555 4666777665665 6777753 67899999996433 36666689999999999999886 999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|.|||+........+...-.|...|.++.|+..+-..|.+-+...+..+|++..+.
T Consensus 189 LvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 189 LVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred eEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 999999986544455666666888999999998764578888899999999998875
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-18 Score=181.93 Aligned_cols=262 Identities=18% Similarity=0.282 Sum_probs=200.5
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCCCCc--EEEeeCCCceEEe
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDLKTA--LQTVDDPFQLAEH 250 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~~~~--l~s~~~d~~i~vw 250 (812)
....|+|+.|+|.++++||.|..+|.|.+||+..+.. ..........|..+|+++.|..+..- +++++.||.|..|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 4578999999999999999999999999999998775 33344455679999999999776555 9999999999999
Q ss_pred eCCCCCCCCCCCCCceEEc------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce----eccccccCCCC
Q psy4510 251 NKKRGKGPGIPTPPLFSFS------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ----VDQKPLVGHTN 320 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~----~~~~~~~~h~~ 320 (812)
+++.-..+... .+..... .-...+++++|.+..+..++.|+..|.|.--......... .....+..|.+
T Consensus 321 ~~~~l~~P~e~-~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g 399 (555)
T KOG1587|consen 321 DTDMLSLPVEG-LLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIG 399 (555)
T ss_pred eccccccchhh-cccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCc
Confidence 88764321110 1111111 1234689999999998999999999998874433222111 12345667899
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~ 399 (812)
+|+++.++|-+..+|.+++ |-+|+||.... ...++..+ ..+...|++++|+|... .|+++..+|.|.+||+...
T Consensus 400 ~v~~v~~nPF~~k~fls~g-DW~vriWs~~~--~~~Pl~~~-~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~- 474 (555)
T KOG1587|consen 400 PVYAVSRNPFYPKNFLSVG-DWTVRIWSEDV--IASPLLSL-DSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD- 474 (555)
T ss_pred ceEeeecCCCccceeeeec-cceeEeccccC--CCCcchhh-hhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc-
Confidence 9999999999997777777 99999999763 22334444 56667799999999887 8999999999999999863
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
...++.+.+.+....+.+.|++.+ .+|++|...|++.+|++..
T Consensus 475 ~~~Pv~s~~~~~~~l~~~~~s~~g-~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 475 DEEPVLSQKVCSPALTRVRWSPNG-KLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ccCCcccccccccccceeecCCCC-cEEEEecCCCcEEEEEcCc
Confidence 345677766667777888888876 6999999999999999964
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-18 Score=159.39 Aligned_cols=216 Identities=19% Similarity=0.252 Sum_probs=178.8
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
-..+|+|.||++|+..+|.+.....+.||...... ..++.++++.|...|++++|+|.. +.|++++.|..-+||.
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~----~w~~~htls~Hd~~vtgvdWap~s-nrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD----LWEPAHTLSEHDKIVTGVDWAPKS-NRIVTCSHDRNAYVWT 83 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCC----CceeceehhhhCcceeEEeecCCC-CceeEccCCCCccccc
Confidence 45789999999999999999999999999988752 368899999999999999999998 7999999999999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
...+..|.. ...+..+...++++.|+|.++ .||+|+.-..|.||-....+.-..-+.+...+.+.|++++|+|++-+|
T Consensus 84 ~~~~~~Wkp-tlvLlRiNrAAt~V~WsP~en-kFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLl 161 (361)
T KOG1523|consen 84 QPSGGTWKP-TLVLLRINRAATCVKWSPKEN-KFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLL 161 (361)
T ss_pred cCCCCeecc-ceeEEEeccceeeEeecCcCc-eEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCccee
Confidence 977766654 445666899999999999998 599999999999998876554433344556778899999999999999
Q ss_pred EEEeCCCcEEEEecCC---------------CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 382 VSGGDDGCIHVWDLRR---------------FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~---------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++|+.|+..+||..-- +.-++.+..+....+.|..+.|+|.| ..|+-.+.|..+.+-|.....
T Consensus 162 aaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG-~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSG-NRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCC-CEeeEecCCCceEEeecCCCc
Confidence 9999999999986521 00112233344567889999999998 589999999999999987763
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=180.83 Aligned_cols=261 Identities=15% Similarity=0.189 Sum_probs=195.0
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC----CCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE----AGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~----~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.+.-|.+.|++++|.| ....|++|+.||++.+|+++. ......+..++.+|.++|.|+++++.+.++.+|+.||+
T Consensus 289 tl~s~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~ 367 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGT 367 (577)
T ss_pred eeecchhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCce
Confidence 4447889999999999 999999999999999999943 22334467789999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCC---CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC--CCCC
Q psy4510 247 LAEHNKKRGKGPGI---PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG--HTNS 321 (812)
Q Consensus 247 i~vwd~~~~~~~~~---~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~--h~~~ 321 (812)
|+.|++.....+-- +......+.||.+.++.+++|+.. ..|++++.||++++|+...... ..+.. -.+.
T Consensus 368 I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~-~~Llscs~DgTvr~w~~~~~~~-----~~f~~~~e~g~ 441 (577)
T KOG0642|consen 368 IRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTK-DRLLSCSSDGTVRLWEPTEESP-----CTFGEPKEHGY 441 (577)
T ss_pred eeeeccCCCCCcccccCcchhccceeccccceeeeeecccc-cceeeecCCceEEeeccCCcCc-----cccCCccccCC
Confidence 99997653211110 123445788999999999999987 7899999999999999887652 22221 2233
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
-..+.+......+.++. ...+.+++........+..+.. .....++-+.++|.+.+.+++..|+.|+++|.
T Consensus 442 Plsvd~~ss~~a~~~~s---~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn 518 (577)
T KOG0642|consen 442 PLSVDRTSSRPAHSLAS---FRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDN 518 (577)
T ss_pred cceEeeccchhHhhhhh---cccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccc
Confidence 44555544432122222 2333333322222222222211 11245788999999999999999999999999
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
. .+.+++....|...++++++.|++. +|++++.|+.+++|.+....
T Consensus 519 ~---~~~~l~s~~a~~~svtslai~~ng~-~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 519 K---TGKILHSMVAHKDSVTSLAIDPNGP-YLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred c---ccccchheeeccceecceeecCCCc-eEEeecCCceeehhhccchh
Confidence 8 6889999999999999999999985 99999999999999997663
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-19 Score=160.64 Aligned_cols=304 Identities=15% Similarity=0.212 Sum_probs=196.3
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEE
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCS 339 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~ 339 (812)
+..|.+.+++|.+.++++.|-.++ +|.+|...|.|++|++.+.. ....+. .|...|+.++-.|++. +.+-+
T Consensus 3 pPdP~fvLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r----~~~~~r~~g~~~it~lq~~p~d~--l~tqg 74 (323)
T KOG0322|consen 3 PPDPFFVLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTER----DLPLIRLFGRLFITNLQSIPNDS--LDTQG 74 (323)
T ss_pred CCCCeeEeccccchheehhhccch--hhhcccccceEEEEEeecCc----cchhhhhhccceeeceeecCCcc--hhhcC
Confidence 457899999999999999998875 69999999999999999887 444555 5677999999999865 88999
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCC------CCC--ceEEc---
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFK------KGS--SVATF--- 407 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~------~~~--~~~~~--- 407 (812)
.|+.+.+|++.... .. ..|+-.++++-|++.. +..++... .+-.++-|... .+. .+...
T Consensus 75 Rd~~L~lw~ia~s~----~i---~i~Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~ 145 (323)
T KOG0322|consen 75 RDPLLILWTIAYSA----FI---SIHSIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDS 145 (323)
T ss_pred CCceEEEEEccCcc----eE---EEeeeeccccccccce--eccCCCcchhheecCCcccchhhhhccCccceeEccCch
Confidence 99999999997321 11 3355566777666532 11111111 11122211100 011 11111
Q ss_pred -ccCCCCEEEEEEccC-CCc-EEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 408 -KHHTAPVTTVEWHPT-ESS-TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 408 -~~h~~~v~~v~~~p~-~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
.+..+.+++..|.-. +.+ +|++|-.+|.|.+||++.+...- .....-+-......+..+|.++.+.+....
T Consensus 146 ~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~------~~~~~~kv~~~~ash~qpvlsldyas~~~r 219 (323)
T KOG0322|consen 146 ERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKII------QLPQSSKVESPNASHKQPVLSLDYASSCDR 219 (323)
T ss_pred hccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceee------ccccccccccchhhccCcceeeeechhhcC
Confidence 123456777765432 233 45666779999999999873210 000000112222333456777777765444
Q ss_pred EEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccccc
Q psy4510 485 TIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDE 564 (812)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 564 (812)
-+..+..+.+..|..... ..
T Consensus 220 Gisgga~dkl~~~Sl~~s---------------------~g--------------------------------------- 239 (323)
T KOG0322|consen 220 GISGGADDKLVMYSLNHS---------------------TG--------------------------------------- 239 (323)
T ss_pred CcCCCccccceeeeeccc---------------------cC---------------------------------------
Confidence 344444433333321110 00
Q ss_pred CCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCC
Q psy4510 565 SEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGI 644 (812)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (812)
.........-.+-.|..+..-||++.++++ +.||+||||..++..
T Consensus 240 -----------slq~~~e~~lknpGv~gvrIRpD~KIlATA--GWD~RiRVyswrtl~---------------------- 284 (323)
T KOG0322|consen 240 -----------SLQIRKEITLKNPGVSGVRIRPDGKILATA--GWDHRIRVYSWRTLN---------------------- 284 (323)
T ss_pred -----------cccccceEEecCCCccceEEccCCcEEeec--ccCCcEEEEEeccCC----------------------
Confidence 000011111222367788899999999999 999999999999987
Q ss_pred CCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 645 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 645 ~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
++..++-|++.|.+++|+| +..++|+||.|++|.+|++
T Consensus 285 ---pLAVLkyHsagvn~vAfsp-d~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 285 ---PLAVLKYHSAGVNAVAFSP-DCELMAAASKDARISLWKL 322 (323)
T ss_pred ---chhhhhhhhcceeEEEeCC-CCchhhhccCCceEEeeec
Confidence 8899999999999999999 7779999999999999986
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.3e-18 Score=161.16 Aligned_cols=312 Identities=13% Similarity=0.142 Sum_probs=214.8
Q ss_pred CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc---ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~---~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
.+|.+.|.++.||. ++++||+||.|..+++|++...-. ++.....-..|...|.|++|.-..+.|.+|..++++..
T Consensus 53 ~~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~ 131 (609)
T KOG4227|consen 53 REHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIK 131 (609)
T ss_pred hhhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEe
Confidence 38999999999999 999999999999999999875321 11122223356689999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
.|+.+. +.+..+. ...+.|+.+..+|.. +.|++.+.++.|.+||++...... ....+.........+.|
T Consensus 132 HDiEt~-------qsi~V~~~~~~~~~VY~m~~~P~D-N~~~~~t~~~~V~~~D~Rd~~~~~-~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 132 HDIETK-------QSIYVANENNNRGDVYHMDQHPTD-NTLIVVTRAKLVSFIDNRDRQNPI-SLVLPANSGKNFYTAEF 202 (609)
T ss_pred eecccc-------eeeeeecccCcccceeecccCCCC-ceEEEEecCceEEEEeccCCCCCC-ceeeecCCCccceeeee
Confidence 999984 4444443 223589999999997 899999999999999998765211 11122234457788999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC---CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH---TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
+|..+.+|++.+..+-+.+||+|.............+- ...-.++.|+|+|+.|++--....-.+||+-. ...++
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S--~R~~V 280 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFIS--QRCFV 280 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeec--cccee
Confidence 99999999999999999999999644322111111111 22236788999999888776666677888863 23334
Q ss_pred EEcccC------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhH-HHhhhhhccCC------CceEEeecCCC
Q psy4510 405 ATFKHH------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI-EQREAELKDLP------SQLLFIHLGQK 471 (812)
Q Consensus 405 ~~~~~h------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~ 471 (812)
..+... ...+.+++|..+ ..+++|+.+-.|.+|.+......-. .+........| ..+.....+..
T Consensus 281 ~k~D~N~~GY~N~~T~KS~~F~~D--~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRS 358 (609)
T KOG4227|consen 281 LKSDHNPNGYCNIKTIKSMTFIDD--YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRS 358 (609)
T ss_pred EeccCCCCcceeeeeeeeeeeecc--eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccc
Confidence 444311 234778888865 5699999999999999876533211 01111111222 23344445555
Q ss_pred ceeEEEEcCCCCCEEEEEe-CCCeEEEEe
Q psy4510 472 EIKELHWHPQLPGTIISTA-NSGFNIFRT 499 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~-~~~~~~~~~ 499 (812)
-+..+.|+|... ++++.+ ...+.+|..
T Consensus 359 v~NQVRF~~H~~-~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 359 VPNQVRFSQHNN-LLVSSGVENSFKLWSD 386 (609)
T ss_pred cccceeecCCcc-eEeccchhhheecccc
Confidence 689999999864 455444 444555543
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-18 Score=157.75 Aligned_cols=253 Identities=17% Similarity=0.271 Sum_probs=205.4
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
..+|+|.+|++ ++..+|++.....|.||.......+. ...++..|...|+++.|+|.++.|++|+.|..-.||....+
T Consensus 10 ~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~-~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~ 87 (361)
T KOG1523|consen 10 LEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWE-PAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSG 87 (361)
T ss_pred cCceeeeeecC-CCceEEeccCCceEEEEEecCCCCce-eceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCC
Confidence 47899999999 99999999999999999887765333 67889999999999999999999999999999999998433
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
. ..+|...+..+.....++.|+|.+ +.+|+|+..+.|.||-.+....|-+....-+.+.+.|+++.|+|++- +|
T Consensus 88 ~----~WkptlvLlRiNrAAt~V~WsP~e-nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnV-Ll 161 (361)
T KOG1523|consen 88 G----TWKPTLVLLRINRAATCVKWSPKE-NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNV-LL 161 (361)
T ss_pred C----eeccceeEEEeccceeeEeecCcC-ceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcc-ee
Confidence 2 578888888999999999999998 89999999999999999998888777777777899999999999998 79
Q ss_pred EEEECCCeEEEEECC-----CCCc----------ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q psy4510 336 ASCSVDLSIRIWDTR-----VINT----------KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~-----~~~~----------~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
++|+.|+..|++..- .... +..+..+ ....+.|..+.|+|.|+.|+-.+.|..+.+-|... .
T Consensus 162 aaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~-~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~--p 238 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEA-SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAG--P 238 (361)
T ss_pred cccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhh-ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCC--C
Confidence 999999999998642 1110 0111122 24567899999999999999999999999999875 2
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.+.+.....-.-+..++.|-.. ..++.++.|..-.++..
T Consensus 239 ~~~v~~~~~~~lP~ls~~~ise--~~vv~ag~~c~P~lf~~ 277 (361)
T KOG1523|consen 239 SERVQSVATAQLPLLSVSWISE--NSVVAAGYDCGPVLFVT 277 (361)
T ss_pred chhccchhhccCCceeeEeecC--CceeecCCCCCceEEEe
Confidence 2244444444578888888765 35777777754444433
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=170.74 Aligned_cols=224 Identities=21% Similarity=0.307 Sum_probs=168.3
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE-EcCCCCcEEEEEecCCC-CCEEEEEe
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFAMDWSSTE-PGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~sp~~-~~~l~sg~ 292 (812)
..+.|.||++.|.|++|+.+|.+|++|+.|..+.|||.-.. ++++. -.||...|+++.|-|.. ..++++|.
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~-------KllhsI~TgHtaNIFsvKFvP~tnnriv~sgA 114 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEY-------KLLHSISTGHTANIFSVKFVPYTNNRIVLSGA 114 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhc-------ceeeeeecccccceeEEeeeccCCCeEEEecc
Confidence 45678999999999999999999999999999999998863 55554 46899999999999964 35789999
Q ss_pred CCCcEEEEeCCCCCc------ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce----eecC
Q psy4510 293 CKRNIHIWTPREAGA------WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM----LTLP 362 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~ 362 (812)
.|..|+++|+...+. .......+..|...|..|+-.|++++.|.+++.||+|+-+|+|....-..- ..+.
T Consensus 115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ 194 (758)
T KOG1310|consen 115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILV 194 (758)
T ss_pred CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHH
Confidence 999999999985321 122345667799999999999999889999999999999999963221111 1110
Q ss_pred --CcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCC---------------CceEEc-ccCC-----------C
Q psy4510 363 --NAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKG---------------SSVATF-KHHT-----------A 412 (812)
Q Consensus 363 --~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~---------------~~~~~~-~~h~-----------~ 412 (812)
...--...|+..+|..+ +|++|+.|-..++||.|...+. .++..| .+|. .
T Consensus 195 ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~ 274 (758)
T KOG1310|consen 195 NYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYIT 274 (758)
T ss_pred HhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccccccccee
Confidence 11123467899999886 9999999999999996532110 012222 1221 1
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
.++-+.|+|+|..+|++-+.+ .|.++|+...+.
T Consensus 275 ~~t~vtfnpNGtElLvs~~gE-hVYlfdvn~~~~ 307 (758)
T KOG1310|consen 275 CCTYVTFNPNGTELLVSWGGE-HVYLFDVNEDKS 307 (758)
T ss_pred eeEEEEECCCCcEEEEeeCCe-EEEEEeecCCCC
Confidence 256788999987788877765 699999987754
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=156.81 Aligned_cols=220 Identities=15% Similarity=0.273 Sum_probs=147.4
Q ss_pred eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
-..|||+|+++|+++.- .+.|-|..+- + +..+..--+.|.-+.|..+....|.....++.|.+|++....
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tl-------q-~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe- 82 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETL-------Q-LHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPE- 82 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchh-------h-HHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecce-
Confidence 46799999999999876 5666666552 2 222222246788899999886667777889999999998775
Q ss_pred ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 308 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
-...+......+..++|+|+|+++|.+...+-.|.+|.+.+ .++.. + .-....+..++|+|+|++.+..++-
T Consensus 83 ---w~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t---~~~~~-~-~~pK~~~kg~~f~~dg~f~ai~sRr 154 (447)
T KOG4497|consen 83 ---WYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNT---QKGYL-L-PHPKTNVKGYAFHPDGQFCAILSRR 154 (447)
T ss_pred ---eEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecc---ceeEE-e-cccccCceeEEECCCCceeeeeecc
Confidence 34445556778999999999999999999999999999984 22222 2 2234456899999999988887754
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (812)
.....+.+...+....+..+.-.+-..+.+.|+|+| ..|+ +||--.. ......
T Consensus 155 DCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg-~~la---------Vwd~~Le-----------------ykv~aY 207 (447)
T KOG4497|consen 155 DCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDG-NWLA---------VWDNVLE-----------------YKVYAY 207 (447)
T ss_pred cHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCC-cEEE---------Eecchhh-----------------heeeee
Confidence 222222221111223455566666778999999997 3544 5654333 111122
Q ss_pred cCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 468 LGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 468 ~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
...-.+..++|+|.+. +++.++.|+
T Consensus 208 e~~lG~k~v~wsP~~q-flavGsyD~ 232 (447)
T KOG4497|consen 208 ERGLGLKFVEWSPCNQ-FLAVGSYDQ 232 (447)
T ss_pred eeccceeEEEeccccc-eEEeeccch
Confidence 2224688999999764 455555554
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.3e-19 Score=174.84 Aligned_cols=332 Identities=18% Similarity=0.216 Sum_probs=235.3
Q ss_pred ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC--CEEEEEeCCC
Q psy4510 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE--PLIVSGGDDG 388 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~sg~~dg 388 (812)
....+..|.+.|+.+.|+..|. +|++|+.|..|.+||.. .......+..+|...|....|-|.. +-+++++.||
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd-~l~SgSDD~~vv~WdW~---~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dg 209 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGD-VLASGSDDLQVVVWDWV---SGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDG 209 (559)
T ss_pred hhhcccCCCCccceeeecccCc-eeeccCccceEEeehhh---ccCcccccccccccchhhhhccCCCCCcCceeccccC
Confidence 3566788999999999999999 79999999999999998 4455677778999999888899865 4899999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
.+++=.+...+.......+..|.++|..++.-|..+..|.+++.|+.+.-.|++..... ..+....
T Consensus 210 qvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa--------------~~~~cr~ 275 (559)
T KOG1334|consen 210 QVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPA--------------EKFVCRE 275 (559)
T ss_pred ceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCcc--------------ceeeeec
Confidence 99998876533333356677899999999999999999999999999999999877432 2222111
Q ss_pred -CCC---ceeEEEEcCCCCCEEEEEeCCCe-EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEE
Q psy4510 469 -GQK---EIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543 (812)
Q Consensus 469 -~~~---~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~ 543 (812)
... ....++.+|..++.+++++.+.+ .+|+........ ..+.+. .|.|.
T Consensus 276 ~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~------~n~~~~--~f~p~------------------ 329 (559)
T KOG1334|consen 276 ADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEE------NNGVLD--KFCPH------------------ 329 (559)
T ss_pred cCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhcc------ccchhh--hcCCc------------------
Confidence 122 46788999998888888887765 344322211000 000000 11111
Q ss_pred eecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccccc
Q psy4510 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQ 623 (812)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~ 623 (812)
.......-.|++++|+.++.-|+++ -.|-.|+++.-.-+.-
T Consensus 330 -------------------------------------hl~~d~~v~ITgl~Ysh~~sElLaS--YnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 330 -------------------------------------HLVEDDPVNITGLVYSHDGSELLAS--YNDEDIYLFNKSMGDG 370 (559)
T ss_pred -------------------------------------cccccCcccceeEEecCCccceeee--ecccceEEeccccccC
Confidence 0001223479999999888877776 5788899984433321
Q ss_pred ccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCE
Q psy4510 624 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV 703 (812)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~ 703 (812)
. .|...... .....+.++||.+.- .+-.+-||.|...|
T Consensus 371 ~--~p~~~s~~----------~~~~k~vYKGHrN~~------------------------------TVKgVNFfGPrsEy 408 (559)
T KOG1334|consen 371 S--EPDPSSPR----------EQYVKRVYKGHRNSR------------------------------TVKGVNFFGPRSEY 408 (559)
T ss_pred C--CCCCCcch----------hhccchhhccccccc------------------------------ccceeeeccCccce
Confidence 1 11110000 011223377776421 12234467788899
Q ss_pred EEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEE
Q psy4510 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCF 772 (812)
Q Consensus 704 lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~ 772 (812)
+++||..|.|.||+-.+++ +++.+.|....|+||.=+|--. +|||+|.|.-|+||......+.+
T Consensus 409 VvSGSDCGhIFiW~K~t~e----ii~~MegDr~VVNCLEpHP~~P-vLAsSGid~DVKIWTP~~~er~~ 472 (559)
T KOG1334|consen 409 VVSGSDCGHIFIWDKKTGE----IIRFMEGDRHVVNCLEPHPHLP-VLASSGIDHDVKIWTPLTAERAT 472 (559)
T ss_pred EEecCccceEEEEecchhH----HHHHhhcccceEeccCCCCCCc-hhhccCCccceeeecCCcccccc
Confidence 9999999999999998887 5778888888999999999999 99999999999999986665433
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=160.81 Aligned_cols=237 Identities=21% Similarity=0.359 Sum_probs=174.2
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce---eccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ---VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.-.+.||+++|..++|+|-+...||||+.|.+|.||.+..+.... .....+.+|...|--++|+|.-.++|++++.|
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence 345789999999999999888899999999999999998765321 23556789999999999999999999999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC-EEEEEEc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP-VTTVEWH 420 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~-v~~v~~~ 420 (812)
.+|.+|++.+ +..+.++ .|..-|.+++|+.+|.+|++.+.|..|+|||.| .+..+..-.+|.+. -..+-|-
T Consensus 154 n~v~iWnv~t---geali~l--~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr---~~~~v~e~~~heG~k~~Raifl 225 (472)
T KOG0303|consen 154 NTVSIWNVGT---GEALITL--DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR---RGTVVSEGVAHEGAKPARAIFL 225 (472)
T ss_pred ceEEEEeccC---Cceeeec--CCCCeEEEEEeccCCceeeeecccceeEEEcCC---CCcEeeecccccCCCcceeEEe
Confidence 9999999994 4456666 399999999999999999999999999999999 57778877778653 3456677
Q ss_pred cCCCcEEEEEE---CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee-cCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 421 PTESSTFASGG---ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH-LGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 421 p~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
.++. ++.+|- .+.++-+||-..... .+.+.. .....|.---|.++...+.+.+-.|+...
T Consensus 226 ~~g~-i~tTGfsr~seRq~aLwdp~nl~e---------------P~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IR 289 (472)
T KOG0303|consen 226 ASGK-IFTTGFSRMSERQIALWDPNNLEE---------------PIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIR 289 (472)
T ss_pred ccCc-eeeeccccccccceeccCcccccC---------------cceeEEeccCCceEEeeecCCCCEEEEEecCCcceE
Confidence 7763 444442 367899999877643 122222 22334555556777665666665666555
Q ss_pred EEeCCCCCcccEE--eecCCCCeeEEEEcCC
Q psy4510 497 FRTISDLPSQLLF--IHLGQKEIKELHWHPQ 525 (812)
Q Consensus 497 ~~~~~~~~~~~~~--~~~~~~~i~~~~~~p~ 525 (812)
|..++...+.+-+ ......+-..+.+.|.
T Consensus 290 YyEit~d~P~~hyln~f~S~epQRG~g~mPK 320 (472)
T KOG0303|consen 290 YFEITNEPPFVHYLNTFSSKEPQRGMGFMPK 320 (472)
T ss_pred EEEecCCCceeEEecccccCCcccccccccc
Confidence 5555544433222 2223345555666665
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.7e-17 Score=174.98 Aligned_cols=225 Identities=17% Similarity=0.174 Sum_probs=163.3
Q ss_pred cccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC 293 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~ 293 (812)
.+..+..|...|..++.++.. .++++|+.||+|++|+...-...+...+...++....+.+.++.+.+.+ ..+|.|+.
T Consensus 1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~-~~~Av~t~ 1118 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG-DQFAVSTK 1118 (1431)
T ss_pred EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC-CeEEEEcC
Confidence 566788899999999887766 9999999999999999887533323344555555567889999999998 78999999
Q ss_pred CCcEEEEeCCCCCc-ce----eccccccCCCCCEEEEEEcCCCCe-EEEEEECCCeEEEEECCCCCcccceeecCCcCCC
Q psy4510 294 KRNIHIWTPREAGA-WQ----VDQKPLVGHTNSVEDLQWSPGEKR-VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367 (812)
Q Consensus 294 dg~i~vwd~~~~~~-~~----~~~~~~~~h~~~v~~~~~~p~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 367 (812)
||.|++.++..... .. ............|..-+|....+. +++.+...+.|..||+++......+. . ....+
T Consensus 1119 DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk-~-~~~hG 1196 (1431)
T KOG1240|consen 1119 DGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK-N-QLRHG 1196 (1431)
T ss_pred CCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh-c-Ccccc
Confidence 99999999987321 01 111222222334444455544444 78889999999999999644332222 2 23457
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCC--cEEEEEE--CCCCEEEEEcC
Q psy4510 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTES--STFASGG--ADDQIALWDLA 442 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~--~~l~s~~--~dg~v~iwd~~ 442 (812)
.|++++.+|.++++++|+..|.+.+||+| -+.++.... .+..+|+.+..+|..+ ...++++ ..+.|.+|++.
T Consensus 1197 ~vTSi~idp~~~WlviGts~G~l~lWDLR---F~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1197 LVTSIVIDPWCNWLVIGTSRGQLVLWDLR---FRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred ceeEEEecCCceEEEEecCCceEEEEEee---cCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 89999999999999999999999999999 455665543 3457888888887644 4555554 47789999998
Q ss_pred CCC
Q psy4510 443 VER 445 (812)
Q Consensus 443 ~~~ 445 (812)
++.
T Consensus 1274 ~g~ 1276 (1431)
T KOG1240|consen 1274 TGL 1276 (1431)
T ss_pred cCc
Confidence 873
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=181.13 Aligned_cols=274 Identities=23% Similarity=0.314 Sum_probs=205.8
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
.+.|.+|..+|+|+.|...|.++++|+.|..++||.+.++ .++.+.+||.+.|+.++.+... .+++++++|.
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~-------~~lAs~rGhs~ditdlavs~~n-~~iaaaS~D~ 254 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETA-------RCLASCRGHSGDITDLAVSSNN-TMIAAASNDK 254 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccch-------hhhccCCCCccccchhccchhh-hhhhhcccCc
Confidence 4568899999999999999999999999999999998885 8999999999999999999987 7899999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
.|++|.+..+. ++..+.+|++.|++|+|+|- ++.+.||++++||.+-................-+.++.|.
T Consensus 255 vIrvWrl~~~~----pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~ 325 (1113)
T KOG0644|consen 255 VIRVWRLPDGA----PVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFE 325 (1113)
T ss_pred eEEEEecCCCc----hHHHHhccccceeeeccCcc-----ccCCCCCceEeccccccccccCCCCCCcccccceeeeecc
Confidence 99999999988 78889999999999999994 4788999999999982211111111212334567888888
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
.++..++||+.|+.-..|.+.... .+...+.-+.++.+-..+.+++-.+..+++|++..+.
T Consensus 326 ~~~~~f~Tgs~d~ea~n~e~~~l~---------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~---------- 386 (1113)
T KOG0644|consen 326 NNGDRFLTGSRDGEARNHEFEQLA---------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQ---------- 386 (1113)
T ss_pred ccccccccccCCcccccchhhHhh---------hhccceEEEeccccccccceeeeeeeEeeeeecccch----------
Confidence 888999999999998888775311 1222222222222333567777778899999999883
Q ss_pred hccCCCceEEeecCC-CceeEEEEcCCCCCEEEEEeCCCeEEEEeCC-CCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 456 LKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIISTANSGFNIFRTIS-DLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
+.-...++ ..+..+.+||-.+.+..+.+.+|..+.|.+. +.+.+..+ .++..+..-.|+++ |.-++.
T Consensus 387 -------l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~--~gh~kl~d~kFSqd--gts~~l 455 (1113)
T KOG0644|consen 387 -------LLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF--IGHGKLVDGKFSQD--GTSIAL 455 (1113)
T ss_pred -------hhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee--cccceeeccccCCC--CceEec
Confidence 22222333 3688899999999999998888865555544 44444444 33677777888888 444444
Q ss_pred eCC
Q psy4510 534 ANS 536 (812)
Q Consensus 534 ~~~ 536 (812)
.++
T Consensus 456 sd~ 458 (1113)
T KOG0644|consen 456 SDD 458 (1113)
T ss_pred CCC
Confidence 433
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.6e-17 Score=160.57 Aligned_cols=209 Identities=13% Similarity=0.189 Sum_probs=163.5
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
...++.++.||.+.|-+-... ..+...+|.+.|.|-.|+|+|.-|++++.||.|++|.-.. -...++
T Consensus 75 ~d~~~i~s~DGkf~il~k~~r-----VE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG--------MLRStl 141 (737)
T KOG1524|consen 75 SDTLLICSNDGRFVILNKSAR-----VERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG--------MLRSTV 141 (737)
T ss_pred cceEEEEcCCceEEEecccch-----hhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc--------hHHHHH
Confidence 356777888999999854332 4466789999999999999999999999999999998654 333344
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
......|+|++|.|+....+.+.+ +.+.|=-+.... .....+.|.+-|.++.|++... ++++|+.|-..++||
T Consensus 142 ~Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~----k~i~WkAHDGiiL~~~W~~~s~-lI~sgGED~kfKvWD 214 (737)
T KOG1524|consen 142 VQNEESIRCARWAPNSNSIVFCQG--GHISIKPLAANS----KIIRWRAHDGLVLSLSWSTQSN-IIASGGEDFRFKIWD 214 (737)
T ss_pred hhcCceeEEEEECCCCCceEEecC--CeEEEeeccccc----ceeEEeccCcEEEEeecCcccc-ceeecCCceeEEeec
Confidence 455678999999999977777765 566665555444 4566889999999999999998 899999999999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
.. +..+..- ..|..+|++++|+|+ ..++.|+.. +++ + -+...+.|..++|+|+| ..++
T Consensus 215 ~~----G~~Lf~S-~~~ey~ITSva~npd-~~~~v~S~n-t~R---~-----------~~p~~GSifnlsWS~DG-TQ~a 272 (737)
T KOG1524|consen 215 AQ----GANLFTS-AAEEYAITSVAFNPE-KDYLLWSYN-TAR---F-----------SSPRVGSIFNLSWSADG-TQAT 272 (737)
T ss_pred cc----CcccccC-Chhccceeeeeeccc-cceeeeeee-eee---e-----------cCCCccceEEEEEcCCC-ceee
Confidence 75 4445554 789999999999999 677766643 333 1 12346789999999998 6888
Q ss_pred EEECCCCEEEE
Q psy4510 429 SGGADDQIALW 439 (812)
Q Consensus 429 s~~~dg~v~iw 439 (812)
.|...|.+.+=
T Consensus 273 ~gt~~G~v~~A 283 (737)
T KOG1524|consen 273 CGTSTGQLIVA 283 (737)
T ss_pred ccccCceEEEe
Confidence 88888877653
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=170.63 Aligned_cols=298 Identities=20% Similarity=0.250 Sum_probs=203.7
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCC---CCCeeeeeEcC--CCCcEEEeeCCCceEEee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH---TNSAEDLQWSD--LKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h---~~~V~~l~~s~--~~~~l~s~~~d~~i~vwd 251 (812)
..-..+.|+| -...++++...-.|+|||.+.++ ....+..+ ...|+.+.+-. |..+|++|+.||.|+||+
T Consensus 1065 ~~pk~~~~hp-f~p~i~~ad~r~~i~vwd~e~~~----~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk 1139 (1387)
T KOG1517|consen 1065 QPPKTLKFHP-FEPQIAAADDRERIRVWDWEKGR----LLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWK 1139 (1387)
T ss_pred CCCceeeecC-CCceeEEcCCcceEEEEecccCc----eeccccCCCCCCCccceeeeecccchhheeeeccCceEEEec
Confidence 3466788999 77888888867799999998876 33333332 35688888854 446899999999999997
Q ss_pred CCCCCCCCCCCCCceEEc-------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 252 KKRGKGPGIPTPPLFSFS-------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
--... +.+.+.+..+. +-.+...-++|..+. +.|++++.-..|+|||...... ......+....|++
T Consensus 1140 ~y~~~--~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~-G~Ll~tGd~r~IRIWDa~~E~~---~~diP~~s~t~vTa 1213 (1387)
T KOG1517|consen 1140 DYADK--WKKPELVTAWSSLSDQLPGARGTGLVVDWQQQS-GHLLVTGDVRSIRIWDAHKEQV---VADIPYGSSTLVTA 1213 (1387)
T ss_pred ccccc--cCCceeEEeeccccccCccCCCCCeeeehhhhC-CeEEecCCeeEEEEEeccccee---EeecccCCCcccee
Confidence 54321 00122222222 122333567888877 6666666679999999987753 22223345567888
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC--eEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCC
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD--VNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
+.-+-.+.+++++|..||.|++||.|.......+... ..|... |..+.+.+.|- .|++|+.+|.|++||+|.. ..
T Consensus 1214 LS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~-R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~-~~ 1291 (1387)
T KOG1517|consen 1214 LSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVY-REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS-SK 1291 (1387)
T ss_pred ecccccCCceEEEeecCCceEEeecccCCccccceee-cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccC-cc
Confidence 8776655558999999999999999987655444444 778777 99999999885 6999999999999999963 22
Q ss_pred CceEEcccCC--C-CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEE
Q psy4510 402 SSVATFKHHT--A-PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHW 478 (812)
Q Consensus 402 ~~~~~~~~h~--~-~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 478 (812)
....+...|. + ..+++..|++. .++|+|+. +.|+||++...+.. .....-.|..+....+.+++|
T Consensus 1292 e~~~~iv~~~~yGs~lTal~VH~ha-piiAsGs~-q~ikIy~~~G~~l~----------~~k~n~~F~~q~~gs~scL~F 1359 (1387)
T KOG1517|consen 1292 ETFLTIVAHWEYGSALTALTVHEHA-PIIASGSA-QLIKIYSLSGEQLN----------IIKYNPGFMGQRIGSVSCLAF 1359 (1387)
T ss_pred cccceeeeccccCccceeeeeccCC-CeeeecCc-ceEEEEecChhhhc----------ccccCcccccCcCCCcceeee
Confidence 2223333332 3 58999999986 58899888 89999999876432 111123344444557899999
Q ss_pred cCCCCCEEEEEeCCCeEEEEe
Q psy4510 479 HPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 479 ~p~~~~~~~~~~~~~~~~~~~ 499 (812)
||....+.++..+..+.+|..
T Consensus 1360 HP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1360 HPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred cchhHhhhhccCCceEEEeec
Confidence 998644444433333456543
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.5e-16 Score=140.62 Aligned_cols=247 Identities=19% Similarity=0.213 Sum_probs=173.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC------cccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG------AWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw 250 (812)
+.|++-+++| .+++|+.|+.+|+|.+..+.+.. ..+......++|.++|+.++|. ..+|++|+. |.|+-|
T Consensus 11 ~tvf~qa~sp-~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G~V~gw 86 (325)
T KOG0649|consen 11 NTVFAQAISP-SKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD-GLVYGW 86 (325)
T ss_pred HHHHHHhhCC-cceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC-ceEEEe
Confidence 4567788999 99999999999999999877421 1222344568999999999998 456777665 999998
Q ss_pred eCCCCCCCCCCCCCceEE-------cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 251 NKKRGKGPGIPTPPLFSF-------SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
....-... ...+++... ...--+|+++-..|.. +-++.++.|+.++-||++++. ..+.++||++.|.
T Consensus 87 ~W~E~~es-~~~K~lwe~~~P~~~~~~evPeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~----i~r~~rGHtDYvH 160 (325)
T KOG0649|consen 87 EWNEEEES-LATKRLWEVKIPMQVDAVEVPEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGR----IQREYRGHTDYVH 160 (325)
T ss_pred eehhhhhh-ccchhhhhhcCccccCcccCCccceeEeccCC-CcEEEecCCeEEEEEEecCCE----EEEEEcCCcceee
Confidence 76543110 011222111 1123478999999988 444555579999999999998 7889999999999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-----Cc-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-----NA-HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
++.-..... -+++|+.||++|+||+++.+..+.+.... .. -...|.+++-+ ...+++|+ ...+.+|.+|.
T Consensus 161 ~vv~R~~~~-qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhLrs 236 (325)
T KOG0649|consen 161 SVVGRNANG-QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHLRS 236 (325)
T ss_pred eeeecccCc-ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecC-CCceeEEeccC
Confidence 999844444 38999999999999999654322221111 11 23446666654 44777776 45799999994
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+...|. -.+++..+.|..+ .+++++..+.|.-|.+...
T Consensus 237 ---se~t~vfp-ipa~v~~v~F~~d---~vl~~G~g~~v~~~~l~Gv 276 (325)
T KOG0649|consen 237 ---SESTCVFP-IPARVHLVDFVDD---CVLIGGEGNHVQSYTLNGV 276 (325)
T ss_pred ---CCceEEEe-cccceeEeeeecc---eEEEeccccceeeeeeccE
Confidence 44555554 3456777888743 6777887788999988754
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=148.83 Aligned_cols=399 Identities=12% Similarity=0.080 Sum_probs=235.8
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~~~~~~ 260 (812)
+.||| +|+++|+++.- ++.|-|..+-+ +..+...-..|.-+.|..+..+++.+ ..++.|.+|++...
T Consensus 14 c~fSp-~g~yiAs~~~y-rlviRd~~tlq-----~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qp----- 81 (447)
T KOG4497|consen 14 CSFSP-CGNYIASLSRY-RLVIRDSETLQ-----LHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQP----- 81 (447)
T ss_pred eeECC-CCCeeeeeeee-EEEEeccchhh-----HHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecc-----
Confidence 67999 99999999975 78888877654 22233335678889999998877655 57889999999863
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
.-...+.....++.+++|||+|..+|.+...+-.|.||.+.+... .-+......+..++|+|+|+ +.+.++.
T Consensus 82 --ew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~-----~~~~~pK~~~kg~~f~~dg~-f~ai~sR 153 (447)
T KOG4497|consen 82 --EWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKG-----YLLPHPKTNVKGYAFHPDGQ-FCAILSR 153 (447)
T ss_pred --eeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecccee-----EEecccccCceeEEECCCCc-eeeeeec
Confidence 334455556678999999999977888999999999999998763 11222334568899999999 4565554
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-CCCEEEEEE
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEW 419 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~ 419 (812)
-...-...+..-+.-..+..+ ....-+.+.+.|+|+|+.|| +||--- ....+..| .-.+..++|
T Consensus 154 rDCkdyv~i~~c~~W~ll~~f-~~dT~DltgieWsPdg~~la---------Vwd~~L-----eykv~aYe~~lG~k~v~w 218 (447)
T KOG4497|consen 154 RDCKDYVQISSCKAWILLKEF-KLDTIDLTGIEWSPDGNWLA---------VWDNVL-----EYKVYAYERGLGLKFVEW 218 (447)
T ss_pred ccHHHHHHHHhhHHHHHHHhc-CCCcccccCceECCCCcEEE---------Eecchh-----hheeeeeeeccceeEEEe
Confidence 211111111111111122223 33456678899999997655 566421 11111222 357899999
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec---CCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL---GQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
+|.+ ++|+.|+.|+.+++.+--+-+...+-.......+....+++... .+-...++.|.|..- =+.-....-.+
T Consensus 219 sP~~-qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~--~a~~~~~se~~ 295 (447)
T KOG4497|consen 219 SPCN-QFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL--EAHIWEESETI 295 (447)
T ss_pred cccc-ceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcc--ccCccccchhh
Confidence 9986 79999999999998765444322111000000000000000000 001123444544321 11111111011
Q ss_pred EEeCCCCCcccEE------eecCCCCeeEEEEcCCCCCeEEEeeCCCc-eEEEEeecccCcccccccccccccccCCCCC
Q psy4510 497 FRTISDLPSQLLF------IHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 497 ~~~~~~~~~~~~~------~~~~~~~i~~~~~~p~~~~~~i~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
|.... .+..... .......+..++|+++ ..++++..+.. +.+..+.+.++.-
T Consensus 296 YE~~~-~pv~~~~lkp~tD~pnPk~g~g~lafs~D--s~y~aTrnd~~PnalW~Wdlq~l~l------------------ 354 (447)
T KOG4497|consen 296 YEQQM-TPVKVHKLKPPTDFPNPKCGAGKLAFSCD--STYAATRNDKYPNALWLWDLQNLKL------------------ 354 (447)
T ss_pred hhhhh-cceeeecccCCCCCCCcccccceeeecCC--ceEEeeecCCCCceEEEEechhhhh------------------
Confidence 11100 0000000 0111236777999999 77888877654 5566655544111
Q ss_pred CccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCe
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL 649 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (812)
........+|....|.|...+|+.+ ....++++|...... .+
T Consensus 355 -----------~avLiQk~piraf~WdP~~prL~vc--tg~srLY~W~psg~~-------------------------~V 396 (447)
T KOG4497|consen 355 -----------HAVLIQKHPIRAFEWDPGRPRLVVC--TGKSRLYFWAPSGPR-------------------------VV 396 (447)
T ss_pred -----------hhhhhhccceeEEEeCCCCceEEEE--cCCceEEEEcCCCce-------------------------EE
Confidence 1122234588999999999999998 445679999876642 11
Q ss_pred eeecCCCCceEEEEeCCCCCCeEEecCCCc
Q psy4510 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKR 679 (812)
Q Consensus 650 ~~~~gh~~~V~~l~~sp~~~~~las~s~Dg 679 (812)
. ..+..-.|..+.|.- .|..++-.+.|.
T Consensus 397 ~-vP~~GF~i~~l~W~~-~g~~i~l~~kDa 424 (447)
T KOG4497|consen 397 G-VPKKGFNIQKLQWLQ-PGEFIVLCGKDA 424 (447)
T ss_pred e-cCCCCceeeeEEecC-CCcEEEEEcCCc
Confidence 1 122224788999998 677888877774
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.4e-17 Score=160.81 Aligned_cols=306 Identities=15% Similarity=0.168 Sum_probs=226.3
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC--CcEEEeeCCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK--TALQTVDDPF 245 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~--~~l~s~~~d~ 245 (812)
.-..+.+|.+.|..+.|+. .|..|++|+.|..|.+||...... ......+|...|....|-|.. +.+++++.||
T Consensus 134 l~~kL~~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~---~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dg 209 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSP---KLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDG 209 (559)
T ss_pred hhhcccCCCCccceeeecc-cCceeeccCccceEEeehhhccCc---ccccccccccchhhhhccCCCCCcCceeccccC
Confidence 3445567899999999999 999999999999999999988763 455567899999988887753 5789999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC---CE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN---SV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~---~v 322 (812)
.+++-.+.... .......+..|.+.|.-++.-|..+..|.+++.|+.+.-.|++......... ....+.. ..
T Consensus 210 qvr~s~i~~t~----~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~-cr~~~~~~~v~L 284 (559)
T KOG1334|consen 210 QVRVSEILETG----YVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV-CREADEKERVGL 284 (559)
T ss_pred ceeeeeecccc----ceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee-eeccCCccceee
Confidence 99998765531 2344556778999999999999998999999999999999998775322111 2222333 57
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc--------cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK--------SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd 394 (812)
.+++..|...+.|++++.|..+++||.|..... .|...+.......|++++|+.++.-|++...|-.|+++.
T Consensus 285 ~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~ 364 (559)
T KOG1334|consen 285 YTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFN 364 (559)
T ss_pred eeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEec
Confidence 899999999989999999999999999854322 111222223355799999998877566666777899994
Q ss_pred cCCCCCC----------CceEE-cccCCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 395 LRRFKKG----------SSVAT-FKHHTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 395 ~~~~~~~----------~~~~~-~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
-. .+.+ ..+.. +++|.. .|..+-|---...++++|+.-|.|.||+-.+.+
T Consensus 365 ~~-~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e---------------- 427 (559)
T KOG1334|consen 365 KS-MGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE---------------- 427 (559)
T ss_pred cc-cccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhH----------------
Confidence 33 2223 23334 788854 577887763335699999999999999988773
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.+.+......-|+++.-||..|.+..++-+..+.||-.
T Consensus 428 ii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 428 IIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred HHHHhhcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 22233333347899999999986665555667778755
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-16 Score=167.26 Aligned_cols=255 Identities=20% Similarity=0.328 Sum_probs=176.6
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCC---CCcEEEEEecC-CCCCEEEEEeCCCc
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH---LTEGFAMDWSS-TEPGVLATGDCKRN 296 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~sp-~~~~~l~sg~~dg~ 296 (812)
+...+-..+.|+|-...+++++..-.|+|||.+.+ +.+..|..+ ...|+.|.+-. +...++++|+.||.
T Consensus 1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~-------~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGv 1134 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKG-------RLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGV 1134 (1387)
T ss_pred cCCCCCceeeecCCCceeEEcCCcceEEEEecccC-------ceeccccCCCCCCCccceeeeecccchhheeeeccCce
Confidence 34446677889999999999998999999999875 444444333 35688888754 34468999999999
Q ss_pred EEEEeCCCCC-c-------ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 297 IHIWTPREAG-A-------WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 297 i~vwd~~~~~-~-------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
|+||+--... . |......+.+..+.=.-+.|.....+ |++++.-..|||||.. ...++..++.+....
T Consensus 1135 IRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~-Ll~tGd~r~IRIWDa~---~E~~~~diP~~s~t~ 1210 (1387)
T KOG1517|consen 1135 IRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGH-LLVTGDVRSIRIWDAH---KEQVVADIPYGSSTL 1210 (1387)
T ss_pred EEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCe-EEecCCeeEEEEEecc---cceeEeecccCCCcc
Confidence 9999754332 1 11111111222222245678877775 5555557899999998 445566676777778
Q ss_pred eEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC--EEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 369 VNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 369 v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|++++-+.. |+++++|..||.|++||.|.......+...+.|+.. |..+.+.+.|-.-|++|+.+|.|++||++...
T Consensus 1211 vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~ 1290 (1387)
T KOG1517|consen 1211 VTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSS 1290 (1387)
T ss_pred ceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCc
Confidence 888876654 589999999999999999976555678888999887 99999999876569999999999999999852
Q ss_pred chhHHHhhhhhccCCCceEEeecC-CCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 446 DSEIEQREAELKDLPSQLLFIHLG-QKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.. . .... ..+.. .+..+++..|++.+ ++++++...+.+|..
T Consensus 1291 ~e----------~-~~~i-v~~~~yGs~lTal~VH~hap-iiAsGs~q~ikIy~~ 1332 (1387)
T KOG1517|consen 1291 KE----------T-FLTI-VAHWEYGSALTALTVHEHAP-IIASGSAQLIKIYSL 1332 (1387)
T ss_pred cc----------c-ccee-eeccccCccceeeeeccCCC-eeeecCcceEEEEec
Confidence 10 0 0011 11111 12478888888865 444444444555543
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=164.71 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=185.5
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC-CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG-KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
.++..|...|++++|.+....|++++.++.|++|+++.. .......+|+.+|++|.++|.|++..+.+ ..+++|+.||
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~-~~~ysgg~Dg 366 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNG-EHCYSGGIDG 366 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCc-eEEEeeccCc
Confidence 477889999999999999999999999999999999442 12223568999999999999999999998 8999999999
Q ss_pred cEEEEeCCCCC------cceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCe
Q psy4510 296 NIHIWTPREAG------AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369 (812)
Q Consensus 296 ~i~vwd~~~~~------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 369 (812)
+|+.|++.... ...+....+.||.+.|+.+++++...+ |++|+.||++|+|+...... |....+..|.- -
T Consensus 367 ~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~-Llscs~DgTvr~w~~~~~~~--~~f~~~~e~g~-P 442 (577)
T KOG0642|consen 367 TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDR-LLSCSSDGTVRLWEPTEESP--CTFGEPKEHGY-P 442 (577)
T ss_pred eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccc-eeeecCCceEEeeccCCcCc--cccCCccccCC-c
Confidence 99999765322 233456788999999999999998885 99999999999999875332 33443333332 3
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccC-------CCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 370 NVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------TAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 370 ~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.++.+-.... +.++. .....+++..+...+.+..+... ...+..+.++|.. -+.+++..|+.|+++|.
T Consensus 443 lsvd~~ss~~a~~~~s---~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~-~~~~~~hed~~Ir~~dn 518 (577)
T KOG0642|consen 443 LSVDRTSSRPAHSLAS---FRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTA-DITFTAHEDRSIRFFDN 518 (577)
T ss_pred ceEeeccchhHhhhhh---cccccccchhhhhhhheeeccccCCCcccccCccceEEecCCC-CeeEecccCCceecccc
Confidence 4455543332 22322 33444444333344444444322 2357788899987 48999999999999999
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.++.. +.....+...++++++.|+++.++.+..+..+.+|+.
T Consensus 519 ~~~~~----------------l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kl 560 (577)
T KOG0642|consen 519 KTGKI----------------LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKL 560 (577)
T ss_pred ccccc----------------chheeeccceecceeecCCCceEEeecCCceeehhhc
Confidence 88842 2223333457999999999975555555545555543
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-15 Score=165.69 Aligned_cols=272 Identities=11% Similarity=0.086 Sum_probs=185.5
Q ss_pred CCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc---cccccccCCCCCCeeeeeEcCCCCcEEE
Q psy4510 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW---QVDQKPLGGHTNSAEDLQWSDLKTALQT 240 (812)
Q Consensus 164 ~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~l~s 240 (812)
++...|+|+..|...|..++.++..+.+++|||.||+|+||+....... .....++.....++.++.+.+.+.++|.
T Consensus 1036 p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av 1115 (1431)
T KOG1240|consen 1036 PRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAV 1115 (1431)
T ss_pred ccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEE
Confidence 4467799998999999999998856799999999999999998753321 1122233335678999999999999999
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEcCCC--CcEEEEEecCCCCC-EEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
++.||.|++.+++.-...............+. .-+...+|...... .|+.+..-+.|..||++........ ...-
T Consensus 1116 ~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~l--k~~~ 1193 (1431)
T KOG1240|consen 1116 STKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRL--KNQL 1193 (1431)
T ss_pred EcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhh--hcCc
Confidence 99999999999877311111112222222222 22334445444334 7888888899999999876531111 1222
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC---EEEEEe--CCCcEEE
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGG--DDGCIHV 392 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~---~l~sg~--~dg~i~i 392 (812)
..+.|++++.+|.+. ++++|+..|.+.+||+| -...+......+..+++.+..+|..+ ..++++ ..+.|.+
T Consensus 1194 ~hG~vTSi~idp~~~-WlviGts~G~l~lWDLR---F~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~ 1269 (1431)
T KOG1240|consen 1194 RHGLVTSIVIDPWCN-WLVIGTSRGQLVLWDLR---FRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVST 1269 (1431)
T ss_pred cccceeEEEecCCce-EEEEecCCceEEEEEee---cCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceee
Confidence 347899999999998 79999999999999999 45556666567778888888877543 444444 4688999
Q ss_pred EecCCCCCCCceEEcccC-------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 393 WDLRRFKKGSSVATFKHH-------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~h-------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|++.+. ..-..+... .-......+. .+..++.+|+.|..|+.||.....
T Consensus 1270 wn~~~g---~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~-~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1270 WNMETG---LRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVC-EKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred eecccC---cceEEEEcCCCCcchhhhcccccCCCCCcccceeeecc-cCCceeeecCCccceeeccCCCcc
Confidence 999853 222222111 0111112222 233589999999999999988763
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-13 Score=144.58 Aligned_cols=285 Identities=8% Similarity=0.075 Sum_probs=175.1
Q ss_pred EEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcC
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSG 270 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 270 (812)
.++...++.|++|++.+..... ....+. +.+....++++|++++|++++ .++.|.+|++.... ....+....
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~-~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g----~l~~~~~~~- 77 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALT-LLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDG----ALTFAAESP- 77 (330)
T ss_pred EEEcCCCCCEEEEEECCCCcee-eeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCC----ceEEeeeec-
Confidence 3444678999999996433211 223332 345677899999999987765 57889999986310 111122221
Q ss_pred CCCcEEEEEecCCCCCEEEEE-eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEEC
Q psy4510 271 HLTEGFAMDWSSTEPGVLATG-DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349 (812)
Q Consensus 271 h~~~v~~l~~sp~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 349 (812)
..+....++|+|++ ++|+++ ..++.|.+|++.+.+........+. +......++++|+++.++++...++.|.+||+
T Consensus 78 ~~~~p~~i~~~~~g-~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~ 155 (330)
T PRK11028 78 LPGSPTHISTDHQG-RFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTL 155 (330)
T ss_pred CCCCceEEEECCCC-CEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEE
Confidence 23356789999999 555554 4589999999975432111112222 23346778999999977778888899999999
Q ss_pred CCCCcccc--eeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCC-CCCceEEcccC------CCCEEEEEE
Q psy4510 350 RVINTKSC--MLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFK-KGSSVATFKHH------TAPVTTVEW 419 (812)
Q Consensus 350 ~~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~-~~~~~~~~~~h------~~~v~~v~~ 419 (812)
........ ..............++|+|++++++++.. ++.|.+|++.... ....+..+..+ ......+.+
T Consensus 156 ~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~ 235 (330)
T PRK11028 156 SDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHI 235 (330)
T ss_pred CCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEE
Confidence 75221110 00010112344678999999998877765 8999999997311 11223332211 112346889
Q ss_pred ccCCCcEEEEEE-CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEE
Q psy4510 420 HPTESSTFASGG-ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIF 497 (812)
Q Consensus 420 ~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~ 497 (812)
+|++. +|+++. .++.|.+|++...... ..+............+.++|++..++++... +.+.+|
T Consensus 236 ~pdg~-~lyv~~~~~~~I~v~~i~~~~~~-------------~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~ 301 (330)
T PRK11028 236 TPDGR-HLYACDRTASLISVFSVSEDGSV-------------LSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVY 301 (330)
T ss_pred CCCCC-EEEEecCCCCeEEEEEEeCCCCe-------------EEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEE
Confidence 99974 666654 4789999999654210 0111111111245678999999888887764 446666
Q ss_pred Ee
Q psy4510 498 RT 499 (812)
Q Consensus 498 ~~ 499 (812)
..
T Consensus 302 ~~ 303 (330)
T PRK11028 302 EI 303 (330)
T ss_pred EE
Confidence 54
|
|
| >PF12265 CAF1C_H4-bd: Histone-binding protein RBBP4 or subunit C of CAF1 complex; InterPro: IPR022052 The CAF-1 complex is a conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically it facilitates replication-dependent nucleosome assembly with the major histone H3 (H3 | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-18 Score=130.25 Aligned_cols=68 Identities=43% Similarity=0.597 Sum_probs=50.1
Q ss_pred CCee--eeChhHHhhhhccCCCCCeeeEEEEecCC-CCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCC
Q psy4510 63 GESL--VYDPSAYVMLHEAQTGAPCLSFDIIKDEL-GDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLT 131 (812)
Q Consensus 63 ~~~~--~~d~~~y~~~~~~~~~~p~ls~~~~~d~~-~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~ 131 (812)
++++ .++|.+|+|+|.++++||||||||+||.. +.++ ++|+++++++||||++.++|+|+|+++.++.
T Consensus 3 ~~~lWk~n~p~lYd~~~~~~l~WPsLS~dwlpd~~~~~~~-~~~~~~~ll~GT~t~~~~~n~l~v~~~~~p~ 73 (74)
T PF12265_consen 3 EYELWKKNDPSLYDLLHTHSLEWPSLSFDWLPDSLEGDNR-NYPHSQYLLLGTQTSGQEQNYLYVMKVSLPS 73 (74)
T ss_dssp HHHHHHHHHHHHEEEEEEEE-SS--S-EEEEEEEEE--TT--SEEEEEEEEE---SS-S-EEEEEEEEEEE-
T ss_pred ceeehhhCCHHHHHHHhhccCCCCCeEEEECcCcccccCC-CCccEEEEEEEECcCCCCCCEEEEEEEeCCC
Confidence 3456 78899999999999999999999999998 6777 8999999999999999999999999997654
|
1). This domain is an alpha helix which sits just upstream of the WD40 seven-bladed beta-propeller in the human RbAp46 protein. RbAp46 folds into the beta-propeller and binds histone H4 in a groove formed between this N-terminal helix and an extended loop inserted into blade six []. ; PDB: 2YBA_A 3C99_A 2YB8_B 2XYI_A 3C9C_A 3CFV_B 3CFS_B 2XU7_A 3GFC_A. |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=160.11 Aligned_cols=238 Identities=15% Similarity=0.127 Sum_probs=159.2
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---CceEEeeCCCCCCCCCCCCCceEEcCCCCc
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---FQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~ 274 (812)
+..|.|||..... .+.+..|...+.+++|||+|++|+.++.+ ..|.+||+.++ ..+.+..+.+|.
T Consensus 183 ~~~i~i~d~dg~~-----~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg-----~~~~l~~~~g~~-- 250 (429)
T PRK01742 183 PYEVRVADYDGFN-----QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSG-----ARKVVASFRGHN-- 250 (429)
T ss_pred eEEEEEECCCCCC-----ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCC-----ceEEEecCCCcc--
Confidence 5789999987654 34567788899999999999999987643 46999999875 223333344443
Q ss_pred EEEEEecCCCCCEEEE-EeCCCcEEEE--eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 275 GFAMDWSSTEPGVLAT-GDCKRNIHIW--TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 275 v~~l~~sp~~~~~l~s-g~~dg~i~vw--d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
..++|+|++ ..|+. .+.+|.+.|| |+.++. ...+..+...+...+|+|+|+.+++++..+|...||++..
T Consensus 251 -~~~~wSPDG-~~La~~~~~~g~~~Iy~~d~~~~~-----~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~ 323 (429)
T PRK01742 251 -GAPAFSPDG-SRLAFASSKDGVLNIYVMGANGGT-----PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSA 323 (429)
T ss_pred -CceeECCCC-CEEEEEEecCCcEEEEEEECCCCC-----eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 468999999 55555 4568876665 555443 3445667777889999999997666666788899998764
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
..... ..+ .+.. .+.+|+|+|+.|+.++.++ +.+||+.. +........+ ...++.|+|++ .+|+.++
T Consensus 324 ~~~~~--~~l--~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~---g~~~~lt~~~--~~~~~~~sPdG-~~i~~~s 390 (429)
T PRK01742 324 SGGGA--SLV--GGRG--YSAQISADGKTLVMINGDN-VVKQDLTS---GSTEVLSSTF--LDESPSISPNG-IMIIYSS 390 (429)
T ss_pred CCCCe--EEe--cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCC---CCeEEecCCC--CCCCceECCCC-CEEEEEE
Confidence 32211 112 2222 4578999999888877765 66699874 3322222222 23567899997 5888888
Q ss_pred CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 432 ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 432 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.++.+.+|.+...... .......+...+...+|+|.
T Consensus 391 ~~g~~~~l~~~~~~G~--------------~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 391 TQGLGKVLQLVSADGR--------------FKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred cCCCceEEEEEECCCC--------------ceEEccCCCCCCCCcccCCC
Confidence 8898888876432110 12222233456788899885
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.9e-15 Score=145.33 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=153.9
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPG 259 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~ 259 (812)
.+++|+. +|..||||+.||++|||+..+.. .......|...|.+|.|||||+.|++.+.+ ..+||+..++
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~----t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g---- 217 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSML----TILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG---- 217 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcch----hhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccC----
Confidence 7899999 99999999999999999977665 556778899999999999999999999999 9999999987
Q ss_pred CCCCCceEEc--CCCCcEEEEEecCCC--CC-EEEE-EeCCCcEEEEeCCCCCcc-eeccccccCCCCCEEEEEEcCCCC
Q psy4510 260 IPTPPLFSFS--GHLTEGFAMDWSSTE--PG-VLAT-GDCKRNIHIWTPREAGAW-QVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 260 ~~~~~~~~~~--~h~~~v~~l~~sp~~--~~-~l~s-g~~dg~i~vwd~~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
.++.... .-.-....+.|+.++ +. ++++ -..-+.|+.|++...... ....+....-...|++++.+++|+
T Consensus 218 ---~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGk 294 (398)
T KOG0771|consen 218 ---AALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGK 294 (398)
T ss_pred ---chhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCc
Confidence 3333332 122345577777664 12 3333 334556777766443210 001222222335799999999999
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+++.|+.||.|.|++.. ..+++.-.+.+|..-|+.+.|+|+.+++++.+.+....|..+.
T Consensus 295 -f~AlGT~dGsVai~~~~---~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 295 -FLALGTMDGSVAIYDAK---SLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred -EEEEeccCCcEEEEEec---eeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 79999999999999998 5566777789999999999999999999999999888888775
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.2e-13 Score=121.86 Aligned_cols=240 Identities=11% Similarity=0.231 Sum_probs=165.9
Q ss_pred CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc----cccCCCC-----CCeeeeeEcCCCCcEEEeeC
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ----KPLGGHT-----NSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~----~~l~~h~-----~~V~~l~~s~~~~~l~s~~~ 243 (812)
++|.++|+.++|.. ++|.+|+ ||.|+=|..+......... ....-|. -.|++|...|...-++.++.
T Consensus 59 qahdgpiy~~~f~d---~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgG 134 (325)
T KOG0649|consen 59 QAHDGPIYYLAFHD---DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGG 134 (325)
T ss_pred cccCCCeeeeeeeh---hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecC
Confidence 49999999999964 7788887 5999999776543211111 1111222 36889999999988888889
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-----ccccCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-----KPLVGH 318 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-----~~~~~h 318 (812)
|+.+.-||+++| +....++||++-+.++.-.... ..+++|+.||++++||.++++...+.. ..+..|
T Consensus 135 D~~~y~~dlE~G-------~i~r~~rGHtDYvH~vv~R~~~-~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~ 206 (325)
T KOG0649|consen 135 DGVIYQVDLEDG-------RIQREYRGHTDYVHSVVGRNAN-GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPD 206 (325)
T ss_pred CeEEEEEEecCC-------EEEEEEcCCcceeeeeeecccC-cceeecCCCccEEEEeccccceeEEeccccChhhcCcc
Confidence 999999999997 7888999999999999985444 689999999999999999987532211 111222
Q ss_pred -CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 319 -TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 319 -~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
...|-+++-+. . .++ |+....+.+|.++... ..++..+ ..++.-+.|.. ..+++++..+.|.-|.+.
T Consensus 207 ~g~wigala~~e--d-Wlv-CGgGp~lslwhLrsse-~t~vfpi----pa~v~~v~F~~--d~vl~~G~g~~v~~~~l~- 274 (325)
T KOG0649|consen 207 WGKWIGALAVNE--D-WLV-CGGGPKLSLWHLRSSE-STCVFPI----PARVHLVDFVD--DCVLIGGEGNHVQSYTLN- 274 (325)
T ss_pred cCceeEEEeccC--c-eEE-ecCCCceeEEeccCCC-ceEEEec----ccceeEeeeec--ceEEEeccccceeeeeec-
Confidence 23566666543 3 454 4445789999999543 2334433 45677778764 378888888899999984
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
+..-...+......++..|+..--.+|..++..+.+.++
T Consensus 275 ---Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 275 ---GVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred ---cEEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence 444444444445566666654433466666666666665
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-15 Score=148.59 Aligned_cols=261 Identities=12% Similarity=0.197 Sum_probs=201.3
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
-+.+.|+. +|+.|+.||.-|.|--+|..+... ..-..-...|..+.|-...+++|++ ....+.|||-..
T Consensus 132 PY~~~ytr-nGrhlllgGrKGHlAa~Dw~t~~L-----~~Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~G---- 200 (545)
T KOG1272|consen 132 PYHLDYTR-NGRHLLLGGRKGHLAAFDWVTKKL-----HFEINVMETVRDVTFLHNEQFFAVA-QKKYVYVYDNNG---- 200 (545)
T ss_pred CeeeeecC-CccEEEecCCccceeeeeccccee-----eeeeehhhhhhhhhhhcchHHHHhh-hhceEEEecCCC----
Confidence 46689999 999999999999999999988652 1122335678899998888888776 557789998665
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
..++.++.| .+|..|.|.|.. .+|++++..|.++--|+..++ ....+..-.+.+..++-+|-+. ++-+|
T Consensus 201 ----tElHClk~~-~~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~Gk----lVa~~~t~~G~~~vm~qNP~Na-Vih~G 269 (545)
T KOG1272|consen 201 ----TELHCLKRH-IRVARLEFLPYH-FLLVAASEAGFLKYQDVSTGK----LVASIRTGAGRTDVMKQNPYNA-VIHLG 269 (545)
T ss_pred ----cEEeehhhc-Cchhhhcccchh-heeeecccCCceEEEeechhh----hhHHHHccCCccchhhcCCccc-eEEEc
Confidence 667777765 568999999998 789999999999999999998 5666777778899999999888 89999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
...|+|.+|... ...++..+ ..|.++|.+|++.++|++++|.|.|..++|||+|++. .+.++.. ..+...++
T Consensus 270 hsnGtVSlWSP~---skePLvKi-LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~---ql~t~~t-p~~a~~ls 341 (545)
T KOG1272|consen 270 HSNGTVSLWSPN---SKEPLVKI-LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY---QLHTYRT-PHPASNLS 341 (545)
T ss_pred CCCceEEecCCC---CcchHHHH-HhcCCCcceEEECCCCcEEeecccccceeEeeecccc---ccceeec-CCCccccc
Confidence 999999999987 45556666 6899999999999999999999999999999999744 3444433 34667888
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
+|..| +||. +....|.+|.=..... .........|.....|..+.|.|-..
T Consensus 342 ~Sqkg--lLA~-~~G~~v~iw~d~~~~s-----------~~~~~pYm~H~~~~~V~~l~FcP~ED 392 (545)
T KOG1272|consen 342 LSQKG--LLAL-SYGDHVQIWKDALKGS-----------GHGETPYMNHRCGGPVEDLRFCPYED 392 (545)
T ss_pred ccccc--ceee-ecCCeeeeehhhhcCC-----------CCCCcchhhhccCcccccceeccHHH
Confidence 88764 4444 4445799995332211 01112334455555899999999753
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-12 Score=133.29 Aligned_cols=526 Identities=13% Similarity=0.119 Sum_probs=304.3
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-----------cccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-----------QVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-----------~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
....|++|+. ...+||+||.||.+++-.+.+...- ...-++|.||++.|.-+.|+...+.|-+...+|
T Consensus 15 vkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 15 VKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred ceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 4578999999 9999999999999999987754321 112357899999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|.||-+-.+ ..-.-..-...++-|.+++|+.+| ..++....||.|.|=.+....-|.. .+++. ....+
T Consensus 94 lIiVWmlykg-----sW~EEMiNnRnKSvV~SmsWn~dG-~kIcIvYeDGavIVGsvdGNRIwgK---eLkg~--~l~hv 162 (1189)
T KOG2041|consen 94 LIIVWMLYKG-----SWCEEMINNRNKSVVVSMSWNLDG-TKICIVYEDGAVIVGSVDGNRIWGK---ELKGQ--LLAHV 162 (1189)
T ss_pred eEEEEeeecc-----cHHHHHhhCcCccEEEEEEEcCCC-cEEEEEEccCCEEEEeeccceecch---hcchh--eccce
Confidence 9999998876 222222233456778999999999 7889999999999888776653322 22221 23478
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCc----ccceeec---CCcCCCCeEEEEEc--------CCCCEEEEEeCCCcE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINT----KSCMLTL---PNAHTSDVNVISWN--------RTEPLIVSGGDDGCI 390 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~---~~~~~~~v~~l~~~--------~~~~~l~sg~~dg~i 390 (812)
.|+++.+ +++.+-.+|.+.++|....-. ..|.... .......|..+.|. |+.+.|+.+...|.+
T Consensus 163 ~ws~D~~-~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~ 241 (1189)
T KOG2041|consen 163 LWSEDLE-QALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRM 241 (1189)
T ss_pred eecccHH-HHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCcee
Confidence 9999998 467777889999999753211 1121111 01223346667775 466799999999999
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC---------CEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD---------QIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg---------~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
.|-.-.+ ...|+..-. .-.|..+.|+++| .+|+.+|.+. .|.++..-..
T Consensus 242 QiMR~eN--D~~Pvv~dt--gm~~vgakWnh~G-~vLAvcG~~~da~~~~d~n~v~Fysp~G~----------------- 299 (1189)
T KOG2041|consen 242 QIMRSEN--DPEPVVVDT--GMKIVGAKWNHNG-AVLAVCGNDSDADEPTDSNKVHFYSPYGH----------------- 299 (1189)
T ss_pred hhhhhcC--CCCCeEEec--ccEeecceecCCC-cEEEEccCcccccCccccceEEEeccchh-----------------
Confidence 8865543 444544333 2568899999998 5899888653 2333322111
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc------ccEEeecC-CCCeeEE--------------
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS------QLLFIHLG-QKEIKEL-------------- 520 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~i~~~-------------- 520 (812)
.+-......+.|+.++|-.. ++-++-+-+++..|-.+...-. ..++...+ ..+-..+
T Consensus 300 i~gtlkvpg~~It~lsWEg~--gLriA~AvdsfiyfanIRP~ykWgy~e~TvVy~y~~~e~p~y~i~Fwdtk~nek~vK~ 377 (1189)
T KOG2041|consen 300 IVGTLKVPGSCITGLSWEGT--GLRIAIAVDSFIYFANIRPEYKWGYIEETVVYVYQKEELPQYGIMFWDTKTNEKTVKT 377 (1189)
T ss_pred heEEEecCCceeeeeEEcCC--ceEEEEEecceEEEEeecccceEEEeeeEEEEEEccCCCcceEEEEEecccChhhhhh
Confidence 23333444567999999877 5555556666655544332111 11111111 1111112
Q ss_pred -------EEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEE
Q psy4510 521 -------HWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRV 593 (812)
Q Consensus 521 -------~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 593 (812)
+++.. .-+++...+..++-..-.+.+ .+.+-+- ..-......+...-..|.-.
T Consensus 378 V~~~~~~a~~~e--hCvL~~~~d~~~i~e~s~le~------~~~~~~l------------~LCNSIGT~lD~kytdirP~ 437 (1189)
T KOG2041|consen 378 VTHFENMAFYRE--HCVLINRQDDGVIPEYSTLEN------RSRVYFL------------QLCNSIGTSLDYKYTDIRPK 437 (1189)
T ss_pred hcceeehheecc--cEEEEeccccCCCcchhhhhc------ccceEEE------------eeecccCCcCCCCcceeeee
Confidence 22211 111111111100000000000 0000000 00000000001111122222
Q ss_pred EEeccCCeEEEEeecCcceEEEEecccccccc--CC-----cccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCC
Q psy4510 594 RTCQYGSTTLAGVWGEVGKVGIWDLKTALQTV--DD-----PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 666 (812)
Q Consensus 594 ~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp 666 (812)
-..-++..++.+ | ...+.+|.....+... .. +.+......+.+........-.+++.|-..+|-+++.+.
T Consensus 438 Fv~vn~~~vviA--S-~e~~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~sd 514 (1189)
T KOG2041|consen 438 FVCVNGICVVIA--S-EERYFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCISD 514 (1189)
T ss_pred EEEecceEEEEe--c-cccEEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCCCcceeeeecc
Confidence 233355556666 4 4477889876654221 00 011000000011011111222467788889999999975
Q ss_pred CCCCeEEecCCCceEEEEecCCCceeEEE---------EecCCCCEEEeecCCCeEEEeecC---CCCCcccccccccCC
Q psy4510 667 TEPGVLATGDCKRNIHIWTPREAGAWSVY---------LYTNRFGVLATGDCKRNIHIWTPR---EAGAWQVDQKPLVGH 734 (812)
Q Consensus 667 ~~~~~las~s~Dg~v~iWd~~~~~~~~~~---------~~s~dg~~lasgs~dg~i~iwd~~---~~~~~~~~~~~~~gH 734 (812)
++|..|-..|.|.-+.+..+.+..-. ...-+...+|.-..-|.+.+.|+. ++.. +...++..
T Consensus 515 ---k~l~vareSG~I~rySl~nv~l~n~y~~n~~~y~~~lNCnstRlAiId~~gv~tf~dLd~d~~g~q---l~~~~~~e 588 (1189)
T KOG2041|consen 515 ---KFLMVARESGGIYRYSLNNVVLTNSYPVNPSIYSIKLNCNSTRLAIIDLVGVVTFQDLDYDFDGDQ---LKLIYTSE 588 (1189)
T ss_pred ---eEEEEEeccCceEEEEecceeeeeccccCchheeEeeccCcchhhhhhhhceeeeeecccccCcce---eeeeehhh
Confidence 59999999999999999875444322 223344567777777888887775 2332 23344555
Q ss_pred CcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 735 TNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 735 ~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+..|+++.|..|.. .|+.--.-..+.|++-.+++
T Consensus 589 rrDVWd~~Wa~dNp-~llAlmeKtrmyifrgndpe 622 (1189)
T KOG2041|consen 589 RRDVWDYEWAQDNP-NLLALMEKTRMYIFRGNDPE 622 (1189)
T ss_pred hhhhhhhhhccCCc-hHHhhhhhceEEEecCcCcc
Confidence 67899999999887 45555555567777655554
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-13 Score=144.04 Aligned_cols=259 Identities=12% Similarity=0.108 Sum_probs=161.4
Q ss_pred CceEEEEeCCCCCCeEEEe-cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATG-DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~-~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~ 254 (812)
+....++++| ++++|+++ ..++.|.+|++....... ..... ........++|+|++++|++++ .++.|.+|++..
T Consensus 35 ~~~~~l~~sp-d~~~lyv~~~~~~~i~~~~~~~~g~l~-~~~~~-~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~ 111 (330)
T PRK11028 35 GQVQPMVISP-DKRHLYVGVRPEFRVLSYRIADDGALT-FAAES-PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDK 111 (330)
T ss_pred CCCccEEECC-CCCEEEEEECCCCcEEEEEECCCCceE-Eeeee-cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECC
Confidence 3455689999 99988665 458899999997332211 11111 1223467899999999998876 488999999864
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee---ccccccCCCCCEEEEEEcCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV---DQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~~~~~h~~~v~~~~~~p~~ 331 (812)
... ....+..+. +.....+++++|++..++++...++.|.+||+.+.+.... ...... .......+.|+|++
T Consensus 112 ~g~---~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg 186 (330)
T PRK11028 112 DGI---PVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQ 186 (330)
T ss_pred CCC---CCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCC
Confidence 210 112222232 2344678899999944456666779999999986432110 000111 12346789999999
Q ss_pred CeEEEEEECCCeEEEEECCCCC-cccceeecC---C--cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCC-Cc
Q psy4510 332 KRVLASCSVDLSIRIWDTRVIN-TKSCMLTLP---N--AHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKG-SS 403 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~---~--~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~-~~ 403 (812)
+.++++...+++|.+|++.... ....+..+. . .+......+.++|++++++++.. ++.|.+|++...... ..
T Consensus 187 ~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~ 266 (330)
T PRK11028 187 QYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSF 266 (330)
T ss_pred CEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEE
Confidence 9655555559999999997321 112222221 1 11223346889999998888754 789999999641110 11
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+..... ......+.++|++..++++...+++|.+|++...
T Consensus 267 ~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 267 EGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred eEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcCC
Confidence 222221 1234578999998644445545899999988643
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.8e-14 Score=141.20 Aligned_cols=298 Identities=14% Similarity=0.176 Sum_probs=206.2
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCe-EEEecCCCcEEEEccCCCCcccccccccCCCC--CCeeeeeEcCCCCcEEEee
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGV-LATGDCKRNIHIWTPREAGAWQVDQKPLGGHT--NSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~-lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~l~s~~ 242 (812)
+..|..| +|....+.|..+| +|++ +|||..-..|++||+.+.. ..+..|. ..|.-.-++.|-..++...
T Consensus 42 ieLiQdf-e~p~ast~ik~s~-DGqY~lAtG~YKP~ikvydlanLS------LKFERhlDae~V~feiLsDD~SK~v~L~ 113 (703)
T KOG2321|consen 42 IELIQDF-EMPTASTRIKVSP-DGQYLLATGTYKPQIKVYDLANLS------LKFERHLDAEVVDFEILSDDYSKSVFLQ 113 (703)
T ss_pred HHHHHhc-CCccccceeEecC-CCcEEEEecccCCceEEEEcccce------eeeeecccccceeEEEeccchhhheEee
Confidence 4667888 8999999999999 8885 5789999999999998743 3444554 3456666677777777777
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.|.+|.+...-. ..++++ -......++++.-... |++++....|+-+++..+. .+.++....+.+
T Consensus 114 ~DR~IefHak~G---------~hy~~R-IP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGr----fL~P~~~~~~~l 178 (703)
T KOG2321|consen 114 NDRTIEFHAKYG---------RHYRTR-IPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGR----FLNPFETDSGEL 178 (703)
T ss_pred cCceeeehhhcC---------eeeeee-cCcCCccccccCCCcc-EEEeecCcceEEEEccccc----cccccccccccc
Confidence 777776654322 111221 1234556777655533 4444445678889999887 677788778999
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec--CCcCCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL--PNAHTS-----DVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~-----~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
++|..++-.. +|++|+.+|.|-+||.|..+....+-.. -..|.+ .|+++.|+.+|-.+++|+.+|.+.|||+
T Consensus 179 N~v~in~~hg-Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDL 257 (703)
T KOG2321|consen 179 NVVSINEEHG-LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDL 257 (703)
T ss_pred eeeeecCccc-eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEc
Confidence 9999999888 8999999999999999964332221111 022333 3999999999989999999999999999
Q ss_pred CCCCCCCceEE-cccCCCCEEEEEEccCCCc-EEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 396 RRFKKGSSVAT-FKHHTAPVTTVEWHPTESS-TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 396 ~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
|. .+++.. -.+..-+|..+.|.+.+.+ .+++. ....++|||-.+++. .........+
T Consensus 258 Ra---~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~-----------------~asiEpt~~l 316 (703)
T KOG2321|consen 258 RA---SKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKP-----------------MASIEPTSDL 316 (703)
T ss_pred cc---CCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCc-----------------eeeccccCCc
Confidence 95 444433 2334668999999887433 44444 356899999888742 2222233468
Q ss_pred eEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 474 KELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
+.+++-|+...++++-....+..|......+...+
T Consensus 317 ND~C~~p~sGm~f~Ane~~~m~~yyiP~LGPaPrW 351 (703)
T KOG2321|consen 317 NDFCFVPGSGMFFTANESSKMHTYYIPSLGPAPRW 351 (703)
T ss_pred CceeeecCCceEEEecCCCcceeEEccccCCCchh
Confidence 99999998755555555555666666555554443
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=155.71 Aligned_cols=222 Identities=16% Similarity=0.114 Sum_probs=155.0
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCC---CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCce
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQL 247 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~d---g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i 247 (812)
+.+|...+...+||| +|+.||..+.+ ..|++||+.++... ....+.+| ..+++|+|+|++|+.++ .++.+
T Consensus 199 lt~~~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~--~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~ 272 (429)
T PRK01742 199 VNRSSQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARK--VVASFRGH---NGAPAFSPDGSRLAFASSKDGVL 272 (429)
T ss_pred eccCCCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceE--EEecCCCc---cCceeECCCCCEEEEEEecCCcE
Confidence 346677899999999 99999887543 46999999876521 22333444 34689999999988765 67876
Q ss_pred EEe--eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 248 AEH--NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 248 ~vw--d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|| ++.+ .....+..+...+....|+|++..+++++..+|...||++...... ...+ .+.. ...
T Consensus 273 ~Iy~~d~~~--------~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~---~~~l-~~~~--~~~ 338 (429)
T PRK01742 273 NIYVMGANG--------GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGG---ASLV-GGRG--YSA 338 (429)
T ss_pred EEEEEECCC--------CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCC---eEEe-cCCC--CCc
Confidence 666 4444 3345666777788899999999545556667888999987654321 1112 3333 457
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
+|+|+++. |+.++.++ +.+||+.++.. . .+...+ ....++|+|+|++|+.++.+|.+.+|.+... .+..+.
T Consensus 339 ~~SpDG~~-ia~~~~~~-i~~~Dl~~g~~---~-~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~-~G~~~~ 409 (429)
T PRK01742 339 QISADGKT-LVMINGDN-VVKQDLTSGST---E-VLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSA-DGRFKA 409 (429)
T ss_pred cCCCCCCE-EEEEcCCC-EEEEECCCCCe---E-EecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCceE
Confidence 89999995 65666555 55699875432 1 111111 2356789999999999999998888876431 466788
Q ss_pred EcccCCCCEEEEEEccC
Q psy4510 406 TFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~ 422 (812)
.+..|.+.+..++|+|-
T Consensus 410 ~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 410 RLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EccCCCCCCCCcccCCC
Confidence 88888888999999985
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=142.55 Aligned_cols=203 Identities=16% Similarity=0.181 Sum_probs=153.5
Q ss_pred eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 227 ~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
.+++|+.+|..|++++.||++|||+... ...+.....|.++|.+|.|+|++ .+|++-+.| ..+||++.++.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps-------~~t~l~e~~~~~eV~DL~FS~dg-k~lasig~d-~~~VW~~~~g~ 218 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPS-------MLTILEEIAHHAEVKDLDFSPDG-KFLASIGAD-SARVWSVNTGA 218 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCc-------chhhhhhHhhcCccccceeCCCC-cEEEEecCC-ceEEEEeccCc
Confidence 7899999999999999999999999766 37777788899999999999999 799999998 89999999985
Q ss_pred cceeccccccCCCCCEEEEEEcCCC---Ce-EEEEEECCCeEEEEECCCCCcccc--eeecCCcCCCCeEEEEEcCCCCE
Q psy4510 307 AWQVDQKPLVGHTNSVEDLQWSPGE---KR-VLASCSVDLSIRIWDTRVINTKSC--MLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 307 ~~~~~~~~~~~h~~~v~~~~~~p~~---~~-~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
.+.. ..-..-.-....+.|+.++ .. +++....-+.|+.||+..-..... ..+. ......|++++.+.+|++
T Consensus 219 ~~a~--~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~-~~~~~siSsl~VS~dGkf 295 (398)
T KOG0771|consen 219 ALAR--KTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKK-IKRFKSISSLAVSDDGKF 295 (398)
T ss_pred hhhh--cCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhh-hhccCcceeEEEcCCCcE
Confidence 3211 1112233356677887766 21 334444556777777653222111 1111 122357999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++.|+.||.|.|++...++ .....-+.|..-|+.+.|+|+. +++++.+.+.+..+.-+...
T Consensus 296 ~AlGT~dGsVai~~~~~lq--~~~~vk~aH~~~VT~ltF~Pds-r~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 296 LALGTMDGSVAIYDAKSLQ--RLQYVKEAHLGFVTGLTFSPDS-RYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred EEEeccCCcEEEEEeceee--eeEeehhhheeeeeeEEEcCCc-CcccccccCCceeEEEEeec
Confidence 9999999999999997522 2333446799999999999984 78999999999999888764
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-13 Score=127.36 Aligned_cols=193 Identities=17% Similarity=0.297 Sum_probs=136.0
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
..+..++|++.- ..+|++..|-.|++|+-.... ...++ .....|++++|.|.+...|+.|+. +-|+||....
T Consensus 99 ~dlr~~aWhqH~-~~fava~nddvVriy~ksst~-----pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~ 171 (445)
T KOG2139|consen 99 IDLRGVAWHQHI-IAFAVATNDDVVRIYDKSSTC-----PTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSR 171 (445)
T ss_pred cceeeEeechhh-hhhhhhccCcEEEEeccCCCC-----CceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCc
Confidence 456789999965 678999999999999977632 22232 234589999999998887888776 6699997642
Q ss_pred CCc-cc--------ceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 352 INT-KS--------CMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 352 ~~~-~~--------~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
... .. +...+.......|+++.|+++|..+++++. |..|.|||... +..+.......+.++-+.|+|
T Consensus 172 tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdt---g~~~pL~~~glgg~slLkwSP 248 (445)
T KOG2139|consen 172 TLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDT---GQKIPLIPKGLGGFSLLKWSP 248 (445)
T ss_pred ccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCC---CCcccccccCCCceeeEEEcC
Confidence 111 11 111111222378999999999998888775 67899999984 333333334467788999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
++ .+|++++-|+..++|+...... ...-..+.+.|....|+|.+..+++++...
T Consensus 249 dg-d~lfaAt~davfrlw~e~q~wt----------------~erw~lgsgrvqtacWspcGsfLLf~~sgs 302 (445)
T KOG2139|consen 249 DG-DVLFAATCDAVFRLWQENQSWT----------------KERWILGSGRVQTACWSPCGSFLLFACSGS 302 (445)
T ss_pred CC-CEEEEecccceeeeehhcccce----------------ecceeccCCceeeeeecCCCCEEEEEEcCC
Confidence 98 4888888899999996654321 111223345899999999998777776543
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-13 Score=127.56 Aligned_cols=248 Identities=16% Similarity=0.256 Sum_probs=162.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
-.+..++|++ .-.-+|++..|-.|+||+-.... ...++ .....|+|++|-|.+..-++.+-.+.|.+|.....
T Consensus 99 ~dlr~~aWhq-H~~~fava~nddvVriy~ksst~-----pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~t 172 (445)
T KOG2139|consen 99 IDLRGVAWHQ-HIIAFAVATNDDVVRIYDKSSTC-----PTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRT 172 (445)
T ss_pred cceeeEeech-hhhhhhhhccCcEEEEeccCCCC-----CceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcc
Confidence 3578899999 77788899999999999876632 22232 33457999999998765555555567899987653
Q ss_pred CCCCC-------CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 256 KGPGI-------PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 256 ~~~~~-------~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
..... ....+..-.|| ..|++|.|+++| ..|++++. +..|.|||+.++..... .....+.++-+.|
T Consensus 173 ln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dg-t~l~tAS~gsssi~iWdpdtg~~~pL----~~~glgg~slLkw 246 (445)
T KOG2139|consen 173 LNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDG-TILVTASFGSSSIMIWDPDTGQKIPL----IPKGLGGFSLLKW 246 (445)
T ss_pred cccccccccccccchhheeCCCC-ceeeEEEEcCCC-CEEeecccCcceEEEEcCCCCCcccc----cccCCCceeeEEE
Confidence 11000 11223334455 689999999999 78887765 67899999999874221 1234567899999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCC-----
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKG----- 401 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~----- 401 (812)
+|++. +|++++.|+..++|.....-+.. .- .-..+.|...+|+|.|+ +|++.+.. -++|.+.-....
T Consensus 247 SPdgd-~lfaAt~davfrlw~e~q~wt~e--rw--~lgsgrvqtacWspcGsfLLf~~sgs--p~lysl~f~~~~~~~~~ 319 (445)
T KOG2139|consen 247 SPDGD-VLFAATCDAVFRLWQENQSWTKE--RW--ILGSGRVQTACWSPCGSFLLFACSGS--PRLYSLTFDGEDSVFLR 319 (445)
T ss_pred cCCCC-EEEEecccceeeeehhcccceec--ce--eccCCceeeeeecCCCCEEEEEEcCC--ceEEEEeecCCCccccC
Confidence 99999 58888999999999665322211 11 12345899999999998 44554433 344444311000
Q ss_pred -------CceEEcc-----c----CCCCEEEEEEccCCCcEEEEEECCC--------CEEEEEcCCC
Q psy4510 402 -------SSVATFK-----H----HTAPVTTVEWHPTESSTFASGGADD--------QIALWDLAVE 444 (812)
Q Consensus 402 -------~~~~~~~-----~----h~~~v~~v~~~p~~~~~l~s~~~dg--------~v~iwd~~~~ 444 (812)
..+..+. . -.+++.+++|.|.|. +||+.-..+ .|.+||.+..
T Consensus 320 ~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGe-yLav~fKg~~~v~~~k~~i~~fdtr~s 385 (445)
T KOG2139|consen 320 PQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGE-YLAVIFKGQSFVLLCKLHISRFDTRKS 385 (445)
T ss_pred cccceeeeeeccchhhhhhcCcccccCccceeeECCCCC-EEEEEEcCCchhhhhhhhhhhhccccc
Confidence 0011111 1 146788999999985 777654432 3556776654
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.2e-13 Score=130.55 Aligned_cols=256 Identities=18% Similarity=0.285 Sum_probs=184.0
Q ss_pred CCCceEEEEeCCCCCC--eEEEecCCCcEEEEccCCCCcccc--cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe
Q psy4510 175 HLTEGFAMDWSSTEPG--VLATGDCKRNIHIWTPREAGAWQV--DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~--~lat~~~dg~v~iwd~~~~~~~~~--~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw 250 (812)
...+|..++|.- +++ .|.-++.+..+..+.+........ ........+.+|..++.. ...|++|-.+|.+.+|
T Consensus 54 ~~~ris~l~~~~-d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 54 ELDRISSLLFGV-DGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVR 130 (412)
T ss_pred hhhhhhhheeec-CCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEE
Confidence 335666666665 333 444444566677776665542111 122344556677777653 3468888899999999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC--CcEEEEeCCCCCcceecc---ccccC--CCCCEE
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK--RNIHIWTPREAGAWQVDQ---KPLVG--HTNSVE 323 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--g~i~vwd~~~~~~~~~~~---~~~~~--h~~~v~ 323 (812)
..+.+... ..++..+..+ ..+..|.-++..+.++|+|+.. ..+.+||+....+..... ....+ -.-.++
T Consensus 131 ~~k~~d~h---ss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~t 206 (412)
T KOG3881|consen 131 HDKSGDLH---SSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWIT 206 (412)
T ss_pred eccCCccc---cccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeec
Confidence 99864211 2444445443 5678888899888899999998 889999998774311100 00111 123567
Q ss_pred EEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 324 DLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 324 ~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
++.|.+. .. .||+|+.-+.||+||++. ..+++..+ .--..+++++...|.++++++|..-|.+..||+|. +
T Consensus 207 di~Fl~g~~~~-~fat~T~~hqvR~YDt~~--qRRPV~~f-d~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~---~ 279 (412)
T KOG3881|consen 207 DIRFLEGSPNY-KFATITRYHQVRLYDTRH--QRRPVAQF-DFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRG---G 279 (412)
T ss_pred cceecCCCCCc-eEEEEecceeEEEecCcc--cCcceeEe-ccccCcceeeeecCCCcEEEEecccchhheecccC---c
Confidence 8899876 44 699999999999999995 44556666 55678999999999999999999999999999994 4
Q ss_pred CceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 402 SSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 402 ~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..+.. +++-.+.|.+|..+|.. .+++++|-|+.|+|+|+.+.+
T Consensus 280 kl~g~~~kg~tGsirsih~hp~~-~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 280 KLLGCGLKGITGSIRSIHCHPTH-PVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred eeeccccCCccCCcceEEEcCCC-ceEEeeccceeEEEeecccch
Confidence 44444 88899999999999986 599999999999999999853
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.4e-15 Score=144.82 Aligned_cols=260 Identities=15% Similarity=0.198 Sum_probs=203.4
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
...-+.+.++.+|++|+.|+..|.+..+|..++ .....+. -...|..+.|-.+. .++|++- ...++|||-
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~-------~L~~Ei~-v~Etv~Dv~~LHne-q~~AVAQ-K~y~yvYD~ 198 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTK-------KLHFEIN-VMETVRDVTFLHNE-QFFAVAQ-KKYVYVYDN 198 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccc-------eeeeeee-hhhhhhhhhhhcch-HHHHhhh-hceEEEecC
Confidence 445678899999999999999999999999884 3333333 34568899998876 6677665 578999996
Q ss_pred CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE
Q psy4510 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 382 (812)
.... ...++.| ..|..+.|-|..= +|++++..|.++.-|+.++. .+..+ ....+.+..++-+|-+..+-
T Consensus 199 ~GtE-----lHClk~~-~~v~rLeFLPyHf-LL~~~~~~G~L~Y~DVS~Gk---lVa~~-~t~~G~~~vm~qNP~NaVih 267 (545)
T KOG1272|consen 199 NGTE-----LHCLKRH-IRVARLEFLPYHF-LLVAASEAGFLKYQDVSTGK---LVASI-RTGAGRTDVMKQNPYNAVIH 267 (545)
T ss_pred CCcE-----Eeehhhc-Cchhhhcccchhh-eeeecccCCceEEEeechhh---hhHHH-HccCCccchhhcCCccceEE
Confidence 5443 4445544 4689999999876 89999999999999998544 34444 45567889999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCc
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ 462 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 462 (812)
+|...|+|.+|... ...++..+..|.++|.+|++.+.| ++++|+|.|..++|||++... +
T Consensus 268 ~GhsnGtVSlWSP~---skePLvKiLcH~g~V~siAv~~~G-~YMaTtG~Dr~~kIWDlR~~~----------------q 327 (545)
T KOG1272|consen 268 LGHSNGTVSLWSPN---SKEPLVKILCHRGPVSSIAVDRGG-RYMATTGLDRKVKIWDLRNFY----------------Q 327 (545)
T ss_pred EcCCCceEEecCCC---CcchHHHHHhcCCCcceEEECCCC-cEEeecccccceeEeeecccc----------------c
Confidence 99999999999997 578888999999999999999987 799999999999999999874 2
Q ss_pred eEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCC---cccEEeecCCCCeeEEEEcCCC
Q psy4510 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLP---SQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 463 ~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
+...+. ......++++.. ++++.+..+.+.+|....... ......+...+.|..+.|.|-.
T Consensus 328 l~t~~t-p~~a~~ls~Sqk--glLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~E 391 (545)
T KOG1272|consen 328 LHTYRT-PHPASNLSLSQK--GLLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYE 391 (545)
T ss_pred cceeec-CCCccccccccc--cceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHH
Confidence 333333 345677888877 788888888999998766533 2333334445689999999973
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.8e-13 Score=127.65 Aligned_cols=333 Identities=16% Similarity=0.161 Sum_probs=219.1
Q ss_pred ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
....+.||...|++...-|..+. +++.+.|.++|||--+...... ..+...-..+++++.+.+....|++|-..|++
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~g-v~~~s~drtvrv~lkrds~q~w--psI~~~mP~~~~~~~y~~e~~~L~vg~~ngtv 92 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEG-VISVSEDRTVRVWLKRDSGQYW--PSIYHYMPSPCSAMEYVSESRRLYVGQDNGTV 92 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCC-eEEccccceeeeEEeccccccC--chhhhhCCCCceEeeeeccceEEEEEEecceE
Confidence 56778899999999999888885 8999999999999776433222 22223446789999999999999999999999
Q ss_pred EEEecCC-CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC-CCchhHHHhhhhhccCCCceEEeec
Q psy4510 391 HVWDLRR-FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV-ERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 391 ~iwd~~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
.-+.+.. +.....++....|...|..+-|+-.- ..+++.+.|..+ .|-... +... . ...+...
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~-e~V~s~~~dk~~-~~hc~e~~~~l---------g----~Y~~~~~ 157 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTH-EWVLSTGKDKQF-AWHCTESGNRL---------G----GYNFETP 157 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCc-eeEEEeccccce-EEEeeccCCcc---------c----ceEeecc
Confidence 9987753 22345666778899999999998764 588888888765 444332 2110 0 0000000
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN 548 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 548 (812)
+......+. ..+...+.++|+.+.+-++.
T Consensus 158 -----------~t~~~~d~~------------------~~fvGd~~gqvt~lr~~~~~---------------------- 186 (404)
T KOG1409|consen 158 -----------ASALQFDAL------------------YAFVGDHSGQITMLKLEQNG---------------------- 186 (404)
T ss_pred -----------CCCCceeeE------------------EEEecccccceEEEEEeecC----------------------
Confidence 000000000 11122233455555554442
Q ss_pred CcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCc
Q psy4510 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDP 628 (812)
Q Consensus 549 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~ 628 (812)
..+...+.+|.+.+++++|.+....|+++ ..|..|.+||+....-
T Consensus 187 ----------------------------~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg--~~d~~vi~wdigg~~g----- 231 (404)
T KOG1409|consen 187 ----------------------------CQLITTFNGHTGEVTCLKWDPGQRLLFSG--ASDHSVIMWDIGGRKG----- 231 (404)
T ss_pred ----------------------------CceEEEEcCcccceEEEEEcCCCcEEEec--cccCceEEEeccCCcc-----
Confidence 23355678999999999999999999998 8999999999987652
Q ss_pred ccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC-------------------
Q psy4510 629 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA------------------- 689 (812)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~------------------- 689 (812)
....+.+|...|..+...+ -.+.|.+++.||.|.+|+....
T Consensus 232 -------------------~~~el~gh~~kV~~l~~~~-~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qp 291 (404)
T KOG1409|consen 232 -------------------TAYELQGHNDKVQALSYAQ-HTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQP 291 (404)
T ss_pred -------------------eeeeeccchhhhhhhhhhh-hheeeeeccCCCeEEEEeccceeecCccccccchhhhhCch
Confidence 4567899999999999988 6789999999999999999751
Q ss_pred -------------------------ceeEEEEecCCCCEEEeecCCCeEEEeecCCCC--C-cccccccccCCCcceeEe
Q psy4510 690 -------------------------GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAG--A-WQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 690 -------------------------~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~--~-~~~~~~~~~gH~~~V~~l 741 (812)
+.+...+-+....+ .+-+..-.+|+-+.-... . -++.+..+..-...|+++
T Consensus 292 ffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~-p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItam 370 (404)
T KOG1409|consen 292 FFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSY-PTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAM 370 (404)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCcccc-ccccceeEEEEecccchhhhcCCCCccccccccccceeEE
Confidence 11111111111111 111122233333311000 0 001233332222468999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.+-.+-. +|+|+|.|+.|+|||+++--
T Consensus 371 hlqetlg-lLvTsG~~Rvi~iwd~~~v~ 397 (404)
T KOG1409|consen 371 HLQETLG-LLVTSGTDRVIKIWDVRSVC 397 (404)
T ss_pred Ehhhhcc-ceeecCCceEEEEEechhhh
Confidence 8887777 89999999999999998754
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-11 Score=118.93 Aligned_cols=236 Identities=14% Similarity=0.195 Sum_probs=166.6
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee--CCCceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD--DPFQLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~ 254 (812)
..+..+.|+. +...|..|+.|| -++|+.+.-.+ ..........|.-+-|+. .++|..+ ..+.+++.+.+.
T Consensus 6 ~ti~~~~~Nq-d~~~lsvGs~~G-yk~~~~~~~~k----~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk 77 (391)
T KOG2110|consen 6 PTINFIGFNQ-DSTLLSVGSKDG-YKIFSCSPFEK----CFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKK 77 (391)
T ss_pred cceeeeeecc-ceeEEEccCCCc-eeEEecCchHH----hhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEccc
Confidence 3456666888 999999999987 67887765432 111112223455555653 4555554 345588888876
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc---cCCCCCEEEEEEcCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---VGHTNSVEDLQWSPGE 331 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~ 331 (812)
+ ..+..+. -..+|.++.++.+ +|+++-. ..|+|||++..+ ...++ ..+...+.++.+++.+
T Consensus 78 ~-------~~ICe~~-fpt~IL~VrmNr~---RLvV~Le-e~IyIydI~~Mk----lLhTI~t~~~n~~gl~AlS~n~~n 141 (391)
T KOG2110|consen 78 K-------TTICEIF-FPTSILAVRMNRK---RLVVCLE-ESIYIYDIKDMK----LLHTIETTPPNPKGLCALSPNNAN 141 (391)
T ss_pred C-------ceEEEEe-cCCceEEEEEccc---eEEEEEc-ccEEEEecccce----eehhhhccCCCccceEeeccCCCC
Confidence 4 2222222 2467899999874 5666655 449999999886 33333 2355567777777766
Q ss_pred CeEEEE-E-ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc-EEEEecCCCCCCCceEEcc
Q psy4510 332 KRVLAS-C-SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC-IHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 332 ~~~l~s-~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-i~iwd~~~~~~~~~~~~~~ 408 (812)
.+ +|- + ...|.|.+||+.+ ...+..+ .+|.+.+.+++|+++|.+|||++..|+ |||+.+. .++.+..|+
T Consensus 142 ~y-lAyp~s~t~GdV~l~d~~n---l~~v~~I-~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~---~G~kl~eFR 213 (391)
T KOG2110|consen 142 CY-LAYPGSTTSGDVVLFDTIN---LQPVNTI-NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVP---EGQKLYEFR 213 (391)
T ss_pred ce-EEecCCCCCceEEEEEccc---ceeeeEE-EecCCceeEEEECCCCCEEEEeccCceEEEEEEcC---CccEeeeee
Confidence 64 443 2 2368999999984 4455666 699999999999999999999999987 6899997 577888886
Q ss_pred cCC--CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 409 HHT--APVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 409 ~h~--~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
... ..|.+++|+|+. .+|++.|..++|.++.+....
T Consensus 214 RG~~~~~IySL~Fs~ds-~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 214 RGTYPVSIYSLSFSPDS-QFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred CCceeeEEEEEEECCCC-CeEEEecCCCeEEEEEecccc
Confidence 443 357899999996 699999999999999997654
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=129.63 Aligned_cols=264 Identities=15% Similarity=0.212 Sum_probs=184.3
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-ccccccccCCCC------------CCeeeeeEcCCCC--cEE
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLGGHT------------NSAEDLQWSDLKT--ALQ 239 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-~~~~~~~l~~h~------------~~V~~l~~s~~~~--~l~ 239 (812)
..+-|.++.|.. .|.+||||..+|.|.+|.-..... .......++.|. ..|..+.|.+++. .++
T Consensus 24 eadiis~vef~~-~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 24 EADIISAVEFDH-YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred hhcceeeEEeec-ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 457799999999 999999999999999996554332 122233444553 4788999998875 456
Q ss_pred EeeCCCceEEeeCCCCCCCC------------------C----------CCCCceEE-cCCCCcEEEEEecCCCCCEEEE
Q psy4510 240 TVDDPFQLAEHNKKRGKGPG------------------I----------PTPPLFSF-SGHLTEGFAMDWSSTEPGVLAT 290 (812)
Q Consensus 240 s~~~d~~i~vwd~~~~~~~~------------------~----------~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~s 290 (812)
....|.+|++|.+....... . ...|.+.+ .+|.--|.++.++.+. ..+++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~-Et~lS 181 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDK-ETFLS 181 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCcc-ceEee
Confidence 67789999999986542111 0 00111111 3577789999999998 56777
Q ss_pred EeCCCcEEEEeCCCCCcce----eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc---cceee---
Q psy4510 291 GDCKRNIHIWTPREAGAWQ----VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK---SCMLT--- 360 (812)
Q Consensus 291 g~~dg~i~vwd~~~~~~~~----~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~--- 360 (812)
++ |=.|.+|++.-..... +....+..-+..|++..|+|...++|+-.+..|+|++.|+|....- ..+..
T Consensus 182 AD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepe 260 (433)
T KOG1354|consen 182 AD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPE 260 (433)
T ss_pred cc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhcccc
Confidence 65 6789999987654311 1122233344578999999999889999999999999999942110 00111
Q ss_pred ------cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC------------CE---EEEEE
Q psy4510 361 ------LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA------------PV---TTVEW 419 (812)
Q Consensus 361 ------~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~------------~v---~~v~~ 419 (812)
+...--..|..+.|++.|+++++-.. -+|++||+.. ..+++.+++-|.. .| ..++|
T Consensus 261 dp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nm--e~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~ 337 (433)
T KOG1354|consen 261 DPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNM--EAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSW 337 (433)
T ss_pred CCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccc--cCCcceEEeehHhHHHHHHHHhhccchhheeEEEE
Confidence 11112346888999999999998654 5899999965 5677877776632 22 46889
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+.++ .++++|+..+.++++++..+.
T Consensus 338 sg~~-~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 338 SGND-SYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred cCCc-ceEecccccceEEEecCCCCc
Confidence 9876 699999999999999976553
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.4e-13 Score=135.21 Aligned_cols=251 Identities=19% Similarity=0.244 Sum_probs=170.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-----cCCCCcEEEeeCCCceEEeeCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-----SDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-----s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
++...++- .|++|+-.-. ..+++|+...+......+....-....-.|-+| .+.+--|+.+-..|.+.+.+..
T Consensus 126 ~~~~~~~~-~gd~lcFnvg-~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~ 203 (636)
T KOG2394|consen 126 VTNTNQSG-KGDRLCFNVG-RELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI 203 (636)
T ss_pred eeeccccC-CCCEEEEecC-CeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecch
Confidence 33444444 5555554432 368899887543321122111111122233333 3566678888888888888765
Q ss_pred CCCCCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC--------------ccee-------
Q psy4510 254 RGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--------------AWQV------- 310 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~------- 310 (812)
.. +...++.... .+..|+++.|-|.++.+++.+-.+|.+.++|..-.. ...+
T Consensus 204 ~~-----~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~ 278 (636)
T KOG2394|consen 204 NF-----EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKK 278 (636)
T ss_pred hh-----HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccc
Confidence 52 1122222222 236899999999888899999999999999753210 0000
Q ss_pred ---ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 311 ---DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 311 ---~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
+...+.-..+.|+..+|+|+|+ .||+.+.||.+||||..+... ..+....-+...|++|+|||++|++|+.|
T Consensus 279 ~rNPv~~w~~~~g~in~f~FS~DG~-~LA~VSqDGfLRvF~fdt~eL----lg~mkSYFGGLLCvcWSPDGKyIvtGGED 353 (636)
T KOG2394|consen 279 TRNPVARWHIGEGSINEFAFSPDGK-YLATVSQDGFLRIFDFDTQEL----LGVMKSYFGGLLCVCWSPDGKYIVTGGED 353 (636)
T ss_pred cCCccceeEeccccccceeEcCCCc-eEEEEecCceEEEeeccHHHH----HHHHHhhccceEEEEEcCCccEEEecCCc
Confidence 1111222355889999999999 599999999999999984332 22223445789999999999999999999
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC---------------------------------------------
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT--------------------------------------------- 422 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~--------------------------------------------- 422 (812)
-.|.||.+. ..+.+..-++|+..|..|+|.|-
T Consensus 354 DLVtVwSf~---erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~ 430 (636)
T KOG2394|consen 354 DLVTVWSFE---ERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRI 430 (636)
T ss_pred ceEEEEEec---cceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccc
Confidence 999999998 57888999999999999999831
Q ss_pred --CCcEEEEEECCCCEEEEEcCCC
Q psy4510 423 --ESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 423 --~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
-...|.+.+.|-++.+||+...
T Consensus 431 ~~v~YRfGSVGqDTqlcLWDlteD 454 (636)
T KOG2394|consen 431 NSVTYRFGSVGQDTQLCLWDLTED 454 (636)
T ss_pred cceEEEeecccccceEEEEecchh
Confidence 0135778889999999999765
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-12 Score=134.37 Aligned_cols=499 Identities=13% Similarity=0.128 Sum_probs=276.7
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC------------CcEEEeeCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK------------TALQTVDDPF 245 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~------------~~l~s~~~d~ 245 (812)
.-.++.|+| +.+||-|+.. .|.+-|..+.+ .++.+..|...|+.+.|.|.. -.||+++..|
T Consensus 17 N~~A~Dw~~--~GLiAygshs-lV~VVDs~s~q----~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~G 89 (1062)
T KOG1912|consen 17 NRNAADWSP--SGLIAYGSHS-LVSVVDSRSLQ----LIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISG 89 (1062)
T ss_pred cccccccCc--cceEEEecCc-eEEEEehhhhh----hhhccccCccceeEEEeccCCCchhccCccccceeEEeccccC
Confidence 356788988 5688888764 78888887766 678889999999999998742 2567888899
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC---CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.|.+||...+ ..+.-+..|.+.+..++|-+. ...+|+.-....+|.+|+..+++. .-.........
T Consensus 90 rIil~d~~~~-------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k----~Wk~~ys~~iL 158 (1062)
T KOG1912|consen 90 RIILVDFVLA-------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEK----FWKYDYSHEIL 158 (1062)
T ss_pred cEEEEEehhh-------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCce----eeccccCCcce
Confidence 9999999875 555667788889999998763 224566666678999999999873 33333344567
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCc---ccceeecCCcCCC------------C-------------eEEEEE
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINT---KSCMLTLPNAHTS------------D-------------VNVISW 374 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~------------~-------------v~~l~~ 374 (812)
.|+.+.|-...-|..-+..|.+.+-+.-.... ......+...|.. . .-.++|
T Consensus 159 s~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf 238 (1062)
T KOG1912|consen 159 SCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAF 238 (1062)
T ss_pred eeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhc
Confidence 78899886655565556667777665432111 0011111122211 0 112467
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc-EEEEEECCCCEEEEEcCCCCchhHHHhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS-TFASGGADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
+|.-+-++-......+.|+|+. -..++....-..+.+.=+.|-|+..+ .|.+.-.||.+.+|-.+...........
T Consensus 239 ~p~~rn~lfi~~prellv~dle---~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~ 315 (1062)
T KOG1912|consen 239 SPHWRNILFITFPRELLVFDLE---YECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNA 315 (1062)
T ss_pred ChhhhceEEEEeccceEEEcch---hhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccch
Confidence 7876533334456679999997 45677777666777777888887533 6778888999999987654221100000
Q ss_pred hhhccCCCceEEeecCC-CceeEEEEcCCCCCEEEEE-eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 454 AELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTIIST-ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
.-..+...|+-...... ..+....-.|..+..++.. +.+...+|. +...............-+..+.|+-. ...+
T Consensus 316 ~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~-l~~~ri~~~~~s~~iel~~pf~f~~~--~~~v 392 (1062)
T KOG1912|consen 316 SLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQ-LSNGRIHLDYRSSSIELVLPFDFNLS--TKLV 392 (1062)
T ss_pred hhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHh-hhcCCcCcccccccccccccccccCc--eeeh
Confidence 00001111111111111 1222223334333322222 222223332 22111111111000011111111111 0000
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC-------eEEE
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS-------TTLA 604 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~-------~l~~ 604 (812)
+.. ....++. ++ +...+...+...+... .+-....|.|+ .+++
T Consensus 393 --~k~-----~l~~LS~------dg--------~h~sGs~~~~~~p~p~---------~t~~~~~p~~n~~~~~~pLvAv 442 (1062)
T KOG1912|consen 393 --GKT-----SLISLSD------DG--------SHSSGSTCVRMRPMPE---------LTKVENDPGGNTPAGTVPLVAV 442 (1062)
T ss_pred --hhc-----cccchhh------cC--------CCCCCceeeecccCcc---------cceeecCCCCCccceeeeeEEe
Confidence 000 0000000 00 0000000000000000 00011112222 2444
Q ss_pred EeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEE
Q psy4510 605 GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684 (812)
Q Consensus 605 ~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iW 684 (812)
| ...|+|.++|+.++. ....+.-|++.|.++.|-. ...|+|.+....
T Consensus 443 G--T~sGTV~vvdvst~~-------------------------v~~~fsvht~~VkgleW~g--~sslvSfsys~~---- 489 (1062)
T KOG1912|consen 443 G--TNSGTVDVVDVSTNA-------------------------VAASFSVHTSLVKGLEWLG--NSSLVSFSYSHV---- 489 (1062)
T ss_pred e--cCCceEEEEEecchh-------------------------hhhhhcccccceeeeeecc--ceeEEEeeeccc----
Confidence 5 899999999999986 5667888999999999976 235666554311
Q ss_pred ecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccc-cCCCcceeEeEEecCCceeEEeeccCCceEEe
Q psy4510 685 TPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763 (812)
Q Consensus 685 d~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iW 763 (812)
.=++|.--..+.|-|+++|... ..+.+ .....+|+.|..|..|+ ||+-.-.|.-+.||
T Consensus 490 ------------------n~~sg~vrN~l~vtdLrtGlsk--~fR~l~~~despI~~irvS~~~~-yLai~Fr~~plEiw 548 (1062)
T KOG1912|consen 490 ------------------NSASGGVRNDLVVTDLRTGLSK--RFRGLQKPDESPIRAIRVSSSGR-YLAILFRREPLEIW 548 (1062)
T ss_pred ------------------cccccceeeeEEEEEccccccc--ccccCCCCCcCcceeeeecccCc-eEEEEecccchHHH
Confidence 1123444456778888888531 11112 22346899999999999 89999999999999
Q ss_pred eecCcceEEEE--e-eeeeEEEee
Q psy4510 764 ARRDMLYCFFV--S-LVHCIFVWL 784 (812)
Q Consensus 764 d~~~~~~~~~~--~-~~~~~~~w~ 784 (812)
|++....-++. + -..+.+.|.
T Consensus 549 d~kt~~~lr~mS~a~P~it~leWs 572 (1062)
T KOG1912|consen 549 DLKTLRMLRLMSLALPLITVLEWS 572 (1062)
T ss_pred hhccchHHHHHhhcCCcEEEEeec
Confidence 99776522222 1 224666775
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=136.08 Aligned_cols=76 Identities=20% Similarity=0.268 Sum_probs=65.9
Q ss_pred ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCC
Q psy4510 588 GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 667 (812)
Q Consensus 588 ~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~ 667 (812)
+.|+..+|+|||++|++. +.||.+||++..+.+ ++..++..-+..+|++|||
T Consensus 291 g~in~f~FS~DG~~LA~V--SqDGfLRvF~fdt~e-------------------------Llg~mkSYFGGLLCvcWSP- 342 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATV--SQDGFLRIFDFDTQE-------------------------LLGVMKSYFGGLLCVCWSP- 342 (636)
T ss_pred ccccceeEcCCCceEEEE--ecCceEEEeeccHHH-------------------------HHHHHHhhccceEEEEEcC-
Confidence 378899999999999998 999999999999886 5566666668999999999
Q ss_pred CCCeEEecCCCceEEEEecCCCce
Q psy4510 668 EPGVLATGDCKRNIHIWTPREAGA 691 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~~~~ 691 (812)
|+++|++|+.|-.|.||.+..+++
T Consensus 343 DGKyIvtGGEDDLVtVwSf~erRV 366 (636)
T KOG2394|consen 343 DGKYIVTGGEDDLVTVWSFEERRV 366 (636)
T ss_pred CccEEEecCCcceEEEEEeccceE
Confidence 899999999999999999865443
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-11 Score=134.98 Aligned_cols=193 Identities=15% Similarity=0.184 Sum_probs=150.4
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCC----CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN----SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~----~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
..+.. ....++.++.+..+.|||...+.. ......-.. ...-+-++++.-++++|+.-+.|.+|.....
T Consensus 93 ~~l~~-e~k~i~l~~~~ns~~i~d~~~~~~----~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d-- 165 (967)
T KOG0974|consen 93 AKLFE-ENKKIALVTSRNSLLIRDSKNSSV----LSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED-- 165 (967)
T ss_pred cchhh-hcceEEEEEcCceEEEEecccCce----ehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc--
Confidence 44455 677788877788999999877642 222221111 1223345677779999999999999998842
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
..+. .+.||.+.|+++.|+-+| .++++.+.|+++++|++.+.+. ......+|+..|..++|.|+ .+++
T Consensus 166 ----n~p~-~l~GHeG~iF~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~---~~~~~fgHsaRvw~~~~~~n---~i~t 233 (967)
T KOG0974|consen 166 ----NKPI-RLKGHEGSIFSIVTSLDG-RYIASVSDDRSIRLWPIDSREV---LGCTGFGHSARVWACCFLPN---RIIT 233 (967)
T ss_pred ----CCcc-eecccCCceEEEEEccCC-cEEEEEecCcceeeeecccccc---cCcccccccceeEEEEeccc---eeEE
Confidence 3444 789999999999999999 8999999999999999999873 33467889999999999998 4999
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
++.|.+.++|+... ..+..+.......+..++..+....++|++.||.+++|++..
T Consensus 234 ~gedctcrvW~~~~----~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 234 VGEDCTCRVWGVNG----TQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eccceEEEEEeccc----ceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 99999999997652 223344233356799999999888999999999999999864
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-11 Score=113.83 Aligned_cols=239 Identities=13% Similarity=0.151 Sum_probs=158.3
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-C------CCceEEee
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-D------PFQLAEHN 251 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~------d~~i~vwd 251 (812)
...++|+. |..-+++|..+| .+||+++.-+. ......+.+.+.-+...-..++|+-.+ . ...+.|||
T Consensus 8 ~lsvs~NQ-D~ScFava~~~G-friyn~~P~ke----~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWD 81 (346)
T KOG2111|consen 8 TLSVSFNQ-DHSCFAVATDTG-FRIYNCDPFKE----SASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWD 81 (346)
T ss_pred eeEEEEcc-CCceEEEEecCc-eEEEecCchhh----hhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEe
Confidence 44589988 999999998776 89998876432 111122222222111112234554333 2 24699999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC--CCCEEEEEEcC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH--TNSVEDLQWSP 329 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h--~~~v~~~~~~p 329 (812)
-.. .+++..+. -..+|.++.+.++ +|++.- .+.|.||.....-+ ..+.+... .....+++-+.
T Consensus 82 D~k-------~~~i~el~-f~~~I~~V~l~r~---riVvvl-~~~I~VytF~~n~k---~l~~~et~~NPkGlC~~~~~~ 146 (346)
T KOG2111|consen 82 DLK-------ERCIIELS-FNSEIKAVKLRRD---RIVVVL-ENKIYVYTFPDNPK---LLHVIETRSNPKGLCSLCPTS 146 (346)
T ss_pred ccc-------CcEEEEEE-eccceeeEEEcCC---eEEEEe-cCeEEEEEcCCChh---heeeeecccCCCceEeecCCC
Confidence 433 36666665 4678999999985 455544 47899999875432 22222111 11233332222
Q ss_pred CCCeEEEE-EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc-EEEEecCCCCCCCceEEc
Q psy4510 330 GEKRVLAS-CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC-IHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 330 ~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-i~iwd~~~~~~~~~~~~~ 407 (812)
+ ..+||. |-.-|.|+|-|+...... ....+ .+|.+.|.|++.+.+|.++||++..|+ |||||.. .+..+..+
T Consensus 147 ~-k~~LafPg~k~GqvQi~dL~~~~~~-~p~~I-~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~---~g~~l~E~ 220 (346)
T KOG2111|consen 147 N-KSLLAFPGFKTGQVQIVDLASTKPN-APSII-NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTE---DGTLLQEL 220 (346)
T ss_pred C-ceEEEcCCCccceEEEEEhhhcCcC-CceEE-EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcC---CCcEeeee
Confidence 2 224443 334689999999854332 22334 799999999999999999999999997 7999998 57777777
Q ss_pred ccC--CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 408 KHH--TAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 408 ~~h--~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+.. ...|.+|+|+|+. .+|+++|..|+|.|+.++...
T Consensus 221 RRG~d~A~iy~iaFSp~~-s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 221 RRGVDRADIYCIAFSPNS-SWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred ecCCchheEEEEEeCCCc-cEEEEEcCCCeEEEEEeecCC
Confidence 543 4679999999986 699999999999999998754
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-12 Score=137.77 Aligned_cols=237 Identities=12% Similarity=0.079 Sum_probs=148.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee---CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD---DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v 275 (812)
..|.+||..... .+.+..+...+.+.+|||||+.|+..+ ....+.+|++.++ ..+.+..+.++ +
T Consensus 179 ~~l~~~d~dg~~-----~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G-----~~~~l~~~~~~---~ 245 (429)
T PRK03629 179 YELRVSDYDGYN-----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG-----AVRQVASFPRH---N 245 (429)
T ss_pred eeEEEEcCCCCC-----CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCC-----CeEEccCCCCC---c
Confidence 468888887654 234455677899999999999998764 2456899998875 22333333333 4
Q ss_pred EEEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE--ECCC
Q psy4510 276 FAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW--DTRV 351 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw--d~~~ 351 (812)
..++|+|+|..++++.+.+| .|++||+.++. ...+..+...+....|+|+++.++++...++...|| |+..
T Consensus 246 ~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-----~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~ 320 (429)
T PRK03629 246 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING 320 (429)
T ss_pred CCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-----EEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence 46899999954444555555 48889998765 233444455678899999999654444445555555 5543
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
+. ...+ ..+........|+|+|++|+..+.+ ..|.+||+.. +. ...+... .......|+|+| ..|+
T Consensus 321 g~----~~~l-t~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~---g~-~~~Lt~~-~~~~~p~~SpDG-~~i~ 389 (429)
T PRK03629 321 GA----PQRI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT---GG-VQVLTDT-FLDETPSIAPNG-TMVI 389 (429)
T ss_pred CC----eEEe-ecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCC---CC-eEEeCCC-CCCCCceECCCC-CEEE
Confidence 21 2222 2233445678999999977765543 3588889863 22 3333321 223467899998 4676
Q ss_pred EEECCCC---EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 429 SGGADDQ---IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 429 s~~~dg~---v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.++.++. +.++++.... ......+...+...+|+|-
T Consensus 390 ~~s~~~~~~~l~~~~~~G~~-----------------~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 390 YSSSQGMGSVLNLVSTDGRF-----------------KARLPATDGQVKFPAWSPY 428 (429)
T ss_pred EEEcCCCceEEEEEECCCCC-----------------eEECccCCCCcCCcccCCC
Confidence 6666654 6677775442 1112223446777888873
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.3e-12 Score=122.75 Aligned_cols=243 Identities=12% Similarity=0.113 Sum_probs=159.2
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..+..+.|+.+. ..|..|+.|| .+++...... .+.........|.++-|+.. +++..+.
T Consensus 6 ~ti~~~~~Nqd~-~~lsvGs~~G-yk~~~~~~~~----------------k~~~~~~~~~~IvEmLFSSS---LvaiV~~ 64 (391)
T KOG2110|consen 6 PTINFIGFNQDS-TLLSVGSKDG-YKIFSCSPFE----------------KCFSKDTEGVSIVEMLFSSS---LVAIVSI 64 (391)
T ss_pred cceeeeeeccce-eEEEccCCCc-eeEEecCchH----------------HhhcccCCCeEEEEeecccc---eeEEEec
Confidence 345666788774 5778888887 7888876542 11111122235777778775 4444433
Q ss_pred CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCc
Q psy4510 492 SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDE 571 (812)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 571 (812)
+.-+..+.........+....-...|.++.++.+ .+++..... +.++..-.+.-+.+
T Consensus 65 ~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr~--RLvV~Lee~-IyIydI~~MklLhT-------------------- 121 (391)
T KOG2110|consen 65 KQPRKLKVVHFKKKTTICEIFFPTSILAVRMNRK--RLVVCLEES-IYIYDIKDMKLLHT-------------------- 121 (391)
T ss_pred CCCceEEEEEcccCceEEEEecCCceEEEEEccc--eEEEEEccc-EEEEecccceeehh--------------------
Confidence 3334455455444555555555567888888776 444444433 33332222221111
Q ss_pred cccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeee
Q psy4510 572 DRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 651 (812)
Q Consensus 572 ~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (812)
.....++..++.++.+++.+.+++.-.....|.|.|||+.+.+ +...
T Consensus 122 --------I~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~-------------------------~v~~ 168 (391)
T KOG2110|consen 122 --------IETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ-------------------------PVNT 168 (391)
T ss_pred --------hhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce-------------------------eeeE
Confidence 1123345556777777777778887644568999999999876 7788
Q ss_pred ecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccc
Q psy4510 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL 731 (812)
Q Consensus 652 ~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~ 731 (812)
+.+|.+.+-+++|++ +|.+|||||..|+| |||+.+.+|.. +..|
T Consensus 169 I~aH~~~lAalafs~-~G~llATASeKGTV-------------------------------IRVf~v~~G~k----l~eF 212 (391)
T KOG2110|consen 169 INAHKGPLAALAFSP-DGTLLATASEKGTV-------------------------------IRVFSVPEGQK----LYEF 212 (391)
T ss_pred EEecCCceeEEEECC-CCCEEEEeccCceE-------------------------------EEEEEcCCccE----eeee
Confidence 999999999999999 88899999998876 56666666653 2222
Q ss_pred cCC--CcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 732 VGH--TNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 732 ~gH--~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
..- -..|.+|+|+||++ +|++.|.-++|.|+.+...
T Consensus 213 RRG~~~~~IySL~Fs~ds~-~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 213 RRGTYPVSIYSLSFSPDSQ-FLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eCCceeeEEEEEEECCCCC-eEEEecCCCeEEEEEeccc
Confidence 221 24688999999999 8999999999999998654
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.8e-12 Score=132.36 Aligned_cols=413 Identities=13% Similarity=0.122 Sum_probs=237.5
Q ss_pred CCCccCcCCCCCceEEEEeCCC-----------CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSST-----------EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD- 233 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~-----------~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~- 233 (812)
.+.|....-|...|+.+.|.|. ..-+||++...|.|.|||..... .+..+..|..+|..++|-+
T Consensus 45 ~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s----~~~~l~~~~~~~qdl~W~~~ 120 (1062)
T KOG1912|consen 45 LQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLAS----VINWLSHSNDSVQDLCWVPA 120 (1062)
T ss_pred hhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhh----hhhhhcCCCcchhheeeeec
Confidence 3445555457788999999883 12368899999999999998876 5667888999999999965
Q ss_pred --CC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee
Q psy4510 234 --LK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310 (812)
Q Consensus 234 --~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 310 (812)
+. ..|++......+.+|+..+| ..+.....-.....|+.+.|-....+..-+..|.+.+-+.-.......
T Consensus 121 rd~Srd~LlaIh~ss~lvLwntdtG-------~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~ 193 (1062)
T KOG1912|consen 121 RDDSRDVLLAIHGSSTLVLWNTDTG-------EKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDV 193 (1062)
T ss_pred cCcchheeEEecCCcEEEEEEccCC-------ceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCC
Confidence 34 46778888899999999987 455555444455677888887666666666667777665432221111
Q ss_pred ccc---cccCCCC-------------------------CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC
Q psy4510 311 DQK---PLVGHTN-------------------------SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 311 ~~~---~~~~h~~-------------------------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 362 (812)
..+ .-..|.. ....++|+|.-++++ -......+.++|++- ..++..+
T Consensus 194 pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~l-fi~~prellv~dle~---~~~l~vv- 268 (1062)
T KOG1912|consen 194 PGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNIL-FITFPRELLVFDLEY---ECCLAVV- 268 (1062)
T ss_pred CceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceE-EEEeccceEEEcchh---hceeEEE-
Confidence 100 0011111 012356788877644 344568899999983 3444444
Q ss_pred CcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCC--CCceEEccc------------CCCCEEEEEEccCCCcE
Q psy4510 363 NAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKK--GSSVATFKH------------HTAPVTTVEWHPTESST 426 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~------------h~~~v~~v~~~p~~~~~ 426 (812)
.-..+.+.-+.+-|+++ .|+++..||.+.+|-.+...+ ..+...+.. ..-.+......|..+..
T Consensus 269 pier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa 348 (1062)
T KOG1912|consen 269 PIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSA 348 (1062)
T ss_pred EeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhh
Confidence 34456667788888875 899999999999997764111 011111110 01112233345554455
Q ss_pred EEEEECCCCEEEEEcCCCCchhHHHh-------hhhhccCCC---ceEE-----eecCCCceeEEEEcC-----------
Q psy4510 427 FASGGADDQIALWDLAVERDSEIEQR-------EAELKDLPS---QLLF-----IHLGQKEIKELHWHP----------- 480 (812)
Q Consensus 427 l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~~~~---~~~~-----~~~~~~~v~~~~~~p----------- 480 (812)
++.--.+|.+.+|.+..++....... +......+. +..+ ...+.........+|
T Consensus 349 ~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p 428 (1062)
T KOG1912|consen 349 LAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDP 428 (1062)
T ss_pred hhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCC
Confidence 55556678899999986542211000 000000000 0000 000011112211111
Q ss_pred CC-------CCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCce-----EEEEeeccc
Q psy4510 481 QL-------PGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN-----IFRTISMSN 548 (812)
Q Consensus 481 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~-----~~~~~~~~~ 548 (812)
.+ |.+.+++..+.+.+++.....-...+.. +...|.++.|-.. ..+++.+....+ ....+.+..
T Consensus 429 ~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsv--ht~~VkgleW~g~--sslvSfsys~~n~~sg~vrN~l~vtd 504 (1062)
T KOG1912|consen 429 GGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSV--HTSLVKGLEWLGN--SSLVSFSYSHVNSASGGVRNDLVVTD 504 (1062)
T ss_pred CCCccceeeeeEEeecCCceEEEEEecchhhhhhhcc--cccceeeeeeccc--eeEEEeeeccccccccceeeeEEEEE
Confidence 11 1233334445566666655444333333 3457888888877 555554433221 122333344
Q ss_pred CcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 549 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
+.++...+-+.+ ......+|..+..|.-|++++.. -.+.-+.+||+++..
T Consensus 505 LrtGlsk~fR~l----------------------~~~despI~~irvS~~~~yLai~--Fr~~plEiwd~kt~~ 554 (1062)
T KOG1912|consen 505 LRTGLSKRFRGL----------------------QKPDESPIRAIRVSSSGRYLAIL--FRREPLEIWDLKTLR 554 (1062)
T ss_pred cccccccccccC----------------------CCCCcCcceeeeecccCceEEEE--ecccchHHHhhccch
Confidence 444443322211 12234589999999999999998 788999999997653
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.1e-12 Score=137.93 Aligned_cols=218 Identities=12% Similarity=0.065 Sum_probs=146.0
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC---CCceEEeeCCCCCCCCCCCCCceEEcCCCCcE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD---PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v 275 (812)
..|.++|..... .+.+..|...+.+.+|+|||+.|+..+. +..|.+|++.++ . ...+..+.+.+
T Consensus 182 ~~l~~~d~dg~~-----~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g-------~-~~~l~~~~g~~ 248 (435)
T PRK05137 182 KRLAIMDQDGAN-----VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETG-------Q-RELVGNFPGMT 248 (435)
T ss_pred eEEEEECCCCCC-----cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCC-------c-EEEeecCCCcc
Confidence 478888876543 3556678889999999999999988763 467999999875 2 23455566677
Q ss_pred EEEEecCCCCCEEEEEeCCCc--EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEECCC
Q psy4510 276 FAMDWSSTEPGVLATGDCKRN--IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWDTRV 351 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~ 351 (812)
.+.+|+|+|..++++.+.++. |++||+.++. ...+..+.......+|+|+++.++++...+| .|.++|+..
T Consensus 249 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-----~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g 323 (435)
T PRK05137 249 FAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-----TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG 323 (435)
T ss_pred cCcEECCCCCEEEEEEecCCCceEEEEECCCCc-----eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCC
Confidence 899999999555567666665 7777887664 3445556666778999999996554443444 577778763
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
.. ...+ ..+...+....|+|+|+.|+....+ ..|.+||+.. .....+. ....+..+.|+|++..+++
T Consensus 324 ~~----~~~l-t~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~----~~~~~lt-~~~~~~~p~~spDG~~i~~ 393 (435)
T PRK05137 324 SN----PRRI-SFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDG----SGERILT-SGFLVEGPTWAPNGRVIMF 393 (435)
T ss_pred CC----eEEe-ecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCC----CceEecc-CCCCCCCCeECCCCCEEEE
Confidence 22 2222 2234556778999999987766543 3577888742 2223332 2235678899999854444
Q ss_pred EEECCC-----CEEEEEcCCC
Q psy4510 429 SGGADD-----QIALWDLAVE 444 (812)
Q Consensus 429 s~~~dg-----~v~iwd~~~~ 444 (812)
++...+ .+.++|+...
T Consensus 394 ~~~~~~~~~~~~L~~~dl~g~ 414 (435)
T PRK05137 394 FRQTPGSGGAPKLYTVDLTGR 414 (435)
T ss_pred EEccCCCCCcceEEEEECCCC
Confidence 444332 4777777654
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5e-09 Score=121.35 Aligned_cols=414 Identities=14% Similarity=0.183 Sum_probs=237.1
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEe----eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEH----NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw----d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
...+.|.++.+-++...|+.+..+|.|.+. +... ..+-..-.-...|.+++||||+ .+|+....+++
T Consensus 73 ~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~--------~~~E~VG~vd~GI~a~~WSPD~-Ella~vT~~~~ 143 (928)
T PF04762_consen 73 DPNDKIVSFQYLADSESLCIALASGDIILVREDPDPDE--------DEIEIVGSVDSGILAASWSPDE-ELLALVTGEGN 143 (928)
T ss_pred CCCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCC--------ceeEEEEEEcCcEEEEEECCCc-CEEEEEeCCCE
Confidence 345789999999999999999999999998 4443 2222223335789999999999 68887777888
Q ss_pred EEEEeCC------------C-CCc------ceecccc-------------------------ccCCCCCEEEEEEcCCCC
Q psy4510 297 IHIWTPR------------E-AGA------WQVDQKP-------------------------LVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 297 i~vwd~~------------~-~~~------~~~~~~~-------------------------~~~h~~~v~~~~~~p~~~ 332 (812)
|.+.+-. . +.. |...... +. +...-..|+|..||.
T Consensus 144 l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~ 222 (928)
T PF04762_consen 144 LLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGE 222 (928)
T ss_pred EEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCc
Confidence 8775321 0 000 0000011 11 333556889999999
Q ss_pred eEEEEEEC---C---CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCc
Q psy4510 333 RVLASCSV---D---LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 333 ~~l~s~~~---d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~ 403 (812)
+||+.+. . +.+|||+-. + .+......-.+--.+++|-|.|++||+... ...|.+|.-...+-+..
T Consensus 223 -yFAVss~~~~~~~~R~iRVy~Re----G-~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF 296 (928)
T PF04762_consen 223 -YFAVSSVEPETGSRRVIRVYSRE----G-ELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEF 296 (928)
T ss_pred -EEEEEEEEcCCCceeEEEEECCC----c-eEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeE
Confidence 4666654 2 579999865 1 133322333344567899999999998765 34577777643333332
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
...+......|..+.|++++ .+||..-.|. |.+|-..+..=- +. +.+. ......+..+.|||..+
T Consensus 297 ~l~~~~~~~~v~~l~Wn~ds-~iLAv~~~~~-vqLWt~~NYHWY-----------LK-qei~-~~~~~~~~~~~Wdpe~p 361 (928)
T PF04762_consen 297 TLRFDPEEEKVIELAWNSDS-EILAVWLEDR-VQLWTRSNYHWY-----------LK-QEIR-FSSSESVNFVKWDPEKP 361 (928)
T ss_pred ecCCCCCCceeeEEEECCCC-CEEEEEecCC-ceEEEeeCCEEE-----------EE-EEEE-ccCCCCCCceEECCCCC
Confidence 22233456789999999986 6888877655 999998776210 00 1111 11123455599999988
Q ss_pred CEEEEEeC-CCeEEEEeCCCCCcccEEeecCCCCeeEEEEc----CCCCCeEEEeeCCCceEEEEeecccCccccccccc
Q psy4510 484 GTIISTAN-SGFNIFRTISDLPSQLLFIHLGQKEIKELHWH----PQLPGTIISTANSGFNIFRTISMSNLTSTEEDNER 558 (812)
Q Consensus 484 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~ 558 (812)
..+..... +.+..+.... .+..+ |.+ .-.++.-++....+..++...+
T Consensus 362 ~~L~v~t~~g~~~~~~~~~-----------------~v~~s~~~~~~D-~g~vaVIDG~~lllTpf~~a~V--------- 414 (928)
T PF04762_consen 362 LRLHVLTSNGQYEIYDFAW-----------------DVSRSPGSSPND-NGTVAVIDGNKLLLTPFRRAVV--------- 414 (928)
T ss_pred CEEEEEecCCcEEEEEEEE-----------------EEEecCCCCccC-ceEEEEEeCCeEEEecccccCC---------
Confidence 87766666 5554443211 11111 111 2334444443222323322221
Q ss_pred ccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccccccc-CCcccccccccc
Q psy4510 559 ELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTV-DDPFQLAEHNKK 637 (812)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~-~~~~~~~~~~~~ 637 (812)
.|.+..........|..++|++++..+++. ..||.|.+|......... ..+.........
T Consensus 415 -----------------PPPMs~~~l~~~~~v~~vaf~~~~~~~avl--~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (928)
T PF04762_consen 415 -----------------PPPMSSYELELPSPVNDVAFSPSNSRFAVL--TSDGSLSIYEWDLKNMWSVKPPKLLSSISLD 475 (928)
T ss_pred -----------------CchHhceEEcCCCCcEEEEEeCCCCeEEEE--ECCCCEEEEEecCCCcccccCcchhhhcccc
Confidence 233334444556789999999999887776 789999999976543210 011100000000
Q ss_pred cCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC---ceEEEEecCCC-------------ceeEEEEecCCC
Q psy4510 638 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREA-------------GAWSVYLYTNRF 701 (812)
Q Consensus 638 ~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D---g~v~iWd~~~~-------------~~~~~~~~s~dg 701 (812)
.........-...+..++|.. +..+++..+.+ ..+.++++... .........++.
T Consensus 476 --------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (928)
T PF04762_consen 476 --------SMDISDSELPLGSLRQLAWLN-DDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDS 546 (928)
T ss_pred --------cccccccccccccEEEEEEeC-CCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCC
Confidence 000001111234678888887 45555555443 67888887432 111222233333
Q ss_pred CEEEeecCCCeEEEeecCC
Q psy4510 702 GVLATGDCKRNIHIWTPRE 720 (812)
Q Consensus 702 ~~lasgs~dg~i~iwd~~~ 720 (812)
..++.-..+|.+...+...
T Consensus 547 ~~~~~q~~~G~v~~~~~~~ 565 (928)
T PF04762_consen 547 GSLYIQTNDGKVFQLSSDG 565 (928)
T ss_pred cEEEEEECCCEEEEeecCC
Confidence 3455666678777655443
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.9e-12 Score=136.50 Aligned_cols=217 Identities=14% Similarity=0.104 Sum_probs=136.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---CceEEeeCCCCCCCCCCCCCceEEcCCCCcE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v 275 (812)
..|.++|.... ..+.+..+...+.+.+|+|+|+.|+..+.. ..|.+||+.++ +. ..+....+.+
T Consensus 176 ~~L~~~D~dG~-----~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g-------~~-~~l~~~~g~~ 242 (427)
T PRK02889 176 YQLQISDADGQ-----NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATG-------RR-RVVANFKGSN 242 (427)
T ss_pred cEEEEECCCCC-----CceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCC-------CE-EEeecCCCCc
Confidence 45777776443 234455677889999999999999887642 45999999875 22 2233334556
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
.+.+|+|++..++++.+.+|...||.+..... ....+..+........|+|+|+.+++++..+|...||.+......
T Consensus 243 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~---~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~ 319 (427)
T PRK02889 243 SAPAWSPDGRTLAVALSRDGNSQIYTVNADGS---GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA 319 (427)
T ss_pred cceEECCCCCEEEEEEccCCCceEEEEECCCC---CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence 78999999954555677888877776543221 234455555566778999999975555545677777766432111
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
...... +.......+|+|+|++|+..+.++ .|.+||+.. +. ...+... .......|+|++..++++...
T Consensus 320 ~~~lt~---~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~---g~-~~~lt~~-~~~~~p~~spdg~~l~~~~~~ 391 (427)
T PRK02889 320 AQRVTF---TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT---GQ-VTALTDT-TRDESPSFAPNGRYILYATQQ 391 (427)
T ss_pred eEEEec---CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC---CC-eEEccCC-CCccCceECCCCCEEEEEEec
Confidence 112222 122344678999999888766554 599999863 32 2333322 334678999998655555544
Q ss_pred CCCEEEE
Q psy4510 433 DDQIALW 439 (812)
Q Consensus 433 dg~v~iw 439 (812)
.|.-.++
T Consensus 392 ~g~~~l~ 398 (427)
T PRK02889 392 GGRSVLA 398 (427)
T ss_pred CCCEEEE
Confidence 5443333
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3e-12 Score=137.91 Aligned_cols=219 Identities=12% Similarity=0.110 Sum_probs=145.1
Q ss_pred CCCceEEEEeCCCCCCeEEEec---CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCC--ceE
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGD---CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPF--QLA 248 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~---~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~--~i~ 248 (812)
+...+...+||| +|+.||..+ .+..|.+|++.+++. ..+....+.+.+++|+|||+.|+.. +.++ .|.
T Consensus 197 ~~~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~-----~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~ 270 (429)
T PRK03629 197 SPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY 270 (429)
T ss_pred CCCceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCe-----EEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence 446788999999 999888643 345799999987652 2222233345578999999988865 3444 488
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE--eCCCCCcceeccccccCCCCCEEEEE
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw--d~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
+||+.++ ....+..+...+....|+|++..++++...++...|| ++.++. ...+..+........
T Consensus 271 ~~d~~tg--------~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~-----~~~lt~~~~~~~~~~ 337 (429)
T PRK03629 271 VMDLASG--------QIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDAD 337 (429)
T ss_pred EEECCCC--------CEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC-----eEEeecCCCCccCEE
Confidence 8898774 2334444455678899999994344444445555555 555543 223333444567789
Q ss_pred EcCCCCeEEEEEECC--CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc---EEEEecCCCCCC
Q psy4510 327 WSPGEKRVLASCSVD--LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC---IHVWDLRRFKKG 401 (812)
Q Consensus 327 ~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~---i~iwd~~~~~~~ 401 (812)
|+|+|+.+++++..+ ..|.+||+.++. ...+... .......|+|+|++|+.++.++. +.++++ .+
T Consensus 338 ~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~----~~~Lt~~--~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~----~G 407 (429)
T PRK03629 338 VSSDGKFMVMVSSNGGQQHIAKQDLATGG----VQVLTDT--FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST----DG 407 (429)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCC----eEEeCCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEEC----CC
Confidence 999999654444443 358888987543 2222121 22346789999998888887764 667777 35
Q ss_pred CceEEcccCCCCEEEEEEccC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.....+..|.+.+...+|+|-
T Consensus 408 ~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 408 RFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred CCeEECccCCCCcCCcccCCC
Confidence 667778888888999999983
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-12 Score=138.27 Aligned_cols=218 Identities=13% Similarity=0.031 Sum_probs=140.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC---CCceEEeeCCCCCCCCCCCCCceEEcCCCCcE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD---PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v 275 (812)
..|.|||..... .+.+..|...+.+.+|+|+|+.|+.++. ...|.+|++.++ + ...+....+..
T Consensus 184 ~~l~i~D~~g~~-----~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g-------~-~~~l~~~~g~~ 250 (433)
T PRK04922 184 YALQVADSDGYN-----PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATG-------Q-RELVASFRGIN 250 (433)
T ss_pred EEEEEECCCCCC-----ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCC-------C-EEEeccCCCCc
Confidence 468899986543 3456677788999999999999998773 346999999875 2 12233334445
Q ss_pred EEEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe--EEEEECCC
Q psy4510 276 FAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS--IRIWDTRV 351 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~ 351 (812)
.+++|+|+|..++++.+.+| .|++||+.++. ...+..+.......+|+|+++.++++...+|. |.++++..
T Consensus 251 ~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-----~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~ 325 (433)
T PRK04922 251 GAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-----LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG 325 (433)
T ss_pred cCceECCCCCEEEEEEeCCCCceEEEEECCCCC-----eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 68899999955555666666 59999998765 23445555556788999999965555445555 55556653
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
+. ...+ ..+.......+|+|+|+.|+..+.++ .|.+||+.. +.. ..+. +........|+|++..+++
T Consensus 326 g~----~~~l-t~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~---g~~-~~Lt-~~~~~~~p~~spdG~~i~~ 395 (433)
T PRK04922 326 GS----AERL-TFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST---GSV-RTLT-PGSLDESPSFAPNGSMVLY 395 (433)
T ss_pred CC----eEEe-ecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC---CCe-EECC-CCCCCCCceECCCCCEEEE
Confidence 22 1222 11223345689999999877665433 589999863 332 2333 2234556799999854444
Q ss_pred EEECCC--CEEEEEcCCC
Q psy4510 429 SGGADD--QIALWDLAVE 444 (812)
Q Consensus 429 s~~~dg--~v~iwd~~~~ 444 (812)
+....+ .|.++++...
T Consensus 396 ~s~~~g~~~L~~~~~~g~ 413 (433)
T PRK04922 396 ATREGGRGVLAAVSTDGR 413 (433)
T ss_pred EEecCCceEEEEEECCCC
Confidence 444333 4667777543
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=7e-11 Score=128.57 Aligned_cols=199 Identities=22% Similarity=0.318 Sum_probs=154.6
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc-----EEEEEecCCCCCEEEEEeCCCcE
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE-----GFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
.+.|....+....+.++.+..+..+.+|+...+ . +..-..+... ..-+.++++. -++++|+.-+.|
T Consensus 87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~-------~-~~~~i~~~er~~l~~~~~~g~s~~~-~~i~~gsv~~~i 157 (967)
T KOG0974|consen 87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNS-------S-VLSKIQSDERCTLYSSLIIGDSAEE-LYIASGSVFGEI 157 (967)
T ss_pred cccccccchhhhcceEEEEEcCceEEEEecccC-------c-eehhcCCCceEEEEeEEEEeccCcE-EEEEeccccccE
Confidence 344555666677889999999999999998874 2 2221222221 1223344544 679999999999
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
.+|++.... ....+.+|.+.|.++.|+-+|. +++++|.|.++|+|++.+.....+ . --+|+..|..++|.|+
T Consensus 158 ivW~~~~dn----~p~~l~GHeG~iF~i~~s~dg~-~i~s~SdDRsiRlW~i~s~~~~~~--~-~fgHsaRvw~~~~~~n 229 (967)
T KOG0974|consen 158 IVWKPHEDN----KPIRLKGHEGSIFSIVTSLDGR-YIASVSDDRSIRLWPIDSREVLGC--T-GFGHSARVWACCFLPN 229 (967)
T ss_pred EEEeccccC----CcceecccCCceEEEEEccCCc-EEEEEecCcceeeeecccccccCc--c-cccccceeEEEEeccc
Confidence 999998444 2336899999999999999999 699999999999999996554431 2 2589999999999998
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC-CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT-APVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+++++.|-+.++|+.. ...+..+..|. ..|.++...+.. ..++|++.|+.+++|++....
T Consensus 230 --~i~t~gedctcrvW~~~----~~~l~~y~~h~g~~iw~~~~~~~~-~~~vT~g~Ds~lk~~~l~~r~ 291 (967)
T KOG0974|consen 230 --RIITVGEDCTCRVWGVN----GTQLEVYDEHSGKGIWKIAVPIGV-IIKVTGGNDSTLKLWDLNGRG 291 (967)
T ss_pred --eeEEeccceEEEEEecc----cceehhhhhhhhcceeEEEEcCCc-eEEEeeccCcchhhhhhhccc
Confidence 89999999999999774 56666888884 568999998875 689999999999999987653
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.2e-11 Score=110.74 Aligned_cols=239 Identities=14% Similarity=0.229 Sum_probs=157.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC--CEEEEEEccCCCcEEEEEECC------CCEEEE
Q psy4510 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA--PVTTVEWHPTESSTFASGGAD------DQIALW 439 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~~l~s~~~d------g~v~iw 439 (812)
...+++|+.+...+++|..+| .+||+...++.. ...+.+.+ .+..+-|-.+ .+.+.||.. +.|.||
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~---~~r~~~~~G~~~veMLfR~N--~laLVGGg~~pky~pNkviIW 80 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKES---ASRQFIDGGFKIVEMLFRSN--YLALVGGGSRPKYPPNKVIIW 80 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhh---hhhccccCchhhhhHhhhhc--eEEEecCCCCCCCCCceEEEE
Confidence 345599999999999998877 899999743322 11122222 2233333321 233444443 479999
Q ss_pred EcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcc-cEEeecCCCCee
Q psy4510 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQ-LLFIHLGQKEIK 518 (812)
Q Consensus 440 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~ 518 (812)
|=... ..........+|.++.+.++ .++..-...+.+|.-....... .+.........
T Consensus 81 DD~k~-----------------~~i~el~f~~~I~~V~l~r~---riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGl- 139 (346)
T KOG2111|consen 81 DDLKE-----------------RCIIELSFNSEIKAVKLRRD---RIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGL- 139 (346)
T ss_pred ecccC-----------------cEEEEEEeccceeeEEEcCC---eEEEEecCeEEEEEcCCChhheeeeecccCCCce-
Confidence 94333 33334444568999999985 6777777788888665332222 22222212233
Q ss_pred EEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEecc
Q psy4510 519 ELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQY 598 (812)
Q Consensus 519 ~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 598 (812)
++..|.....+++.-+.....+++..+...... .......|.+.|.+++.+.+
T Consensus 140 -C~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~--------------------------~p~~I~AH~s~Iacv~Ln~~ 192 (346)
T KOG2111|consen 140 -CSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPN--------------------------APSIINAHDSDIACVALNLQ 192 (346)
T ss_pred -EeecCCCCceEEEcCCCccceEEEEEhhhcCcC--------------------------CceEEEcccCceeEEEEcCC
Confidence 334444446666666555555555555442111 23568899999999999999
Q ss_pred CCeEEEEeecCcce-EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC--CCceEEEEeCCCCCCeEEec
Q psy4510 599 GSTTLAGVWGEVGK-VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH--LTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 599 g~~l~~~~~~~dg~-I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh--~~~V~~l~~sp~~~~~las~ 675 (812)
|..++++ |..|+ |||||..++. +++.++-- ...|.+++||| +..+||.+
T Consensus 193 Gt~vATa--StkGTLIRIFdt~~g~-------------------------~l~E~RRG~d~A~iy~iaFSp-~~s~Lavs 244 (346)
T KOG2111|consen 193 GTLVATA--STKGTLIRIFDTEDGT-------------------------LLQELRRGVDRADIYCIAFSP-NSSWLAVS 244 (346)
T ss_pred ccEEEEe--ccCcEEEEEEEcCCCc-------------------------EeeeeecCCchheEEEEEeCC-CccEEEEE
Confidence 9999998 77776 8999999987 45555432 25899999999 88899999
Q ss_pred CCCceEEEEecCC
Q psy4510 676 DCKRNIHIWTPRE 688 (812)
Q Consensus 676 s~Dg~v~iWd~~~ 688 (812)
|.-|+|.|+.+..
T Consensus 245 SdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 245 SDKGTLHIFSLRD 257 (346)
T ss_pred cCCCeEEEEEeec
Confidence 9999999999976
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-11 Score=133.95 Aligned_cols=213 Identities=13% Similarity=0.095 Sum_probs=134.7
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-C--CcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-K--RNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-d--g~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..|.++|... .....+..+...+.+.+|+|++ ..|+..+. + ..|++||+.++.. ..+....+.
T Consensus 176 ~~L~~~D~dG--------~~~~~l~~~~~~v~~p~wSPDG-~~la~~s~~~~~~~I~~~dl~~g~~-----~~l~~~~g~ 241 (427)
T PRK02889 176 YQLQISDADG--------QNAQSALSSPEPIISPAWSPDG-TKLAYVSFESKKPVVYVHDLATGRR-----RVVANFKGS 241 (427)
T ss_pred cEEEEECCCC--------CCceEeccCCCCcccceEcCCC-CEEEEEEccCCCcEEEEEECCCCCE-----EEeecCCCC
Confidence 3566666643 3445566677889999999999 56665543 2 3599999987752 223333455
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKK 400 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~ 400 (812)
+....|+|+|+.++++.+.+|...||.+..... ....+ ..+........|+|+|+.|+..+ .+|...||.+.. .
T Consensus 242 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~--~~~~l-t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~--~ 316 (427)
T PRK02889 242 NSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS--GLRRL-TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPA--S 316 (427)
T ss_pred ccceEECCCCCEEEEEEccCCCceEEEEECCCC--CcEEC-CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEEC--C
Confidence 678999999997666778888877776542211 23333 33445566789999999766554 456777776642 1
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCC---CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADD---QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
......+..+........|+|+|. .|+..+.++ .|.+||+..... .....+ .......
T Consensus 317 ~g~~~~lt~~g~~~~~~~~SpDG~-~Ia~~s~~~g~~~I~v~d~~~g~~-----------------~~lt~~-~~~~~p~ 377 (427)
T PRK02889 317 GGAAQRVTFTGSYNTSPRISPDGK-LLAYISRVGGAFKLYVQDLATGQV-----------------TALTDT-TRDESPS 377 (427)
T ss_pred CCceEEEecCCCCcCceEECCCCC-EEEEEEccCCcEEEEEEECCCCCe-----------------EEccCC-CCccCce
Confidence 122222222233445688999985 666555443 599999987632 111111 2235679
Q ss_pred EcCCCCCEEEEEeCCCeE
Q psy4510 478 WHPQLPGTIISTANSGFN 495 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~ 495 (812)
|+|++..++++...++..
T Consensus 378 ~spdg~~l~~~~~~~g~~ 395 (427)
T PRK02889 378 FAPNGRYILYATQQGGRS 395 (427)
T ss_pred ECCCCCEEEEEEecCCCE
Confidence 999998888877666543
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.4e-09 Score=122.76 Aligned_cols=435 Identities=13% Similarity=0.174 Sum_probs=244.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEE----ccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iw----d~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
...+.|.++.|-+ +...|+.+..+|.|.+. +.... .......-...|.|++||||+..|+.+..++++.+
T Consensus 73 ~~~~~ivs~~yl~-d~~~l~~~~~~Gdi~~~~~~~~~~~~-----~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~ 146 (928)
T PF04762_consen 73 DPNDKIVSFQYLA-DSESLCIALASGDIILVREDPDPDED-----EIEIVGSVDSGILAASWSPDEELLALVTGEGNLLL 146 (928)
T ss_pred CCCCcEEEEEecc-CCCcEEEEECCceEEEEEccCCCCCc-----eeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEE
Confidence 3457899999999 88888888889999998 44433 23334455679999999999999999988888766
Q ss_pred eeCCC-------------CC-----------CCCCC---CC--------Cc------eEEcCCCCcEEEEEecCCCCCEE
Q psy4510 250 HNKKR-------------GK-----------GPGIP---TP--------PL------FSFSGHLTEGFAMDWSSTEPGVL 288 (812)
Q Consensus 250 wd~~~-------------~~-----------~~~~~---~~--------~~------~~~~~h~~~v~~l~~sp~~~~~l 288 (812)
-...= +. ..+.. .+ |. ..+. +.+.-..++|..|| .++
T Consensus 147 mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG-~yF 224 (928)
T PF04762_consen 147 MTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDG-EYF 224 (928)
T ss_pred EeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCC-cEE
Confidence 43210 00 00000 00 00 1122 33456789999999 677
Q ss_pred EEEeC------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC---CCeEEEEECCCCCccccee
Q psy4510 289 ATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV---DLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 289 ~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~ 359 (812)
|+.+. -+.|+||+-+ +. ....-..-.+--.+++|.|.|+ ++|+... ...|.+|.-+....+.-..
T Consensus 225 AVss~~~~~~~~R~iRVy~Re-G~----L~stSE~v~gLe~~l~WrPsG~-lIA~~q~~~~~~~VvFfErNGLrhgeF~l 298 (928)
T PF04762_consen 225 AVSSVEPETGSRRVIRVYSRE-GE----LQSTSEPVDGLEGALSWRPSGN-LIASSQRLPDRHDVVFFERNGLRHGEFTL 298 (928)
T ss_pred EEEEEEcCCCceeEEEEECCC-ce----EEeccccCCCccCCccCCCCCC-EEEEEEEcCCCcEEEEEecCCcEeeeEec
Confidence 77664 2579999965 32 2222222223345789999998 6777654 3567777755332222222
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
.+ ......|..+.|++++.+||....|. |.+|-..+.. .-..+.+.. ....+..+.|+|..+..|...+.+|.+..
T Consensus 299 ~~-~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH-WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~ 375 (928)
T PF04762_consen 299 RF-DPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYH-WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEI 375 (928)
T ss_pred CC-CCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCE-EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEE
Confidence 22 24566899999999999999877665 9999987633 111222222 23345559999998888988888888877
Q ss_pred EEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE--EEeCCCCCcccEEeecCCCC
Q psy4510 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI--FRTISDLPSQLLFIHLGQKE 516 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 516 (812)
+++.-... +. . ...|+..+.++......+.+ |+...-.|+.......-...
T Consensus 376 ~~~~~~v~--------------------~s-~------~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~ 428 (928)
T PF04762_consen 376 YDFAWDVS--------------------RS-P------GSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSP 428 (928)
T ss_pred EEEEEEEE--------------------ec-C------CCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCC
Confidence 76543210 00 0 01122334444444444333 33334444554455555679
Q ss_pred eeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe
Q psy4510 517 IKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC 596 (812)
Q Consensus 517 i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 596 (812)
|.+++|++......+...++...++ .+.............. .... ...............+..++|.
T Consensus 429 v~~vaf~~~~~~~avl~~d~~l~~~-~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 495 (928)
T PF04762_consen 429 VNDVAFSPSNSRFAVLTSDGSLSIY-EWDLKNMWSVKPPKLL--SSIS----------LDSMDISDSELPLGSLRQLAWL 495 (928)
T ss_pred cEEEEEeCCCCeEEEEECCCCEEEE-EecCCCcccccCcchh--hhcc----------cccccccccccccccEEEEEEe
Confidence 9999999995443333333323322 2222221110000000 0000 0000000111123467778888
Q ss_pred ccCCeEEEEeec-CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEec
Q psy4510 597 QYGSTTLAGVWG-EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 597 ~~g~~l~~~~~~-~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~ 675 (812)
.+...++..... ....+.++++...... ..+.....-.+.+..+...+ ....++.-
T Consensus 496 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~q 552 (928)
T PF04762_consen 496 NDDTLLVLSDSDSNQSKIVLVDIDDSENS----------------------ASVESSTEVDGVVLIISSSP-DSGSLYIQ 552 (928)
T ss_pred CCCEEEEEEecCcccceEEEEEeccCCCc----------------------eeEEEEeccCceEEEEeeCC-CCcEEEEE
Confidence 877666665322 3467888887443210 02222222334555566666 34346666
Q ss_pred CCCceEEEEecCC
Q psy4510 676 DCKRNIHIWTPRE 688 (812)
Q Consensus 676 s~Dg~v~iWd~~~ 688 (812)
..+|.+...+...
T Consensus 553 ~~~G~v~~~~~~~ 565 (928)
T PF04762_consen 553 TNDGKVFQLSSDG 565 (928)
T ss_pred ECCCEEEEeecCC
Confidence 6688887655544
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.2e-12 Score=119.94 Aligned_cols=257 Identities=19% Similarity=0.246 Sum_probs=161.2
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC------------CcEEEEEecCCCC-CEEE
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL------------TEGFAMDWSSTEP-GVLA 289 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~------------~~v~~l~~sp~~~-~~l~ 289 (812)
..-|.++.|...|.+|++|+.+|.|.++.-...... ...-...+..|. ..|..+.|.+++. ..++
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~--ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKG--EYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeeccccccc--ceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 456889999999999999999999999976543100 111233344454 3578899998763 3467
Q ss_pred EEeCCCcEEEEeCCCCCccee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 290 TGDCKRNIHIWTPREAGAWQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 290 sg~~dg~i~vwd~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
....|.+|++|.+........ ...+..+..+.++.+.. .+.+..|-.+ ...|.+.+..+|.-.
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~-------p~~~~~~~~v---------ea~prRv~aNaHtyh 166 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL-------PVEGRHDLEV---------EASPRRVYANAHTYH 166 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeec-------eeecccccee---------eeeeeeeccccceeE
Confidence 777899999999987652110 01111122223333322 1111111111 122344555789999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-----CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-----TAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
|++|+++.+...++++ +|=.|.+|.+.-....-.+..++.+ +.-|++..|+|..-++|+-++..|+|++-|++.
T Consensus 167 iNSIS~NsD~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~ 245 (433)
T KOG1354|consen 167 INSISVNSDKETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQ 245 (433)
T ss_pred eeeeeecCccceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechh
Confidence 9999999999988876 4778999999753322233344433 456899999998878899899999999999986
Q ss_pred CCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 444 ERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
...........+...-|....|...--..|.++.|++.+. ++++-..-.+.+|+.
T Consensus 246 ~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGr-yilsRDyltvk~wD~ 300 (433)
T KOG1354|consen 246 SALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGR-YILSRDYLTVKLWDL 300 (433)
T ss_pred hhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCc-EEEEeccceeEEEec
Confidence 5432222122222222333333333345789999999974 555555566677765
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.3e-11 Score=122.62 Aligned_cols=332 Identities=13% Similarity=0.050 Sum_probs=175.7
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
++-..++.+.+.|..+. +.+..+......-..+.|+|++ +++++++.||.|.++|+.+.+ ....+..
T Consensus 10 V~~~~~~~v~viD~~t~-------~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~----~v~~i~~- 76 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATN-------KVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGK----VVATIKV- 76 (369)
T ss_dssp EEEGGGTEEEEEETTT--------SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSS----EEEEEE--
T ss_pred EEecCCCEEEEEECCCC-------eEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCccc----EEEEEec-
Confidence 45557899999998874 7777787654444567899999 788888899999999999987 3444433
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc------CCCCeEEEEEcCCCCEEE-EEeCCCcEE
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA------HTSDVNVISWNRTEPLIV-SGGDDGCIH 391 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~-sg~~dg~i~ 391 (812)
......++++++|+++++++...+.+.++|.++.+ .+..++.. ....+..+..+|....++ +--..+.|.
T Consensus 77 G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle---~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~ 153 (369)
T PF02239_consen 77 GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE---PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIW 153 (369)
T ss_dssp SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT-----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCceeEecccccc---ceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEE
Confidence 34568899999999877788889999999998543 33333211 345678888888888444 445558888
Q ss_pred EEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC
Q psy4510 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK 471 (812)
Q Consensus 392 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (812)
+.|.... ..................|.|++..++++....+.|.++|..+.+.............. +-..+.|...+
T Consensus 154 vVdy~d~--~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~-~~~~~php~~g 230 (369)
T PF02239_consen 154 VVDYSDP--KNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPG-PGANFPHPGFG 230 (369)
T ss_dssp EEETTTS--SCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEET-TEEEEEETTTE
T ss_pred EEEeccc--cccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeecccccccc-ccccccCCCcc
Confidence 8898753 22222333345567789999998545555566778999998876431000000000000 01112222222
Q ss_pred ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee-CCCceEEEEeecccCc
Q psy4510 472 EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSGFNIFRTISMSNLT 550 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~-~~~~~~~~~~~~~~l~ 550 (812)
.+....- .+...+...+.+...+++...-...+.+ ...... .-+..||+.+...+... ......+..+....+
T Consensus 231 ~vw~~~~--~~~~~~~~ig~~~v~v~d~~~wkvv~~I--~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl- 304 (369)
T PF02239_consen 231 PVWATSG--LGYFAIPLIGTDPVSVHDDYAWKVVKTI--PTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTL- 304 (369)
T ss_dssp EEEEEEB--SSSSEEEEEE--TTT-STTTBTSEEEEE--E-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGT-
T ss_pred eEEeecc--ccceecccccCCccccchhhcCeEEEEE--ECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCc-
Confidence 2221111 1112222233333222222221111111 111222 55666787555544411 222233333333321
Q ss_pred ccccccccccccccCCCCCCccccCCCccceEEec-ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 551 STEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR-HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
.....+.. ....+..+.|+++|+++..+.+..+|.|.+||..+.+
T Consensus 305 ---------------------------~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~ 350 (369)
T PF02239_consen 305 ---------------------------KVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLK 350 (369)
T ss_dssp ---------------------------EEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred ---------------------------ceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcE
Confidence 01111111 1124889999999999999888777899999999986
|
... |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.6e-10 Score=114.14 Aligned_cols=340 Identities=13% Similarity=0.170 Sum_probs=203.8
Q ss_pred cEEEEccCCCCcccccccccCCC---CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGH---TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h---~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.+.+|+...... ..+...+ ..+++..++|+.|++++.+ .+..++|++...+ ..+.+... ..++
T Consensus 12 ~~~l~~~~~~~~----~~~~f~~~~~~~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~-------~~~lt~~~--~~~~ 77 (566)
T KOG2315|consen 12 GFYLFNGPGSKD----AVTVFEQNKTSRPCNVFAYSNNGRLFAYS-DNQVVKVFEIATL-------KVVLCVEL--KKTY 77 (566)
T ss_pred eeEEeccCCccc----cccccccCCCCCcceeEEEcCCCcEEEEE-cCCeEEEEEccCC-------cEEEEecc--ceee
Confidence 588887655332 1222222 4457788999999877654 5678999998774 34444433 3789
Q ss_pred EEEecCCCCCEEEEE-------eC---CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 277 AMDWSSTEPGVLATG-------DC---KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg-------~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.|.|+|.+ .+|.+= .. .-.+.+|++.++- ....+..-...-++.+|+.++. +++--..+.+.+
T Consensus 78 ~L~fSP~g-~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~----~~s~~q~k~Q~~W~~qfs~dEs--l~arlv~nev~f 150 (566)
T KOG2315|consen 78 DLLFSPKG-NYLLTWEPWAIYGPKNASNPNVLVYNVETGV----QRSQIQKKMQNGWVPQFSIDES--LAARLVSNEVQF 150 (566)
T ss_pred eeeecccc-cccccccccccccCCCCCCCceeeeeeccce----ehhheehhhhcCcccccccchh--hhhhhhcceEEE
Confidence 99999998 566542 11 2357799998843 1111211111226899999986 455455688999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCC--EEEE-----EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVS-----GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~s-----g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
|++..... ... .-|...|+.+.++|... .+|+ +|.-+.|+||........+++..-......=..+.|
T Consensus 151 ~~~~~f~~--~~~---kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~W 225 (566)
T KOG2315|consen 151 YDLGSFKT--IQH---KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKW 225 (566)
T ss_pred EecCCccc--eee---eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEe
Confidence 99975221 122 34678899999999854 4443 455678999988632222333222222334456889
Q ss_pred ccCCCcEEEEEEC--CC---------CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEE
Q psy4510 420 HPTESSTFASGGA--DD---------QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 488 (812)
Q Consensus 420 ~p~~~~~l~s~~~--dg---------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~ 488 (812)
++-+..+|+.++. |. ++++.++... .........++|.++.|+|.+....+.
T Consensus 226 N~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~-----------------s~~V~L~k~GPVhdv~W~~s~~EF~Vv 288 (566)
T KOG2315|consen 226 NKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGE-----------------SVSVPLLKEGPVHDVTWSPSGREFAVV 288 (566)
T ss_pred ccCCceEEEEEEEeecCCCccccccceEEEEEecCc-----------------eEEEecCCCCCceEEEECCCCCEEEEE
Confidence 9887666665554 22 3445554422 233333344566666666665333322
Q ss_pred EeCC--CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCC
Q psy4510 489 TANS--GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESE 566 (812)
Q Consensus 489 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 566 (812)
-+.- .+.+| ..+
T Consensus 289 yGfMPAkvtif-------------------------nlr----------------------------------------- 302 (566)
T KOG2315|consen 289 YGFMPAKVTIF-------------------------NLR----------------------------------------- 302 (566)
T ss_pred EecccceEEEE-------------------------cCC-----------------------------------------
Confidence 2210 00111 011
Q ss_pred CCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE-eecCcceEEEEeccccccccCCcccccccccccCCCCCCC
Q psy4510 567 GSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG-VWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIP 645 (812)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~-~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (812)
....+.-..++=+++.|+|.|++++.+ -+.--|.|.|||+.+.+
T Consensus 303 ------------~~~v~df~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K----------------------- 347 (566)
T KOG2315|consen 303 ------------GKPVFDFPEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRK----------------------- 347 (566)
T ss_pred ------------CCEeEeCCCCCccceEECCCCCEEEEeecCCCCCceEEEeccchh-----------------------
Confidence 111222233456788999999987765 33457889999999865
Q ss_pred CCCeeeecCCCCceEEEEeCCCCCCeEEecCC------CceEEEEecCC
Q psy4510 646 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPRE 688 (812)
Q Consensus 646 ~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~------Dg~v~iWd~~~ 688 (812)
++..+..- .-+-+.|+| ||++|+|+.. |+.++||+...
T Consensus 348 --~i~~~~a~--~tt~~eW~P-dGe~flTATTaPRlrvdNg~KiwhytG 391 (566)
T KOG2315|consen 348 --LIAKFKAA--NTTVFEWSP-DGEYFLTATTAPRLRVDNGIKIWHYTG 391 (566)
T ss_pred --hccccccC--CceEEEEcC-CCcEEEEEeccccEEecCCeEEEEecC
Confidence 44444432 456689999 8999998876 78888998865
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-11 Score=132.14 Aligned_cols=207 Identities=15% Similarity=0.110 Sum_probs=133.0
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..|.+||... .....+..+...+.+.+|+|++ ..|+..+. ...|++|++.++.. ..+..+.+.
T Consensus 184 ~~l~i~D~~g--------~~~~~lt~~~~~v~~p~wSpDg-~~la~~s~~~~~~~l~~~dl~~g~~-----~~l~~~~g~ 249 (433)
T PRK04922 184 YALQVADSDG--------YNPQTILRSAEPILSPAWSPDG-KKLAYVSFERGRSAIYVQDLATGQR-----ELVASFRGI 249 (433)
T ss_pred EEEEEECCCC--------CCceEeecCCCccccccCCCCC-CEEEEEecCCCCcEEEEEECCCCCE-----EEeccCCCC
Confidence 3588888765 3345566677889999999999 56666553 34699999987652 223334445
Q ss_pred EEEEEEcCCCCeEEEEEECCC--eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCc--EEEEecC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDL--SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGC--IHVWDLR 396 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~--i~iwd~~ 396 (812)
..++.|+|+|+.++++.+.+| .|.+||+.++. +..+ ..+.......+|+|+|+.|+.++ .+|. |.++|+.
T Consensus 250 ~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~----~~~l-t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~ 324 (433)
T PRK04922 250 NGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ----LTRL-TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS 324 (433)
T ss_pred ccCceECCCCCEEEEEEeCCCCceEEEEECCCCC----eEEC-ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 568899999998777777666 58999987532 2333 34444556789999999777665 4455 5555664
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC-CC--CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA-DD--QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
. +. ...+..+......++|+|++. .|+..+. ++ .|.+||+..... .....+ ...
T Consensus 325 ~---g~-~~~lt~~g~~~~~~~~SpDG~-~Ia~~~~~~~~~~I~v~d~~~g~~-----------------~~Lt~~-~~~ 381 (433)
T PRK04922 325 G---GS-AERLTFQGNYNARASVSPDGK-KIAMVHGSGGQYRIAVMDLSTGSV-----------------RTLTPG-SLD 381 (433)
T ss_pred C---CC-eEEeecCCCCccCEEECCCCC-EEEEEECCCCceeEEEEECCCCCe-----------------EECCCC-CCC
Confidence 2 22 333333334455789999985 5554433 33 589999876632 111111 123
Q ss_pred eEEEEcCCCCCEEEEEeCCC
Q psy4510 474 KELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~~ 493 (812)
....|+|++..++++....+
T Consensus 382 ~~p~~spdG~~i~~~s~~~g 401 (433)
T PRK04922 382 ESPSFAPNGSMVLYATREGG 401 (433)
T ss_pred CCceECCCCCEEEEEEecCC
Confidence 45789999987776665543
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.6e-11 Score=128.47 Aligned_cols=206 Identities=14% Similarity=0.109 Sum_probs=137.4
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..|.++|... .....+..|...+.+.+|+|+| ..|+..+. +..|++||+.++. ...+..+.+.
T Consensus 182 ~~l~~~d~dg--------~~~~~lt~~~~~v~~p~wSpDG-~~lay~s~~~g~~~i~~~dl~~g~-----~~~l~~~~g~ 247 (435)
T PRK05137 182 KRLAIMDQDG--------ANVRYLTDGSSLVLTPRFSPNR-QEITYMSYANGRPRVYLLDLETGQ-----RELVGNFPGM 247 (435)
T ss_pred eEEEEECCCC--------CCcEEEecCCCCeEeeEECCCC-CEEEEEEecCCCCEEEEEECCCCc-----EEEeecCCCc
Confidence 3678888755 4456677788899999999999 56655543 4689999998775 2334456667
Q ss_pred EEEEEEcCCCCeEEEEEECCCe--EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEecC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DG--CIHVWDLR 396 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~ 396 (812)
+...+|+|+|+.++++.+.++. |.+||+.++. ...+ ..+.......+|+|+|+.|+..+. +| .|.++|+.
T Consensus 248 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~----~~~L-t~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~ 322 (435)
T PRK05137 248 TFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT----TTRL-TDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD 322 (435)
T ss_pred ccCcEECCCCCEEEEEEecCCCceEEEEECCCCc----eEEc-cCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence 7889999999987777777765 6667876432 2333 345555677999999997776653 33 57777875
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC-C--CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA-D--DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
+.....+..+...+....|+|++. .|+..+. . ..|.+||+..... ..+ .. ...+
T Consensus 323 ----g~~~~~lt~~~~~~~~~~~SpdG~-~ia~~~~~~~~~~i~~~d~~~~~~---------------~~l--t~-~~~~ 379 (435)
T PRK05137 323 ----GSNPRRISFGGGRYSTPVWSPRGD-LIAFTKQGGGQFSIGVMKPDGSGE---------------RIL--TS-GFLV 379 (435)
T ss_pred ----CCCeEEeecCCCcccCeEECCCCC-EEEEEEcCCCceEEEEEECCCCce---------------Eec--cC-CCCC
Confidence 233344444455677789999985 5554443 2 3577888754421 111 11 1246
Q ss_pred eEEEEcCCCCCEEEEEeCC
Q psy4510 474 KELHWHPQLPGTIISTANS 492 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~ 492 (812)
....|+|++..++++....
T Consensus 380 ~~p~~spDG~~i~~~~~~~ 398 (435)
T PRK05137 380 EGPTWAPNGRVIMFFRQTP 398 (435)
T ss_pred CCCeECCCCCEEEEEEccC
Confidence 6789999988777666543
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-11 Score=112.39 Aligned_cols=233 Identities=17% Similarity=0.181 Sum_probs=165.6
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC---CCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCC-
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD---LKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH- 271 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~---~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h- 271 (812)
.-|.+.+|++...+... .......-+..+..+.|+. +|. .|+-+...|.|.++..... .....+++-
T Consensus 44 R~Gkl~Lys~~d~~~~~-l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~-------~ss~~L~~ls 115 (339)
T KOG0280|consen 44 RSGKLHLYSLEDMKLSP-LDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDED-------ESSVHLRGLS 115 (339)
T ss_pred eccceEEEeecccccCc-cceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccc-------eeeeeecccc
Confidence 35778999887765332 1111222344566666653 344 5666778899999987653 222223221
Q ss_pred -----CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 272 -----LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 272 -----~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.....++.|++.+ ..++++..+|.+.+-+..... ....+.++.|.-.++-..|+...++++.+|+.|+.+..
T Consensus 116 ~~ki~~~~~lslD~~~~~-~~i~vs~s~G~~~~v~~t~~~--le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~ 192 (339)
T KOG0280|consen 116 SKKISVVEALSLDISTSG-TKIFVSDSRGSISGVYETEMV--LEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSC 192 (339)
T ss_pred hhhhhheeeeEEEeeccC-ceEEEEcCCCcEEEEecceee--eeecccccccceeeeeeecccCCCceEEecCCCceEEE
Confidence 2245688999988 678888889999965544433 11244788999999999999999899999999999999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 425 (812)
||+|.++ ..+..-...|...|.+|.-+|.. .+++||+.|-.|++||.|+ .++++..-. -.+.|..+.++|....
T Consensus 193 ~D~R~p~--~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn--m~kPl~~~~-v~GGVWRi~~~p~~~~ 267 (339)
T KOG0280|consen 193 WDIRIPK--TFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN--MGKPLFKAK-VGGGVWRIKHHPEIFH 267 (339)
T ss_pred EEecCCc--ceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc--ccCccccCc-cccceEEEEecchhhh
Confidence 9999533 45666557899999999988764 5999999999999999997 456665544 3488999999997544
Q ss_pred EEEEEECCCCEEEEEcCCCC
Q psy4510 426 TFASGGADDQIALWDLAVER 445 (812)
Q Consensus 426 ~l~s~~~dg~v~iwd~~~~~ 445 (812)
.++.+..-+-.+|-+.+...
T Consensus 268 ~lL~~CMh~G~ki~~~~~~~ 287 (339)
T KOG0280|consen 268 RLLAACMHNGAKILDSSDKV 287 (339)
T ss_pred HHHHHHHhcCceEEEecccc
Confidence 44444444457888877664
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-10 Score=118.57 Aligned_cols=263 Identities=17% Similarity=0.222 Sum_probs=173.4
Q ss_pred CCCCCeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
.|...-+.|..+|||+|+. +|...-.|++||+..- ...|..|. .++..+....+.-..++---.|++|.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL---------SLKFERhlDae~V~feiLsDD~SK~v~L~~DR~Ie 119 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL---------SLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIE 119 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccc---------eeeeeecccccceeEEEeccchhhheEeecCceee
Confidence 5778888999999999875 4557888999999763 22344444 34444433333324455555677776
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+-..- +.... .. -...-.+++++.-... |.+++....|+-+++..+. -+..+ ....+.+++|..++-.
T Consensus 120 fHak~-G~hy~---~R---IP~~GRDm~y~~~scD-ly~~gsg~evYRlNLEqGr---fL~P~-~~~~~~lN~v~in~~h 187 (703)
T KOG2321|consen 120 FHAKY-GRHYR---TR---IPKFGRDMKYHKPSCD-LYLVGSGSEVYRLNLEQGR---FLNPF-ETDSGELNVVSINEEH 187 (703)
T ss_pred ehhhc-Ceeee---ee---cCcCCccccccCCCcc-EEEeecCcceEEEEccccc---ccccc-ccccccceeeeecCcc
Confidence 64321 11000 00 1123356666654443 4445555678888887433 33333 4456889999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcc------cCCC-----CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFK------HHTA-----PVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------~h~~-----~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
.+|++|+.+|.|..||.|. ...+.++. .|.+ .|+++.|+.+| ..+++|+.+|.|.|||++..+.
T Consensus 188 gLla~Gt~~g~VEfwDpR~---ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~g-L~~aVGts~G~v~iyDLRa~~p- 262 (703)
T KOG2321|consen 188 GLLACGTEDGVVEFWDPRD---KSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDG-LHVAVGTSTGSVLIYDLRASKP- 262 (703)
T ss_pred ceEEecccCceEEEecchh---hhhheeeecccccCCCccccccCcceEEEecCCc-eeEEeeccCCcEEEEEcccCCc-
Confidence 9999999999999999994 33333332 2333 49999999875 7899999999999999998853
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC-EEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG-TIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
.+..-|...-+|..+.|.+.+.. .+++....-+.+|+...+.+...+ .....+..+++-|+.
T Consensus 263 --------------l~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asi---Ept~~lND~C~~p~s 325 (703)
T KOG2321|consen 263 --------------LLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASI---EPTSDLNDFCFVPGS 325 (703)
T ss_pred --------------eeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeec---cccCCcCceeeecCC
Confidence 55666666779999999887443 455555555677766555433322 223458889999985
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-11 Score=113.96 Aligned_cols=154 Identities=22% Similarity=0.477 Sum_probs=106.2
Q ss_pred EEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE-EECCCeEE
Q psy4510 276 FAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS-CSVDLSIR 345 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s-~~~dg~i~ 345 (812)
..+.|+|.|..+++.... -+...+|.++..... .....+ ...++|.+++|+|++..++++ |..++.|.
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~-~~~i~l-~~~~~I~~~~WsP~g~~favi~g~~~~~v~ 86 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP-VESIEL-KKEGPIHDVAWSPNGNEFAVIYGSMPAKVT 86 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc-cceeec-cCCCceEEEEECcCCCEEEEEEccCCcccE
Confidence 368899999666555541 234666666444321 112222 234579999999999964333 44678999
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+||++ ...+..+ +...++.+.|+|+|++|++|+. .|.|.+||.+ ..+.+..+. | ..++.++|+|+
T Consensus 87 lyd~~----~~~i~~~---~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~---~~~~i~~~~-~-~~~t~~~WsPd 154 (194)
T PF08662_consen 87 LYDVK----GKKIFSF---GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR---KKKKISTFE-H-SDATDVEWSPD 154 (194)
T ss_pred EEcCc----ccEeEee---cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECC---CCEEeeccc-c-CcEEEEEEcCC
Confidence 99996 3334444 3567899999999999998875 3679999998 345565554 3 35789999999
Q ss_pred CCcEEEEEEC------CCCEEEEEcCCC
Q psy4510 423 ESSTFASGGA------DDQIALWDLAVE 444 (812)
Q Consensus 423 ~~~~l~s~~~------dg~v~iwd~~~~ 444 (812)
|. +|++++. |+.++||+....
T Consensus 155 Gr-~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 155 GR-YLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred CC-EEEEEEeccceeccccEEEEEecCe
Confidence 84 6666653 788999998644
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.3e-09 Score=110.39 Aligned_cols=469 Identities=14% Similarity=0.143 Sum_probs=270.9
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-----------ceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-----------WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
.....++.|+... +++|+|+.||.++|..+.+... .....+.+.||...|.-+.|+.+.+. |-+...
T Consensus 14 nvkL~c~~WNke~-gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QK-LTtSDt 91 (1189)
T KOG2041|consen 14 NVKLHCAEWNKES-GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQK-LTTSDT 91 (1189)
T ss_pred CceEEEEEEcccC-CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccc-ccccCC
Confidence 3567899999987 8999999999999998765421 11124568899999999999998885 888889
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEc
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 420 (812)
+|.|.+|-+-.++-...+ +.....+-|.+++|+.+|..++....||.|.+=.+. +..+.--.-.......+.|+
T Consensus 92 ~GlIiVWmlykgsW~EEM--iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd----GNRIwgKeLkg~~l~hv~ws 165 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEM--INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD----GNRIWGKELKGQLLAHVLWS 165 (1189)
T ss_pred CceEEEEeeecccHHHHH--hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec----cceecchhcchheccceeec
Confidence 999999998743221111 223446679999999999999999999998887774 22222111112234578899
Q ss_pred cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc--------CCCCCEEEEEeCC
Q psy4510 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH--------PQLPGTIISTANS 492 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--------p~~~~~~~~~~~~ 492 (812)
++. ..++.+-..|.+.++|....-..... ...... ..-.+. .....|..+.|. |+.|.+.+.-.++
T Consensus 166 ~D~-~~~Lf~~ange~hlydnqgnF~~Kl~--~~c~Vn--~tg~~s-~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nG 239 (1189)
T KOG2041|consen 166 EDL-EQALFKKANGETHLYDNQGNFERKLE--KDCEVN--GTGIFS-NFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANG 239 (1189)
T ss_pred ccH-HHHHhhhcCCcEEEecccccHHHhhh--hceEEe--eeeeec-CCCccccceeeccCccccCCCCCCEEEEEEcCc
Confidence 986 46666777899999998654221110 000000 000111 111246667764 5777777777788
Q ss_pred CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcc
Q psy4510 493 GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDED 572 (812)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 572 (812)
...+.+..++..+.++... ..+..+.|+++ |.+++.++.......... .+.+.+.
T Consensus 240 r~QiMR~eND~~Pvv~dtg---m~~vgakWnh~--G~vLAvcG~~~da~~~~d---------~n~v~Fy----------- 294 (1189)
T KOG2041|consen 240 RMQIMRSENDPEPVVVDTG---MKIVGAKWNHN--GAVLAVCGNDSDADEPTD---------SNKVHFY----------- 294 (1189)
T ss_pred eehhhhhcCCCCCeEEecc---cEeecceecCC--CcEEEEccCcccccCccc---------cceEEEe-----------
Confidence 8888887777665555432 67889999999 666666544211110000 0000000
Q ss_pred ccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccccccc--CCcccccccccccCCCCCCCCCCee
Q psy4510 573 RRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLF 650 (812)
Q Consensus 573 ~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (812)
..-......+......|++++|-..|-+++.+ -|+.|++=+++.....- ....... ...+..+...+.
T Consensus 295 -sp~G~i~gtlkvpg~~It~lsWEg~gLriA~A---vdsfiyfanIRP~ykWgy~e~TvVy~------y~~~e~p~y~i~ 364 (1189)
T KOG2041|consen 295 -SPYGHIVGTLKVPGSCITGLSWEGTGLRIAIA---VDSFIYFANIRPEYKWGYIEETVVYV------YQKEELPQYGIM 364 (1189)
T ss_pred -ccchhheEEEecCCceeeeeEEcCCceEEEEE---ecceEEEEeecccceEEEeeeEEEEE------EccCCCcceEEE
Confidence 00112344556666789999998888888887 57788887776543210 0000000 000000100110
Q ss_pred eecC--------CCCceEEEEeCCCCCCeEEecCCCceEEEEecCC--Cce-------------------eEEEEecCCC
Q psy4510 651 SFSG--------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE--AGA-------------------WSVYLYTNRF 701 (812)
Q Consensus 651 ~~~g--------h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~--~~~-------------------~~~~~~s~dg 701 (812)
-... .-....+++|+. +.-.|++-..|+.+.-++.-. +++ +.-.|..-++
T Consensus 365 Fwdtk~nek~vK~V~~~~~~a~~~-ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~ 443 (1189)
T KOG2041|consen 365 FWDTKTNEKTVKTVTHFENMAFYR-EHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNG 443 (1189)
T ss_pred EEecccChhhhhhhcceeehheec-ccEEEEeccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeeeeEEEecc
Confidence 0000 001334566666 455666666677665552211 111 1122344456
Q ss_pred CEEEeecCCCeEEEeecCCCCCcc----------------------------cccccccCCCcceeEeEEecCCceeEEe
Q psy4510 702 GVLATGDCKRNIHIWTPREAGAWQ----------------------------VDQKPLVGHTNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 702 ~~lasgs~dg~i~iwd~~~~~~~~----------------------------~~~~~~~gH~~~V~~l~fs~dg~~~L~s 753 (812)
.+++.+|.+. +.+|.....+... --..++.|-+++|-+|+.| .+ +|..
T Consensus 444 ~~vviAS~e~-~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~s--dk-~l~v 519 (1189)
T KOG2041|consen 444 ICVVIASEER-YFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCIS--DK-FLMV 519 (1189)
T ss_pred eEEEEecccc-EEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCCCcceeeeec--ce-EEEE
Confidence 6777776654 6777654322100 0013345556778777765 34 7888
Q ss_pred eccCCceEEeeecCcc--eEEEEeeeeeEEEeeecchhhhhhh
Q psy4510 754 CSVDRSNRIGARRDML--YCFFVSLVHCIFVWLKYQLFVDVYY 794 (812)
Q Consensus 754 ~s~Dg~i~iWd~~~~~--~~~~~~~~~~~~~w~~~~~~~~~~~ 794 (812)
+-..|.|.=+.+.+.- ...........+..+.....|.+..
T Consensus 520 areSG~I~rySl~nv~l~n~y~~n~~~y~~~lNCnstRlAiId 562 (1189)
T KOG2041|consen 520 ARESGGIYRYSLNNVVLTNSYPVNPSIYSIKLNCNSTRLAIID 562 (1189)
T ss_pred EeccCceEEEEecceeeeeccccCchheeEeeccCcchhhhhh
Confidence 8889999999887764 1111122224444455444444443
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-09 Score=111.87 Aligned_cols=339 Identities=11% Similarity=0.049 Sum_probs=177.7
Q ss_pred EEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC
Q psy4510 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367 (812)
Q Consensus 288 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 367 (812)
+++-..++.|.+.|..+.+ ....+......-..+.|+|++++ +++++.||.|.++|+.+. +.+.++.. ..
T Consensus 9 ~V~~~~~~~v~viD~~t~~----~~~~i~~~~~~h~~~~~s~Dgr~-~yv~~rdg~vsviD~~~~---~~v~~i~~--G~ 78 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNK----VVARIPTGGAPHAGLKFSPDGRY-LYVANRDGTVSVIDLATG---KVVATIKV--GG 78 (369)
T ss_dssp EEEEGGGTEEEEEETTT-S----EEEEEE-STTEEEEEE-TT-SSE-EEEEETTSEEEEEETTSS---SEEEEEE---SS
T ss_pred EEEecCCCEEEEEECCCCe----EEEEEcCCCCceeEEEecCCCCE-EEEEcCCCeEEEEECCcc---cEEEEEec--CC
Confidence 3455568999999998876 45555544333455789999995 666789999999999954 34555522 34
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcccC-------CCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 368 DVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKHH-------TAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
...+++++++|++++++. ..+.+.++|.++ .++++.+... ...+.+|..+|..+.++++.-.-+.|.+-
T Consensus 79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~t---le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV 155 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAET---LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV 155 (369)
T ss_dssp EEEEEEE--TTTEEEEEEEETTEEEEEETTT-----EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred CcceEEEcCCCCEEEEEecCCCceeEecccc---ccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence 568899999999777665 689999999984 5566655432 34677888888765444444445778777
Q ss_pred EcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEEEeCCCCCcccEEe--ecCCCC
Q psy4510 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIFRTISDLPSQLLFI--HLGQKE 516 (812)
Q Consensus 440 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~ 516 (812)
|....+.. ...+.. ......+..|+|++.+++++... +.+.+++.........+.. .++..+
T Consensus 156 dy~d~~~~--------------~~~~i~-~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~ 220 (369)
T PF02239_consen 156 DYSDPKNL--------------KVTTIK-VGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGP 220 (369)
T ss_dssp ETTTSSCE--------------EEEEEE---TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETT
T ss_pred Eecccccc--------------ceeeec-ccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccc
Confidence 87665321 222222 23467789999998877776543 3444554333211111111 011112
Q ss_pred eeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe
Q psy4510 517 IKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC 596 (812)
Q Consensus 517 i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 596 (812)
+..+ .||.. +.+-+....+...+..+.... ...+ ........+.+....++ .-+..+
T Consensus 221 ~~~~-php~~-g~vw~~~~~~~~~~~~ig~~~---------v~v~-----------d~~~wkvv~~I~~~G~g-lFi~th 277 (369)
T PF02239_consen 221 GANF-PHPGF-GPVWATSGLGYFAIPLIGTDP---------VSVH-----------DDYAWKVVKTIPTQGGG-LFIKTH 277 (369)
T ss_dssp EEEE-EETTT-EEEEEEEBSSSSEEEEEE--T---------TT-S-----------TTTBTSEEEEEE-SSSS---EE--
T ss_pred cccc-cCCCc-ceEEeeccccceecccccCCc---------cccc-----------hhhcCeEEEEEECCCCc-ceeecC
Confidence 2222 23331 222333322221111111111 0001 11123344455554455 778889
Q ss_pred ccCCeEEEEe--ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC-CCCceEEEEeCCCCCCe-E
Q psy4510 597 QYGSTTLAGV--WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGV-L 672 (812)
Q Consensus 597 ~~g~~l~~~~--~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-h~~~V~~l~~sp~~~~~-l 672 (812)
|+++++.+.. ....++|.++|..+.+ ...++.. -...+..+.|++ +|+. .
T Consensus 278 P~s~~vwvd~~~~~~~~~v~viD~~tl~-------------------------~~~~i~~~~~~~~~h~ef~~-dG~~v~ 331 (369)
T PF02239_consen 278 PDSRYVWVDTFLNPDADTVQVIDKKTLK-------------------------VVKTITPGPGKRVVHMEFNP-DGKEVW 331 (369)
T ss_dssp TT-SEEEEE-TT-SSHT-EEEEECCGTE-------------------------EEE-HHHHHT--EEEEEE-T-TSSEEE
T ss_pred CCCccEEeeccCCCCCceEEEEECcCcc-------------------------eeEEEeccCCCcEeccEECC-CCCEEE
Confidence 9999998861 2457899999999875 2333321 123589999999 5554 4
Q ss_pred EecCCCc-eEEEEecCCCceeEEE-EecCCCCE
Q psy4510 673 ATGDCKR-NIHIWTPREAGAWSVY-LYTNRFGV 703 (812)
Q Consensus 673 as~s~Dg-~v~iWd~~~~~~~~~~-~~s~dg~~ 703 (812)
+|.-..+ .|.++|..+.+..... ..+|.|.+
T Consensus 332 vS~~~~~~~i~v~D~~Tl~~~~~i~~~tP~G~f 364 (369)
T PF02239_consen 332 VSVWDGNGAIVVYDAKTLKEKKRIPVPTPTGKF 364 (369)
T ss_dssp EEEE--TTEEEEEETTTTEEEEEEE--SEEEEE
T ss_pred EEEecCCCEEEEEECCCcEEEEEEEeeCCCeEe
Confidence 4443333 7888888886655433 34454443
|
... |
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.2e-11 Score=111.09 Aligned_cols=155 Identities=16% Similarity=0.308 Sum_probs=105.5
Q ss_pred eeeEcCCCCcEEEeeC----------CCceEEeeCCCCCCCCCCCCCceEEcC-CCCcEEEEEecCCCCCEE-EEEeCCC
Q psy4510 228 DLQWSDLKTALQTVDD----------PFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGVL-ATGDCKR 295 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~~----------d~~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l-~sg~~dg 295 (812)
.+.|++.|++|+.-.. -+...+|.++.. ..+...+.- ..++|.+++|+|++..++ +.|..++
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~------~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~ 83 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEK------NIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPA 83 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecC------CCccceeeccCCCceEEEEECcCCCEEEEEEccCCc
Confidence 4778899987765433 133566666442 244444433 345799999999994443 3355678
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC---CCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV---DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|.+||++.. ....+ +...++.+.|+|+|+. |++++. .|.|.+||++ ....+... .| ..++.+
T Consensus 84 ~v~lyd~~~~-----~i~~~--~~~~~n~i~wsP~G~~-l~~~g~~n~~G~l~~wd~~---~~~~i~~~--~~-~~~t~~ 149 (194)
T PF08662_consen 84 KVTLYDVKGK-----KIFSF--GTQPRNTISWSPDGRF-LVLAGFGNLNGDLEFWDVR---KKKKISTF--EH-SDATDV 149 (194)
T ss_pred ccEEEcCccc-----EeEee--cCCCceEEEECCCCCE-EEEEEccCCCcEEEEEECC---CCEEeecc--cc-CcEEEE
Confidence 9999999622 23333 3567889999999995 666653 4679999998 34444443 23 457899
Q ss_pred EEcCCCCEEEEEeC------CCcEEEEecCCCCCCCceEE
Q psy4510 373 SWNRTEPLIVSGGD------DGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 373 ~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~ 406 (812)
+|+|+|++|++++. |..++||+.. ++.+..
T Consensus 150 ~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~----G~~l~~ 185 (194)
T PF08662_consen 150 EWSPDGRYLATATTSPRLRVDNGFKIWSFQ----GRLLYK 185 (194)
T ss_pred EEcCCCCEEEEEEeccceeccccEEEEEec----CeEeEe
Confidence 99999999888864 6789999984 555544
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.1e-11 Score=109.79 Aligned_cols=252 Identities=20% Similarity=0.218 Sum_probs=174.4
Q ss_pred ceEEEEeC--CCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCC---eeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 178 EGFAMDWS--STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS---AEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 178 ~i~~~~~s--p~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~---V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
.++.+.|+ +.+|. .|+-+-..|.|.++........ ..+..+....-. ..++.|++.+..++++..+|.+.+-+
T Consensus 71 ~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss-~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~ 149 (339)
T KOG0280|consen 71 TEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESS-VHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY 149 (339)
T ss_pred ccceeeeeeccCCccceeeeccccceEEEEeeccceee-eeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence 34445554 34566 6677778899999976654321 122223332222 34678999999999999999988555
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
.... ..+.++..++|.-+.+.+.|+...++++.+|+.|+.+..||++..+.+ .-...+-|...|.+|.-+|..
T Consensus 150 ~t~~-----~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~--i~~n~kvH~~GV~SI~ss~~~ 222 (339)
T KOG0280|consen 150 ETEM-----VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF--IWHNSKVHTSGVVSIYSSPPK 222 (339)
T ss_pred ccee-----eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce--eeecceeeecceEEEecCCCC
Confidence 5443 345566889999999999999999899999999999999999955431 223345588899999999988
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCC--CceEEc
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKG--SSVATF 407 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~--~~~~~~ 407 (812)
++.+++|+.|-.|++||+|.. .+++..- .-.+.|..+.++|.-. +|+++=.. -.+|-+....... ..+...
T Consensus 223 ~~~I~TGsYDe~i~~~DtRnm--~kPl~~~--~v~GGVWRi~~~p~~~~~lL~~CMh~-G~ki~~~~~~~~e~~~~~~s~ 297 (339)
T KOG0280|consen 223 PTYIATGSYDECIRVLDTRNM--GKPLFKA--KVGGGVWRIKHHPEIFHRLLAACMHN-GAKILDSSDKVLEFQIVLPSD 297 (339)
T ss_pred CceEEEeccccceeeeehhcc--cCccccC--ccccceEEEEecchhhhHHHHHHHhc-CceEEEecccccchheeeecc
Confidence 889999999999999999953 3334332 3458899999999654 34444333 3677777642211 134455
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEEC-CCCEE-EEEcCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGA-DDQIA-LWDLAV 443 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~-iwd~~~ 443 (812)
+.|.+-...-.|.... .+|++++. |+.++ +|-..+
T Consensus 298 ~~hdSl~YG~DWd~~~-~~lATCsFYDk~~~~~Wl~~t 334 (339)
T KOG0280|consen 298 KIHDSLCYGGDWDSKD-SFLATCSFYDKKIRQLWLHIT 334 (339)
T ss_pred ccccceeecccccccc-ceeeeeeccccceeeeeeecc
Confidence 6777777777885543 47888653 66644 665443
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.7e-09 Score=106.38 Aligned_cols=347 Identities=11% Similarity=0.160 Sum_probs=205.6
Q ss_pred CcEEEEeCCCCCcceeccccccCC---CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGH---TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
-.+.+|....... ......+ ..+++..+++++|+ +...+.+..++|++..... .+.+.. ...+..
T Consensus 11 e~~~l~~~~~~~~----~~~~f~~~~~~~~~~v~~~S~~G~--lfA~~~~~~v~i~~~~~~~---~~lt~~---~~~~~~ 78 (566)
T KOG2315|consen 11 EGFYLFNGPGSKD----AVTVFEQNKTSRPCNVFAYSNNGR--LFAYSDNQVVKVFEIATLK---VVLCVE---LKKTYD 78 (566)
T ss_pred ceeEEeccCCccc----cccccccCCCCCcceeEEEcCCCc--EEEEEcCCeEEEEEccCCc---EEEEec---cceeee
Confidence 4577887655331 2222222 34577889999997 4555667899999987543 233331 227899
Q ss_pred EEEcCCCCEEEEE-----eC-----CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 372 ISWNRTEPLIVSG-----GD-----DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 372 l~~~~~~~~l~sg-----~~-----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
+.|+|.+.+|.+= .. .-.+.+|++.+ +.....+......-....|++++. |++--..+.+.+|++
T Consensus 79 L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet---~~~~s~~q~k~Q~~W~~qfs~dEs--l~arlv~nev~f~~~ 153 (566)
T KOG2315|consen 79 LLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVET---GVQRSQIQKKMQNGWVPQFSIDES--LAARLVSNEVQFYDL 153 (566)
T ss_pred eeecccccccccccccccccCCCCCCCceeeeeecc---ceehhheehhhhcCcccccccchh--hhhhhhcceEEEEec
Confidence 9999999887652 11 23477999873 333333322211225889999863 444444577999999
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC-CCEEEEEe--C----CCeEEEEeCCCCCcccEEeec-C
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL-PGTIISTA--N----SGFNIFRTISDLPSQLLFIHL-G 513 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~-~ 513 (812)
...+ .....-+...|..+.++|.. +..+++-- . ..+++|........+.+.... -
T Consensus 154 ~~f~-----------------~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF 216 (566)
T KOG2315|consen 154 GSFK-----------------TIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF 216 (566)
T ss_pred CCcc-----------------ceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccc
Confidence 8752 22223334578899999883 33333321 1 224555544222222111111 1
Q ss_pred CCCeeEEEEcCCCCCeEEEeeCCCc---------eEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe
Q psy4510 514 QKEIKELHWHPQLPGTIISTANSGF---------NIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI 584 (812)
Q Consensus 514 ~~~i~~~~~~p~~~~~~i~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (812)
...-..+.|++.+.++++.+..+-. ..++.+... ........
T Consensus 217 kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-----------------------------g~s~~V~L 267 (566)
T KOG2315|consen 217 KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-----------------------------GESVSVPL 267 (566)
T ss_pred ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEec-----------------------------CceEEEec
Confidence 1233457888887777766554311 111111111 00011223
Q ss_pred cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEe
Q psy4510 585 RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 664 (812)
Q Consensus 585 ~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~ 664 (812)
...++|.++.|+|.|+.+++.-|-.-..+.|||++.. ++..+ -.++-.++-|
T Consensus 268 ~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~--------------------------~v~df--~egpRN~~~f 319 (566)
T KOG2315|consen 268 LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK--------------------------PVFDF--PEGPRNTAFF 319 (566)
T ss_pred CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC--------------------------EeEeC--CCCCccceEE
Confidence 3467999999999999887765566778999998765 23333 2446677888
Q ss_pred CCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEe
Q psy4510 665 SSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 744 (812)
Q Consensus 665 sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs 744 (812)
+| .|++|+.|+-++ -.|.+-+||+.+.+ ++..+..-. -+-..|+
T Consensus 320 np-~g~ii~lAGFGN-----------------------------L~G~mEvwDv~n~K----~i~~~~a~~--tt~~eW~ 363 (566)
T KOG2315|consen 320 NP-HGNIILLAGFGN-----------------------------LPGDMEVWDVPNRK----LIAKFKAAN--TTVFEWS 363 (566)
T ss_pred CC-CCCEEEEeecCC-----------------------------CCCceEEEeccchh----hccccccCC--ceEEEEc
Confidence 88 676777666542 15778888887755 455555433 3447999
Q ss_pred cCCceeEEeec------cCCceEEeeecCcc
Q psy4510 745 PGEKRVLASCS------VDRSNRIGARRDML 769 (812)
Q Consensus 745 ~dg~~~L~s~s------~Dg~i~iWd~~~~~ 769 (812)
|||+ +++||. .|+.++||+..-.+
T Consensus 364 PdGe-~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 364 PDGE-YFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred CCCc-EEEEEeccccEEecCCeEEEEecCce
Confidence 9999 677665 37889999987655
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-10 Score=113.35 Aligned_cols=229 Identities=14% Similarity=0.172 Sum_probs=162.0
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC--CeEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD--LSIR 345 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--g~i~ 345 (812)
...-.+.|..++... ..|++|-.+|.+.+|....+.........+. ....+..+.-++..++++++|+.. ..+.
T Consensus 101 ~~l~~~~I~gl~~~d---g~Litc~~sG~l~~~~~k~~d~hss~l~~la-~g~g~~~~r~~~~~p~Iva~GGke~~n~lk 176 (412)
T KOG3881|consen 101 VSLGTKSIKGLKLAD---GTLITCVSSGNLQVRHDKSGDLHSSKLIKLA-TGPGLYDVRQTDTDPYIVATGGKENINELK 176 (412)
T ss_pred cccccccccchhhcC---CEEEEEecCCcEEEEeccCCccccccceeee-cCCceeeeccCCCCCceEecCchhccccee
Confidence 344456666666543 5888899999999999985542111222222 235678888888888889999998 8899
Q ss_pred EEECCCCCcccceeecCC--------cCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 346 IWDTRVINTKSCMLTLPN--------AHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~--------~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
|||+... ..+.+-.. .-.-.++.+.|-+. ...||+++.-+.+++||.+. ..+|+..|..-..+|+
T Consensus 177 iwdle~~---~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~--qRRPV~~fd~~E~~is 251 (412)
T KOG3881|consen 177 IWDLEQS---KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRH--QRRPVAQFDFLENPIS 251 (412)
T ss_pred eeecccc---eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcc--cCcceeEeccccCcce
Confidence 9999853 22222111 11345778899887 66999999999999999996 6789999999999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-e
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-F 494 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~ 494 (812)
++...|.+ +++++|..-+.+..+|++..+. ...+.....+.|.+++.||+.+ ++++++-|+ +
T Consensus 252 ~~~l~p~g-n~Iy~gn~~g~l~~FD~r~~kl---------------~g~~~kg~tGsirsih~hp~~~-~las~GLDRyv 314 (412)
T KOG3881|consen 252 STGLTPSG-NFIYTGNTKGQLAKFDLRGGKL---------------LGCGLKGITGSIRSIHCHPTHP-VLASCGLDRYV 314 (412)
T ss_pred eeeecCCC-cEEEEecccchhheecccCcee---------------eccccCCccCCcceEEEcCCCc-eEEeeccceeE
Confidence 99999987 6899999999999999998842 1112233345899999999986 666666666 4
Q ss_pred EEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
+||+..+.......+. ...++.+.+.++
T Consensus 315 RIhD~ktrkll~kvYv---Ks~lt~il~~~~ 342 (412)
T KOG3881|consen 315 RIHDIKTRKLLHKVYV---KSRLTFILLRDD 342 (412)
T ss_pred EEeecccchhhhhhhh---hccccEEEecCC
Confidence 6666555333333322 234555555444
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.5e-10 Score=110.25 Aligned_cols=209 Identities=22% Similarity=0.335 Sum_probs=154.9
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+.|.|+ -..+++++.+++ ....|++|-..|+|.-+.+...-+.....+....|...|.++-|+-...++++.+.|..
T Consensus 61 psI~~~--mP~~~~~~~y~~-e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~ 137 (404)
T KOG1409|consen 61 PSIYHY--MPSPCSAMEYVS-ESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQ 137 (404)
T ss_pred chhhhh--CCCCceEeeeec-cceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccc
Confidence 456666 457789999999 99999999999999999877655444466777899999999999999999999999887
Q ss_pred eEEeeCCCCCCCCCCCCC-ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
+.--..+.+. +. -+.+. ....++.+.- .+...|...|.|.+-.+..... .....+.+|.+.+.++
T Consensus 138 ~~~hc~e~~~------~lg~Y~~~---~~~t~~~~d~---~~~fvGd~~gqvt~lr~~~~~~--~~i~~~~~h~~~~~~l 203 (404)
T KOG1409|consen 138 FAWHCTESGN------RLGGYNFE---TPASALQFDA---LYAFVGDHSGQITMLKLEQNGC--QLITTFNGHTGEVTCL 203 (404)
T ss_pred eEEEeeccCC------cccceEee---ccCCCCceee---EEEEecccccceEEEEEeecCC--ceEEEEcCcccceEEE
Confidence 7655444431 10 01110 0001111111 1455666677777766654432 1456789999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+|.|... +|.+|..|..+.+||+-... ..... ..+|...|..++.-+.-+.+.+++.||.|.+|++.
T Consensus 204 ~Wd~~~~-~LfSg~~d~~vi~wdigg~~--g~~~e-l~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 204 KWDPGQR-LLFSGASDHSVIMWDIGGRK--GTAYE-LQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred EEcCCCc-EEEeccccCceEEEeccCCc--ceeee-eccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 9999887 79999999999999997422 22233 37899999999988888899999999999999996
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.6e-10 Score=123.06 Aligned_cols=216 Identities=13% Similarity=0.097 Sum_probs=138.7
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---CceEEeeCCCCCCCCCCCCCceEEcCCCCc
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---FQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~ 274 (812)
...|.++|..... .+.+..+...+...+|+|+|++|+.+... ..|.+|++.++ ....+..+.+.
T Consensus 169 ~~~l~~~d~~g~~-----~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g--------~~~~~~~~~~~ 235 (417)
T TIGR02800 169 RYELQVADYDGAN-----PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATG--------QREKVASFPGM 235 (417)
T ss_pred cceEEEEcCCCCC-----CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCC--------CEEEeecCCCC
Confidence 3457778775433 34455677789999999999999887643 47999999874 12333445566
Q ss_pred EEEEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEECC
Q psy4510 275 GFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWDTR 350 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~ 350 (812)
+.+++|+|++..++++.+.++ .|++|++.++. ...+..+........|+|+++.++++....+ .|.++|+.
T Consensus 236 ~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~ 310 (417)
T TIGR02800 236 NGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-----LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDAD 310 (417)
T ss_pred ccceEECCCCCEEEEEECCCCCccEEEEECCCCC-----EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECC
Confidence 778999999954555665554 58888988764 2333445455567799999996555544444 57777776
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
... ...+ ..+...+..+.|+|++++++.++.++ .|.+||+.. + ....+... .......|+|++..++
T Consensus 311 ~~~----~~~l-~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~---~-~~~~l~~~-~~~~~p~~spdg~~l~ 380 (417)
T TIGR02800 311 GGE----VRRL-TFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG---G-GERVLTDT-GLDESPSFAPNGRMIL 380 (417)
T ss_pred CCC----EEEe-ecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC---C-CeEEccCC-CCCCCceECCCCCEEE
Confidence 432 2222 23445667889999999888877765 788888864 2 22333322 2345568999985444
Q ss_pred EEEECCC--CEEEEEc
Q psy4510 428 ASGGADD--QIALWDL 441 (812)
Q Consensus 428 ~s~~~dg--~v~iwd~ 441 (812)
++...++ .+.+.+.
T Consensus 381 ~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 381 YATTRGGRGVLGLVST 396 (417)
T ss_pred EEEeCCCcEEEEEEEC
Confidence 4444343 3444443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.6e-10 Score=118.34 Aligned_cols=226 Identities=12% Similarity=0.110 Sum_probs=131.8
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEE---EeeCCC--ceEEeeCCCCCCCCCCCCCceEEcCCCC
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ---TVDDPF--QLAEHNKKRGKGPGIPTPPLFSFSGHLT 273 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~---s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~h~~ 273 (812)
..|.+.|.+... .+.+......+..-+|||||+.++ +...++ .|.+.++.++ ..+.+..+ .+
T Consensus 165 ~~l~~~d~dG~~-----~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g-----~~~~lt~~---~g 231 (428)
T PRK01029 165 GELWSVDYDGQN-----LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENP-----AGKKILAL---QG 231 (428)
T ss_pred ceEEEEcCCCCC-----ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCC-----CceEeecC---CC
Confidence 356666665543 233444566678889999998633 333443 4666777765 22333333 34
Q ss_pred cEEEEEecCCCCCEEEEEeCCC----cEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 274 EGFAMDWSSTEPGVLATGDCKR----NIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
.....+|||+|..++++.+.+| .+.+|++..+... ....+. ++.+.....+|+|+|+.++++...+|...||.
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g--~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~ 309 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIG--KPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYI 309 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCC--cceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 4557899999954455544333 3444676653110 112222 22234567899999997555555677666665
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 425 (812)
+...........+ ..+...+....|+|+|+.|+..+.+ ..|.+||+.. +. ...+......+....|+|++..
T Consensus 310 ~~~~~~g~~~~~l-t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~---g~-~~~Lt~~~~~~~~p~wSpDG~~ 384 (428)
T PRK01029 310 MQIDPEGQSPRLL-TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT---GR-DYQLTTSPENKESPSWAIDSLH 384 (428)
T ss_pred EECcccccceEEe-ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC---CC-eEEccCCCCCccceEECCCCCE
Confidence 4321111112223 2334566788999999977765443 4689999863 32 3334333445678999999864
Q ss_pred EEEEEEC--CCCEEEEEcCCC
Q psy4510 426 TFASGGA--DDQIALWDLAVE 444 (812)
Q Consensus 426 ~l~s~~~--dg~v~iwd~~~~ 444 (812)
+++++.. ...|.++|+...
T Consensus 385 L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 385 LVYSAGNSNESELYLISLITK 405 (428)
T ss_pred EEEEECCCCCceEEEEECCCC
Confidence 4445443 346788888766
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.1e-10 Score=120.58 Aligned_cols=215 Identities=13% Similarity=0.039 Sum_probs=130.4
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CC--ceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PF--QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~--~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.+.++|..... .+.+..+...+.+.+|||||+.|+..+. ++ .|.+||+.++ ..+.+..+. +...
T Consensus 199 ~l~i~d~dG~~-----~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg-----~~~~lt~~~---g~~~ 265 (448)
T PRK04792 199 QLMIADYDGYN-----EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQ-----VREKVTSFP---GING 265 (448)
T ss_pred EEEEEeCCCCC-----ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCC-----CeEEecCCC---CCcC
Confidence 56666765543 2345566778999999999999987653 33 5888888775 112222222 3344
Q ss_pred EEEecCCCCCEEEEEeCCCc--EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe--EEEEECCCC
Q psy4510 277 AMDWSSTEPGVLATGDCKRN--IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS--IRIWDTRVI 352 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~ 352 (812)
..+|+|++..++++.+.+|. |+++|+.++. ...+..+.......+|+|+++.++++...++. |.++|+.++
T Consensus 266 ~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~-----~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g 340 (448)
T PRK04792 266 APRFSPDGKKLALVLSKDGQPEIYVVDIATKA-----LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASG 340 (448)
T ss_pred CeeECCCCCEEEEEEeCCCCeEEEEEECCCCC-----eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 78999999555566677775 7777887664 23444455567788999999976666555554 555566543
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEE
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 429 (812)
.. ...+. . .......+|+|+|++|+..+. ++. |.++|+.. +. ...+... .......|+|++..++++
T Consensus 341 ~~--~~Lt~-~--g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~---g~-~~~lt~~-~~d~~ps~spdG~~I~~~ 410 (448)
T PRK04792 341 KV--SRLTF-E--GEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET---GA-MQVLTST-RLDESPSVAPNGTMVIYS 410 (448)
T ss_pred CE--EEEec-C--CCCCcCeeECCCCCEEEEEEecCCceEEEEEECCC---CC-eEEccCC-CCCCCceECCCCCEEEEE
Confidence 21 11122 1 222345789999997666544 444 45566653 22 2333222 122345899998655566
Q ss_pred EECCCC--EEEEEcC
Q psy4510 430 GGADDQ--IALWDLA 442 (812)
Q Consensus 430 ~~~dg~--v~iwd~~ 442 (812)
...++. +.+++..
T Consensus 411 ~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 411 TTYQGKQVLAAVSID 425 (448)
T ss_pred EecCCceEEEEEECC
Confidence 655554 5566654
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=126.54 Aligned_cols=284 Identities=16% Similarity=0.305 Sum_probs=188.6
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecC
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~ 396 (812)
.+.+.++..+|.|+. +|.++.-| +.+-|+...-+.. +-+.....-.|-.+.|+|... +-++......-.+|++.
T Consensus 24 ~~~~~a~si~p~grd-i~lAsr~g-l~i~dld~p~~pp--r~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA 99 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRD-IVLASRQG-LYIIDLDDPFTPP--RWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLA 99 (1081)
T ss_pred cCcccceeeccccch-hhhhhhcC-eEEEeccCCCCCc--eeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhh
Confidence 456788899999986 77777755 4556776433322 222122234567788888654 55555556667899998
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
.......-..+.+|...|+.+.|+|+.+.++++++.|-.+..||++.... ++.+
T Consensus 100 ~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~-------------------------p~ys- 153 (1081)
T KOG0309|consen 100 KSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR-------------------------PFYS- 153 (1081)
T ss_pred cCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc-------------------------ceee-
Confidence 76555666677899999999999999999999999999999999987731 1110
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDN 556 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (812)
.. .|+
T Consensus 154 ------------~~-----~w~---------------------------------------------------------- 158 (1081)
T KOG0309|consen 154 ------------TS-----SWR---------------------------------------------------------- 158 (1081)
T ss_pred ------------ee-----ccc----------------------------------------------------------
Confidence 00 000
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccc
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNK 636 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 636 (812)
...+.++|+-....+++. +....|++||+..+.
T Consensus 159 -------------------------------s~asqVkwnyk~p~vlas--shg~~i~vwd~r~gs-------------- 191 (1081)
T KOG0309|consen 159 -------------------------------SAASQVKWNYKDPNVLAS--SHGNDIFVWDLRKGS-------------- 191 (1081)
T ss_pred -------------------------------ccCceeeecccCcchhhh--ccCCceEEEeccCCC--------------
Confidence 011223343333334443 566789999998875
Q ss_pred ccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc------------eeEEEEecCCCC--
Q psy4510 637 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG------------AWSVYLYTNRFG-- 702 (812)
Q Consensus 637 ~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~------------~~~~~~~s~dg~-- 702 (812)
.++..+++|...|..++|.......+.+.+.|++|+.|+..... +|.. .+-|=|.
T Consensus 192 ----------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~-r~~Pfg~g~ 260 (1081)
T KOG0309|consen 192 ----------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRG-RYLPFGEGY 260 (1081)
T ss_pred ----------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceec-cccccCcee
Confidence 27899999999999999987566689999999999999997611 1111 1222221
Q ss_pred EEE--ee-------cCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCC---------ceeEEeeccCCceEEee
Q psy4510 703 VLA--TG-------DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE---------KRVLASCSVDRSNRIGA 764 (812)
Q Consensus 703 ~la--sg-------s~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg---------~~~L~s~s~Dg~i~iWd 764 (812)
++. .| ..+..-..|+..++.. .+.+|.||.+.|....|-..+ .+-|+|-|.|.++|+|-
T Consensus 261 ~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~---pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp 337 (1081)
T KOG0309|consen 261 CIMPMVGGNMVPQLRCENSDLEWNVFDLNT---PVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP 337 (1081)
T ss_pred EeccccCCeeeeeccccchhhhhccccCCc---ceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence 111 11 1122223344444433 788999999999877774322 23499999999999998
Q ss_pred ecCc
Q psy4510 765 RRDM 768 (812)
Q Consensus 765 ~~~~ 768 (812)
+.+.
T Consensus 338 I~~~ 341 (1081)
T KOG0309|consen 338 IDSQ 341 (1081)
T ss_pred ccHH
Confidence 8654
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.5e-09 Score=110.14 Aligned_cols=284 Identities=10% Similarity=0.074 Sum_probs=171.3
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC----CCceEEeeCCCCCCCCCCCCCceEEcCCCCc
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD----PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~----d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~ 274 (812)
+.|++|+++........... ..-......|+++|++++|.++.. .+.|..|.+.... .....+.+.......
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~-~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~---g~L~~~~~~~~~g~~ 88 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQT-VAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT---GTLTLLNSVPSGGSS 88 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEE-EEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT---TEEEEEEEEEESSSC
T ss_pred CcEEEEEEcCCCCCceEeee-ecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc---ceeEEeeeeccCCCC
Confidence 68888888433321111222 224455677899999999988876 5688888887620 012333344333455
Q ss_pred EEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccccc----------cCCCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 275 GFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPL----------VGHTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~----------~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
...++++|++ .+|+++. .+|.|.++++...+........+ ........++.|+|+++.++++.-....
T Consensus 89 p~~i~~~~~g-~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~ 167 (345)
T PF10282_consen 89 PCHIAVDPDG-RFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADR 167 (345)
T ss_dssp EEEEEECTTS-SEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTE
T ss_pred cEEEEEecCC-CEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCE
Confidence 6789999999 5655554 58999999998864322211111 1123457899999999977776666779
Q ss_pred EEEEECCCCCc-ccceeecCCcCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEecCCCCC-CCceEEccc----C--CCCE
Q psy4510 344 IRIWDTRVINT-KSCMLTLPNAHTSDVNVISWNRTEPLIVS-GGDDGCIHVWDLRRFKK-GSSVATFKH----H--TAPV 414 (812)
Q Consensus 344 i~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~-~~~~~~~~~----h--~~~v 414 (812)
|.+|++..... ......+.......-..+.|+|+++++++ .-.++.|.++++..... ...+..... . ....
T Consensus 168 v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T PF10282_consen 168 VYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAP 247 (345)
T ss_dssp EEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSE
T ss_pred EEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCc
Confidence 99999975431 11122222344566789999999996654 45578899999872111 111222211 1 1257
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG- 493 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~- 493 (812)
..|.++|++..+.++....+.|.+|++...... + ..+.....+......+.++|++..++++...++
T Consensus 248 ~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~--------l----~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~ 315 (345)
T PF10282_consen 248 AEIAISPDGRFLYVSNRGSNSISVFDLDPATGT--------L----TLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNT 315 (345)
T ss_dssp EEEEE-TTSSEEEEEECTTTEEEEEEECTTTTT--------E----EEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTE
T ss_pred eeEEEecCCCEEEEEeccCCEEEEEEEecCCCc--------e----EEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCe
Confidence 889999998655555656788999999543110 0 022223333345889999999988888876554
Q ss_pred eEEEEe
Q psy4510 494 FNIFRT 499 (812)
Q Consensus 494 ~~~~~~ 499 (812)
+.+|..
T Consensus 316 v~vf~~ 321 (345)
T PF10282_consen 316 VSVFDI 321 (345)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.5e-09 Score=106.49 Aligned_cols=265 Identities=15% Similarity=0.170 Sum_probs=170.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF----------- 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~----------- 245 (812)
-++..++||| .|.+|++.... .|.+|.-.... +...-....|.-+.|||.+++|.+-+...
T Consensus 33 ~p~~~~~~SP-~G~~l~~~~~~-~V~~~~g~~~~------~l~~~~~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~ 104 (561)
T COG5354 33 WPVAYVSESP-LGTYLFSEHAA-GVECWGGPSKA------KLVRFRHPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPF 104 (561)
T ss_pred cchhheeecC-cchheehhhcc-ceEEccccchh------heeeeecCCceecccCcccceeeeeccCCccChhhccCCc
Confidence 4577899999 99999998875 48899765543 12222345689999999999999976443
Q ss_pred ----ceEEeeCCCCCCCCCCCCCceEEcCCCCc--EE-EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 246 ----QLAEHNKKRGKGPGIPTPPLFSFSGHLTE--GF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 246 ----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~--v~-~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
.+.+||..++ ..+..+.+...+ ++ -+.|+-+. .++|-- ....++|+++ +... ....+..-
T Consensus 105 ~~~n~~~vwd~~sg-------~iv~sf~~~~q~~~~Wp~~k~s~~D-~y~ARv-v~~sl~i~e~-t~n~---~~~p~~~l 171 (561)
T COG5354 105 TSKNNVFVWDIASG-------MIVFSFNGISQPYLGWPVLKFSIDD-KYVARV-VGSSLYIHEI-TDNI---EEHPFKNL 171 (561)
T ss_pred cccCceeEEeccCc-------eeEeeccccCCcccccceeeeeecc-hhhhhh-ccCeEEEEec-CCcc---ccCchhhc
Confidence 3899999986 677777776665 55 78898887 444333 2357999998 4332 12222222
Q ss_pred -CCCEEEEEEcCCCCe-EEEE-----EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe------
Q psy4510 319 -TNSVEDLQWSPGEKR-VLAS-----CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG------ 385 (812)
Q Consensus 319 -~~~v~~~~~~p~~~~-~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~------ 385 (812)
...|.+..|+|.+++ .||. ....++++||.+..... ....++ ....=..+.|++.|.+|+.--
T Consensus 172 r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~-l~tk~l---fk~~~~qLkW~~~g~~ll~l~~t~~ks 247 (561)
T COG5354 172 RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSV-LVTKNL---FKVSGVQLKWQVLGKYLLVLVMTHTKS 247 (561)
T ss_pred cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCe-eeeeee---EeecccEEEEecCCceEEEEEEEeeec
Confidence 257889999997432 2333 35678899999873221 111222 122334688999998544321
Q ss_pred -----CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE-ECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 386 -----DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG-GADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 386 -----~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
....+.|++++. ..+.......++|...+|.|...++.+.. -.+..+.++|++..
T Consensus 248 nKsyfgesnLyl~~~~e----~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--------------- 308 (561)
T COG5354 248 NKSYFGESNLYLLRITE----RSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--------------- 308 (561)
T ss_pred ccceeccceEEEEeecc----cccceeccccccceeeeecccCCceeEEecccccceeecccccc---------------
Confidence 124688888863 33333335688999999999875443333 45778999998765
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
+.+. ..+..=+.+.|+|...+.++++
T Consensus 309 ---l~~~-~Pe~~rNT~~fsp~~r~il~ag 334 (561)
T COG5354 309 ---LRFY-FPEQKRNTIFFSPHERYILFAG 334 (561)
T ss_pred ---eEEe-cCCcccccccccCcccEEEEec
Confidence 2221 1233445677888876555544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-09 Score=118.71 Aligned_cols=207 Identities=16% Similarity=0.146 Sum_probs=133.6
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC---CcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.|.++|... .....+..+...+...+|+|++ ..|+.+... ..|++|++.++.. ..+..+.+.+
T Consensus 171 ~l~~~d~~g--------~~~~~l~~~~~~~~~p~~Spdg-~~la~~~~~~~~~~i~v~d~~~g~~-----~~~~~~~~~~ 236 (417)
T TIGR02800 171 ELQVADYDG--------ANPQTITRSREPILSPAWSPDG-QKLAYVSFESGKPEIYVQDLATGQR-----EKVASFPGMN 236 (417)
T ss_pred eEEEEcCCC--------CCCEEeecCCCceecccCCCCC-CEEEEEEcCCCCcEEEEEECCCCCE-----EEeecCCCCc
Confidence 577777654 3345555667788999999999 566655443 4799999987752 2233345567
Q ss_pred EEEEEcCCCCeEEEEEECCC--eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEecCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDL--SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DG--CIHVWDLRR 397 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~ 397 (812)
.+++|+|+++.++++.+.++ .|.+||+.++. ...+ ..+........|+|+++.|+..+. .+ .|.++|+..
T Consensus 237 ~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~----~~~l-~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~ 311 (417)
T TIGR02800 237 GAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ----LTRL-TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG 311 (417)
T ss_pred cceEECCCCCEEEEEECCCCCccEEEEECCCCC----EEEC-CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 77999999997666666555 58888887432 2223 233444556789999997765554 33 577777753
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC---CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD---QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
+ ....+..+...+..+.|+|++. +|+.++.++ .|.+||+..... ..+ .. .....
T Consensus 312 ---~-~~~~l~~~~~~~~~~~~spdg~-~i~~~~~~~~~~~i~~~d~~~~~~---------------~~l--~~-~~~~~ 368 (417)
T TIGR02800 312 ---G-EVRRLTFRGGYNASPSWSPDGD-LIAFVHREGGGFNIAVMDLDGGGE---------------RVL--TD-TGLDE 368 (417)
T ss_pred ---C-CEEEeecCCCCccCeEECCCCC-EEEEEEccCCceEEEEEeCCCCCe---------------EEc--cC-CCCCC
Confidence 2 2344444556678889999984 666666554 688888876421 111 11 11234
Q ss_pred EEEEcCCCCCEEEEEeCCCe
Q psy4510 475 ELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~ 494 (812)
...|+|++..++++...++.
T Consensus 369 ~p~~spdg~~l~~~~~~~~~ 388 (417)
T TIGR02800 369 SPSFAPNGRMILYATTRGGR 388 (417)
T ss_pred CceECCCCCEEEEEEeCCCc
Confidence 56899998777777766554
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.4e-09 Score=116.65 Aligned_cols=247 Identities=14% Similarity=0.144 Sum_probs=137.2
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCE--EEEEeCCC--cEEEEeCCCCCcceeccccccCCCCC
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV--LATGDCKR--NIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~--l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
.|.+.|.+.+ ....+.........-+|||+|..+ +++...+| .|.+.++..+.. ..+....+.
T Consensus 166 ~l~~~d~dG~--------~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~-----~~lt~~~g~ 232 (428)
T PRK01029 166 ELWSVDYDGQ--------NLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAG-----KKILALQGN 232 (428)
T ss_pred eEEEEcCCCC--------CceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCc-----eEeecCCCC
Confidence 4666666553 223344445566788999999553 33555444 477778876652 223333445
Q ss_pred EEEEEEcCCCCeEEEEEECCC----eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDL----SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLR 396 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~ 396 (812)
....+|+|+|+.++++...+| .+.+|++..+.... ...+...+.......+|+|+|+.|+..+ .+|...||.+.
T Consensus 233 ~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~-~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 233 QLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGK-PRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred ccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCc-ceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 567899999997665554433 34457766432111 1222122223446789999999666554 56765666543
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC--CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD--DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
....+.....+..+...+....|+|+|..+++++..+ ..|.+||+...+. .........+.
T Consensus 312 ~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~-----------------~~Lt~~~~~~~ 374 (428)
T PRK01029 312 IDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD-----------------YQLTTSPENKE 374 (428)
T ss_pred CcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe-----------------EEccCCCCCcc
Confidence 1111223444444556678899999985444444333 3689999987732 11222223567
Q ss_pred EEEEcCCCCCEEEEEeCCC-eEEEE-eCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 475 ELHWHPQLPGTIISTANSG-FNIFR-TISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
...|+|++..++++....+ ..+|. .........+. ...+.+...+|+|-
T Consensus 375 ~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt--~~~g~~~~p~Ws~~ 425 (428)
T PRK01029 375 SPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV--IGSGEKRFPSWGAF 425 (428)
T ss_pred ceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee--cCCCcccCceecCC
Confidence 7899999887776655433 33332 22222222222 23334556666664
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.5e-11 Score=123.31 Aligned_cols=208 Identities=19% Similarity=0.364 Sum_probs=155.6
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC--CcEEEEEecCCCC--CEEEEEeCCCcEE
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEP--GVLATGDCKRNIH 298 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~--~~l~sg~~dg~i~ 298 (812)
.+++.++..+|.|+-++.++.-|. .+-|+... ..|-.-+. |. -.|-...|+|... ..+++.+. ..-.
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl-~i~dld~p------~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~-qkai 94 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGL-YIIDLDDP------FTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSN-QKAI 94 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCe-EEEeccCC------CCCceeee-ccCcchhcceecccCCCCceeEEecCc-chhh
Confidence 456778888899999988887664 45566653 34433332 32 3567888988642 23555444 4556
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+|++....... ....+.+|...|+++.|+|+.+.++++|+.|-.+..||+|.... .+... ..-......+.|+-..
T Consensus 95 iwnlA~ss~~a-Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~--p~ys~-~~w~s~asqVkwnyk~ 170 (1081)
T KOG0309|consen 95 IWNLAKSSSNA-IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR--PFYST-SSWRSAASQVKWNYKD 170 (1081)
T ss_pred hhhhhcCCccc-eEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCc--ceeee-ecccccCceeeecccC
Confidence 89987665322 24567889999999999999999999999999999999996433 34444 3334456778999877
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..+.+.+....|++||+|. ...++..+++|...|.++.|+..-...+.+++.|++|++||.....
T Consensus 171 p~vlasshg~~i~vwd~r~--gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 171 PNVLASSHGNDIFVWDLRK--GSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred cchhhhccCCceEEEeccC--CCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 6666666778899999997 6788999999999999999987655689999999999999998663
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.6e-09 Score=118.05 Aligned_cols=215 Identities=12% Similarity=0.064 Sum_probs=133.4
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---CceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.|.++|.+... .+.+..+...+...+|+|+|++|+..+.. ..|.+|++.++. .+ .+....+.+.
T Consensus 180 ~l~~~d~~g~~-----~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~-----~~---~l~~~~g~~~ 246 (430)
T PRK00178 180 TLQRSDYDGAR-----AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR-----RE---QITNFEGLNG 246 (430)
T ss_pred EEEEECCCCCC-----ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC-----EE---EccCCCCCcC
Confidence 47777776543 34455677889999999999999877633 358888998751 22 2222334455
Q ss_pred EEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEECCCC
Q psy4510 277 AMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWDTRVI 352 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~ 352 (812)
..+|+|+|..++++.+.+| .|++||+.++. ...+..+........|+|+++.++++...+| .|.++++..+
T Consensus 247 ~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-----~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g 321 (430)
T PRK00178 247 APAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-----LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGG 321 (430)
T ss_pred CeEECCCCCEEEEEEccCCCceEEEEECCCCC-----eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 7899999954445665555 58888988765 2334455556677899999997666654444 4666676543
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEE
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-G--CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-g--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 429 (812)
.. . .... . ........|+|+|+.|+..+.. + .|.++|+.. +. ...+.. ........|+|++..++++
T Consensus 322 ~~-~-~lt~-~--~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t---g~-~~~lt~-~~~~~~p~~spdg~~i~~~ 391 (430)
T PRK00178 322 RA-E-RVTF-V--GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR---GS-VRILTD-TSLDESPSVAPNGTMLIYA 391 (430)
T ss_pred CE-E-Eeec-C--CCCccceEECCCCCEEEEEEccCCceEEEEEECCC---CC-EEEccC-CCCCCCceECCCCCEEEEE
Confidence 21 1 1111 1 1223457899999977766543 3 478888863 22 233321 2222356899998655555
Q ss_pred EECCCC--EEEEEcC
Q psy4510 430 GGADDQ--IALWDLA 442 (812)
Q Consensus 430 ~~~dg~--v~iwd~~ 442 (812)
...++. |.++++.
T Consensus 392 ~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 392 TRQQGRGVLMLVSIN 406 (430)
T ss_pred EecCCceEEEEEECC
Confidence 544444 5555654
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-08 Score=102.05 Aligned_cols=353 Identities=14% Similarity=0.102 Sum_probs=209.6
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR- 295 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg- 295 (812)
..+..-.-++..++|||.|++|++... ..|.+|.-... ..+..+. ...|..+.|+|.+ .+|.+=+..+
T Consensus 26 ~~~~~~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~-------~~l~~~~--~~~V~~~~fSP~~-kYL~tw~~~pi 94 (561)
T COG5354 26 TRFESENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSK-------AKLVRFR--HPDVKYLDFSPNE-KYLVTWSREPI 94 (561)
T ss_pred ccccccCcchhheeecCcchheehhhc-cceEEccccch-------hheeeee--cCCceecccCccc-ceeeeeccCCc
Confidence 344446778999999999999987654 45788876663 3334443 3468999999998 7888865544
Q ss_pred --------------cEEEEeCCCCCcceeccccccCCCCC--EE-EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce
Q psy4510 296 --------------NIHIWTPREAGAWQVDQKPLVGHTNS--VE-DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358 (812)
Q Consensus 296 --------------~i~vwd~~~~~~~~~~~~~~~~h~~~--v~-~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 358 (812)
.+.+||+.++. ....+..-..+ .+ -++|+-++.+ +|-- ....+.|+++...-.....
T Consensus 95 ~~pe~e~sp~~~~n~~~vwd~~sg~----iv~sf~~~~q~~~~Wp~~k~s~~D~y-~ARv-v~~sl~i~e~t~n~~~~p~ 168 (561)
T COG5354 95 IEPEIEISPFTSKNNVFVWDIASGM----IVFSFNGISQPYLGWPVLKFSIDDKY-VARV-VGSSLYIHEITDNIEEHPF 168 (561)
T ss_pred cChhhccCCccccCceeEEeccCce----eEeeccccCCcccccceeeeeecchh-hhhh-ccCeEEEEecCCccccCch
Confidence 48999999886 45555544444 44 6789988873 3333 3467999997321111222
Q ss_pred eecCCcCCCCeEEEEEcCCCC--EEEE-----EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEP--LIVS-----GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~--~l~s-----g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
..+ ....|...+|+|.++ .||. ++..+++++|.+.. ...+.+-.-....=..+.|++.|..+++-.-
T Consensus 169 ~~l---r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~---~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~ 242 (561)
T COG5354 169 KNL---RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK---NSVLVTKNLFKVSGVQLKWQVLGKYLLVLVM 242 (561)
T ss_pred hhc---cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC---CCeeeeeeeEeecccEEEEecCCceEEEEEE
Confidence 222 245688889999753 3332 34556677777652 2222222111222234556665532222110
Q ss_pred CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEee
Q psy4510 432 ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIH 511 (812)
Q Consensus 432 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (812)
=+..+.+. .| +...+.+++..
T Consensus 243 -------t~~ksnKs-----------------yf------------------------gesnLyl~~~~----------- 263 (561)
T COG5354 243 -------THTKSNKS-----------------YF------------------------GESNLYLLRIT----------- 263 (561)
T ss_pred -------Eeeecccc-----------------ee------------------------ccceEEEEeec-----------
Confidence 00011100 00 00001111000
Q ss_pred cCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEE
Q psy4510 512 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCIN 591 (812)
Q Consensus 512 ~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 591 (812)
.. -........++|.
T Consensus 264 -----------------------e~------------------------------------------~i~V~~~~~~pVh 278 (561)
T COG5354 264 -----------------------ER------------------------------------------SIPVEKDLKDPVH 278 (561)
T ss_pred -----------------------cc------------------------------------------ccceeccccccce
Confidence 00 0001112345788
Q ss_pred EEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe
Q psy4510 592 RVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 671 (812)
Q Consensus 592 ~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~ 671 (812)
..+|.|.++.+++.+|-..-.+.+++++.... +..-...=..+.||| ..++
T Consensus 279 df~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~----------------------------~~~Pe~~rNT~~fsp-~~r~ 329 (561)
T COG5354 279 DFTWEPLSSRFAVISGYMPASVSVFDLRGNLR----------------------------FYFPEQKRNTIFFSP-HERY 329 (561)
T ss_pred eeeecccCCceeEEecccccceeecccccceE----------------------------EecCCcccccccccC-cccE
Confidence 88888888887777656788888898887641 222233445678899 6778
Q ss_pred EEecCCC---ceEEEEecCC---------CceeEEEEecCCCCEEEeecC------CCeEEEeecCCCCCcccccccccC
Q psy4510 672 LATGDCK---RNIHIWTPRE---------AGAWSVYLYTNRFGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVG 733 (812)
Q Consensus 672 las~s~D---g~v~iWd~~~---------~~~~~~~~~s~dg~~lasgs~------dg~i~iwd~~~~~~~~~~~~~~~g 733 (812)
++.++-| |.+-+|+..+ +...+.+-++|||+++.+... |..|.||++.....
T Consensus 330 il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~---------- 399 (561)
T COG5354 330 ILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKV---------- 399 (561)
T ss_pred EEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCchh----------
Confidence 8887765 5799999887 333455569999998877653 67899999875542
Q ss_pred CCcceeEeEEecCCceeEEeeccCC
Q psy4510 734 HTNSVEDLQWSPGEKRVLASCSVDR 758 (812)
Q Consensus 734 H~~~V~~l~fs~dg~~~L~s~s~Dg 758 (812)
...+.+.|-|.|+ +..+.|.+.
T Consensus 400 --fel~~~~W~p~~~-~~ttsSs~~ 421 (561)
T COG5354 400 --FELTNITWDPSGQ-YVTTSSSCP 421 (561)
T ss_pred --hhhhhccccCCcc-cceeeccCC
Confidence 1456788888888 555555544
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.1e-11 Score=136.30 Aligned_cols=223 Identities=17% Similarity=0.201 Sum_probs=163.9
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
+...|.++.-+| ...+-+||+.||.|++|....+... ......|. ..|+.+.|+..|.....+..||.+.+|....
T Consensus 2207 ~v~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v--~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2207 PVENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQV--VCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred ccCceeeecCCC-CCceEEecCCCceEEEEeccCCCeE--EEeeccCc-chhhhhhhcccCCceeeeccCCceeecccCC
Confidence 346788898899 8888899999999999988776632 11222333 8999999999999999999999999999874
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe---CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD---CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
++....+-|........|-. ..+++++ .++.+.+||........ ... +.|.+.++++++.|..
T Consensus 2283 --------k~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s-~v~--~~H~~gaT~l~~~P~~ 2348 (2439)
T KOG1064|consen 2283 --------KPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNS-LVH--TCHDGGATVLAYAPKH 2348 (2439)
T ss_pred --------cceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCcccc-eee--eecCCCceEEEEcCcc
Confidence 88888889999988888876 3566654 47899999976554311 112 7899999999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-- 409 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-- 409 (812)
+ +|++|+.+|.|++||++. .+...++ +. +. ...+|++|+..|.|+||++.. ...++++..
T Consensus 2349 q-llisggr~G~v~l~D~rq---rql~h~~-~~---------~~-~~~~f~~~ss~g~ikIw~~s~---~~ll~~~p~e~ 2410 (2439)
T KOG1064|consen 2349 Q-LLISGGRKGEVCLFDIRQ---RQLRHTF-QA---------LD-TREYFVTGSSEGNIKIWRLSE---FGLLHTFPSEH 2410 (2439)
T ss_pred e-EEEecCCcCcEEEeehHH---HHHHHHh-hh---------hh-hhheeeccCcccceEEEEccc---cchhhcCchhh
Confidence 8 899999999999999983 3333333 11 44 456999999999999999985 234444432
Q ss_pred -CCCC--E--EEEEEccCCCcEEEEEECCCC
Q psy4510 410 -HTAP--V--TTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 410 -h~~~--v--~~v~~~p~~~~~l~s~~~dg~ 435 (812)
|.+- . ..+..-+. +.|.+++.||+
T Consensus 2411 ak~gfFr~~g~Q~~v~~~--nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2411 AKQGFFRNIGMQINVGQC--NRIFSCGADGT 2439 (2439)
T ss_pred cccchhhhcCceeeeccC--ceEEEecCCCC
Confidence 1110 0 22223332 36777777763
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-08 Score=103.88 Aligned_cols=318 Identities=16% Similarity=0.215 Sum_probs=185.1
Q ss_pred EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC-----------CCe
Q psy4510 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV-----------DLS 343 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-----------dg~ 343 (812)
=+-+.|||.| .+|+|--.. -|.+|--.+-. ..+.+. |. .|.-+.|||+.+ +|++-+. ...
T Consensus 213 etyv~wSP~G-TYL~t~Hk~-GI~lWGG~~f~----r~~RF~-Hp-~Vq~idfSP~Ek-YLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 213 ETYVRWSPKG-TYLVTFHKQ-GIALWGGESFD----RIQRFY-HP-GVQFIDFSPNEK-YLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeeEEecCCc-eEEEEEecc-ceeeecCccHH----HHHhcc-CC-CceeeecCCccc-eEEEecCCccccCcccCCCce
Confidence 3578999999 788888764 48899765544 233333 54 588899999999 4777653 257
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
++|||++++........+ ......-.-+.||.+++++|.-..+ .|.||+...+. ++-.-.-.-..|....|+|.+
T Consensus 284 l~IWDI~tG~lkrsF~~~-~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf~---lld~Kslki~gIr~FswsP~~ 358 (698)
T KOG2314|consen 284 LIIWDIATGLLKRSFPVI-KSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSFM---LLDKKSLKISGIRDFSWSPTS 358 (698)
T ss_pred EEEEEccccchhcceecc-CCCccccceEEeccCCceeEEeccc-eEEEEecCcee---eecccccCCccccCcccCCCc
Confidence 999999976554433332 2233334457899999999987764 69999986321 111111123568889999974
Q ss_pred CcEEEEEEC-----CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe--------
Q psy4510 424 SSTFASGGA-----DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-------- 490 (812)
Q Consensus 424 ~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~-------- 490 (812)
++||--+. -.++.+-.+.+.+. +......+-.=..+.|-.++..+.+-+.
T Consensus 359 -~llAYwtpe~~~~parvtL~evPs~~~----------------iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~ 421 (698)
T KOG2314|consen 359 -NLLAYWTPETNNIPARVTLMEVPSKRE----------------IRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVK 421 (698)
T ss_pred -ceEEEEcccccCCcceEEEEecCccce----------------eeeccceeeeccEEEeccCCcEEEEEEEeecccccc
Confidence 56654322 12344444443321 1111111112234566666555444332
Q ss_pred --CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCC
Q psy4510 491 --NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGS 568 (812)
Q Consensus 491 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 568 (812)
...+.||+.....-+. ....-...|..++|-|.++...+.++....+.+..+.+..
T Consensus 422 g~f~n~eIfrireKdIpv--e~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~-------------------- 479 (698)
T KOG2314|consen 422 GQFSNLEIFRIREKDIPV--EVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVET-------------------- 479 (698)
T ss_pred ceEeeEEEEEeeccCCCc--eeeecchheeeeeeccCCCeEEEEEccccccceeEEEeec--------------------
Confidence 1224455443322111 1112235788999999987777776666544444443332
Q ss_pred CCccccCCCccceEEecccceEEEEEEeccCCeEEEEe-ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 569 GDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV-WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 569 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~-~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
....+.+...+.. ...+.+.|+|.|++++++. .|..|.+.++|+.-..
T Consensus 480 ----~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~------------------------- 528 (698)
T KOG2314|consen 480 ----NIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYAD------------------------- 528 (698)
T ss_pred ----CCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchhh-------------------------
Confidence 0011222222222 3567899999999988764 2567889999987522
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCC
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDC 677 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~ 677 (812)
+..+-..-.-..+.+.|.| .|++++|++.
T Consensus 529 ~k~~~~~eh~~at~veWDP-tGRYvvT~ss 557 (698)
T KOG2314|consen 529 LKDTASPEHFAATEVEWDP-TGRYVVTSSS 557 (698)
T ss_pred hhhccCccccccccceECC-CCCEEEEeee
Confidence 1111111122567789999 7889998876
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-09 Score=112.70 Aligned_cols=209 Identities=18% Similarity=0.200 Sum_probs=153.3
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEc--------------------CCCCcEEEeeCCCce
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS--------------------DLKTALQTVDDPFQL 247 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--------------------~~~~~l~s~~~d~~i 247 (812)
...++|....||.++||+...++..+ .......-++..++.+|. -+...++-|...|.|
T Consensus 4 ~~~~~A~~~~~g~l~iw~t~~~~~~~-e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 4 ALDYFALSTGDGRLRIWDTAKNQLQQ-EFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred hhheEeecCCCCeEEEEEccCceeee-eeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 67899999999999999998876321 122222233444444442 233466777788999
Q ss_pred EEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.+|++..+ +....+ ..|.+.|.++.|+.+- +.|.+++.|+.+..|+..... ..+.+......+..+
T Consensus 83 ~~ys~~~g-------~it~~~st~~h~~~v~~~~~~~~~-~ciyS~~ad~~v~~~~~~~~~----~~~~~~~~~~~~~sl 150 (541)
T KOG4547|consen 83 LLYSVAGG-------EITAKLSTDKHYGNVNEILDAQRL-GCIYSVGADLKVVYILEKEKV----IIRIWKEQKPLVSSL 150 (541)
T ss_pred EEEEecCC-------eEEEEEecCCCCCcceeeeccccc-CceEecCCceeEEEEecccce----eeeeeccCCCccceE
Confidence 99999886 333444 4689999999999887 899999999999999999887 677788888899999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC-----CCEEE-EEeCCCcEEEEecCCC-
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-----EPLIV-SGGDDGCIHVWDLRRF- 398 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~l~-sg~~dg~i~iwd~~~~- 398 (812)
+.+|+++ ++++++ +.|++||+. .+..+.++ .+|.++|++++|... |.+++ +...+..+.+|-++..
T Consensus 151 ~is~D~~-~l~~as--~~ik~~~~~---~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~ 223 (541)
T KOG4547|consen 151 CISPDGK-ILLTAS--RQIKVLDIE---TKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKED 223 (541)
T ss_pred EEcCCCC-EEEecc--ceEEEEEcc---CceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEccc
Confidence 9999998 688877 799999998 55567777 899999999999876 55444 4455667888877652
Q ss_pred CCCCceEEcccCCCCEEE
Q psy4510 399 KKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~ 416 (812)
+.+.....+....-+|+.
T Consensus 224 kkks~~~sl~~~dipv~~ 241 (541)
T KOG4547|consen 224 KKKSLSCSLTVPDIPVTS 241 (541)
T ss_pred ccchhheeeccCCCCeEe
Confidence 222333444444444443
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-11 Score=136.14 Aligned_cols=193 Identities=16% Similarity=0.315 Sum_probs=155.9
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCCCc
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCKRN 296 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~dg~ 296 (812)
+..+-..|.++.-+|...+-++|+.||.+++|....+ .++..++ |. ..|..+.|+.+| +.+..+..||.
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~-------~~v~~~rt~g~-s~vtr~~f~~qG-nk~~i~d~dg~ 2274 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHG-------QQVVCFRTAGN-SRVTRSRFNHQG-NKFGIVDGDGD 2274 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCC-------CeEEEeeccCc-chhhhhhhcccC-CceeeeccCCc
Confidence 3445567777777899999999999999999998875 4454443 44 789999999999 88889999999
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
+.+|.+... .....+.|.....++.|-. . ++++++ .++.+.+||.-......++. ..|.+.+++++
T Consensus 2275 l~l~q~~pk-----~~~s~qchnk~~~Df~Fi~--s-~~~tag~s~d~~n~~lwDtl~~~~~s~v~---~~H~~gaT~l~ 2343 (2439)
T KOG1064|consen 2275 LSLWQASPK-----PYTSWQCHNKALSDFRFIG--S-LLATAGRSSDNRNVCLWDTLLPPMNSLVH---TCHDGGATVLA 2343 (2439)
T ss_pred eeecccCCc-----ceeccccCCccccceeeee--h-hhhccccCCCCCcccchhcccCcccceee---eecCCCceEEE
Confidence 999998732 4566778999999999986 2 567664 47899999987654444444 68999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+-|..++|++||.+|.|++||+| ..+.+++++. +. . ..+|++|+..|.++||++....
T Consensus 2344 ~~P~~qllisggr~G~v~l~D~r---qrql~h~~~~---------~~-~-~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2344 YAPKHQLLISGGRKGEVCLFDIR---QRQLRHTFQA---------LD-T-REYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred EcCcceEEEecCCcCcEEEeehH---HHHHHHHhhh---------hh-h-hheeeccCcccceEEEEccccc
Confidence 99999999999999999999998 4556666654 44 2 3689999999999999998774
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.1e-09 Score=113.44 Aligned_cols=207 Identities=13% Similarity=0.085 Sum_probs=125.9
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-CC--CcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD-CK--RNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~-~d--g~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.|.++|.+. .....+..+...+...+|+|+| ..|+..+ .+ ..|.+|++.++.. ..+....+.+
T Consensus 180 ~l~~~d~~g--------~~~~~l~~~~~~~~~p~wSpDG-~~la~~s~~~~~~~l~~~~l~~g~~-----~~l~~~~g~~ 245 (430)
T PRK00178 180 TLQRSDYDG--------ARAVTLLQSREPILSPRWSPDG-KRIAYVSFEQKRPRIFVQNLDTGRR-----EQITNFEGLN 245 (430)
T ss_pred EEEEECCCC--------CCceEEecCCCceeeeeECCCC-CEEEEEEcCCCCCEEEEEECCCCCE-----EEccCCCCCc
Confidence 366677665 3345555677788999999999 5555444 33 3689999987752 2233333445
Q ss_pred EEEEEcCCCCeEEEEEECCC--eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCC--cEEEEecCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDL--SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDG--CIHVWDLRR 397 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg--~i~iwd~~~ 397 (812)
....|+|+|+.++++.+.+| .|.+||+.++. ...+ ..+........|+|+|+.|+..+ .+| .|.++|+..
T Consensus 246 ~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~----~~~l-t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~ 320 (430)
T PRK00178 246 GAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ----LSRV-TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG 320 (430)
T ss_pred CCeEECCCCCEEEEEEccCCCceEEEEECCCCC----eEEc-ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 67899999997666776666 57888987532 2223 23444566789999998665554 344 466667653
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC--CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD--QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
+. ...+...........|+|++..++++...++ .|.+||+.+... ..+ ... .....
T Consensus 321 ---g~-~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~---------------~~l--t~~-~~~~~ 378 (430)
T PRK00178 321 ---GR-AERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV---------------RIL--TDT-SLDES 378 (430)
T ss_pred ---CC-EEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE---------------EEc--cCC-CCCCC
Confidence 22 2222222233446789999864444443343 477888876632 111 111 11224
Q ss_pred EEEcCCCCCEEEEEeCCC
Q psy4510 476 LHWHPQLPGTIISTANSG 493 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~ 493 (812)
..|+|++..++++...++
T Consensus 379 p~~spdg~~i~~~~~~~g 396 (430)
T PRK00178 379 PSVAPNGTMLIYATRQQG 396 (430)
T ss_pred ceECCCCCEEEEEEecCC
Confidence 589999987777776554
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-08 Score=106.56 Aligned_cols=264 Identities=9% Similarity=0.051 Sum_probs=162.4
Q ss_pred CceEEEEeCCCCCCeEEEecC----CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDC----KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHN 251 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~----dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd 251 (812)
.....++++| ++++|.+... .|.|..|++.........+.........-..++++|++++|+++. .+|.+.+++
T Consensus 37 ~~Ps~l~~~~-~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~ 115 (345)
T PF10282_consen 37 ENPSWLAVSP-DGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFP 115 (345)
T ss_dssp SSECCEEE-T-TSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEe-CCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEE
Confidence 3345588999 8888887754 679999988875211112222332344556799999999999887 589999999
Q ss_pred CCCCCCCCCCCCCceEEc----------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc-cCCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFS----------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTN 320 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~~h~~ 320 (812)
+..... .......+. .......++.|+|+++.++++.-....|.+|++............+ .....
T Consensus 116 l~~~g~---l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~ 192 (345)
T PF10282_consen 116 LDDDGS---LGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGS 192 (345)
T ss_dssp ECTTSE---EEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred ccCCcc---cceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCC
Confidence 987310 001111111 1234578999999994344444445689999998765211111111 23445
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC-ccccee---ecCCcC--CCCeEEEEEcCCCCEEEEEe-CCCcEEEE
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKSCML---TLPNAH--TSDVNVISWNRTEPLIVSGG-DDGCIHVW 393 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~~~--~~~v~~l~~~~~~~~l~sg~-~dg~i~iw 393 (812)
.-+.+.|+|+++.+++++-.++.|.++++.... ....+. .++... ......|+++|+|++|+++. ....|.+|
T Consensus 193 GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf 272 (345)
T PF10282_consen 193 GPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVF 272 (345)
T ss_dssp SEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEE
T ss_pred CCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEE
Confidence 689999999999877888889999999987221 111111 121111 22578899999999766654 56789999
Q ss_pred ecCCC-CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRF-KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++... .....+..+.........+.++|++..++++...++.|.+|++...
T Consensus 273 ~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~ 324 (345)
T PF10282_consen 273 DLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPD 324 (345)
T ss_dssp EECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCC
Confidence 99531 1122334444444557899999998544444456778999987533
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.1e-09 Score=113.44 Aligned_cols=208 Identities=17% Similarity=0.090 Sum_probs=122.8
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE-eCCC--cEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG-DCKR--NIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg-~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.+.++|.... ....+..+...+.+..|+|+| ..|+.. ..++ .|++||+.++.. ..+....+..
T Consensus 199 ~l~i~d~dG~--------~~~~l~~~~~~~~~p~wSPDG-~~La~~s~~~g~~~L~~~dl~tg~~-----~~lt~~~g~~ 264 (448)
T PRK04792 199 QLMIADYDGY--------NEQMLLRSPEPLMSPAWSPDG-RKLAYVSFENRKAEIFVQDIYTQVR-----EKVTSFPGIN 264 (448)
T ss_pred EEEEEeCCCC--------CceEeecCCCcccCceECCCC-CEEEEEEecCCCcEEEEEECCCCCe-----EEecCCCCCc
Confidence 4666676552 224455567788899999999 555544 3333 588889887652 1122222334
Q ss_pred EEEEEcCCCCeEEEEEECCCe--EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCc--EEEEecCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGC--IHVWDLRR 397 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~--i~iwd~~~ 397 (812)
...+|+|+|+.++++.+.+|. |.++|+.++. ...+ ..+.......+|+|+|+.|+..+ .+|. |.++|+..
T Consensus 265 ~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~----~~~l-t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~ 339 (448)
T PRK04792 265 GAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA----LTRI-TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS 339 (448)
T ss_pred CCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC----eEEC-ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence 578999999987777777775 6677776432 2333 33445567789999999665544 3444 55556642
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE--EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI--ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v--~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
++ ...+...........|+|++..++++...++.. .++|+..... ..+ ... .....
T Consensus 340 ---g~-~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~---------------~~l--t~~-~~d~~ 397 (448)
T PRK04792 340 ---GK-VSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM---------------QVL--TST-RLDES 397 (448)
T ss_pred ---CC-EEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe---------------EEc--cCC-CCCCC
Confidence 22 222222223334678999986554544445544 4466655421 111 111 11224
Q ss_pred EEEcCCCCCEEEEEeCCCe
Q psy4510 476 LHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~~ 494 (812)
..|+|++..++++...++.
T Consensus 398 ps~spdG~~I~~~~~~~g~ 416 (448)
T PRK04792 398 PSVAPNGTMVIYSTTYQGK 416 (448)
T ss_pred ceECCCCCEEEEEEecCCc
Confidence 4799999888777766654
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-06 Score=87.25 Aligned_cols=366 Identities=12% Similarity=0.046 Sum_probs=196.0
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc--C--CCCeEEEE----EcC-CCCEEEEEeCCCcEEEEecCC
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--H--TSDVNVIS----WNR-TEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~--~~~v~~l~----~~~-~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.+.+|+.++++.+ |.|.+||..+.+..+.-..++.. . ..-+.-.. |++ +|.+++..+. |...|.+..
T Consensus 274 ~nsDGkrIvFq~~--GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~- 349 (668)
T COG4946 274 ANSDGKRIVFQNA--GDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPW- 349 (668)
T ss_pred cCCCCcEEEEecC--CcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCC-
Confidence 4567887665544 78999998754322211111111 0 01111111 222 5678887774 556666553
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
.+ .... -+|.+.|.-..+.-++. -++.|..|| .+-++|..+. ........-+.|.++
T Consensus 350 --~~-~~iq-v~~~~~VrY~r~~~~~e-~~vigt~dgD~l~iyd~~~~-----------------e~kr~e~~lg~I~av 407 (668)
T COG4946 350 --DG-YSIQ-VGKKGGVRYRRIQVDPE-GDVIGTNDGDKLGIYDKDGG-----------------EVKRIEKDLGNIEAV 407 (668)
T ss_pred --CC-eeEE-cCCCCceEEEEEccCCc-ceEEeccCCceEEEEecCCc-----------------eEEEeeCCccceEEE
Confidence 12 2222 34677788888877754 788888888 8999999988 445555556789999
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDN 556 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (812)
..+|++. .+..+++.+.+|-.--......+......+-|+.++|||+ +..+|-+-...-..+.+++.++..++
T Consensus 408 ~vs~dGK--~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~n--sr~iAYafP~gy~tq~Iklydm~~~K--- 480 (668)
T COG4946 408 KVSPDGK--KVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPN--SRWIAYAFPEGYYTQSIKLYDMDGGK--- 480 (668)
T ss_pred EEcCCCc--EEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCC--ceeEEEecCcceeeeeEEEEecCCCe---
Confidence 9999954 5555666766664332222333334445568999999999 67777665544444455544422211
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEee-----cCcceEEEEeccccccccCCccc-
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW-----GEVGKVGIWDLKTALQTVDDPFQ- 630 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~-----~~dg~I~iwd~~~~~~~~~~~~~- 630 (812)
........+.-.+-+|.|++++|..-+. +.|..+.-+....-.+.+-.+..
T Consensus 481 -----------------------iy~vTT~ta~DfsPaFD~d~ryLYfLs~RsLdPs~Drv~fnf~f~~vskPylv~L~~ 537 (668)
T COG4946 481 -----------------------IYDVTTPTAYDFSPAFDPDGRYLYFLSARSLDPSNDRVIFNFSFQRVSKPYLVVLGR 537 (668)
T ss_pred -----------------------EEEecCCcccccCcccCCCCcEEEEEeccccCCCCCeeEEEEEEeeeccceEEEecC
Confidence 0011111222334578889987765421 22333333333222111100000
Q ss_pred --ccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeec
Q psy4510 631 --LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGD 708 (812)
Q Consensus 631 --~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs 708 (812)
........ ....+..--..+.+-...+.-+-.-+ ..-.-+++-.+|.|.++.+.-....+ .+.-.+-
T Consensus 538 g~~sP~~q~p--~~~~~ea~e~dle~ie~r~eP~pVee-~dY~sI~~lk~~killfs~pi~Gefs--------~yy~gq~ 606 (668)
T COG4946 538 GYYSPFNQPP--DEANSEAGEVDLEGIEDRVEPFPVEE-GDYRSIAGLKNGKILLFSYPIHGEFS--------QYYWGQP 606 (668)
T ss_pred CCCChhhcCc--hhcCccccceehhhhcccccccccCc-cceeEeeecCCCeEEEEEeeccchhh--------hhhcCCC
Confidence 00000000 00000011111222222222222233 23345556667777777653211111 1222244
Q ss_pred CCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 709 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 709 ~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.-|.+.+||+++.+. .. -...|.++..|+||+++|+ -.||.++++++...+
T Consensus 607 ~kG~l~~ydletkk~-----~e---~k~nvss~rlS~D~s~ilv--k~d~kl~~f~vekkP 657 (668)
T COG4946 607 EKGRLEKYDLETKKV-----EE---YKDNVSSFRLSSDGSKILV--KLDGKLRLFDVEKKP 657 (668)
T ss_pred ccceEEEEecchhhH-----HH---HhcccceEEEcCCCCEEEE--EeCCeEEEEecccCc
Confidence 568899999987652 12 2357899999999996555 899999999998743
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-07 Score=92.11 Aligned_cols=259 Identities=9% Similarity=0.098 Sum_probs=170.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEec---CCCcEEEEccCC--CCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCce
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGD---CKRNIHIWTPRE--AGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQL 247 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~---~dg~v~iwd~~~--~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i 247 (812)
.+.+.++-++|+| +++.|.++. .+|.|--|.++. +.........+.++. -..+++++++++|+++. ..|.|
T Consensus 37 ~~~~nptyl~~~~-~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~--p~yvsvd~~g~~vf~AnY~~g~v 113 (346)
T COG2706 37 AELGNPTYLAVNP-DQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSP--PCYVSVDEDGRFVFVANYHSGSV 113 (346)
T ss_pred cccCCCceEEECC-CCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCC--CeEEEECCCCCEEEEEEccCceE
Confidence 4557788899999 999998874 357888887775 332222223333333 27899999999999887 57889
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCc----------EEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceecccccc
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTE----------GFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~----------v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
.++-++... ...+...+..|.+. +....+.|++ ++|++.+- --.|.+|++..+.........+
T Consensus 114 ~v~p~~~dG----~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~-~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v- 187 (346)
T COG2706 114 SVYPLQADG----SLQPVVQVVKHTGSGPHERQESPHVHSANFTPDG-RYLVVPDLGTDRIFLYDLDDGKLTPADPAEV- 187 (346)
T ss_pred EEEEcccCC----ccccceeeeecCCCCCCccccCCccceeeeCCCC-CEEEEeecCCceEEEEEcccCcccccccccc-
Confidence 999986631 22333333345554 8899999998 67666653 3469999999765322222222
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC-Ccccce---eecCCc--CCCCeEEEEEcCCCCEEEEEeC-CCc
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI-NTKSCM---LTLPNA--HTSDVNVISWNRTEPLIVSGGD-DGC 389 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~---~~~~~~--~~~~v~~l~~~~~~~~l~sg~~-dg~ 389 (812)
.....-+.|.|+|+++...+.+--+++|.+|..... ....++ .+++.. .......|..+++|++|+++.+ ...
T Consensus 188 ~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~ds 267 (346)
T COG2706 188 KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDS 267 (346)
T ss_pred CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCe
Confidence 344567899999999966666777999999998753 111122 222222 2445778899999998888754 347
Q ss_pred EEEEecCCCCCCCceEE---cccCCCCEEEEEEccCCCcEEEEEEC-CCCEEEEEcCCC
Q psy4510 390 IHVWDLRRFKKGSSVAT---FKHHTAPVTTVEWHPTESSTFASGGA-DDQIALWDLAVE 444 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~iwd~~~~ 444 (812)
|.+|.+... +..+.. ...+...-....++|.+. +|+++.. +..|.+|.....
T Consensus 268 I~~f~V~~~--~g~L~~~~~~~teg~~PR~F~i~~~g~-~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 268 IAVFSVDPD--GGKLELVGITPTEGQFPRDFNINPSGR-FLIAANQKSDNITVFERDKE 323 (346)
T ss_pred EEEEEEcCC--CCEEEEEEEeccCCcCCccceeCCCCC-EEEEEccCCCcEEEEEEcCC
Confidence 888888752 222322 223344457888999885 5555554 567999987765
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-09 Score=111.23 Aligned_cols=194 Identities=16% Similarity=0.208 Sum_probs=148.0
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEe------cC-------------CCCCEEEEEeC
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW------SS-------------TEPGVLATGDC 293 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------sp-------------~~~~~l~sg~~ 293 (812)
|-..++|....||.+++|+...+.... ...|...+. +...++.| +| .+...++-|..
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~-e~~p~~~~s---~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~ 78 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQ-EFAPIASLS---GTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTP 78 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeee-eeccchhcc---CcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecC
Confidence 556789999999999999998752110 122332222 33344444 22 12247888999
Q ss_pred CCcEEEEeCCCCCcceeccccc--cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 294 KRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
.|.|.++++..++ ....+ -.|.+.|+++.++.+-. .|.|++.|+.+..|+... ...+... ......+.+
T Consensus 79 ~g~v~~ys~~~g~----it~~~st~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~---~~~~~~~-~~~~~~~~s 149 (541)
T KOG4547|consen 79 QGSVLLYSVAGGE----ITAKLSTDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKE---KVIIRIW-KEQKPLVSS 149 (541)
T ss_pred CccEEEEEecCCe----EEEEEecCCCCCcceeeecccccC-ceEecCCceeEEEEeccc---ceeeeee-ccCCCccce
Confidence 9999999999887 33333 46899999999998887 699999999999999973 3333333 667788999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC-----CCcEEEEEECCCCEEEEEcCCC
Q psy4510 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT-----ESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 372 l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++.+|++..+++++ +.|++||+. +++.+.+|.+|.++|.+++|--. |..+|.+...+.-+.+|-+...
T Consensus 150 l~is~D~~~l~~as--~~ik~~~~~---~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 150 LCISPDGKILLTAS--RQIKVLDIE---TKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred EEEcCCCCEEEecc--ceEEEEEcc---CceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence 99999999999887 579999998 68899999999999999999876 5567777777788889988764
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.2e-07 Score=87.45 Aligned_cols=286 Identities=12% Similarity=0.106 Sum_probs=176.5
Q ss_pred CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE-C--CCeEEEEECCCCCcccceeecCCcCCCCeE
Q psy4510 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-V--DLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 370 (812)
+.-|++|++.+..... ....+....+.++-|+|+|+++. |.++- . +|.|.-|.+...+..-...........+-+
T Consensus 15 s~gI~v~~ld~~~g~l-~~~~~v~~~~nptyl~~~~~~~~-LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGEL-SLLQLVAELGNPTYLAVNPDQRH-LYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCccccc-chhhhccccCCCceEEECCCCCE-EEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCe
Confidence 4679999998544311 23334456778899999999986 55543 3 578888877632111111111112233348
Q ss_pred EEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccCCCC----------EEEEEEccCCCcEEEEEEC-CCCEEE
Q psy4510 371 VISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHTAP----------VTTVEWHPTESSTFASGGA-DDQIAL 438 (812)
Q Consensus 371 ~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~----------v~~v~~~p~~~~~l~s~~~-dg~v~i 438 (812)
-+++++++++++++.. .|.|.++-++....-..+..+..|.+. +....+.|++ ++|++..- -.+|.+
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~-~~l~v~DLG~Dri~~ 171 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDG-RYLVVPDLGTDRIFL 171 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCC-CEEEEeecCCceEEE
Confidence 8999999998877764 589999999763323333333345555 8889999997 46665543 346999
Q ss_pred EEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE---------E
Q psy4510 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL---------F 509 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 509 (812)
|++..++.... ..... ........|.|||+++...+.+.-++....+..+....... .
T Consensus 172 y~~~dg~L~~~------------~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~ 238 (346)
T COG2706 172 YDLDDGKLTPA------------DPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPE 238 (346)
T ss_pred EEcccCccccc------------ccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCcc
Confidence 99996543211 01111 22345788999999988888877666544444443211111 1
Q ss_pred eecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccce
Q psy4510 510 IHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGC 589 (812)
Q Consensus 510 ~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 589 (812)
...+......+..+|+ +.++-.++.+.+.+..+.+...... ..+......+...
T Consensus 239 dF~g~~~~aaIhis~d--GrFLYasNRg~dsI~~f~V~~~~g~------------------------L~~~~~~~teg~~ 292 (346)
T COG2706 239 DFTGTNWAAAIHISPD--GRFLYASNRGHDSIAVFSVDPDGGK------------------------LELVGITPTEGQF 292 (346)
T ss_pred ccCCCCceeEEEECCC--CCEEEEecCCCCeEEEEEEcCCCCE------------------------EEEEEEeccCCcC
Confidence 1234457788899999 7788888887777777776652111 0112222233334
Q ss_pred EEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 590 INRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 590 v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
-....+++.|++|+++- -++..|.+|.+....
T Consensus 293 PR~F~i~~~g~~Liaa~-q~sd~i~vf~~d~~T 324 (346)
T COG2706 293 PRDFNINPSGRFLIAAN-QKSDNITVFERDKET 324 (346)
T ss_pred CccceeCCCCCEEEEEc-cCCCcEEEEEEcCCC
Confidence 56788999999999883 334568888886543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.9e-09 Score=101.31 Aligned_cols=262 Identities=13% Similarity=0.186 Sum_probs=176.7
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC-cccccccccCCCC------------CCeeeeeEcCCCC--cEE
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-AWQVDQKPLGGHT------------NSAEDLQWSDLKT--ALQ 239 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~-~~~~~~~~l~~h~------------~~V~~l~~s~~~~--~l~ 239 (812)
..+.|+++.|.. .|.+||||...|+|.+|.-.... ........+++|. ..|.++.|..++. .++
T Consensus 25 ead~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL 103 (460)
T COG5170 25 EADKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL 103 (460)
T ss_pred ccceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence 346799999999 99999999999999999655432 1111233456664 4688899887664 566
Q ss_pred EeeCCCceEEeeCCCCC------------------CCCCC-----------------CCCceEE-cCCCCcEEEEEecCC
Q psy4510 240 TVDDPFQLAEHNKKRGK------------------GPGIP-----------------TPPLFSF-SGHLTEGFAMDWSST 283 (812)
Q Consensus 240 s~~~d~~i~vwd~~~~~------------------~~~~~-----------------~~~~~~~-~~h~~~v~~l~~sp~ 283 (812)
..+.|.+|++|.+.... ++... ..|.+.. ..|.-.+.++.|+.+
T Consensus 104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD 183 (460)
T COG5170 104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD 183 (460)
T ss_pred EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence 66789999999875530 00000 0111112 456777889999998
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCccee----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc---c
Q psy4510 284 EPGVLATGDCKRNIHIWTPREAGAWQV----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK---S 356 (812)
Q Consensus 284 ~~~~l~sg~~dg~i~vwd~~~~~~~~~----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---~ 356 (812)
. ..+++++ |=.|.+|++........ ....+..-...|++..|+|...++|.-.+..|.|++-|+|....- .
T Consensus 184 ~-et~lSaD-dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~ 261 (460)
T COG5170 184 K-ETLLSAD-DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSK 261 (460)
T ss_pred h-heeeecc-ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCch
Confidence 7 5666665 67899999876543111 111222234578899999998888999999999999999942110 0
Q ss_pred cee--e-------cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC------------CCE-
Q psy4510 357 CML--T-------LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT------------APV- 414 (812)
Q Consensus 357 ~~~--~-------~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~------------~~v- 414 (812)
.+. . +...-...|..+.|+++|+++++-+. -+|+|||.+. ...++.+..-|. ..|
T Consensus 262 klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm--~k~pikTi~~h~~l~~~l~d~YEnDaif 338 (460)
T COG5170 262 KLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNM--AKNPIKTIPMHCDLMDELNDVYENDAIF 338 (460)
T ss_pred hhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccc--ccCCceeechHHHHHHHHHhhhhcccee
Confidence 000 0 00122356788999999999988654 5799999997 567888876552 233
Q ss_pred --EEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 415 --TTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 415 --~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
..+.|+.+. ..+++|+..+..-++-..+
T Consensus 339 dkFeisfSgd~-~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 339 DKFEISFSGDD-KHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred eeEEEEecCCc-ccccccccccceeeecccc
Confidence 357788875 5788999888887776443
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-07 Score=96.85 Aligned_cols=324 Identities=13% Similarity=0.228 Sum_probs=179.2
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-----------CCc
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-----------DGC 389 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----------dg~ 389 (812)
.-+-+.|||.|. +|+|-.. .-|.+|--. .-..+..+ .| ..|.-+.|||..++|+|=+. ...
T Consensus 212 Tetyv~wSP~GT-YL~t~Hk-~GI~lWGG~---~f~r~~RF--~H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~ 283 (698)
T KOG2314|consen 212 TETYVRWSPKGT-YLVTFHK-QGIALWGGE---SFDRIQRF--YH-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ 283 (698)
T ss_pred eeeeEEecCCce-EEEEEec-cceeeecCc---cHHHHHhc--cC-CCceeeecCCccceEEEecCCccccCcccCCCce
Confidence 346789999999 4777766 458889654 22333443 34 45899999999999998653 257
Q ss_pred EEEEecCCCCCCCceEEcccC---CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 390 IHVWDLRRFKKGSSVATFKHH---TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h---~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
++|||+++ +.....|... ...-.-+.||-++ .++|--..+ .|.||+...... +-.
T Consensus 284 l~IWDI~t---G~lkrsF~~~~~~~~~WP~frWS~Dd-Ky~Arm~~~-sisIyEtpsf~l-----------------ld~ 341 (698)
T KOG2314|consen 284 LIIWDIAT---GLLKRSFPVIKSPYLKWPIFRWSHDD-KYFARMTGN-SISIYETPSFML-----------------LDK 341 (698)
T ss_pred EEEEEccc---cchhcceeccCCCccccceEEeccCC-ceeEEeccc-eEEEEecCceee-----------------ecc
Confidence 99999994 5555555442 2222346799886 588877764 599998765421 111
Q ss_pred ec-CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc--ccEE-eecCCC--------CeeE--EEEcCCCCCeEEE
Q psy4510 467 HL-GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS--QLLF-IHLGQK--------EIKE--LHWHPQLPGTIIS 532 (812)
Q Consensus 467 ~~-~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~--------~i~~--~~~~p~~~~~~i~ 532 (812)
.. .-..|..+.|+|... +..||....... +... ..+... .|.. +.|..+ |..++
T Consensus 342 Kslki~gIr~FswsP~~~----------llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~--gdyLc 409 (698)
T KOG2314|consen 342 KSLKISGIRDFSWSPTSN----------LLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKS--GDYLC 409 (698)
T ss_pred cccCCccccCcccCCCcc----------eEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccC--CcEEE
Confidence 11 123688999999843 223333222111 1111 111111 2222 334444 33333
Q ss_pred eeCCC------ceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEe
Q psy4510 533 TANSG------FNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 533 ~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
.--+. ...+..+..-. ................|...+|-|.|+.+++-+
T Consensus 410 vkvdR~tK~~~~g~f~n~eIfr-------------------------ireKdIpve~velke~vi~FaWEP~gdkF~vi~ 464 (698)
T KOG2314|consen 410 VKVDRHTKSKVKGQFSNLEIFR-------------------------IREKDIPVEVVELKESVIAFAWEPHGDKFAVIS 464 (698)
T ss_pred EEEEeeccccccceEeeEEEEE-------------------------eeccCCCceeeecchheeeeeeccCCCeEEEEE
Confidence 22110 00001110000 000011112233455788899999999887764
Q ss_pred e-cCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 607 W-GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 607 ~-~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+ ....++.+|.+.+... ..+++..+.. ...+.+.|+| .|++++.+..
T Consensus 465 g~~~k~tvsfY~~e~~~~---------------------~~~lVk~~dk--~~~N~vfwsP-kG~fvvva~l-------- 512 (698)
T KOG2314|consen 465 GNTVKNTVSFYAVETNIK---------------------KPSLVKELDK--KFANTVFWSP-KGRFVVVAAL-------- 512 (698)
T ss_pred ccccccceeEEEeecCCC---------------------chhhhhhhcc--cccceEEEcC-CCcEEEEEEe--------
Confidence 3 2345688888875321 1123333432 3567788888 6766665532
Q ss_pred cCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeecc------CCc
Q psy4510 686 PREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV------DRS 759 (812)
Q Consensus 686 ~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~------Dg~ 759 (812)
+|..|.+..+|..-... ..+-..-....+.+.|-|.|+ |++|++. |.-
T Consensus 513 ---------------------~s~~g~l~F~D~~~a~~----k~~~~~eh~~at~veWDPtGR-YvvT~ss~wrhk~d~G 566 (698)
T KOG2314|consen 513 ---------------------VSRRGDLEFYDTDYADL----KDTASPEHFAATEVEWDPTGR-YVVTSSSSWRHKVDNG 566 (698)
T ss_pred ---------------------cccccceEEEecchhhh----hhccCccccccccceECCCCC-EEEEeeehhhhccccc
Confidence 23456677777654321 222212224567899999999 7888875 455
Q ss_pred eEEeeecCcc
Q psy4510 760 NRIGARRDML 769 (812)
Q Consensus 760 i~iWd~~~~~ 769 (812)
-+||+++...
T Consensus 567 Yri~tfqGrl 576 (698)
T KOG2314|consen 567 YRIFTFQGRL 576 (698)
T ss_pred eEEEEeecHH
Confidence 6777776544
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-08 Score=92.60 Aligned_cols=247 Identities=12% Similarity=0.092 Sum_probs=163.0
Q ss_pred EEEeCCC----CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-cCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 181 AMDWSST----EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-SDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 181 ~~~~sp~----~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|-|. .-.+||.||.-|...+|.+.+.+. ..+....|...|+-+.= ....-.+..++.|.++++.++..+
T Consensus 72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~---h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~ 148 (344)
T KOG4532|consen 72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTNDG---HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGD 148 (344)
T ss_pred cccccchHhhccccEEEeccccceeeeecccCccc---ceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecC
Confidence 3555552 456899999999999999886542 44455555554443221 223345777889999999998875
Q ss_pred CCCCCCCCCceEEcCCCC--cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFSGHLT--EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
. .+. ..|.. .+.++++++++ .++++.+....|..|.+...+..... ......+..-.+..|+....
T Consensus 149 s-----~~~----~~h~~~~~~ns~~~snd~-~~~~~Vgds~~Vf~y~id~~sey~~~-~~~a~t~D~gF~~S~s~~~~- 216 (344)
T KOG4532|consen 149 S-----NKF----AVHNQNLTQNSLHYSNDP-SWGSSVGDSRRVFRYAIDDESEYIEN-IYEAPTSDHGFYNSFSENDL- 216 (344)
T ss_pred c-----ccc----eeeccccceeeeEEcCCC-ceEEEecCCCcceEEEeCCccceeee-eEecccCCCceeeeeccCcc-
Confidence 1 121 12332 37899999998 78888888899999999877643222 23333444557788998887
Q ss_pred EEEEEECCCeEEEEECCCCCcccce-eecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceEEc---
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCM-LTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATF--- 407 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~--- 407 (812)
.||++..||++.|||+|...+.... ......|.+.+..+.|++.|. +|+..-.-+.+.+.|+|+...-+.+...
T Consensus 217 ~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~ 296 (344)
T KOG4532|consen 217 QFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDV 296 (344)
T ss_pred eEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccc
Confidence 6999999999999999965443221 122356899999999999876 5555555678999999975543333222
Q ss_pred -ccCC-CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 408 -KHHT-APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 408 -~~h~-~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..|. ..|..-.|+..++.. .+.+.+ .+.-|++...
T Consensus 297 ~~~~~tq~ifgt~f~~~n~s~-~v~~e~-~~ae~ni~sr 333 (344)
T KOG4532|consen 297 ERKHNTQHIFGTNFNNENESN-DVKNEL-QGAEYNILSR 333 (344)
T ss_pred cccccccccccccccCCCccc-ccccch-hhheeecccc
Confidence 2233 347777888776533 333332 3555665544
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.5e-10 Score=113.16 Aligned_cols=217 Identities=14% Similarity=0.290 Sum_probs=152.6
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+..+.||...|++++--.+.+.+++++.|+++++|.++..........+.+++..|+.+|..+.|-.+. +.+++ .|
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~l-r~i~S--cD 803 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADL-RSIAS--CD 803 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecc-ceeee--cc
Confidence 5567889999999999888888999999999999999986433333446888999999999999999876 56665 47
Q ss_pred CcEEEEeCCCCCcceeccccc--cCCCCCEEEEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecC--CcCCCC
Q psy4510 295 RNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLP--NAHTSD 368 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~ 368 (812)
|-|++||.--+.. ...+ ....+.+..+..-++ ..-+++.|+...+|+++|.|...- .+-..+. .+...-
T Consensus 804 ~giHlWDPFigr~----Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~-~~E~kVcna~~Pna~ 878 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRL----LAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEW-TCELKVCNAPGPNAL 878 (1034)
T ss_pred Ccceeecccccch----hHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccc-eeeEEeccCCCCchh
Confidence 8999999876652 2111 111222333333333 333455558899999999986532 2222221 233466
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE-EEcCCC
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL-WDLAVE 444 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i-wd~~~~ 444 (812)
+.+++..+.|+.+++|-.+|.|.+.|.|+ +..+..++.-.-....++ .|.+ +.|+....|.++.+ |....+
T Consensus 879 ~R~iaVa~~GN~lAa~LSnGci~~LDaR~---G~vINswrpmecdllqla-apsd-q~L~~saldHslaVnWhaldg 950 (1034)
T KOG4190|consen 879 TRAIAVADKGNKLAAALSNGCIAILDARN---GKVINSWRPMECDLLQLA-APSD-QALAQSALDHSLAVNWHALDG 950 (1034)
T ss_pred eeEEEeccCcchhhHHhcCCcEEEEecCC---CceeccCCcccchhhhhc-Cchh-HHHHhhcccceeEeeehhcCC
Confidence 89999999999999999999999999994 666666654444444443 3443 57777777888888 765544
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=2e-07 Score=110.49 Aligned_cols=253 Identities=13% Similarity=0.109 Sum_probs=160.8
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc---------CCCCCCeeeeeEcCCCCcEEEee-CCCceEE
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---------GGHTNSAEDLQWSDLKTALQTVD-DPFQLAE 249 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l---------~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~v 249 (812)
..+++++.+++++++-+.++.|++||.........-...- .++-..-..+++.+++..|..+. ..+.|++
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~ 650 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE 650 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence 3477877456777787888999999976432100000000 01123457899999888776665 4577999
Q ss_pred eeCCCCCCCCCCCCCceEEcCC-----------------CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGH-----------------LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD- 311 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h-----------------~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~- 311 (812)
+|..++ .+.++.+- -..-..++++|++..++++.+.++.|++|+..++......
T Consensus 651 id~~~~--------~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G 722 (1057)
T PLN02919 651 IDFVNE--------TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSG 722 (1057)
T ss_pred EecCCC--------EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEec
Confidence 988763 22222210 0123579999965366777777899999998765321000
Q ss_pred ---cccccC------CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc----------eeecC-------CcC
Q psy4510 312 ---QKPLVG------HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC----------MLTLP-------NAH 365 (812)
Q Consensus 312 ---~~~~~~------h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------~~~~~-------~~~ 365 (812)
.....+ .-.....|+++|+++.++++-+.++.|++||+.++..... +..+. ...
T Consensus 723 ~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~ 802 (1057)
T PLN02919 723 DGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVL 802 (1057)
T ss_pred CCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhh
Confidence 000111 1124567999999987788888889999999875431100 00000 001
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--------------CCCCEEEEEEccCCCcEEEEEE
Q psy4510 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--------------HTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--------------h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
-.....++++++|+++++-+.++.|++||... + .+.++.+ .-.....|+++++| +++++-+
T Consensus 803 l~~P~Gvavd~dG~LYVADs~N~rIrviD~~t---g-~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG-~lyVaDt 877 (1057)
T PLN02919 803 LQHPLGVLCAKDGQIYVADSYNHKIKKLDPAT---K-RVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENG-RLFVADT 877 (1057)
T ss_pred ccCCceeeEeCCCcEEEEECCCCEEEEEECCC---C-eEEEEeccCCcCCCCCcccccccCCceEEEEeCCC-CEEEEEC
Confidence 11246889999999888888999999999863 2 2222221 12246789999987 5888888
Q ss_pred CCCCEEEEEcCCCC
Q psy4510 432 ADDQIALWDLAVER 445 (812)
Q Consensus 432 ~dg~v~iwd~~~~~ 445 (812)
.+++|++||+.+..
T Consensus 878 ~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 878 NNSLIRYLDLNKGE 891 (1057)
T ss_pred CCCEEEEEECCCCc
Confidence 89999999998764
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-07 Score=87.37 Aligned_cols=198 Identities=9% Similarity=-0.029 Sum_probs=136.4
Q ss_pred CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc
Q psy4510 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP 314 (812)
Q Consensus 235 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~ 314 (812)
-.+||.|+..|...+|...+. ....+....|...|.-+.=.-+....+..++.|.++++.++..+.. .
T Consensus 84 c~~la~gG~~g~fd~~~~~tn------~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~------~ 151 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTN------DGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN------K 151 (344)
T ss_pred ccEEEeccccceeeeecccCc------ccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc------c
Confidence 347899999999999998874 2344444445554433332223334577788889999998876542 1
Q ss_pred ccCCCC--CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy4510 315 LVGHTN--SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392 (812)
Q Consensus 315 ~~~h~~--~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i 392 (812)
+.-|.. .+..+.++++++ ++++.+....|..|.+....... ...........-.+.+|+.....+|++..||++.|
T Consensus 152 ~~~h~~~~~~ns~~~snd~~-~~~~Vgds~~Vf~y~id~~sey~-~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I 229 (344)
T KOG4532|consen 152 FAVHNQNLTQNSLHYSNDPS-WGSSVGDSRRVFRYAIDDESEYI-ENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAI 229 (344)
T ss_pred ceeeccccceeeeEEcCCCc-eEEEecCCCcceEEEeCCcccee-eeeEecccCCCceeeeeccCcceEEEEecCCcEEE
Confidence 222333 388999999999 78899999999999987543222 22222344455678899999999999999999999
Q ss_pred EecCCCCCCC--ceEEcccCCCCEEEEEEccCCCc-EEEEEECCCCEEEEEcCCCCc
Q psy4510 393 WDLRRFKKGS--SVATFKHHTAPVTTVEWHPTESS-TFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 393 wd~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~v~iwd~~~~~~ 446 (812)
||+|.....- .-.+-..|.+.+..+.|+|-|.. +|...-.-+.+.+-|++..+.
T Consensus 230 ~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~ 286 (344)
T KOG4532|consen 230 YDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVN 286 (344)
T ss_pred EEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCce
Confidence 9999744321 12233458999999999986643 333333457899999998864
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.6e-06 Score=81.38 Aligned_cols=251 Identities=14% Similarity=0.119 Sum_probs=157.0
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC--eeeeeEcCCCCcEEEeeC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS--AEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~--V~~l~~s~~~~~l~s~~~ 243 (812)
.+++..+.||...-.-+ .++.-.....+|.=.||.++-.. +-+..|++- -.+=-.+.||+.++- +.
T Consensus 218 FeK~vdl~~~vS~PmIV-----~~RvYFlsD~eG~GnlYSvdldG------kDlrrHTnFtdYY~R~~nsDGkrIvF-q~ 285 (668)
T COG4946 218 FEKFVDLDGNVSSPMIV-----GERVYFLSDHEGVGNLYSVDLDG------KDLRRHTNFTDYYPRNANSDGKRIVF-QN 285 (668)
T ss_pred eeeeeecCCCcCCceEE-----cceEEEEecccCccceEEeccCC------chhhhcCCchhccccccCCCCcEEEE-ec
Confidence 34555555665443222 23333333445655666554322 234444432 122233467887654 46
Q ss_pred CCceEEeeCCCCCCCCCCCC-CceEEcCCC---CcEEEEE-ecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTP-PLFSFSGHL---TEGFAMD-WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~-~~~~~~~h~---~~v~~l~-~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
.|.|.+||..+.....+... |+..-.... .+..-+. |++....+++..+. |...|.+...+- ....+|
T Consensus 286 ~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~------~iqv~~ 358 (668)
T COG4946 286 AGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGY------SIQVGK 358 (668)
T ss_pred CCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCe------eEEcCC
Confidence 68899999887522211111 111111001 1111222 55544378888876 788888776553 122356
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.+.|.-..+..+.+ -++.|..|| .+-|+|.+++. +..+ ...-+.|.++..+++|++++.+.....|.+.|+.+
T Consensus 359 ~~~VrY~r~~~~~e-~~vigt~dgD~l~iyd~~~~e----~kr~-e~~lg~I~av~vs~dGK~~vvaNdr~el~vididn 432 (668)
T COG4946 359 KGGVRYRRIQVDPE-GDVIGTNDGDKLGIYDKDGGE----VKRI-EKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDN 432 (668)
T ss_pred CCceEEEEEccCCc-ceEEeccCCceEEEEecCCce----EEEe-eCCccceEEEEEcCCCcEEEEEcCceEEEEEEecC
Confidence 77788888888777 488899999 99999998543 3333 45567899999999999999999999999999984
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC----CEEEEEcCCCC
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD----QIALWDLAVER 445 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg----~v~iwd~~~~~ 445 (812)
+.....-+...+-|+.+.|||+. +++|-+--+| .|+++|+...+
T Consensus 433 ---gnv~~idkS~~~lItdf~~~~ns-r~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 433 ---GNVRLIDKSEYGLITDFDWHPNS-RWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred ---CCeeEecccccceeEEEEEcCCc-eeEEEecCcceeeeeEEEEecCCCe
Confidence 44444445567889999999986 6777665444 68999998863
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-06 Score=87.91 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=63.2
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEecCCCCCCCceEEcccCC
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG----------DDGCIHVWDLRRFKKGSSVATFKHHT 411 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~h~ 411 (812)
++|.+.|..+ .+.+..+..+.... .+ ++|+++.|+++. .+..|.+||..+ .+.+..+....
T Consensus 27 ~~v~ViD~~~---~~v~g~i~~G~~P~--~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t---~~~~~~i~~p~ 97 (352)
T TIGR02658 27 TQVYTIDGEA---GRVLGMTDGGFLPN--PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT---HLPIADIELPE 97 (352)
T ss_pred ceEEEEECCC---CEEEEEEEccCCCc--ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECcc---CcEEeEEccCC
Confidence 8999999984 33344443333333 24 899999665554 478999999984 55666555322
Q ss_pred -------CCEEEEEEccCCCcEEEEEE-C-CCCEEEEEcCCCC
Q psy4510 412 -------APVTTVEWHPTESSTFASGG-A-DDQIALWDLAVER 445 (812)
Q Consensus 412 -------~~v~~v~~~p~~~~~l~s~~-~-dg~v~iwd~~~~~ 445 (812)
..-..++++|+|. +|+... . +..|.+.|+...+
T Consensus 98 ~p~~~~~~~~~~~~ls~dgk-~l~V~n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 98 GPRFLVGTYPWMTSLTPDNK-TLLFYQFSPSPAVGVVDLEGKA 139 (352)
T ss_pred CchhhccCccceEEECCCCC-EEEEecCCCCCEEEEEECCCCc
Confidence 2234788999985 555444 3 7899999999874
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.8e-06 Score=84.32 Aligned_cols=103 Identities=7% Similarity=-0.061 Sum_probs=69.5
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCCc-
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPNA- 364 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~- 364 (812)
++|.+.|..+.+. ...+..-..+ ..+ ++|+++.+.++.+ .+..|.+||+.+.. .+..+..+
T Consensus 27 ~~v~ViD~~~~~v----~g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~---~~~~i~~p~ 97 (352)
T TIGR02658 27 TQVYTIDGEAGRV----LGMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL---PIADIELPE 97 (352)
T ss_pred ceEEEEECCCCEE----EEEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc---EEeEEccCC
Confidence 8899999988762 2222221111 224 9999998777777 78999999999544 33333211
Q ss_pred -----CCCCeEEEEEcCCCCEEEEEe-C-CCcEEEEecCCCCCCCceEEccc
Q psy4510 365 -----HTSDVNVISWNRTEPLIVSGG-D-DGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 365 -----~~~~v~~l~~~~~~~~l~sg~-~-dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
.......++++|+|++|+... . +..|.+.|+. .++.+..+.-
T Consensus 98 ~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~---~~kvv~ei~v 146 (352)
T TIGR02658 98 GPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE---GKAFVRMMDV 146 (352)
T ss_pred CchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECC---CCcEEEEEeC
Confidence 123345789999999877665 3 7899999998 4566665553
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.8e-08 Score=91.43 Aligned_cols=172 Identities=16% Similarity=0.249 Sum_probs=113.2
Q ss_pred CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE--
Q psy4510 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-- 339 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~-- 339 (812)
..+.+.+..|+++..+-+.+-.+ ..++++..||.+.+++.+.-.. ...+.-..|.+. .+.+....+. ++.++.
T Consensus 79 i~~~~~~a~~sep~p~~~~s~~~-t~V~~~~~dg~~~v~s~~~~~~--~~~~i~~~~~~~-as~~~~~~~~-~i~s~~~g 153 (319)
T KOG4714|consen 79 IDPFKVLAKNSEIDPNDACTMTD-NRVCIGYADGSLAVFSTDKDLA--LMSRIPSIHSGS-ASRKICRHGN-SILSGGCG 153 (319)
T ss_pred cCceeeeeccCCCCCcccccccC-CceEecCCCceEEEEechHHHh--hhhhcccccccc-cccceeeccc-EEecCCcc
Confidence 35566666666555444444444 6899999999999999876221 111111112221 1222333333 233322
Q ss_pred ---CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 340 ---VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 340 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
.-+..++|+++...+ +..- ......|.+++-+|..+ ++++|+.||.+-+||.|+. ..++..++.|+.+|.
T Consensus 154 ~~n~~d~~~a~~~~p~~t---~~~~-~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~--~~p~S~l~ahk~~i~ 227 (319)
T KOG4714|consen 154 NWNAQDNFYANTLDPIKT---LIPS-KKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV--AMPVSLLKAHKAEIW 227 (319)
T ss_pred eEeeccceeeeccccccc---cccc-ccccccchhhhCCcccccEEEEecCCCeEEEEEcccc--cchHHHHHHhhhhhh
Confidence 123456677663221 1111 11123499999999765 8889999999999999983 567788899999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+-|+|.++..|++++.||.+..||.++.
T Consensus 228 eV~FHpk~p~~Lft~sedGslw~wdas~~ 256 (319)
T KOG4714|consen 228 EVHFHPKNPEHLFTCSEDGSLWHWDASTT 256 (319)
T ss_pred heeccCCCchheeEecCCCcEEEEcCCCc
Confidence 99999999999999999999999998753
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.9e-06 Score=102.31 Aligned_cols=147 Identities=12% Similarity=0.026 Sum_probs=88.1
Q ss_pred EEEEEEeccCCeEEEEeecCcceEEEEeccccccccC---CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCC
Q psy4510 590 INRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD---DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 666 (812)
Q Consensus 590 v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp 666 (812)
...++++|++++|+++. +.+++|++||+.++..... .+.. .......+...+.. ....-.....+++++
T Consensus 742 P~GIavspdG~~LYVAD-s~n~~Irv~D~~tg~~~~~~gg~~~~-~~~l~~fG~~dG~g------~~~~l~~P~Gvavd~ 813 (1057)
T PLN02919 742 PSGISLSPDLKELYIAD-SESSSIRALDLKTGGSRLLAGGDPTF-SDNLFKFGDHDGVG------SEVLLQHPLGVLCAK 813 (1057)
T ss_pred ccEEEEeCCCCEEEEEE-CCCCeEEEEECCCCcEEEEEeccccc-CcccccccCCCCch------hhhhccCCceeeEeC
Confidence 45689999998666543 6778999999886532100 0000 00000000000000 000112346889999
Q ss_pred CCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecC
Q psy4510 667 TEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 746 (812)
Q Consensus 667 ~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~d 746 (812)
++.++++-+.+++|++||..++.+.++.- .|. .|..|| . ...++-.....|+++++
T Consensus 814 -dG~LYVADs~N~rIrviD~~tg~v~tiaG---~G~---~G~~dG----------~-------~~~a~l~~P~GIavd~d 869 (1057)
T PLN02919 814 -DGQIYVADSYNHKIKKLDPATKRVTTLAG---TGK---AGFKDG----------K-------ALKAQLSEPAGLALGEN 869 (1057)
T ss_pred -CCcEEEEECCCCEEEEEECCCCeEEEEec---cCC---cCCCCC----------c-------ccccccCCceEEEEeCC
Confidence 77788888899999999988766654431 010 111111 1 12333346788999999
Q ss_pred CceeEEeeccCCceEEeeecCcc
Q psy4510 747 EKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 747 g~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
|+ ++++-+.+++|++||++...
T Consensus 870 G~-lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 870 GR-LFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CC-EEEEECCCCEEEEEECCCCc
Confidence 98 89999999999999998775
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=98.10 Aligned_cols=159 Identities=19% Similarity=0.250 Sum_probs=122.3
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc-
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK- 355 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~- 355 (812)
.++|+-.-.++-++.+.+..|-+-++.++- .+.|. ..+.|.+++|...++ ++..|..+|.|...|+|....+
T Consensus 216 ~CawSlni~gyhfs~G~sqqv~L~nvetg~-----~qsf~-sksDVfAlQf~~s~n-Lv~~GcRngeI~~iDLR~rnqG~ 288 (425)
T KOG2695|consen 216 SCAWSLNIMGYHFSVGLSQQVLLTNVETGH-----QQSFQ-SKSDVFALQFAGSDN-LVFNGCRNGEIFVIDLRCRNQGN 288 (425)
T ss_pred hhhhhhccceeeecccccceeEEEEeeccc-----ccccc-cchhHHHHHhcccCC-eeEecccCCcEEEEEeeecccCC
Confidence 346765433344566667889999998874 44454 677899999998887 8999999999999999976443
Q ss_pred -cceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE--ccCCCcEEEEEE
Q psy4510 356 -SCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW--HPTESSTFASGG 431 (812)
Q Consensus 356 -~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~l~s~~ 431 (812)
.+...+ -|.+.|+++..-. .+++|++.+.+|.|++||+|..+.+..+.++.+|...-.-+.+ .+.+ ..++++|
T Consensus 289 ~~~a~rl--yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~ee-g~I~s~G 365 (425)
T KOG2695|consen 289 GWCAQRL--YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEE-GSIFSVG 365 (425)
T ss_pred CcceEEE--EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeeccccccccccccccccc-ceEEEcc
Confidence 334443 6899999998877 6679999999999999999986666779999999665444443 4443 5788899
Q ss_pred CCCCEEEEEcCCCC
Q psy4510 432 ADDQIALWDLAVER 445 (812)
Q Consensus 432 ~dg~v~iwd~~~~~ 445 (812)
.|...+||.+..+.
T Consensus 366 dDcytRiWsl~~gh 379 (425)
T KOG2695|consen 366 DDCYTRIWSLDSGH 379 (425)
T ss_pred CeeEEEEEecccCc
Confidence 99999999999873
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.5e-08 Score=96.87 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=107.8
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee---CCCceEEeeCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD---DPFQLAEHNKKRG 255 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~---~d~~i~vwd~~~~ 255 (812)
+..+.++| .+++||++..+....++++....+....... .--...-+++.|..+......+. ....+.+|....
T Consensus 65 ~~~~~~s~-~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~-~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~- 141 (390)
T KOG3914|consen 65 PALVLTSD-SGRLVAVATSSKQRAVFDYRENPKGAKLLDV-SCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS- 141 (390)
T ss_pred ccccccCC-CceEEEEEeCCCceEEEEEecCCCcceeeeE-eecccCcceeeeeeccceEEEEeecCCceeeeeecccc-
Confidence 34456777 8888888877777777776654421001111 11112223344444444444443 445555665543
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
.+...+.||-+.++.++|+||+ .++++++.|..|+|-....... ...-..||+.-|..++.-++. .|
T Consensus 142 -------~~~~~~lGhvSml~dVavS~D~-~~IitaDRDEkIRvs~ypa~f~---IesfclGH~eFVS~isl~~~~--~L 208 (390)
T KOG3914|consen 142 -------GRCEPILGHVSMLLDVAVSPDD-QFIITADRDEKIRVSRYPATFV---IESFCLGHKEFVSTISLTDNY--LL 208 (390)
T ss_pred -------cCcchhhhhhhhhheeeecCCC-CEEEEecCCceEEEEecCcccc---hhhhccccHhheeeeeeccCc--ee
Confidence 2334466899999999999999 8999999999999987765441 234456899999999998876 48
Q ss_pred EEEECCCeEEEEECCCCC
Q psy4510 336 ASCSVDLSIRIWDTRVIN 353 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~ 353 (812)
+|+|.|++|++||++++.
T Consensus 209 lS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 209 LSGSGDKTLRLWDITSGK 226 (390)
T ss_pred eecCCCCcEEEEecccCC
Confidence 999999999999999544
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.3e-06 Score=91.34 Aligned_cols=195 Identities=10% Similarity=0.015 Sum_probs=116.5
Q ss_pred CeeeeeEcCCCCc-EEEeeC---CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC--CcEE
Q psy4510 225 SAEDLQWSDLKTA-LQTVDD---PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK--RNIH 298 (812)
Q Consensus 225 ~V~~l~~s~~~~~-l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--g~i~ 298 (812)
.+....|+|+|+. ++..+. ...|.++|+.++ + ...+....+......|+|+|..++++.+.+ ..|.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg-------~-~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 260 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTG-------K-KEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIY 260 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCC-------c-EEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEE
Confidence 7778999999985 554443 356888888775 2 222323445566788999996566666554 4577
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
++++..+. ...+..+........|+|+|+.++++....+ .|.+.|+..+... ..+. .+. . ...|+|
T Consensus 261 ~~dl~~g~-----~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~--rlt~-~g~--~--~~~~SP 328 (419)
T PRK04043 261 LYDTNTKT-----LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE--QVVF-HGK--N--NSSVST 328 (419)
T ss_pred EEECCCCc-----EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE--eCcc-CCC--c--CceECC
Confidence 77876654 2334434433445689999998766665555 4666677643321 1111 111 1 248999
Q ss_pred CCCEEEEEeCC---------CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCC--EEEEEcCCC
Q psy4510 377 TEPLIVSGGDD---------GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ--IALWDLAVE 444 (812)
Q Consensus 377 ~~~~l~sg~~d---------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~--v~iwd~~~~ 444 (812)
+|+.|+..+.. ..|.+.|+.. + ....+... .......|+|+|..++++....+. +.+.++...
T Consensus 329 DG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~---g-~~~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~ 402 (419)
T PRK04043 329 YKNYIVYSSRETNNEFGKNTFNLYLISTNS---D-YIRRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN 402 (419)
T ss_pred CCCEEEEEEcCCCcccCCCCcEEEEEECCC---C-CeEECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence 99966655543 2577778753 2 23334332 233458899998655555444444 445555443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.5e-08 Score=94.60 Aligned_cols=159 Identities=18% Similarity=0.228 Sum_probs=108.4
Q ss_pred cCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE---eCCCcEEEEeCCCCCcc
Q psy4510 232 SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG---DCKRNIHIWTPREAGAW 308 (812)
Q Consensus 232 s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg---~~dg~i~vwd~~~~~~~ 308 (812)
++.+++||.+..+....++++..... ..+++..... ...-+++.|..+. .....+ +....+.+|.+..+
T Consensus 71 s~~~~llAv~~~~K~~~~f~~~~~~~---~~kl~~~~~v-~~~~~ai~~~~~~-~sv~v~dkagD~~~~di~s~~~~--- 142 (390)
T KOG3914|consen 71 SDSGRLVAVATSSKQRAVFDYRENPK---GAKLLDVSCV-PKRPTAISFIRED-TSVLVADKAGDVYSFDILSADSG--- 142 (390)
T ss_pred CCCceEEEEEeCCCceEEEEEecCCC---cceeeeEeec-ccCcceeeeeecc-ceEEEEeecCCceeeeeeccccc---
Confidence 36777777777777766776665310 0122222221 2223445554444 233333 33455666666553
Q ss_pred eeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 309 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
......||-+.+++++|+||++ .++++..|..||+-... ....+..+.-+|..-|..++.-++. .|++||.|+
T Consensus 143 --~~~~~lGhvSml~dVavS~D~~-~IitaDRDEkIRvs~yp---a~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~ 215 (390)
T KOG3914|consen 143 --RCEPILGHVSMLLDVAVSPDDQ-FIITADRDEKIRVSRYP---ATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDK 215 (390)
T ss_pred --CcchhhhhhhhhheeeecCCCC-EEEEecCCceEEEEecC---cccchhhhccccHhheeeeeeccCc-eeeecCCCC
Confidence 4677889999999999999998 69999999999998776 3444666778999999999988654 689999999
Q ss_pred cEEEEecCCCCCCCceEEcc
Q psy4510 389 CIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~ 408 (812)
+|++||+++ ++.+.++.
T Consensus 216 tlr~Wd~~s---gk~L~t~d 232 (390)
T KOG3914|consen 216 TLRLWDITS---GKLLDTCD 232 (390)
T ss_pred cEEEEeccc---CCcccccc
Confidence 999999994 55555543
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.4e-08 Score=89.63 Aligned_cols=147 Identities=12% Similarity=0.193 Sum_probs=99.7
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-----CCCceEEeeCCCCCCCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-----DPFQLAEHNKKRGKGPGIPT 262 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~ 262 (812)
.++.+++++.||.+.+++.+.... ...+.-..|.+ -.+.+....+..+.++. .-+..++|+++.
T Consensus 100 ~~t~V~~~~~dg~~~v~s~~~~~~--~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p-------- 168 (319)
T KOG4714|consen 100 TDNRVCIGYADGSLAVFSTDKDLA--LMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDP-------- 168 (319)
T ss_pred cCCceEecCCCceEEEEechHHHh--hhhhccccccc-ccccceeecccEEecCCcceEeeccceeeecccc--------
Confidence 678899999999999998765211 01111111111 11222223444444332 223345555443
Q ss_pred CCceEEc---CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE
Q psy4510 263 PPLFSFS---GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339 (812)
Q Consensus 263 ~~~~~~~---~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 339 (812)
+.++. .-...|.+++-+|....++++|+.||.+.+||.+.... +...++.|+..|+.+-|+|..+.-|++|+
T Consensus 169 --~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~---p~S~l~ahk~~i~eV~FHpk~p~~Lft~s 243 (319)
T KOG4714|consen 169 --IKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAM---PVSLLKAHKAEIWEVHFHPKNPEHLFTCS 243 (319)
T ss_pred --cccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccc---hHHHHHHhhhhhhheeccCCCchheeEec
Confidence 22221 11234999999998878999999999999999998753 56678899999999999998877799999
Q ss_pred CCCeEEEEECC
Q psy4510 340 VDLSIRIWDTR 350 (812)
Q Consensus 340 ~dg~i~iwd~~ 350 (812)
.||.+--||..
T Consensus 244 edGslw~wdas 254 (319)
T KOG4714|consen 244 EDGSLWHWDAS 254 (319)
T ss_pred CCCcEEEEcCC
Confidence 99999999987
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.5e-08 Score=91.21 Aligned_cols=262 Identities=19% Similarity=0.237 Sum_probs=157.1
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCC------------cEEEEEecCCC-CCEE
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT------------EGFAMDWSSTE-PGVL 288 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~------------~v~~l~~sp~~-~~~l 288 (812)
....|+++.|...|.+|++|...|.+.++.-..... -..+-...|.+|.. .|..+.|..++ ...+
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~--ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYG--CEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccc--cchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 346799999999999999999999999997665310 01122233555543 47788887654 3457
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecC
Q psy4510 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~ 362 (812)
+..+.|.+|++|.+.......+....+.. ..+++++. ..- ++--++. |..|...- .+...
T Consensus 103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~----~~l-~lprls~hd~iiaa~p---------~rvya 168 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTST----KEL-LLPRLSEHDEIIAAKP---------CRVYA 168 (460)
T ss_pred EEecCCceeeeeeeecccchhhhccccccccccccCCCcCCH----HHh-hcccccccceEEEecc---------ceecc
Confidence 77778999999999876422221111111 01111111 000 0000111 11111111 11222
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-----CCCEEEEEEccCCCcEEEEEECCCCEE
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-----TAPVTTVEWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~s~~~dg~v~ 437 (812)
.+|.-.|++++|+.+...++++ .|=.|.+|++......-.+..++.| ..-|++..|+|..-.++.-++..|.|+
T Consensus 169 NaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred ccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 6788899999999998887776 4778999999754333344455555 346899999998777888888899999
Q ss_pred EEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 438 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
+-|++...............--+...-+...--..|.++.|++++. ++++-..-.+.+|+...
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr-yIlsRdyltvkiwDvnm 310 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR-YILSRDYLTVKIWDVNM 310 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc-EEEEeccceEEEEeccc
Confidence 9999854321111111111111112222333345789999999963 66666666677776544
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.5e-08 Score=100.85 Aligned_cols=251 Identities=12% Similarity=0.186 Sum_probs=159.9
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc---cccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW---QVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
-.+..+.||++.|.+++--. +.+-+++++.|++|++|.+...... ..++.+...|+.+|..+.|-.+-++++++
T Consensus 726 irL~nf~GH~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc-- 802 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC-- 802 (1034)
T ss_pred eeeecccCcHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--
Confidence 34556779999999888777 8899999999999999998864432 33777889999999999999999888765
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCC-CCCE-EEEEeCCCcEEEEeCCCCCcceeccc--cccC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSST-EPGV-LATGDCKRNIHIWTPREAGAWQVDQK--PLVG 317 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~-~~~~-l~sg~~dg~i~vwd~~~~~~~~~~~~--~~~~ 317 (812)
|+.|.+||.-.+ +++.... ...+.+..+..-++ ...+ ++.++...+|+++|.+..+ |....+ ...+
T Consensus 803 D~giHlWDPFig-------r~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce-~~~E~kVcna~~ 874 (1034)
T KOG4190|consen 803 DGGIHLWDPFIG-------RLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE-WTCELKVCNAPG 874 (1034)
T ss_pred cCcceeeccccc-------chhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccccc-ceeeEEeccCCC
Confidence 789999997664 4443221 11122222333232 2133 4444778999999998875 222222 2244
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEE-EecC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV-WDLR 396 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i-wd~~ 396 (812)
....+.+++..+.|+ .++.+-..|.|.+.|.|++.. +... ..-......++ .|..+.++....|.++.+ |-.-
T Consensus 875 Pna~~R~iaVa~~GN-~lAa~LSnGci~~LDaR~G~v---INsw-rpmecdllqla-apsdq~L~~saldHslaVnWhal 948 (1034)
T KOG4190|consen 875 PNALTRAIAVADKGN-KLAAALSNGCIAILDARNGKV---INSW-RPMECDLLQLA-APSDQALAQSALDHSLAVNWHAL 948 (1034)
T ss_pred CchheeEEEeccCcc-hhhHHhcCCcEEEEecCCCce---eccC-Ccccchhhhhc-CchhHHHHhhcccceeEeeehhc
Confidence 567799999999999 489999999999999996532 2222 22222233333 344556777777777777 7553
Q ss_pred CCCCCCceEEcccCCCCEEEEEEc-cCCCcEEEEEECCCCEEEEEc
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWH-PTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.+......+....+. .|. .-|+ -|+++...+.+.+|--
T Consensus 949 ---dgimh~q~kpppepa---hflqsvgp-SLV~a~~Gn~lgVYad 987 (1034)
T KOG4190|consen 949 ---DGIMHLQDKPPPEPA---HFLQSVGP-SLVTAQNGNILGVYAD 987 (1034)
T ss_pred ---CCeeeeccCCCCcch---hhhhccCc-eeEEeccCcEEEEEec
Confidence 222222222111111 111 1133 4666666667777753
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.6e-06 Score=83.23 Aligned_cols=224 Identities=13% Similarity=0.118 Sum_probs=143.7
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEc-CCCCcEEEeeCCCceEEeeCCCCCCCC
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPG 259 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s-~~~~~l~s~~~d~~i~vwd~~~~~~~~ 259 (812)
+.+|.+.++.++++--..+.|+.|+..++... ...+.+ ...+++. ++++ |+.+.. +.+.++|..++
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~---~~~~~~----~~G~~~~~~~g~-l~v~~~-~~~~~~d~~~g---- 70 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE---VIDLPG----PNGMAFDRPDGR-LYVADS-GGIAVVDPDTG---- 70 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE---EEESSS----EEEEEEECTTSE-EEEEET-TCEEEEETTTT----
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE---EEecCC----CceEEEEccCCE-EEEEEc-CceEEEecCCC----
Confidence 46787767888888888899999998876521 111222 6667777 6655 444444 44455588775
Q ss_pred CCCCCceEEc--C-CCCcEEEEEecCCCCCEEEEEeCC--------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 260 IPTPPLFSFS--G-HLTEGFAMDWSSTEPGVLATGDCK--------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 260 ~~~~~~~~~~--~-h~~~v~~l~~sp~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
..+.+.... . .....+.+++.|+| .+.++.... |.|..++.. +. ...+...-...+.|+|+
T Consensus 71 -~~~~~~~~~~~~~~~~~~ND~~vd~~G-~ly~t~~~~~~~~~~~~g~v~~~~~~-~~-----~~~~~~~~~~pNGi~~s 142 (246)
T PF08450_consen 71 -KVTVLADLPDGGVPFNRPNDVAVDPDG-NLYVTDSGGGGASGIDPGSVYRIDPD-GK-----VTVVADGLGFPNGIAFS 142 (246)
T ss_dssp -EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-----EEEEEEEESSEEEEEEE
T ss_pred -cEEEEeeccCCCcccCCCceEEEcCCC-CEEEEecCCCccccccccceEEECCC-Ce-----EEEEecCcccccceEEC
Confidence 233444442 1 33567899999998 566665543 456666666 32 12222234567899999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCc-c---cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINT-K---SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~-~---~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
|+++.++++-+..+.|..+++..... . .....+ ....+..-.+++..+|++.++....+.|.++|.. ++.+
T Consensus 143 ~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~----G~~~ 217 (246)
T PF08450_consen 143 PDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDF-PGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD----GKLL 217 (246)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE--SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT----SCEE
T ss_pred CcchheeecccccceeEEEeccccccceeeeeeEEEc-CCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC----ccEE
Confidence 99997777888899999999864322 1 112222 1222347889999999988888889999999984 6667
Q ss_pred EEcccCCCCEEEEEEc-cCCCcEEEEE
Q psy4510 405 ATFKHHTAPVTTVEWH-PTESSTFASG 430 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~-p~~~~~l~s~ 430 (812)
..+......+++++|. |+...+++|.
T Consensus 218 ~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 218 REIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred EEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 7666665689999995 5544455554
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.3e-05 Score=76.17 Aligned_cols=151 Identities=16% Similarity=0.187 Sum_probs=92.2
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCc-ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINT-KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
++.+++|+ +++.-.|..|-|-..+..-. ......++......-.-++|+|++.+||.+...|+|++||+. +..
T Consensus 3 ~~~~~~Gk--~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~----g~~ 76 (282)
T PF15492_consen 3 LALSSDGK--LLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM----GSE 76 (282)
T ss_pred eeecCCCc--EEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecc----cce
Confidence 56677887 44445667777766553211 101112333444556889999999999999999999999995 344
Q ss_pred eEEccc-------CCCCEEEEEEccCC-----CcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec--C
Q psy4510 404 VATFKH-------HTAPVTTVEWHPTE-----SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL--G 469 (812)
Q Consensus 404 ~~~~~~-------h~~~v~~v~~~p~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 469 (812)
+..+.. -...|.++.|.+.. ..-|++-...|.++-|-+..+... .......|... .
T Consensus 77 lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q----------~y~e~hsfsf~~~y 146 (282)
T PF15492_consen 77 LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQ----------GYQENHSFSFSSHY 146 (282)
T ss_pred eEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCC----------cceeeEEEEecccC
Confidence 444332 13467777775532 235667777888888887543210 11112222222 2
Q ss_pred CCceeEEEEcCCCCCEEEEEeC
Q psy4510 470 QKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 470 ~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
...|.++.++|....+++++..
T Consensus 147 p~Gi~~~vy~p~h~LLlVgG~~ 168 (282)
T PF15492_consen 147 PHGINSAVYHPKHRLLLVGGCE 168 (282)
T ss_pred CCceeEEEEcCCCCEEEEeccC
Confidence 3479999999998766666543
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=2e-05 Score=88.63 Aligned_cols=250 Identities=14% Similarity=0.237 Sum_probs=158.2
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC---
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK--- 253 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~--- 253 (812)
+.|.++.|.- +++.|+.+...|.|.+-|.++.. ......-...|.+++||||++.++..+..+++.+-...
T Consensus 69 ~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~-----~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~ 142 (1265)
T KOG1920|consen 69 DEIVSVQFLA-DTNSICVITALGDIILVDPETLE-----LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEP 142 (1265)
T ss_pred cceEEEEEec-ccceEEEEecCCcEEEEcccccc-----eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccc
Confidence 7899999998 99988888889999999877653 23344566899999999999999999888877664321
Q ss_pred -CCC-C----------CCC-CCCCceEEcCCCC---------------------cEEEEEecCCCCCEEEEE-----eCC
Q psy4510 254 -RGK-G----------PGI-PTPPLFSFSGHLT---------------------EGFAMDWSSTEPGVLATG-----DCK 294 (812)
Q Consensus 254 -~~~-~----------~~~-~~~~~~~~~~h~~---------------------~v~~l~~sp~~~~~l~sg-----~~d 294 (812)
... . +.. -.+.-..|+|..+ .=..+.|--+| .++|+. ...
T Consensus 143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg-~~fAVs~~~~~~~~ 221 (1265)
T KOG1920|consen 143 IAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDG-EYFAVSFVESETGT 221 (1265)
T ss_pred hhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCC-cEEEEEEEeccCCc
Confidence 000 0 000 0011112222111 12358999998 677763 223
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
+.|+|||-+ +. ....-....+--.+++|-|.|. ++++-. .|+.|.++.-+....+.-...+ ......|..
T Consensus 222 RkirV~drE-g~----Lns~se~~~~l~~~LsWkPsgs-~iA~iq~~~sd~~IvffErNGL~hg~f~l~~-p~de~~ve~ 294 (1265)
T KOG1920|consen 222 RKIRVYDRE-GA----LNSTSEPVEGLQHSLSWKPSGS-LIAAIQCKTSDSDIVFFERNGLRHGEFVLPF-PLDEKEVEE 294 (1265)
T ss_pred eeEEEeccc-ch----hhcccCcccccccceeecCCCC-eEeeeeecCCCCcEEEEecCCccccccccCC-cccccchhe
Confidence 799999977 32 1111122233446899999888 566653 4667999986643333222222 223344999
Q ss_pred EEEcCCCCEEEE---EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 372 ISWNRTEPLIVS---GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 372 l~~~~~~~~l~s---g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
++|+.++.+||+ ......|++|-+.+.. ...-..+....... +.|+|..+..|..-..+|...++|+.-
T Consensus 295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh-WYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~~~ 366 (1265)
T KOG1920|consen 295 LAWNSNSDILAVVTSNLENSLVQLWTTGNYH-WYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDFAW 366 (1265)
T ss_pred eeecCCCCceeeeecccccceEEEEEecCeE-EEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEEEE
Confidence 999999998887 4455569999987532 11112222222222 889998777777766788888877653
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.7e-08 Score=106.31 Aligned_cols=222 Identities=17% Similarity=0.201 Sum_probs=154.9
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC--
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-- 243 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-- 243 (812)
++.+..+..|...-+|++||- +.+.|+.|+..|.|++|++.++. .......|..+|+-+.-+.+|..+++.+.
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~----~e~s~ncH~SavT~vePs~dgs~~Ltsss~S 1165 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGS----MEESVNCHQSAVTLVEPSVDGSTQLTSSSSS 1165 (1516)
T ss_pred cccchhhhccccceeeEEeec-CCceEEeeeccceEEEEEccCcc----ccccccccccccccccccCCcceeeeecccc
Confidence 567778878889999999999 99999999999999999999987 56778899999999999999988776653
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.-...+|++.. ...+.++|.+ -.++.|+... ..-+.|.......+||++++...........+..-.-+
T Consensus 1166 ~PlsaLW~~~s------~~~~~Hsf~e----d~~vkFsn~~-q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n 1234 (1516)
T KOG1832|consen 1166 SPLSALWDASS------TGGPRHSFDE----DKAVKFSNSL-QFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNN 1234 (1516)
T ss_pred CchHHHhcccc------ccCccccccc----cceeehhhhH-HHHHhcccccceEEEecccCcHHHHhcCcchhhhhhcc
Confidence 33578899877 3567777764 4488898765 44455555577999999998742111111122222347
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+..|+|... +++ .|| .+||+|.. ..+..+ .... .--.-.|+|.|.-++.-+ -|||+|+++ .
T Consensus 1235 ~a~FsP~D~-LIl---ndG--vLWDvR~~---~aIh~F-D~ft-~~~~G~FHP~g~eVIINS-----EIwD~RTF~---l 1295 (1516)
T KOG1832|consen 1235 LAHFSPCDT-LIL---NDG--VLWDVRIP---EAIHRF-DQFT-DYGGGGFHPSGNEVIINS-----EIWDMRTFK---L 1295 (1516)
T ss_pred ccccCCCcc-eEe---eCc--eeeeeccH---HHHhhh-hhhe-ecccccccCCCceEEeec-----hhhhhHHHH---H
Confidence 888999998 443 244 58999953 344444 2122 222346899998776654 599999643 3
Q ss_pred eEEcccCCCCEEEEEEccCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~ 424 (812)
++....- .-..|.|+..|.
T Consensus 1296 Lh~VP~L--dqc~VtFNstG~ 1314 (1516)
T KOG1832|consen 1296 LHSVPSL--DQCAVTFNSTGD 1314 (1516)
T ss_pred HhcCccc--cceEEEeccCcc
Confidence 4443322 125677877763
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.2e-06 Score=80.08 Aligned_cols=197 Identities=13% Similarity=0.136 Sum_probs=113.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccc--ccCCCCCCeeeeeEcCCC------CcEEEeeCCCceEEe
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK--PLGGHTNSAEDLQWSDLK------TALQTVDDPFQLAEH 250 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~--~l~~h~~~V~~l~~s~~~------~~l~s~~~d~~i~vw 250 (812)
=.-++||| ++.+||.+...|+|++||+........... ....-..+|..|.|.+.. ..|+.....|.++-|
T Consensus 46 WRkl~WSp-D~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy 124 (282)
T PF15492_consen 46 WRKLAWSP-DCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSY 124 (282)
T ss_pred heEEEECC-CCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeE
Confidence 45689999 999999999999999999886442111111 111234577788886543 256677788888888
Q ss_pred eCCCCCCCCCCCCCceE--EcC-CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 251 NKKRGKGPGIPTPPLFS--FSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~--~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
-+..+... ..+..++ +.. +...|.++.|+|.. ++|+.|+.... +.+. -++....+++-..
T Consensus 125 ~vs~gt~q--~y~e~hsfsf~~~yp~Gi~~~vy~p~h-~LLlVgG~~~~------~~~~--------s~a~~~GLtaWRi 187 (282)
T PF15492_consen 125 LVSVGTNQ--GYQENHSFSFSSHYPHGINSAVYHPKH-RLLLVGGCEQN------QDGM--------SKASSCGLTAWRI 187 (282)
T ss_pred EEEcccCC--cceeeEEEEecccCCCceeEEEEcCCC-CEEEEeccCCC------CCcc--------ccccccCceEEEE
Confidence 76443111 1233333 333 46789999999998 67777765322 0000 0011112222222
Q ss_pred cCCCCeEE-EEEECCCe------EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 328 SPGEKRVL-ASCSVDLS------IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 328 ~p~~~~~l-~s~~~dg~------i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
-.+.+++. ++...|+. -.+|.+-+ . .+..........|..|+.+|+|++||+...+|.|.+|++..
T Consensus 188 L~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~---~-~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPs 260 (282)
T PF15492_consen 188 LSDSPYYKQVTSSEDDITASSKRRGLLRIPS---F-KFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPS 260 (282)
T ss_pred cCCCCcEEEccccCccccccccccceeeccc---e-eeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCc
Confidence 22222111 11111111 12222210 0 01111133467799999999999999999999999999975
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-05 Score=85.90 Aligned_cols=187 Identities=10% Similarity=0.017 Sum_probs=109.8
Q ss_pred cEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEE
Q psy4510 274 EGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWD 348 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd 348 (812)
......|+|++..+++..+. ...|+++|+.++.. ..+....+......|+|+|+.++++.+.++ .|.++|
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~-----~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d 263 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK-----EKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYD 263 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE-----EEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEE
Confidence 77899999999544554333 35688899987752 233334555667889999998777766554 577778
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCC--cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDG--CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 425 (812)
+..+. ...+ ..+........|+|+|+.|+-.+ ..| .|.+.|+.. +.. ..+..... ....|+|+|..
T Consensus 264 l~~g~----~~~L-T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~---g~~-~rlt~~g~--~~~~~SPDG~~ 332 (419)
T PRK04043 264 TNTKT----LTQI-TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS---GSV-EQVVFHGK--NNSSVSTYKNY 332 (419)
T ss_pred CCCCc----EEEc-ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCC---CCe-EeCccCCC--cCceECCCCCE
Confidence 76432 2222 22222234568999998555444 334 566777753 222 22221111 12489999865
Q ss_pred EEEEEECC--------CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 426 TFASGGAD--------DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 426 ~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
++++.... ..|.+.|+..... ..+. .+ .......|+|++..++++...++.
T Consensus 333 Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~---------------~~LT--~~-~~~~~p~~SPDG~~I~f~~~~~~~ 391 (419)
T PRK04043 333 IVYSSRETNNEFGKNTFNLYLISTNSDYI---------------RRLT--AN-GVNQFPRFSSDGGSIMFIKYLGNQ 391 (419)
T ss_pred EEEEEcCCCcccCCCCcEEEEEECCCCCe---------------EECC--CC-CCcCCeEECCCCCEEEEEEccCCc
Confidence 55554433 2577777766531 1111 11 122357899999877777655443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.4e-08 Score=63.79 Aligned_cols=37 Identities=32% Similarity=0.544 Sum_probs=35.0
Q ss_pred ccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 727 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 727 ~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
++.++.+|.+.|++|+|+|++. +|+|+|.|++|+|||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~-~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGN-FLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSS-EEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccc-cceeeCCCCEEEEEC
Confidence 5678999999999999999999 899999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00011 Score=73.14 Aligned_cols=225 Identities=14% Similarity=0.061 Sum_probs=135.9
Q ss_pred eeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 228 DLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 228 ~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
+++|.+ ++.++.+--..+.|..|+..++ ....+.... ..++++...+ +.|+.+.. +.+.++|+.++.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~--------~~~~~~~~~--~~G~~~~~~~-g~l~v~~~-~~~~~~d~~~g~ 71 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTG--------EVEVIDLPG--PNGMAFDRPD-GRLYVADS-GGIAVVDPDTGK 71 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTT--------EEEEEESSS--EEEEEEECTT-SEEEEEET-TCEEEEETTTTE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCC--------eEEEEecCC--CceEEEEccC-CEEEEEEc-CceEEEecCCCc
Confidence 466777 5555555557888999998774 222222222 6778887333 46666665 455666988764
Q ss_pred cceeccccc-cC-CCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 307 AWQVDQKPL-VG-HTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 307 ~~~~~~~~~-~~-h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
... ..... .. .....+++++.|+|. +.++.... |.|..++.. +. +... ...-...+.|+|+|
T Consensus 72 ~~~-~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~----~~~~-~~~~~~pNGi~~s~ 143 (246)
T PF08450_consen 72 VTV-LADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK----VTVV-ADGLGFPNGIAFSP 143 (246)
T ss_dssp EEE-EEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE----EEEE-EEEESSEEEEEEET
T ss_pred EEE-EeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce----EEEE-ecCcccccceEECC
Confidence 211 11111 22 345789999999998 66666543 557777765 21 1111 12245579999999
Q ss_pred CCCEE-EEEeCCCcEEEEecCCCCC----CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 377 TEPLI-VSGGDDGCIHVWDLRRFKK----GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 377 ~~~~l-~sg~~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+++.| ++-+..+.|..+++..... .+.+..+....+..-.+++..+| ++.++....+.|.+++....
T Consensus 144 dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G-~l~va~~~~~~I~~~~p~G~------- 215 (246)
T PF08450_consen 144 DGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDG-NLWVADWGGGRIVVFDPDGK------- 215 (246)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEETTTEEEEEETTSC-------
T ss_pred cchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCC-CEEEEEcCCCEEEEECCCcc-------
Confidence 99855 4667788899999864111 11222233333347889999987 57777667889999998733
Q ss_pred hhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEe
Q psy4510 452 REAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTA 490 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~ 490 (812)
.+.........+++++|- ++...++++++
T Consensus 216 ----------~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 216 ----------LLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp ----------EEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred ----------EEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 233334443578899994 55555666654
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.4e-05 Score=78.88 Aligned_cols=134 Identities=16% Similarity=0.288 Sum_probs=93.9
Q ss_pred EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
+++.+..+-+ ....+.+|...|.+++|+|....++..++.+..|+|.|+++ ..++..+ ..+ ..+.+++|..
T Consensus 175 v~~l~~~~fk----ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet---~~~vssy-~a~-~~~wSC~wDl 245 (463)
T KOG1645|consen 175 VQKLESHDFK----SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET---SCVVSSY-IAY-NQIWSCCWDL 245 (463)
T ss_pred eEEeccCCcc----hhhcccccchhhhhhccCccccceeeeeccCceEEEEeccc---ceeeehe-ecc-CCceeeeecc
Confidence 6666655544 24466778899999999999887899999999999999984 3344444 455 7899999998
Q ss_pred CCC-EEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEcc------CCCcEEEEEECCCCEEEEEcCCC
Q psy4510 377 TEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHP------TESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 377 ~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p------~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.. +|++|-..|.|.|||+|+ +..++..+.+ ...+|..++.-+ .+ .+|+..+.+ +..|++...
T Consensus 246 de~h~IYaGl~nG~VlvyD~R~--~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~g-glLv~~lt~--l~f~ei~~s 317 (463)
T KOG1645|consen 246 DERHVIYAGLQNGMVLVYDMRQ--PEGPLMELVANVTINPVHKIAPVQPNKIFTSG-GLLVFALTV--LQFYEIVFS 317 (463)
T ss_pred CCcceeEEeccCceEEEEEccC--CCchHhhhhhhhccCcceeecccCcccccccc-ceEEeeehh--hhhhhhhcc
Confidence 875 899999999999999997 3344444433 234555554332 23 244444432 667776654
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.2e-05 Score=84.27 Aligned_cols=109 Identities=16% Similarity=0.185 Sum_probs=81.2
Q ss_pred EEEeCCCCCCeEEEec----CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 181 AMDWSSTEPGVLATGD----CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~----~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
-..|+| ...++|+++ ..|.|.||- ++++.. .-.+. .-.+++++|+|..-.|+.|-.-|.+.+|...+.
T Consensus 20 i~SWHP-sePlfAVA~fS~er~GSVtIfa-dtGEPq--r~Vt~---P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~- 91 (1416)
T KOG3617|consen 20 ISSWHP-SEPLFAVASFSPERGGSVTIFA-DTGEPQ--RDVTY---PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTT- 91 (1416)
T ss_pred ccccCC-CCceeEEEEecCCCCceEEEEe-cCCCCC--ccccc---ceehhhhccChHHHHHhhccccceeEEEecCCc-
Confidence 356888 777777763 468899993 333311 11111 123456999999999999999999999998773
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
+.......|..+|..+.||++| +.|+++..-|.|.+|....
T Consensus 92 ------e~htv~~th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 92 ------ETHTVVETHPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred ------eeeeeccCCCCCceeEEecCCC-CeEEEcCCCceeEEEEeee
Confidence 3333345699999999999999 8999999999999998763
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=8e-08 Score=99.64 Aligned_cols=207 Identities=15% Similarity=0.204 Sum_probs=140.2
Q ss_pred CCeeeeeEcCCC--CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe----CCCcE
Q psy4510 224 NSAEDLQWSDLK--TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD----CKRNI 297 (812)
Q Consensus 224 ~~V~~l~~s~~~--~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~----~dg~i 297 (812)
..+.|+++.-+. ..++.|..+|.|.+-.+.... ........+|....++++|++-....||.|- .|..+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~h-----dSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~ 131 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPH-----DSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSL 131 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcc-----cccceecccccccccccccccccHHHHHhhhhhhcccCCc
Confidence 345666654433 467888889999998887642 2223455678889999999998767788873 36689
Q ss_pred EEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 298 HIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
.|||+.+.-........+.+ -......++|-.+.+ ++.+|...+.+.++|+|..... .. ......+..+...|
T Consensus 132 ~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~k-lvlaGm~sr~~~ifdlRqs~~~--~~---svnTk~vqG~tVdp 205 (783)
T KOG1008|consen 132 KIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTK-LVLAGMTSRSVHIFDLRQSLDS--VS---SVNTKYVQGITVDP 205 (783)
T ss_pred cceecccccCCCccccccccccccCccccccccCcc-hhhcccccchhhhhhhhhhhhh--hh---hhhhhhcccceecC
Confidence 99999877321111122222 334567899997777 7889999899999999832111 11 12233566677788
Q ss_pred -CCCEEEEEeCCCcEEEEe-cCCCCCCCceEEcccCCC----CEEEEEEccCCCcEEEEEECC-CCEEEEEcCCC
Q psy4510 377 -TEPLIVSGGDDGCIHVWD-LRRFKKGSSVATFKHHTA----PVTTVEWHPTESSTFASGGAD-DQIALWDLAVE 444 (812)
Q Consensus 377 -~~~~l~sg~~dg~i~iwd-~~~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~~l~s~~~d-g~v~iwd~~~~ 444 (812)
..+++++-. ||.|.+|| .++ -..++..+..... .+..++|+|....++++...| ++|+++|+...
T Consensus 206 ~~~nY~cs~~-dg~iAiwD~~rn--ienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v 277 (783)
T KOG1008|consen 206 FSPNYFCSNS-DGDIAIWDTYRN--IENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVV 277 (783)
T ss_pred CCCCceeccc-cCceeeccchhh--hccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccccc
Confidence 455776655 99999999 654 2344444433333 489999999877788887765 68999998765
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.1e-07 Score=87.37 Aligned_cols=156 Identities=21% Similarity=0.260 Sum_probs=111.5
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
++.+.+..+-+-++.++. ...|. -++.|.++.|...+ .++..|...|.|...|++....-..-.....-|
T Consensus 228 fs~G~sqqv~L~nvetg~--------~qsf~-sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh 297 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGH--------QQSFQ-SKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYH 297 (425)
T ss_pred ecccccceeEEEEeeccc--------ccccc-cchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCCCcceEEEEc
Confidence 556677778888888851 22232 46789999999877 799999999999999998763211112223348
Q ss_pred CCCEEEEEEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEec
Q psy4510 319 TNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 319 ~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.+.|++++.-. +++ .|++.+.+|+|++||+|..+.+..+.+. .+|...-.-+-+ .+....++++|+|...+||.+
T Consensus 298 ~Ssvtslq~Lq~s~q-~LmaS~M~gkikLyD~R~~K~~~~V~qY-eGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl 375 (425)
T KOG2695|consen 298 DSSVTSLQILQFSQQ-KLMASDMTGKIKLYDLRATKCKKSVMQY-EGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSL 375 (425)
T ss_pred Ccchhhhhhhccccc-eEeeccCcCceeEeeehhhhcccceeee-ecccccccccccccccccceEEEccCeeEEEEEec
Confidence 99999999877 455 6888899999999999965555557666 566443322222 233448888999999999999
Q ss_pred CCCCCCCceEEccc
Q psy4510 396 RRFKKGSSVATFKH 409 (812)
Q Consensus 396 ~~~~~~~~~~~~~~ 409 (812)
+ .+..+.+++.
T Consensus 376 ~---~ghLl~tipf 386 (425)
T KOG2695|consen 376 D---SGHLLCTIPF 386 (425)
T ss_pred c---cCceeeccCC
Confidence 8 4666666553
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.4e-05 Score=78.88 Aligned_cols=258 Identities=12% Similarity=0.119 Sum_probs=150.9
Q ss_pred EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEE
Q psy4510 201 IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 279 (812)
Q Consensus 201 v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 279 (812)
|+..+..+.+ ....+.+|...|+.++|||... +|..++.+..|+|.|+.+. ..+.++..| ..+++++
T Consensus 175 v~~l~~~~fk----ssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~-------~~vssy~a~-~~~wSC~ 242 (463)
T KOG1645|consen 175 VQKLESHDFK----SSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS-------CVVSSYIAY-NQIWSCC 242 (463)
T ss_pred eEEeccCCcc----hhhcccccchhhhhhccCccccceeeeeccCceEEEEecccc-------eeeeheecc-CCceeee
Confidence 4444444433 2346778889999999999988 7788899999999999984 556666666 8899999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC--CCCCEEEEEE------cCCCCeEEEEEECCCeEEEEECCC
Q psy4510 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG--HTNSVEDLQW------SPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~--h~~~v~~~~~------~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
|.-+....+..|...|.|.|||++..... ...+.+ ...+|..++. .+.+. +|+..+. .+..|.+..
T Consensus 243 wDlde~h~IYaGl~nG~VlvyD~R~~~~~---~~e~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt--~l~f~ei~~ 316 (463)
T KOG1645|consen 243 WDLDERHVIYAGLQNGMVLVYDMRQPEGP---LMELVANVTINPVHKIAPVQPNKIFTSGG-LLVFALT--VLQFYEIVF 316 (463)
T ss_pred eccCCcceeEEeccCceEEEEEccCCCch---HhhhhhhhccCcceeecccCccccccccc-eEEeeeh--hhhhhhhhc
Confidence 99998889999999999999999987642 222222 1234444433 23333 3444433 356777653
Q ss_pred CCc-ccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCC----------------cEEEEecCCCCCCCceEEcccCCCC
Q psy4510 352 INT-KSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDG----------------CIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 352 ~~~-~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg----------------~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
... ..++.. ....+.+.++++.+..+ +|++--.+. --.||-.|..-.+.+. -+-++.+
T Consensus 317 s~~~~p~vle--le~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~--~kl~t~~ 392 (463)
T KOG1645|consen 317 SAECLPCVLE--LEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQ--TKLSTTQ 392 (463)
T ss_pred cccCCCcccc--cCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcc--ccccccc
Confidence 222 122222 23355566666666555 444432210 0122322210000000 0011111
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC-CCCCEEEEEeCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP-QLPGTIISTANS 492 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~~~~~~~~ 492 (812)
.+.-.+++..++..++..+.+.+||..+. .+.....-..+|.++.... ++..+++.-.++
T Consensus 393 --ai~~~~~nn~iv~~gd~tn~lil~D~~s~-----------------evvQ~l~~~epv~Dicp~~~n~~syLa~LTd~ 453 (463)
T KOG1645|consen 393 --AIRAVEDNNYIVVVGDSTNELILQDPHSF-----------------EVVQTLALSEPVLDICPNDTNGSSYLALLTDD 453 (463)
T ss_pred --ceeccccccEEEEecCCcceeEEeccchh-----------------heeeecccCcceeecceeecCCcchhhheecc
Confidence 12223344334556666789999999987 3333333345666665443 455677777778
Q ss_pred CeEEEEe
Q psy4510 493 GFNIFRT 499 (812)
Q Consensus 493 ~~~~~~~ 499 (812)
.+.+|+.
T Consensus 454 ~v~Iyk~ 460 (463)
T KOG1645|consen 454 RVHIYKN 460 (463)
T ss_pred eEEEEec
Confidence 8888764
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.6e-05 Score=83.79 Aligned_cols=107 Identities=16% Similarity=0.249 Sum_probs=80.4
Q ss_pred eeEcCCCCcEEEee----CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 229 LQWSDLKTALQTVD----DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 229 l~~s~~~~~l~s~~----~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
..|+|...+++.++ ..|.+.||--. | ....-.+..-| +.+++|+|.. -.|+.|-.-|.+.+|...+
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfadt-G-----EPqr~Vt~P~h---atSLCWHpe~-~vLa~gwe~g~~~v~~~~~ 90 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFADT-G-----EPQRDVTYPVH---ATSLCWHPEE-FVLAQGWEMGVSDVQKTNT 90 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEecC-C-----CCCccccccee---hhhhccChHH-HHHhhccccceeEEEecCC
Confidence 46778888888776 56788888533 3 11111222222 4579999987 7899999999999999887
Q ss_pred CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
.. .......|..+|..+.|+++|. .++++..-|.|.+|...
T Consensus 91 ~e----~htv~~th~a~i~~l~wS~~G~-~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 91 TE----THTVVETHPAPIQGLDWSHDGT-VLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ce----eeeeccCCCCCceeEEecCCCC-eEEEcCCCceeEEEEee
Confidence 76 3334456999999999999999 69999999999999765
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-05 Score=86.69 Aligned_cols=202 Identities=11% Similarity=0.131 Sum_probs=130.2
Q ss_pred CCCCCCCCCccCcC---CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC
Q psy4510 160 KGPGIPTPPLFSFS---GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT 236 (812)
Q Consensus 160 ~~~~~~~~~i~~~~---gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~ 236 (812)
.+|+++...+.... --.+.+.|+++ .+..||-|+.+|.|++++.+..- .+...|... ...|.
T Consensus 20 eePklkY~Ri~n~~~~~~~~D~is~~av---~~~~~~~GtH~g~v~~~~~~~~~------~~~~~~s~~------~~~Ge 84 (846)
T KOG2066|consen 20 EEPKLKYERISNLVKNFLQNDAISCCAV---HDKFFALGTHRGAVYLTTCQGNP------KTNFDHSSS------ILEGE 84 (846)
T ss_pred cCccceehhhhcccHHHHhhhHHHHHHh---hcceeeeccccceEEEEecCCcc------ccccccccc------ccCCc
Confidence 34666544433220 12367888886 45899999999999999876531 222333332 46799
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC----CCCEEEEEeCCCcEEEEeCCCCCcceecc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST----EPGVLATGDCKRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 312 (812)
++++|+.||.+.|-.+-+. ....++. -..++.+++++|+ ..+.+++|+..| +.++.-.=-+.+ ..
T Consensus 85 y~asCS~DGkv~I~sl~~~-------~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk--~~ 153 (846)
T KOG2066|consen 85 YVASCSDDGKVVIGSLFTD-------DEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNK--DS 153 (846)
T ss_pred eEEEecCCCcEEEeeccCC-------ccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCc--cc
Confidence 9999999999999988875 3333332 2467899999997 236799999988 777653322211 12
Q ss_pred ccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC-----CeEEEEEcCCCCEEEEEeCC
Q psy4510 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-----DVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~sg~~d 387 (812)
..+..-.++|.++.|.- . ++|=++.+| |++||+.+. ..+..++..+.. --..+.|.+.. .|+.|-.|
T Consensus 154 v~l~~~eG~I~~i~W~g--~-lIAWand~G-v~vyd~~~~---~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d 225 (846)
T KOG2066|consen 154 VVLSEGEGPIHSIKWRG--N-LIAWANDDG-VKVYDTPTR---QRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD 225 (846)
T ss_pred eeeecCccceEEEEecC--c-EEEEecCCC-cEEEecccc---ceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCC
Confidence 23455678999999974 3 677666555 899999743 333334333311 12346776554 56666544
Q ss_pred CcEEEEecC
Q psy4510 388 GCIHVWDLR 396 (812)
Q Consensus 388 g~i~iwd~~ 396 (812)
+|+|..++
T Consensus 226 -~v~i~~I~ 233 (846)
T KOG2066|consen 226 -SVKICSIK 233 (846)
T ss_pred -eEEEEEEe
Confidence 68999887
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.6e-05 Score=85.20 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=87.6
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCC-eeeeeEcC-----CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEc-
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNS-AEDLQWSD-----LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS- 269 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~s~-----~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~- 269 (812)
....|+--|++.++ .+.....|... |..++=.. .......|-.+..+..||.+-.. ..+..-.
T Consensus 502 ~~~~ly~mDLe~GK----VV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~------~k~v~~~~ 571 (794)
T PF08553_consen 502 NPNKLYKMDLERGK----VVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSG------NKLVDSQS 571 (794)
T ss_pred CCCceEEEecCCCc----EEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCC------Cceeeccc
Confidence 34567777777776 44444444432 44444211 12345667778889999987631 1111111
Q ss_pred ---CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 270 ---GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 270 ---~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.......|++-+.+ +.||+|+.+|.|++||--... ....+.+-..+|..|..+.+|+.+|||| +..|.+
T Consensus 572 k~Y~~~~~Fs~~aTt~~--G~iavgs~~G~IRLyd~~g~~----AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlL 643 (794)
T PF08553_consen 572 KQYSSKNNFSCFATTED--GYIAVGSNKGDIRLYDRLGKR----AKTALPGLGDPIIGIDVTADGKWILATC--KTYLLL 643 (794)
T ss_pred cccccCCCceEEEecCC--ceEEEEeCCCcEEeecccchh----hhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEE
Confidence 12345667766665 699999999999999943222 3445667789999999999999877776 467888
Q ss_pred EECC
Q psy4510 347 WDTR 350 (812)
Q Consensus 347 wd~~ 350 (812)
+++.
T Consensus 644 i~t~ 647 (794)
T PF08553_consen 644 IDTL 647 (794)
T ss_pred EEEe
Confidence 7753
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=4e-06 Score=90.81 Aligned_cols=187 Identities=13% Similarity=0.164 Sum_probs=137.8
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
++..+..||-...+..+|+.+.+ ..+...-....|.-|+ .+++.|.+|...|+|.+-|..+ .+.+++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~----e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s-------~~~iht 212 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEK----ETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNS-------FETIHT 212 (1118)
T ss_pred CCcceeecchhhheeeeecccce----eeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCc-------Cceeee
Confidence 55677777777788888888765 2222322233344444 5688999999999999999987 499999
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+..|++.|..+... | ++|++++. |.-|+|||++..+ .+.++.-+.++ .-+.|+|.-...++.+
T Consensus 213 ~~aHs~siSDfDv~--G-NlLitCG~S~R~~~l~~D~FvkVYDLRmmr----al~PI~~~~~P-~flrf~Psl~t~~~V~ 284 (1118)
T KOG1275|consen 213 FDAHSGSISDFDVQ--G-NLLITCGYSMRRYNLAMDPFVKVYDLRMMR----ALSPIQFPYGP-QFLRFHPSLTTRLAVT 284 (1118)
T ss_pred eeccccceeeeecc--C-CeEEEeecccccccccccchhhhhhhhhhh----ccCCcccccCc-hhhhhcccccceEEEE
Confidence 99999999877664 4 67777765 5568999999876 34444444443 5678899877789999
Q ss_pred ECCCeEEEEECCCCCcc-cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 339 SVDLSIRIWDTRVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+..|...+-|..+.... ..+..+ ......+..++++++++.++.|..+|.|.+|--+
T Consensus 285 S~sGq~q~vd~~~lsNP~~~~~~v-~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 285 SQSGQFQFVDTATLSNPPAGVKMV-NPNGSGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred ecccceeeccccccCCCccceeEE-ccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence 99999999995432222 222222 3445569999999999999999999999999854
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.4e-05 Score=82.70 Aligned_cols=220 Identities=11% Similarity=0.058 Sum_probs=141.5
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC-eeeeeEcCCCCcEEEeeCCC-----ceEEee
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS-AEDLQWSDLKTALQTVDDPF-----QLAEHN 251 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~s~~~~~l~s~~~d~-----~i~vwd 251 (812)
.|.| |++ .+..+|.|+.+|.|.+.+-.-. ....++++... |..+-......+|++.+.|+ .++||+
T Consensus 27 ~isc--~~s-~~~~vvigt~~G~V~~Ln~s~~-----~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~ 98 (933)
T KOG2114|consen 27 AISC--CSS-STGSVVIGTADGRVVILNSSFQ-----LIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWD 98 (933)
T ss_pred ceeE--EcC-CCceEEEeeccccEEEecccce-----eeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEec
Confidence 4554 567 8999999999999998864321 33556677777 44455445557888877554 499999
Q ss_pred CCCCCCCCCCCCCc--eEEcC-----CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 252 KKRGKGPGIPTPPL--FSFSG-----HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 252 ~~~~~~~~~~~~~~--~~~~~-----h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+........ ..++ +.+.+ ...++.+++.+.+- ..+|+|-.+|.|..+.-+-................+|+.
T Consensus 99 lek~~~n~s-P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l-~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITg 176 (933)
T KOG2114|consen 99 LEKVDKNNS-PQCLYEHRIFTIKNPTNPSPASSLAVSEDL-KTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITG 176 (933)
T ss_pred ccccCCCCC-cceeeeeeeeccCCCCCCCcceEEEEEccc-cEEEEEecCcEEEEEcCcchhccccceeeeccCCCCcee
Confidence 987532211 2222 12222 24578899999886 789999999999998532211100012222234569999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
+.+..+++.+++++. -..|.+|.+.. .+ +.......|+..++|-++++....+++++.. .+.+|+... ..+-
T Consensus 177 L~~~~d~~s~lFv~T-t~~V~~y~l~g-r~--p~~~~ld~~G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~---~~~c 248 (933)
T KOG2114|consen 177 LALRSDGKSVLFVAT-TEQVMLYSLSG-RT--PSLKVLDNNGISLNCSSFSDGTYQFICAGSE-FLYFYDSDG---RGPC 248 (933)
T ss_pred eEEecCCceeEEEEe-cceeEEEEecC-CC--cceeeeccCCccceeeecCCCCccEEEecCc-eEEEEcCCC---ccee
Confidence 999999986333333 36799999873 22 2333337889999999999877656555544 699999873 3344
Q ss_pred EEcc-cCCCCEE
Q psy4510 405 ATFK-HHTAPVT 415 (812)
Q Consensus 405 ~~~~-~h~~~v~ 415 (812)
..|. +|+....
T Consensus 249 faf~~g~kk~~~ 260 (933)
T KOG2114|consen 249 FAFEVGEKKEML 260 (933)
T ss_pred eeecCCCeEEEE
Confidence 4555 6655443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.9e-07 Score=60.76 Aligned_cols=37 Identities=27% Similarity=0.605 Sum_probs=34.7
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
++.++.+|.+.|++|+|+| ++.+|++++.|++|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSP-DGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence 6788999999999999999 788999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.9e-07 Score=98.71 Aligned_cols=201 Identities=15% Similarity=0.196 Sum_probs=140.5
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
.+.+..|+..-+|++|+-+.++|+.|+..|.|+++++.+| ........|...|+-+.=+.+|..+|.+++...
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG-------~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSG-------SMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSS 1166 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCc-------cccccccccccccccccccCCcceeeeeccccC
Confidence 3567788899999999999999999999999999999997 566678899999999999999955555555544
Q ss_pred -cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 296 -NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 296 -~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
...+|++.+... ....+. .-.++.|+..-.. -+.|..-....+||+.+........+-..+....-++..|
T Consensus 1167 PlsaLW~~~s~~~---~~Hsf~----ed~~vkFsn~~q~-r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~F 1238 (1516)
T KOG1832|consen 1167 PLSALWDASSTGG---PRHSFD----EDKAVKFSNSLQF-RALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHF 1238 (1516)
T ss_pred chHHHhccccccC---cccccc----ccceeehhhhHHH-HHhcccccceEEEecccCcHHHHhcCcchhhhhhcccccc
Confidence 678999876432 233333 3457788876542 3444444678999999654322211111222333488899
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
+|...+++ .|| .+||.|. .+.++.|...+..+ .-.|+|+|. -++.-+ .|||+++.+.
T Consensus 1239 sP~D~LIl---ndG--vLWDvR~---~~aIh~FD~ft~~~-~G~FHP~g~-eVIINS-----EIwD~RTF~l 1295 (1516)
T KOG1832|consen 1239 SPCDTLIL---NDG--VLWDVRI---PEAIHRFDQFTDYG-GGGFHPSGN-EVIINS-----EIWDMRTFKL 1295 (1516)
T ss_pred CCCcceEe---eCc--eeeeecc---HHHHhhhhhheecc-cccccCCCc-eEEeec-----hhhhhHHHHH
Confidence 99998776 355 5899994 46777776555333 335999974 455443 3899998753
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.00028 Score=75.49 Aligned_cols=127 Identities=15% Similarity=0.071 Sum_probs=79.5
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
+..++++ +.+|.++.||..+++. +.... .. .....+. .+..++.++.|
T Consensus 241 ~~~vy~~--~~~g~l~a~d~~tG~~-------------------------~W~~~-~~-~~~~p~~---~~~~vyv~~~~ 288 (377)
T TIGR03300 241 GGQVYAV--SYQGRVAALDLRSGRV-------------------------LWKRD-AS-SYQGPAV---DDNRLYVTDAD 288 (377)
T ss_pred CCEEEEE--EcCCEEEEEECCCCcE-------------------------EEeec-cC-CccCceE---eCCEEEEECCC
Confidence 4456666 6789999999988752 11111 00 1111222 23467777889
Q ss_pred ceEEEEecCCCcee-EEEE------e--cCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce
Q psy4510 679 RNIHIWTPREAGAW-SVYL------Y--TNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 749 (812)
Q Consensus 679 g~v~iWd~~~~~~~-~~~~------~--s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~ 749 (812)
|.|..+|..+|+.. .... . ...+..|++++.+|.|+++|..+++. +..+..+...+..--...+++
T Consensus 289 G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~----~~~~~~~~~~~~~sp~~~~~~- 363 (377)
T TIGR03300 289 GVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSF----VARLKTDGSGIASPPVVVGDG- 363 (377)
T ss_pred CeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCE----EEEEEcCCCccccCCEEECCE-
Confidence 99999999887643 2211 1 12467889999999999999998873 445554444333332233554
Q ss_pred eEEeeccCCceEEe
Q psy4510 750 VLASCSVDRSNRIG 763 (812)
Q Consensus 750 ~L~s~s~Dg~i~iW 763 (812)
|+.++.||.|..+
T Consensus 364 -l~v~~~dG~l~~~ 376 (377)
T TIGR03300 364 -LLVQTRDGDLYAF 376 (377)
T ss_pred -EEEEeCCceEEEe
Confidence 7788889988765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00021 Score=76.12 Aligned_cols=154 Identities=12% Similarity=0.108 Sum_probs=108.1
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
|...|.--++.- ...+|+.|+.-|.|++|+-..+.. ......+-.+.+..+..+++..++|+|+..|.|.++.+..
T Consensus 32 ~~~~v~lTc~ds-t~~~l~~GsS~G~lyl~~R~~~~~---~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~ 107 (726)
T KOG3621|consen 32 FPARVKLTCVDA-TEEYLAMGSSAGSVYLYNRHTGEM---RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNK 107 (726)
T ss_pred CcceEEEEEeec-CCceEEEecccceEEEEecCchhh---hcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhc
Confidence 445555555566 899999999999999998877653 3344455566677788899999999999999999999887
Q ss_pred CCCCCCCCCCceEE---cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 255 GKGPGIPTPPLFSF---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 255 ~~~~~~~~~~~~~~---~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
+. +....+.- +.|...|++++|++++ ..+.+|+..|.|.+-.+..........+.+..-.+.|-.+....
T Consensus 108 ~~----p~~~~~~t~~d~~~~~rVTal~Ws~~~-~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q-- 180 (726)
T KOG3621|consen 108 EL----PRDLDYVTPCDKSHKCRVTALEWSKNG-MKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ-- 180 (726)
T ss_pred cC----CCcceeeccccccCCceEEEEEecccc-cEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc--
Confidence 42 11111111 2377899999999999 89999999999999888873222222334444556676666553
Q ss_pred CeEEEEEE
Q psy4510 332 KRVLASCS 339 (812)
Q Consensus 332 ~~~l~s~~ 339 (812)
.++|++..
T Consensus 181 ~~LLVStl 188 (726)
T KOG3621|consen 181 SYLLVSTL 188 (726)
T ss_pred ceehHhhh
Confidence 33455444
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.6e-06 Score=82.58 Aligned_cols=215 Identities=14% Similarity=0.066 Sum_probs=148.5
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-CCcEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KRNIHI 299 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-dg~i~v 299 (812)
-|.+.|+.+.- .-.+++.+++.||.++.|--..-. ...-+..+..|.+.+.+++.+-++ .++.|++. |..+++
T Consensus 7 mhrd~i~hv~~-tka~fiiqASlDGh~KFWkKs~is----GvEfVKhFraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~Kv 80 (558)
T KOG0882|consen 7 MHRDVITHVFP-TKAKFIIQASLDGHKKFWKKSRIS----GVEFVKHFRAHLGVILSLAVSYDG-WLFRSVEDPDHSVKV 80 (558)
T ss_pred cccceeeeEee-ehhheEEeeecchhhhhcCCCCcc----ceeehhhhHHHHHHHHhhhccccc-eeEeeccCcccceeE
Confidence 36666666554 456789999999999999755411 234455677899999999999998 78888777 999999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
+|+.+-..... ..+..-.+.+.. ..+|... .+-++.-.+|.+.++|-+.... ....+..-|..+|.++.+++.
T Consensus 81 fDvEn~Dminm--iKL~~lPg~a~w-v~skGd~~s~IAVs~~~sg~i~VvD~~~d~~--q~~~fkklH~sPV~~i~y~qa 155 (558)
T KOG0882|consen 81 FDVENFDMINM--IKLVDLPGFAEW-VTSKGDKISLIAVSLFKSGKIFVVDGFGDFC--QDGYFKKLHFSPVKKIRYNQA 155 (558)
T ss_pred EEeeccchhhh--cccccCCCceEE-ecCCCCeeeeEEeecccCCCcEEECCcCCcC--ccceecccccCceEEEEeecc
Confidence 99987653211 111111222221 2233221 2334445689999999875332 233344679999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCC-CCC--CC---------ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 378 EPLIVSGGDDGCIHVWDLRR-FKK--GS---------SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~-~~~--~~---------~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+..+++....|.|.-|.... ++. .. -+..+.......++++|+|++ ..+.+-+.|..|+++++.+++
T Consensus 156 ~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g-~qistl~~DrkVR~F~~KtGk 234 (558)
T KOG0882|consen 156 GDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDG-AQISTLNPDRKVRGFVFKTGK 234 (558)
T ss_pred ccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcccc-CcccccCcccEEEEEEeccch
Confidence 99999999999999999872 111 11 111222335567899999997 588888899999999999987
Q ss_pred ch
Q psy4510 446 DS 447 (812)
Q Consensus 446 ~~ 447 (812)
..
T Consensus 235 lv 236 (558)
T KOG0882|consen 235 LV 236 (558)
T ss_pred hh
Confidence 54
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.4e-05 Score=85.09 Aligned_cols=184 Identities=13% Similarity=0.210 Sum_probs=131.6
Q ss_pred CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc
Q psy4510 234 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 234 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 313 (812)
.+..++-|+-...+..+|+.+. +......--.+.|.-++.+ + +.+.+|...|+|.+-|+++.+ ...
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~-------~e~r~~~v~a~~v~imR~N--n-r~lf~G~t~G~V~LrD~~s~~----~ih 211 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTE-------KETRTTNVSASGVTIMRYN--N-RNLFCGDTRGTVFLRDPNSFE----TIH 211 (1118)
T ss_pred CCcceeecchhhheeeeecccc-------eeeeeeeccCCceEEEEec--C-cEEEeecccceEEeecCCcCc----eee
Confidence 3456677777777888888774 3333333233345555544 3 789999999999999999887 688
Q ss_pred cccCCCCCEEEEEEcCCCCeEEEEEEC---------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEE
Q psy4510 314 PLVGHTNSVEDLQWSPGEKRVLASCSV---------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVS 383 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s 383 (812)
.+..|++.|.++... |+ +|++|+. |..|++||+|......++ .-+-+ -.-+.|+|.-. .+++
T Consensus 212 t~~aHs~siSDfDv~--GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI----~~~~~-P~flrf~Psl~t~~~V 283 (1118)
T KOG1275|consen 212 TFDAHSGSISDFDVQ--GN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI----QFPYG-PQFLRFHPSLTTRLAV 283 (1118)
T ss_pred eeeccccceeeeecc--CC-eEEEeecccccccccccchhhhhhhhhhhccCCc----ccccC-chhhhhcccccceEEE
Confidence 999999999987664 55 6888875 567899999965433332 22222 25678888764 8888
Q ss_pred EeCCCcEEEEecCCCCCC-CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 384 GGDDGCIHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
++..|...+-|....... ..+..+......+.++.+++++ ..++.|..+|.|.+|-
T Consensus 284 ~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~-~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 284 TSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNG-DALAFGDHEGHVNLWA 340 (1118)
T ss_pred EecccceeeccccccCCCccceeEEccCCCcceeEEecCCC-ceEEEecccCcEeeec
Confidence 999999999994432222 2334444445669999999987 6999999999999998
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.9e-05 Score=81.21 Aligned_cols=189 Identities=16% Similarity=0.203 Sum_probs=127.5
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..++|++++. ..|+-|..+|.|++.+..... .....|... .-.|. .++|||.||+|.|-.+-+.
T Consensus 40 D~is~~av~~---~~~~~GtH~g~v~~~~~~~~~------~~~~~~s~~------~~~Ge-y~asCS~DGkv~I~sl~~~ 103 (846)
T KOG2066|consen 40 DAISCCAVHD---KFFALGTHRGAVYLTTCQGNP------KTNFDHSSS------ILEGE-YVASCSDDGKVVIGSLFTD 103 (846)
T ss_pred hHHHHHHhhc---ceeeeccccceEEEEecCCcc------ccccccccc------ccCCc-eEEEecCCCcEEEeeccCC
Confidence 4456666654 689999999999999976542 233335443 55677 5999999999999988753
Q ss_pred CcccceeecCCcCCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRT-----EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~-----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
... +.. ....++.+++++|+ .+.+++||.-| +.++.-+-++....+ .+..-.++|.++.|.. +++
T Consensus 104 ~~~-~~~----df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~g---~lI 173 (846)
T KOG2066|consen 104 DEI-TQY----DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWRG---NLI 173 (846)
T ss_pred ccc-eeE----ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEecC---cEE
Confidence 321 122 23578999999998 34899999999 888776544333333 4556689999999983 578
Q ss_pred EEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 428 ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
|-++.+| |++||+...+.. ..+|++. .......-...+.|.+. ..++.+-.+.+.++...
T Consensus 174 AWand~G-v~vyd~~~~~~l---------~~i~~p~-~~~R~e~fpphl~W~~~--~~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 174 AWANDDG-VKVYDTPTRQRL---------TNIPPPS-QSVRPELFPPHLHWQDE--DRLVIGWGDSVKICSIK 233 (846)
T ss_pred EEecCCC-cEEEecccccee---------eccCCCC-CCCCcccCCCceEecCC--CeEEEecCCeEEEEEEe
Confidence 8888776 999999887531 2222221 00001112456778877 56777777777777655
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.0008 Score=66.33 Aligned_cols=229 Identities=16% Similarity=0.138 Sum_probs=141.5
Q ss_pred EEEeCCCCCCeEEEecCCCc-EEEEccCCCCcccc----cccccCCCCCCeeeeeEcCCCCcEEEeeC-----CCceEEe
Q psy4510 181 AMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQV----DQKPLGGHTNSAEDLQWSDLKTALQTVDD-----PFQLAEH 250 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~-v~iwd~~~~~~~~~----~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-----d~~i~vw 250 (812)
.++.+|..+..+|.+-.-|+ ..+||..++..... .-+.|.+| -+||+||++|.+... .|.|-||
T Consensus 9 ~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG~~LytTEnd~~~g~G~IgVy 82 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDGRLLYTTENDYETGRGVIGVY 82 (305)
T ss_pred ceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecC------EEEcCCCCEEEEeccccCCCcEEEEEE
Confidence 46677756666777755554 57888887764321 12334444 589999999998754 4779999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC------------------CCcEEEEeCCCCCcceecc
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC------------------KRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~------------------dg~i~vwd~~~~~~~~~~~ 312 (812)
|...+ .+.+..+..|.-.-..+.+.|++ ..|+.+.- +.++..-|..++.. ..+
T Consensus 83 d~~~~------~~ri~E~~s~GIGPHel~l~pDG-~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~l--l~q 153 (305)
T PF07433_consen 83 DAARG------YRRIGEFPSHGIGPHELLLMPDG-ETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGAL--LEQ 153 (305)
T ss_pred ECcCC------cEEEeEecCCCcChhhEEEcCCC-CEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCce--eee
Confidence 99853 57777788887777889999998 45555421 12333444444441 112
Q ss_pred ccc--cCCCCCEEEEEEcCCCCeEEEEEECCC-------eEEEEECCCCCcccceeec----CCcCCCCeEEEEEcCCCC
Q psy4510 313 KPL--VGHTNSVEDLQWSPGEKRVLASCSVDL-------SIRIWDTRVINTKSCMLTL----PNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 313 ~~~--~~h~~~v~~~~~~p~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~----~~~~~~~v~~l~~~~~~~ 379 (812)
..+ .-|.-+|..+++.++|. +++.+-..| -|-+++... ....... ...-...+-+|++++++.
T Consensus 154 ~~Lp~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g~---~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~ 229 (305)
T PF07433_consen 154 VELPPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRGG---ALRLLPAPEEQWRRLNGYIGSIAADRDGR 229 (305)
T ss_pred eecCccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEcCCC---cceeccCChHHHHhhCCceEEEEEeCCCC
Confidence 234 34778999999999987 444433332 233443321 0111111 012346789999999998
Q ss_pred EE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 380 LI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 380 ~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
++ +|+-..+.+.+||.. ++..+.... -..+..++-.+++ ++++.+. |.+
T Consensus 230 ~ia~tsPrGg~~~~~d~~---tg~~~~~~~--l~D~cGva~~~~~--f~~ssG~-G~~ 279 (305)
T PF07433_consen 230 LIAVTSPRGGRVAVWDAA---TGRLLGSVP--LPDACGVAPTDDG--FLVSSGQ-GQL 279 (305)
T ss_pred EEEEECCCCCEEEEEECC---CCCEeeccc--cCceeeeeecCCc--eEEeCCC-ccE
Confidence 55 555567899999997 455555443 2345677766653 5666554 544
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.24 E-value=0.00017 Score=71.00 Aligned_cols=204 Identities=12% Similarity=0.087 Sum_probs=125.3
Q ss_pred CCCCCCccCcCCCCCceEEEEeCCCCCCeEEEe-----cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCc
Q psy4510 163 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTA 237 (812)
Q Consensus 163 ~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~-----~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~ 237 (812)
.+....=+||.|| ..||| +|++|.|. ...|.|-|||....- ..+..+..|.-.-..+.+.|||+.
T Consensus 43 ~~~a~~gRHFyGH------g~fs~-dG~~LytTEnd~~~g~G~IgVyd~~~~~---~ri~E~~s~GIGPHel~l~pDG~t 112 (305)
T PF07433_consen 43 RLWAPPGRHFYGH------GVFSP-DGRLLYTTENDYETGRGVIGVYDAARGY---RRIGEFPSHGIGPHELLLMPDGET 112 (305)
T ss_pred EEcCCCCCEEecC------EEEcC-CCCEEEEeccccCCCcEEEEEEECcCCc---EEEeEecCCCcChhhEEEcCCCCE
Confidence 3445667789899 78999 99999875 556899999998322 155667777767777889999988
Q ss_pred EEEeeC-------CC-----------ceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEEeCCC--
Q psy4510 238 LQTVDD-------PF-----------QLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATGDCKR-- 295 (812)
Q Consensus 238 l~s~~~-------d~-----------~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg~~dg-- 295 (812)
|+.+.. .| ++..-|..+| .......+ .-|.-.|..|++.++| ..++..-..|
T Consensus 113 LvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG-----~ll~q~~Lp~~~~~lSiRHLa~~~~G-~V~~a~Q~qg~~ 186 (305)
T PF07433_consen 113 LVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSG-----ALLEQVELPPDLHQLSIRHLAVDGDG-TVAFAMQYQGDP 186 (305)
T ss_pred EEEEcCCCccCcccCceecChhhcCCceEEEecCCC-----ceeeeeecCccccccceeeEEecCCC-cEEEEEecCCCC
Confidence 877631 11 1333333333 11111223 3366678888888886 4444433322
Q ss_pred -----cEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCe
Q psy4510 296 -----NIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369 (812)
Q Consensus 296 -----~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v 369 (812)
.|-+++....-. ..........-.+.|-+|++++++..+.+|+-.-+.+.+||..++. .+.. ..-..+
T Consensus 187 ~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~---~~~~---~~l~D~ 260 (305)
T PF07433_consen 187 GDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGR---LLGS---VPLPDA 260 (305)
T ss_pred CccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCC---Eeec---cccCce
Confidence 233343332110 0001111234557899999999999777888889999999998533 2322 234567
Q ss_pred EEEEEcCCCCEEEEEeCCCcE
Q psy4510 370 NVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i 390 (812)
..++-.+++ ++++.+. |.+
T Consensus 261 cGva~~~~~-f~~ssG~-G~~ 279 (305)
T PF07433_consen 261 CGVAPTDDG-FLVSSGQ-GQL 279 (305)
T ss_pred eeeeecCCc-eEEeCCC-ccE
Confidence 777777766 5665544 443
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.2e-05 Score=78.91 Aligned_cols=116 Identities=21% Similarity=0.311 Sum_probs=81.0
Q ss_pred EEEEEEcCCCCeEEEEE----ECCCe----EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 322 VEDLQWSPGEKRVLASC----SVDLS----IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~----~~dg~----i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
..++.|+-..++.+.+. +.+|. -++|++...+ .+++....-...+.|.|++++|+...++.|+.||.|.+|
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~k-lqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLy 286 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNK-LQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILY 286 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCc-eeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEE
Confidence 35666665444444443 22332 3566665332 223333334678899999999999999999999999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|... .+..+....-..+.++|||+| .++++|+..|.+.+||+...
T Consensus 287 D~~~-----~~t~~~ka~~~P~~iaWHp~g-ai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 287 DTTR-----GVTLLAKAEFIPTLIAWHPDG-AIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred EcCC-----CeeeeeeecccceEEEEcCCC-cEEEEEcCCceEEEEEeecC
Confidence 9863 233333344567889999997 59999999999999999865
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.9e-07 Score=93.41 Aligned_cols=207 Identities=20% Similarity=0.292 Sum_probs=135.9
Q ss_pred CcEEEEEecCCCC-CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE----CCCeEEEE
Q psy4510 273 TEGFAMDWSSTEP-GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS----VDLSIRIW 347 (812)
Q Consensus 273 ~~v~~l~~sp~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~----~dg~i~iw 347 (812)
..+.|++++-+.. -+++.|..+|.|-+-.++..... ......+|...+++++|++-..++||.|- .|..+.||
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS--s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS--SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccc--cceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 3456777665442 57899999999999988765421 12345668889999999998777777773 36789999
Q ss_pred ECCCCCcc-cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|+.+.-+. ..-..+..+.....++++|-.+.+++.+|.....++++|+|. .......-.+..+..+...|-...+
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRq----s~~~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQ----SLDSVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhh----hhhhhhhhhhhhcccceecCCCCCc
Confidence 99864211 111112122445677999998888999999999999999984 1122222234456677778855567
Q ss_pred EEEEECCCCEEEEEc-CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 427 FASGGADDQIALWDL-AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 427 l~s~~~dg~v~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
+++-. ||.|.+||. ...... .......... ....+..++|.|..++++++...+...++
T Consensus 211 ~cs~~-dg~iAiwD~~rnienp-l~~i~~~~N~----------~~~~l~~~aycPtrtglla~l~RdS~tIr 270 (783)
T KOG1008|consen 211 FCSNS-DGDIAIWDTYRNIENP-LQIILRNENK----------KPKQLFALAYCPTRTGLLAVLSRDSITIR 270 (783)
T ss_pred eeccc-cCceeeccchhhhccH-HHHHhhCCCC----------cccceeeEEeccCCcchhhhhccCcceEE
Confidence 77766 899999994 332211 0000000000 01258899999999999998887765444
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.3e-05 Score=76.49 Aligned_cols=226 Identities=10% Similarity=0.046 Sum_probs=147.7
Q ss_pred CCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecC-CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-c
Q psy4510 160 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-A 237 (812)
Q Consensus 160 ~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~-dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~ 237 (812)
+.++-...-+.|+..|...|.+++.+- ++.++.|.+. |..++++|+.+-.-.. ...+.--.+.+..+.-.-+.. .
T Consensus 37 Ks~isGvEfVKhFraHL~~I~sl~~S~-dg~L~~Sv~d~Dhs~KvfDvEn~Dmin--miKL~~lPg~a~wv~skGd~~s~ 113 (558)
T KOG0882|consen 37 KSRISGVEFVKHFRAHLGVILSLAVSY-DGWLFRSVEDPDHSVKVFDVENFDMIN--MIKLVDLPGFAEWVTSKGDKISL 113 (558)
T ss_pred CCCccceeehhhhHHHHHHHHhhhccc-cceeEeeccCcccceeEEEeeccchhh--hcccccCCCceEEecCCCCeeee
Confidence 334334567888888999999999988 9999999777 9999999988754221 111111111111111111111 2
Q ss_pred EEEe-eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-------ce
Q psy4510 238 LQTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------WQ 309 (812)
Q Consensus 238 l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-------~~ 309 (812)
|+.+ -.++.+.|+|-... .......-.-|..+|..+.++|.+ ..+++....|.|.-|.....-+ +.
T Consensus 114 IAVs~~~sg~i~VvD~~~d-----~~q~~~fkklH~sPV~~i~y~qa~-Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~ 187 (558)
T KOG0882|consen 114 IAVSLFKSGKIFVVDGFGD-----FCQDGYFKKLHFSPVKKIRYNQAG-DSAVSIDISGMVEYWSAEGPFQFPRTNLNFE 187 (558)
T ss_pred EEeecccCCCcEEECCcCC-----cCccceecccccCceEEEEeeccc-cceeeccccceeEeecCCCcccCcccccccc
Confidence 3322 36788999997764 235556666799999999999998 7899999999999999874110 00
Q ss_pred ----eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--------------------------
Q psy4510 310 ----VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-------------------------- 359 (812)
Q Consensus 310 ----~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------------- 359 (812)
.....+........++.|+|++.. +.+-+.|..|++++.+++...+.+-
T Consensus 188 ~K~eTdLy~f~K~Kt~pts~Efsp~g~q-istl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRma 266 (558)
T KOG0882|consen 188 LKHETDLYGFPKAKTEPTSFEFSPDGAQ-ISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMA 266 (558)
T ss_pred ccccchhhcccccccCccceEEccccCc-ccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhh
Confidence 011222334567889999999995 8888899999999988643221110
Q ss_pred ---ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 360 ---TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 360 ---~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
.+.......-+.+.|...+++|+-|+-=| |++.++.
T Consensus 267 verelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~ 305 (558)
T KOG0882|consen 267 VERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLD 305 (558)
T ss_pred HHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEee
Confidence 00011112334567888888888887665 7888876
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.00054 Score=77.57 Aligned_cols=205 Identities=15% Similarity=0.223 Sum_probs=132.7
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC-
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP- 302 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~- 302 (812)
..|.++.|..++..++.+...|.|.+-|..+. ..-....-...|.+++|||+. ..++..+..+++.+-+-
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~--------~~eivg~vd~GI~aaswS~De-e~l~liT~~~tll~mT~~ 139 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETL--------ELEIVGNVDNGISAASWSPDE-ELLALITGRQTLLFMTKD 139 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEccccc--------ceeeeeeccCceEEEeecCCC-cEEEEEeCCcEEEEEecc
Confidence 67889999999999999999999999887763 222223345789999999999 78777777777776432
Q ss_pred ---CCCCc---------------ceeccccccCCC---------------------CCEEEEEEcCCCCeEEEEEE----
Q psy4510 303 ---REAGA---------------WQVDQKPLVGHT---------------------NSVEDLQWSPGEKRVLASCS---- 339 (812)
Q Consensus 303 ---~~~~~---------------~~~~~~~~~~h~---------------------~~v~~~~~~p~~~~~l~s~~---- 339 (812)
-.... |......+.|.. +.=+.|.|.-+|. +||+..
T Consensus 140 f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~-~fAVs~~~~~ 218 (1265)
T KOG1920|consen 140 FEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGE-YFAVSFVESE 218 (1265)
T ss_pred ccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCc-EEEEEEEecc
Confidence 11000 100011121111 1123589999998 466621
Q ss_pred CC-CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 340 VD-LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG---DDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 340 ~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
.+ +.|++||.. +. +........+--.+++|-|.|.++++-. .|+.|.+|.......+.....+.....+|.
T Consensus 219 ~~~RkirV~drE-g~----Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve 293 (1265)
T KOG1920|consen 219 TGTRKIRVYDRE-GA----LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVE 293 (1265)
T ss_pred CCceeEEEeccc-ch----hhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchh
Confidence 23 799999976 11 1111122233446899999999888754 456799998765444444444454555699
Q ss_pred EEEEccCCCcEEEE---EECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFAS---GGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s---~~~dg~v~iwd~~~~ 444 (812)
.++|+.+. .+|++ ......|++|-+.+.
T Consensus 294 ~L~Wns~s-diLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 294 ELAWNSNS-DILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred eeeecCCC-CceeeeecccccceEEEEEecCe
Confidence 99999986 57776 444455999988765
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0025 Score=68.23 Aligned_cols=229 Identities=7% Similarity=0.013 Sum_probs=124.5
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.++.+++++.+|.|.-+|..+++.. -...-........+ .++..++.++.++.+..+|..+| +.+..
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~----W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG-------~~~W~ 130 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRL----WRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDG-------KELWR 130 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEe----eeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCC-------cEeee
Confidence 4567788888899999998877631 11111111111222 24667888888999999999886 33333
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
.... +.+.+.-.. .+ ..++.++.+|.|..||..+++. |......- ...... ...... + . .++.+..+|.+.
T Consensus 131 ~~~~-~~~~~~p~v-~~-~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~-~sp~~~-~-~-~v~~~~~~g~v~ 203 (377)
T TIGR03300 131 AKLS-SEVLSPPLV-AN-GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGS-ASPVIA-D-G-GVLVGFAGGKLV 203 (377)
T ss_pred eccC-ceeecCCEE-EC-CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCC-CCCEEE-C-C-EEEEECCCCEEE
Confidence 2211 222211111 13 5677778899999999988763 21111000 000000 011111 2 3 467788889999
Q ss_pred EEECCCCCcccceeecCCcCC-CC---eEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 346 IWDTRVINTKSCMLTLPNAHT-SD---VNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~-~~---v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
.+|++++...... ....... .. +..+.-+| .+..+++++.+|.+..||.. +++.+..... ........
T Consensus 204 ald~~tG~~~W~~-~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~---tG~~~W~~~~--~~~~~p~~ 277 (377)
T TIGR03300 204 ALDLQTGQPLWEQ-RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLR---SGRVLWKRDA--SSYQGPAV 277 (377)
T ss_pred EEEccCCCEeeee-ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECC---CCcEEEeecc--CCccCceE
Confidence 9998865432111 1100000 00 00010011 24577778889999999997 4555554431 11122222
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+ ..++.++.+|.|..+|..+++
T Consensus 278 --~~-~~vyv~~~~G~l~~~d~~tG~ 300 (377)
T TIGR03300 278 --DD-NRLYVTDADGVVVALDRRSGS 300 (377)
T ss_pred --eC-CEEEEECCCCeEEEEECCCCc
Confidence 23 367777889999999998774
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00059 Score=74.36 Aligned_cols=201 Identities=7% Similarity=0.064 Sum_probs=133.0
Q ss_pred eEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc-----EEEEeCCC
Q psy4510 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN-----IHIWTPRE 304 (812)
Q Consensus 230 ~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~-----i~vwd~~~ 304 (812)
+|++.+..++.|+.+|.|.+.+-.- +.++.+..+...+...-|.-++..+|++-+.|+. |+||+++.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~--------~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek 101 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSF--------QLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK 101 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccc--------eeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc
Confidence 3458888899999999988877432 4456677777664444444454467888777654 89999876
Q ss_pred CCcce--ecc---c----cccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 305 AGAWQ--VDQ---K----PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 305 ~~~~~--~~~---~----~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
..... .+. + .......++.+++.+.+-+ .+|+|-.+|.|..+.-.-................+|+.+++.
T Consensus 102 ~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~-~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~ 180 (933)
T KOG2114|consen 102 VDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLK-TIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALR 180 (933)
T ss_pred cCCCCCcceeeeeeeeccCCCCCCCcceEEEEEcccc-EEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEe
Confidence 53211 111 1 1112356789999999877 589999999999985432111212222324457789999999
Q ss_pred CCCCE-EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 376 RTEPL-IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 376 ~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.++.. +++++ -..|.+|.+.. ....+..+..|..++.|..+++... .|++++. ..|.+|+....
T Consensus 181 ~d~~s~lFv~T-t~~V~~y~l~g--r~p~~~~ld~~G~~lnCss~~~~t~-qfIca~~-e~l~fY~sd~~ 245 (933)
T KOG2114|consen 181 SDGKSVLFVAT-TEQVMLYSLSG--RTPSLKVLDNNGISLNCSSFSDGTY-QFICAGS-EFLYFYDSDGR 245 (933)
T ss_pred cCCceeEEEEe-cceeEEEEecC--CCcceeeeccCCccceeeecCCCCc-cEEEecC-ceEEEEcCCCc
Confidence 98874 33333 45799999973 2223555788889999999998643 3555554 45999998765
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00063 Score=72.61 Aligned_cols=122 Identities=14% Similarity=0.083 Sum_probs=90.9
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
|...|.--+++..+++++.|+..|.+.+|+-..+. .......+-.+.+..+..|+.. .++|.|+..|.|.++-
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~------~~~~~~~~~~~~~~~~~vs~~e-~lvAagt~~g~V~v~q 104 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGE------MRKLKNEGATGITCVRSVSSVE-YLVAAGTASGRVSVFQ 104 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchh------hhcccccCccceEEEEEecchh-HhhhhhcCCceEEeeh
Confidence 33445555666889999999999999999987752 2333344455667778888887 7899999999999999
Q ss_pred CCCCCcce-eccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 302 PREAGAWQ-VDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 302 ~~~~~~~~-~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
+....... .....+ +.|...|++++|++++.. +.+|..-|+|.+-.+..
T Consensus 105 l~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k-~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 105 LNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMK-LYSGDSQGKVVLTELDS 155 (726)
T ss_pred hhccCCCcceeeccccccCCceEEEEEecccccE-EeecCCCceEEEEEech
Confidence 88754211 111111 337889999999999996 99999999999888874
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00081 Score=70.79 Aligned_cols=114 Identities=21% Similarity=0.240 Sum_probs=80.0
Q ss_pred EEEEEecCCCCCEEEEE----eCCCc----EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 275 GFAMDWSSTEPGVLATG----DCKRN----IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg----~~dg~----i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
..++.||-..+..+.+. +.+|. -++|++...+...+... -....+.|.+++++|++. .|+.|+.||+|.+
T Consensus 208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvt-sipL~s~v~~ca~sp~E~-kLvlGC~DgSiiL 285 (545)
T PF11768_consen 208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVT-SIPLPSQVICCARSPSED-KLVLGCEDGSIIL 285 (545)
T ss_pred cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEE-EEecCCcceEEecCcccc-eEEEEecCCeEEE
Confidence 35667776554555443 22343 34677665543222222 234677899999999999 5999999999999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
||...+-+. . ....-..+.++|+|+|.++++|+..|.+.+||+.
T Consensus 286 yD~~~~~t~-----~-~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 286 YDTTRGVTL-----L-AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred EEcCCCeee-----e-eeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 998743221 1 1234557899999999999999999999999996
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00075 Score=71.71 Aligned_cols=167 Identities=17% Similarity=0.136 Sum_probs=96.7
Q ss_pred eEEcCCCCcEEEEEecCCCCCEEEEEeCC---CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 266 ~~~~~h~~~v~~l~~sp~~~~~l~sg~~d---g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
..+..-...+..-+|+|++..+....-.. ..+.++++.++....+ ..+ .+.-..-+|+|+|+.++++...||
T Consensus 186 ~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i--~~~---~g~~~~P~fspDG~~l~f~~~rdg 260 (425)
T COG0823 186 QKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVI--LNF---NGNNGAPAFSPDGSKLAFSSSRDG 260 (425)
T ss_pred eEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCcccee--ecc---CCccCCccCCCCCCEEEEEECCCC
Confidence 33444455677889999985543332222 3599999998874222 223 334456789999999888888888
Q ss_pred eEEEE--ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 343 SIRIW--DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 343 ~i~iw--d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
...|| |+.... +..+ ....+.-..-.|+|+|+.++ +.+..|.-.||-+.. .+.....+....+.-..-.|
T Consensus 261 ~~~iy~~dl~~~~----~~~L-t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~--~g~~~~riT~~~~~~~~p~~ 333 (425)
T COG0823 261 SPDIYLMDLDGKN----LPRL-TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDL--EGSQVTRLTFSGGGNSNPVW 333 (425)
T ss_pred CccEEEEcCCCCc----ceec-ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECC--CCCceeEeeccCCCCcCccC
Confidence 76555 555433 2222 12222223678999999554 445566655554443 23333333333333237789
Q ss_pred ccCCCcEEEEEECCCC--EEEEEcCCC
Q psy4510 420 HPTESSTFASGGADDQ--IALWDLAVE 444 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~--v~iwd~~~~ 444 (812)
+|+|..+++....+|. |.+.|+...
T Consensus 334 SpdG~~i~~~~~~~g~~~i~~~~~~~~ 360 (425)
T COG0823 334 SPDGDKIVFESSSGGQWDIDKNDLASG 360 (425)
T ss_pred CCCCCEEEEEeccCCceeeEEeccCCC
Confidence 9998655555533455 455555444
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0079 Score=63.41 Aligned_cols=276 Identities=12% Similarity=0.118 Sum_probs=144.2
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC-------C---------CCCeeeeeEcCCCCcEE
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG-------H---------TNSAEDLQWSDLKTALQ 239 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~-------h---------~~~V~~l~~s~~~~~l~ 239 (812)
...+..+.||| +|+.||-.. ++.|.+++..++.. ...+..| - -+.-.++.||||+++||
T Consensus 42 ~~~~~~~~~sP-~g~~~~~v~-~~nly~~~~~~~~~---~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la 116 (353)
T PF00930_consen 42 PPKLQDAKWSP-DGKYIAFVR-DNNLYLRDLATGQE---TQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLA 116 (353)
T ss_dssp ETTBSEEEE-S-SSTEEEEEE-TTEEEEESSTTSEE---EESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEE
T ss_pred ccccccceeec-CCCeeEEEe-cCceEEEECCCCCe---EEeccccceeEEcCccceeccccccccccceEECCCCCEEE
Confidence 35566799999 999998876 46899998876632 1122222 1 12235788999999999
Q ss_pred EeeC-CCceEEeeCCCCCCCCCCCCCceEEcCCC---CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc-c
Q psy4510 240 TVDD-PFQLAEHNKKRGKGPGIPTPPLFSFSGHL---TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK-P 314 (812)
Q Consensus 240 s~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-~ 314 (812)
.... +..++.+.+.. ..... -.+..+.+-.-|. -... -.+.|+++.+++...+... .
T Consensus 117 ~~~~d~~~v~~~~~~~-------------~~~~~~~yp~~~~~~YPk~G~-~np~----v~l~v~~~~~~~~~~~~~~~~ 178 (353)
T PF00930_consen 117 FLRFDEREVPEYPLPD-------------YSPPDSQYPEVESIRYPKAGD-PNPR----VSLFVVDLASGKTTELDPPNS 178 (353)
T ss_dssp EEEEE-TTS-EEEEEE-------------ESSSTESS-EEEEEE--BTTS----E----EEEEEEESSSTCCCEE---HH
T ss_pred EEEECCcCCceEEeec-------------cCCccccCCcccccccCCCCC-cCCc----eEEEEEECCCCcEEEeeeccc
Confidence 8763 33333333221 11111 1344555533331 1111 2466788877763211111 2
Q ss_pred ccCCCCCEEEEEEcCCCCeEE-EEEECCC---eEEEEECCCCCcccceeecCCcCCCCeEEEEEc-CCCC-EEEEEeCCC
Q psy4510 315 LVGHTNSVEDLQWSPGEKRVL-ASCSVDL---SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEP-LIVSGGDDG 388 (812)
Q Consensus 315 ~~~h~~~v~~~~~~p~~~~~l-~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~-~l~sg~~dg 388 (812)
+..-...+..+.|.+++..++ .....+. .+.++|..++...........+--..-..+.|. +++. ++.....+|
T Consensus 179 ~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G 258 (353)
T PF00930_consen 179 LNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG 258 (353)
T ss_dssp HHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS
T ss_pred cCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC
Confidence 233456789999999988433 3333333 456677765433222221111111122345554 6665 666666888
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEE-EEEccCCCcEEEEEECCC----CEEEEEcC-CCCchhHHHhhhhhccCCCc
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHPTESSTFASGGADD----QIALWDLA-VERDSEIEQREAELKDLPSQ 462 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~l~s~~~dg----~v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 462 (812)
.-+|+-+.. .+.....+....-.|+. +.|.+.+..+..++..++ .|..-++. .. .
T Consensus 259 ~~hly~~~~--~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~-----------------~ 319 (353)
T PF00930_consen 259 YRHLYLYDL--DGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGG-----------------E 319 (353)
T ss_dssp SEEEEEEET--TSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETT-----------------E
T ss_pred CcEEEEEcc--cccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCC-----------------C
Confidence 766666553 34445566655666755 677888766666776533 34444444 22 2
Q ss_pred eEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 463 LLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 463 ~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
+.........-..+.|+|++..++..++.-+
T Consensus 320 ~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~ 350 (353)
T PF00930_consen 320 PKCLTCEDGDHYSASFSPDGKYYVDTYSGPD 350 (353)
T ss_dssp EEESSTTSSTTEEEEE-TTSSEEEEEEESSS
T ss_pred eEeccCCCCCceEEEECCCCCEEEEEEcCCC
Confidence 2222222222268999999888877776543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.001 Score=70.70 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=117.5
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEee---CC-CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVD---DP-FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~---~d-~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+..-...+..-+|+|+++.++-.+ .. ..+.++++.++ ....+..+.++. ..-+|+|+|+.++++...|
T Consensus 188 l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g-----~~~~i~~~~g~~---~~P~fspDG~~l~f~~~rd 259 (425)
T COG0823 188 LTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTG-----KRPVILNFNGNN---GAPAFSPDGSKLAFSSSRD 259 (425)
T ss_pred ecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCC-----ccceeeccCCcc---CCccCCCCCCEEEEEECCC
Confidence 334445677788999999876553 22 45888999887 334444555544 4678999997778888888
Q ss_pred CcEEEE--eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIW--TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vw--d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
|...|| |+.... ...+....+.-..-.|+|+|+.+.++.+..|.-.||-...........+. . ...-..-
T Consensus 260 g~~~iy~~dl~~~~-----~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~-~--~~~~~~p 331 (425)
T COG0823 260 GSPDIYLMDLDGKN-----LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF-S--GGGNSNP 331 (425)
T ss_pred CCccEEEEcCCCCc-----ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec-c--CCCCcCc
Confidence 876655 555443 22233333333467899999998888888887676655433222222332 1 1222277
Q ss_pred EEcCCCCEEEEEeC-CCc--EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 373 SWNRTEPLIVSGGD-DGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 373 ~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
.|+|+|.+|+..+. +|. |.+.|+.. +..+..+. +......-.|.|++..++.+++.
T Consensus 332 ~~SpdG~~i~~~~~~~g~~~i~~~~~~~---~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 332 VWSPDGDKIVFESSSGGQWDIDKNDLAS---GGKIRILT-STYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred cCCCCCCEEEEEeccCCceeeEEeccCC---CCcEEEcc-ccccCCCCCcCCCCceEEEeccC
Confidence 89999997766654 344 55666653 22133322 33344456777877544444443
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.022 Score=53.60 Aligned_cols=110 Identities=12% Similarity=0.013 Sum_probs=74.4
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
...++.+.+++.|+..+.+.--|..+++... . ..-..++.+-+.- -|.+++.|...|.+++.+.. ++....
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~W---e--~ilg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~---tGs~~w 87 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIW---E--AILGVRIECSAIV-VGDFVVLGCYSGGLYFLCVK---TGSQIW 87 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEe---e--hhhCceeeeeeEE-ECCEEEEEEccCcEEEEEec---chhhee
Confidence 3445566688899999999988888654322 1 1223334433322 46789999999999999997 565666
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+..-..--.+....+++ .++..|+.|+.....|..+..
T Consensus 88 ~f~~~~~vk~~a~~d~~~-glIycgshd~~~yalD~~~~~ 126 (354)
T KOG4649|consen 88 NFVILETVKVRAQCDFDG-GLIYCGSHDGNFYALDPKTYG 126 (354)
T ss_pred eeeehhhhccceEEcCCC-ceEEEecCCCcEEEecccccc
Confidence 665433222233455665 699999999999999988774
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.015 Score=61.42 Aligned_cols=262 Identities=13% Similarity=0.113 Sum_probs=127.3
Q ss_pred cCCCCcEEEee---------CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 232 SDLKTALQTVD---------DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 232 s~~~~~l~s~~---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
|||+++++... ..+.+.++|+.++ .+..+......+....|||+| ..++-.. ++.|.+++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~--------~~~~l~~~~~~~~~~~~sP~g-~~~~~v~-~~nly~~~~ 70 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETG--------EITPLTPPPPKLQDAKWSPDG-KYIAFVR-DNNLYLRDL 70 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTT--------EEEESS-EETTBSEEEE-SSS-TEEEEEE-TTEEEEESS
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCC--------ceEECcCCccccccceeecCC-CeeEEEe-cCceEEEEC
Confidence 46777666532 3356889999884 222232225678899999998 6666664 588999988
Q ss_pred CCCCcceeccccccC-------C---------CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC
Q psy4510 303 REAGAWQVDQKPLVG-------H---------TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~-------h---------~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 366 (812)
.++... ..+..| - -+.-..+-|+|++++++..--.+..|+.+.+-....... .-
T Consensus 71 ~~~~~~---~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~-------~y 140 (353)
T PF00930_consen 71 ATGQET---QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS-------QY 140 (353)
T ss_dssp TTSEEE---ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE-------SS
T ss_pred CCCCeE---EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc-------cC
Confidence 766321 111111 0 122357889999997655555566665555421100000 01
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc---ccCCCCEEEEEEccCCCcEEE-EEECCC---CEEEE
Q psy4510 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF---KHHTAPVTTVEWHPTESSTFA-SGGADD---QIALW 439 (812)
Q Consensus 367 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~-s~~~dg---~v~iw 439 (812)
..+..+.+-.-|.-... -.+.|+|+...+.. .+... ..-...+..+.|.+++..+++ ....+. .+.+.
T Consensus 141 p~~~~~~YPk~G~~np~----v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~ 215 (353)
T PF00930_consen 141 PEVESIRYPKAGDPNPR----VSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLC 215 (353)
T ss_dssp -EEEEEE--BTTS---E----EEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEE
T ss_pred CcccccccCCCCCcCCc----eEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEE
Confidence 13445554333322111 13677888642211 12211 233556889999998742333 333333 35666
Q ss_pred EcCCCCchhHHHhhhhhccCCCceEEeecCCC---ceeEEEEc-CCCCCEEEEEeCCCe-EEEEeCCCCCcccEEeecCC
Q psy4510 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQK---EIKELHWH-PQLPGTIISTANSGF-NIFRTISDLPSQLLFIHLGQ 514 (812)
Q Consensus 440 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~-p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 514 (812)
|..+... .+........ ....+.+. +++..++.....+|. +++..... .........+.
T Consensus 216 d~~tg~~---------------~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~-~~~~~~lT~G~ 279 (353)
T PF00930_consen 216 DASTGET---------------RVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLD-GGKPRQLTSGD 279 (353)
T ss_dssp EECTTTC---------------EEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETT-SSEEEESS-SS
T ss_pred ECCCCce---------------eEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccc-ccceeccccCc
Confidence 7766532 2222222222 12345554 666666666666665 33333222 22233334445
Q ss_pred CCeeE-EEEcCCCCCeEEEee
Q psy4510 515 KEIKE-LHWHPQLPGTIISTA 534 (812)
Q Consensus 515 ~~i~~-~~~~p~~~~~~i~~~ 534 (812)
-.|.. +.++++....+..+.
T Consensus 280 ~~V~~i~~~d~~~~~iyf~a~ 300 (353)
T PF00930_consen 280 WEVTSILGWDEDNNRIYFTAN 300 (353)
T ss_dssp S-EEEEEEEECTSSEEEEEES
T ss_pred eeecccceEcCCCCEEEEEec
Confidence 56644 566666543333333
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0075 Score=68.01 Aligned_cols=136 Identities=16% Similarity=0.104 Sum_probs=92.0
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCc-EEEEEecCCC------CCEEEEEeCCCcEEEEeCCCCCcceec--cc
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE-GFAMDWSSTE------PGVLATGDCKRNIHIWTPREAGAWQVD--QK 313 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~sp~~------~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~ 313 (812)
....|.-.|+..| +.+..+..|... |..+ .|+. +...+.|-.+..+..||++-.+...+. ..
T Consensus 502 ~~~~ly~mDLe~G-------KVV~eW~~~~~~~v~~~--~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k 572 (794)
T PF08553_consen 502 NPNKLYKMDLERG-------KVVEEWKVHDDIPVVDI--APDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSK 572 (794)
T ss_pred CCCceEEEecCCC-------cEEEEeecCCCcceeEe--cccccccccCCCceEEEECCCceEEeccCCCCCceeecccc
Confidence 4567888888876 666777766643 4443 3421 134567777899999999876422111 11
Q ss_pred cccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
.+ ......+|++-+.+|. ||.|+.+|.||+||-- + ....+...+-..+|..|..+.+|+++++.+ +..|.++
T Consensus 573 ~Y-~~~~~Fs~~aTt~~G~--iavgs~~G~IRLyd~~-g---~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi 644 (794)
T PF08553_consen 573 QY-SSKNNFSCFATTEDGY--IAVGSNKGDIRLYDRL-G---KRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLI 644 (794)
T ss_pred cc-ccCCCceEEEecCCce--EEEEeCCCcEEeeccc-c---hhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEE
Confidence 12 2445678888888884 9999999999999943 2 223444467789999999999999666554 4567777
Q ss_pred ec
Q psy4510 394 DL 395 (812)
Q Consensus 394 d~ 395 (812)
+.
T Consensus 645 ~t 646 (794)
T PF08553_consen 645 DT 646 (794)
T ss_pred EE
Confidence 75
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0028 Score=62.88 Aligned_cols=222 Identities=12% Similarity=0.065 Sum_probs=117.5
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
+|+|..||..+++..-.. .+..-.....+. ..+++..+++++.++.+..||..+| +.+..+.. .+.+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~--~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG-------~~~W~~~~-~~~~~~ 70 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSY--DLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTG-------KVLWRFDL-PGPISG 70 (238)
T ss_dssp TSEEEEEETTTTEEEEEE--ECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTS-------EEEEEEEC-SSCGGS
T ss_pred CCEEEEEECCCCCEEEEE--ECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCC-------CEEEEeec-cccccc
Confidence 567777777665521101 111101111111 2346677888889999999999886 44544443 221111
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
... ..+ +.++.+..++.|..+|..++.. |........... ..........+. .++.+..++.|..+|+++++.
T Consensus 71 ~~~-~~~-~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~g~l~~~d~~tG~~-- 144 (238)
T PF13360_consen 71 APV-VDG-GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG-VRSSSSPAVDGD-RLYVGTSSGKLVALDPKTGKL-- 144 (238)
T ss_dssp GEE-EET-TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS-TB--SEEEEETT-EEEEEETCSEEEEEETTTTEE--
T ss_pred eee-ecc-cccccccceeeeEecccCCcceeeeeccccccccc-cccccCceEecC-EEEEEeccCcEEEEecCCCcE--
Confidence 111 123 5677777888999999888874 221111111111 111222222255 477788799999999986543
Q ss_pred ceeecCCcC-C--------CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 357 CMLTLPNAH-T--------SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 357 ~~~~~~~~~-~--------~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
+....... . ..+..-....++ .++.++.+|.+..+|+.+ ++.+.... ...+..+ ..+.+ ..|
T Consensus 145 -~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~t---g~~~w~~~--~~~~~~~-~~~~~-~~l 215 (238)
T PF13360_consen 145 -LWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLAT---GEKLWSKP--ISGIYSL-PSVDG-GTL 215 (238)
T ss_dssp -EEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTT---TEEEEEEC--SS-ECEC-EECCC-TEE
T ss_pred -EEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCC---CCEEEEec--CCCccCC-ceeeC-CEE
Confidence 33321111 1 112222223344 677777777543339874 44443222 2233332 23444 467
Q ss_pred EEEECCCCEEEEEcCCCC
Q psy4510 428 ASGGADDQIALWDLAVER 445 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~~ 445 (812)
+.++.++.|..||+++++
T Consensus 216 ~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 216 YVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp EEEETTTEEEEEETTTTE
T ss_pred EEEeCCCEEEEEECCCCC
Confidence 777789999999999884
|
... |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.017 Score=56.30 Aligned_cols=172 Identities=12% Similarity=0.149 Sum_probs=98.7
Q ss_pred EEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.+.+-...+.+|+|+|+...++++.+..+.|...+.. +.. .....+.+ .+....|++..++. ++++--.++.+.+
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~v--lr~i~l~g-~~D~EgI~y~g~~~-~vl~~Er~~~L~~ 90 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKV--LRRIPLDG-FGDYEGITYLGNGR-YVLSEERDQRLYI 90 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---E--EEEEE-SS--SSEEEEEE-STTE-EEEEETTTTEEEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCE--EEEEeCCC-CCCceeEEEECCCE-EEEEEcCCCcEEE
Confidence 3455567799999999875678888888888888864 331 12233443 45789999987775 3444445899999
Q ss_pred EECCCCCccc---cee----ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE--E------cccCC
Q psy4510 347 WDTRVINTKS---CML----TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA--T------FKHHT 411 (812)
Q Consensus 347 wd~~~~~~~~---~~~----~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--~------~~~h~ 411 (812)
+++....... ... .+...+...+-.++|++.++.|+.+-...-..||.++.......+. . .....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (248)
T PF06977_consen 91 FTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFV 170 (248)
T ss_dssp EEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--S
T ss_pred EEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccccccee
Confidence 9884322111 111 1222355679999999998877777777677777775311111111 1 12234
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
..+.+++++|..+++++.+.....|..+|...
T Consensus 171 ~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G 202 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLILSDESRLLLELDRQG 202 (248)
T ss_dssp S---EEEEETTTTEEEEEETTTTEEEEE-TT-
T ss_pred ccccceEEcCCCCeEEEEECCCCeEEEECCCC
Confidence 56889999998777888888888888888443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0016 Score=67.30 Aligned_cols=145 Identities=14% Similarity=0.106 Sum_probs=98.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe------EEEEEECCCeEEEEECCCCCccccee
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR------VLASCSVDLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~------~l~s~~~dg~i~iwd~~~~~~~~~~~ 359 (812)
-+|.++.....++-.|++.++ ......-+.. |+-+.+.|+.+. --+.|-.|..|.-||.|..... ..
T Consensus 347 lil~~~~~~~~l~klDIE~GK----IVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~--kl 419 (644)
T KOG2395|consen 347 LILMDGGEQDKLYKLDIERGK----IVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN--KL 419 (644)
T ss_pred eEeeCCCCcCcceeeecccce----eeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc--ee
Confidence 456666667778888998887 4445554544 677777776531 1235667889999999954332 11
Q ss_pred ecCCcC----CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 360 TLPNAH----TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 360 ~~~~~~----~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
...+.| ....+|++-..+| ++++|+.+|.|++||-- ..+.-..+++...+|+.|..+.+|..+|+|+ +..
T Consensus 420 ~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri---~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc--~ty 493 (644)
T KOG2395|consen 420 AVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRI---GRRAKTALPGLGDAIKHVDVTADGKWILATC--KTY 493 (644)
T ss_pred eeeeccccccccccceeeecCCc-eEEEeecCCcEEeehhh---hhhhhhcccccCCceeeEEeeccCcEEEEec--ccE
Confidence 111222 3456677666555 89999999999999974 3445566788899999999999986444443 567
Q ss_pred EEEEEcCC
Q psy4510 436 IALWDLAV 443 (812)
Q Consensus 436 v~iwd~~~ 443 (812)
+.+-++.-
T Consensus 494 LlLi~t~~ 501 (644)
T KOG2395|consen 494 LLLIDTLI 501 (644)
T ss_pred EEEEEEec
Confidence 88877654
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.066 Score=54.93 Aligned_cols=91 Identities=8% Similarity=0.034 Sum_probs=43.5
Q ss_pred EEEEEcCCCCeEEEEEECCCeEE--EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIR--IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~--iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
+.=+|.++|+.+|+++..||.-. +.|+.++. +..+..+.........++++++.++-......|+-.|+++.
T Consensus 39 ~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~----i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~-- 112 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDGNRNLYLLDLATGE----ITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTL-- 112 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTSS-EEEEEETTT-E----EEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT---
T ss_pred cCCCcCCCCCEEEEEeccCCCcceEEEEcccCE----EEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcC--
Confidence 34478999998888887777554 45665322 33332222222224566788886655555568888899853
Q ss_pred CCceEEcccCCCCEEEEEEc
Q psy4510 401 GSSVATFKHHTAPVTTVEWH 420 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~ 420 (812)
+....+......+-...|.
T Consensus 113 -e~~~vy~~p~~~~g~gt~v 131 (386)
T PF14583_consen 113 -EERVVYEVPDDWKGYGTWV 131 (386)
T ss_dssp --EEEEEE--TTEEEEEEEE
T ss_pred -cEEEEEECCccccccccee
Confidence 2323333344445445554
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.063 Score=50.65 Aligned_cols=148 Identities=10% Similarity=0.015 Sum_probs=89.1
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce
Q psy4510 279 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358 (812)
Q Consensus 279 ~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 358 (812)
...++.+.+++.|+..+.+.--|..+++... ... ....|.+-+.- -|+ +++.|...|.+++.+..++......
T Consensus 17 VV~~dskT~v~igSHs~~~~avd~~sG~~~W---e~i--lg~RiE~sa~v-vgd-fVV~GCy~g~lYfl~~~tGs~~w~f 89 (354)
T KOG4649|consen 17 VVCNDSKTLVVIGSHSGIVIAVDPQSGNLIW---EAI--LGVRIECSAIV-VGD-FVVLGCYSGGLYFLCVKTGSQIWNF 89 (354)
T ss_pred EEecCCceEEEEecCCceEEEecCCCCcEEe---ehh--hCceeeeeeEE-ECC-EEEEEEccCcEEEEEecchhheeee
Confidence 3445555788888888888888888876311 111 12233333332 244 5889999999999999865433222
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
... ..-.+ .....+++.++..|+.|+..+..|.+ ....+...+-..+-..+-+..|-. ..|..+...|.|.-
T Consensus 90 ~~~---~~vk~-~a~~d~~~glIycgshd~~~yalD~~---~~~cVykskcgG~~f~sP~i~~g~-~sly~a~t~G~vla 161 (354)
T KOG4649|consen 90 VIL---ETVKV-RAQCDFDGGLIYCGSHDGNFYALDPK---TYGCVYKSKCGGGTFVSPVIAPGD-GSLYAAITAGAVLA 161 (354)
T ss_pred eeh---hhhcc-ceEEcCCCceEEEecCCCcEEEeccc---ccceEEecccCCceeccceecCCC-ceEEEEeccceEEE
Confidence 222 11112 22346778899999999999999998 455666665544444445556632 23444444555544
Q ss_pred EEc
Q psy4510 439 WDL 441 (812)
Q Consensus 439 wd~ 441 (812)
-..
T Consensus 162 vt~ 164 (354)
T KOG4649|consen 162 VTK 164 (354)
T ss_pred Ecc
Confidence 433
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.12 Score=55.33 Aligned_cols=201 Identities=11% Similarity=0.050 Sum_probs=102.4
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC-CCCceEEcCCCCcEEEE
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP-TPPLFSFSGHLTEGFAM 278 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~h~~~v~~l 278 (812)
.|+||+...... ....+.. +.|.++.|+.+ ..|+....+|.++++++.... ... ...+....-....+...
T Consensus 62 ~I~iys~sG~ll---~~i~w~~--~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~--~fsl~~~i~~~~v~e~~i~~~ 133 (410)
T PF04841_consen 62 SIQIYSSSGKLL---SSIPWDS--GRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF--QFSLGEEIEEEKVLECRIFAI 133 (410)
T ss_pred EEEEECCCCCEe---EEEEECC--CCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce--eechhhhccccCccccccccc
Confidence 488998766531 1122222 89999999885 556677899999999986421 000 01111111112223333
Q ss_pred EecCCCCCEEEEEeCCCcEEEEe-CCCCCcceec---ccc---ccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 279 DWSSTEPGVLATGDCKRNIHIWT-PREAGAWQVD---QKP---LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 279 ~~sp~~~~~l~sg~~dg~i~vwd-~~~~~~~~~~---~~~---~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
.+...| +++... ++.|.+-. .......... ... ...+.....-..++.+.. +.+....++.+.+.+-..
T Consensus 134 ~~~~~G--ivvLt~-~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~-~~i~~~~g~~i~~i~~~~ 209 (410)
T PF04841_consen 134 WFYKNG--IVVLTG-NNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV-VEILLANGETIYIIDENS 209 (410)
T ss_pred ccCCCC--EEEECC-CCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcc-eEEEEecCCEEEEEEccc
Confidence 333343 333322 34443332 2211100000 000 000111100123444444 355555566666444331
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-CCCEEEEEEccCC
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHPTE 423 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~ 423 (812)
. ..+ ...+++..|+.||+++++|.-..+|.+.+.+.. -.+.+..+... ......+.|.-++
T Consensus 210 ~------~~i--~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssD---f~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 210 F------KQI--DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSD---FSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred c------ccc--cCCCCeEEEEECCCCCEEEEEECCCCEEEEECc---ccceeEEeecCcCCCCcEEEEECCC
Confidence 1 012 224689999999999999999999999998865 23344444433 3455677787653
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.033 Score=58.55 Aligned_cols=93 Identities=16% Similarity=0.228 Sum_probs=59.0
Q ss_pred EEEEcCCCCeEEEEEECCCeEEE---EECCCCC--cccce----eecCCcCCCCeEEEEEcC-----------CCCEEEE
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRI---WDTRVIN--TKSCM----LTLPNAHTSDVNVISWNR-----------TEPLIVS 383 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~i---wd~~~~~--~~~~~----~~~~~~~~~~v~~l~~~~-----------~~~~l~s 383 (812)
.++.+|++. +|+.+..+..+.+ |+..... ..... ..+.......|+++.|-| +...++.
T Consensus 6 ~isls~~~d-~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V 84 (415)
T PF14655_consen 6 SISLSPDGD-LLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV 84 (415)
T ss_pred eEEecCCCC-EEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence 456788888 5777766665554 5442111 11111 111111114677766644 2458999
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
|..+|.|++|.. .+..+..-.-|..+|..|....
T Consensus 85 G~ssG~vrfyte----~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 85 GTSSGYVRFYTE----NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred EecccEEEEEec----cchHHHHHhcCccceEEEEecc
Confidence 999999999998 4677777778999999998754
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.069 Score=57.44 Aligned_cols=229 Identities=11% Similarity=0.042 Sum_probs=121.6
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.+..++.++.+|.++-+|..+++. +-..........+.... +..++.+..++.+..+|..+| +.+..
T Consensus 119 ~~~~v~v~~~~g~l~ald~~tG~~----~W~~~~~~~~~ssP~v~--~~~v~v~~~~g~l~ald~~tG-------~~~W~ 185 (394)
T PRK11138 119 AGGKVYIGSEKGQVYALNAEDGEV----AWQTKVAGEALSRPVVS--DGLVLVHTSNGMLQALNESDG-------AVKWT 185 (394)
T ss_pred ECCEEEEEcCCCEEEEEECCCCCC----cccccCCCceecCCEEE--CCEEEEECCCCEEEEEEccCC-------CEeee
Confidence 345666777789999999988763 22221111111111221 345666778889999999887 33333
Q ss_pred EcCCCCcEE-EEEecC--CCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccC-CC-CCEEEEEEcC--CCCeEEEEEE
Q psy4510 268 FSGHLTEGF-AMDWSS--TEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVG-HT-NSVEDLQWSP--GEKRVLASCS 339 (812)
Q Consensus 268 ~~~h~~~v~-~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~-h~-~~v~~~~~~p--~~~~~l~s~~ 339 (812)
+........ ...-+| .+ +.++.++.+|.+...|..+++. |........+ +. .....+.-+| .+. .++.++
T Consensus 186 ~~~~~~~~~~~~~~sP~v~~-~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~-~vy~~~ 263 (394)
T PRK11138 186 VNLDVPSLTLRGESAPATAF-GGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGG-VVYALA 263 (394)
T ss_pred ecCCCCcccccCCCCCEEEC-CEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECC-EEEEEE
Confidence 322110000 000011 12 4566777889999999888763 2211100000 00 0011111122 234 366677
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC-CCEEEEE
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT-APVTTVE 418 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~v~ 418 (812)
.+|.+..+|+.+++. +....... ...+.. .+..++.++.+|.+..+|.. +++.+.....-. ....+..
T Consensus 264 ~~g~l~ald~~tG~~---~W~~~~~~---~~~~~~--~~~~vy~~~~~g~l~ald~~---tG~~~W~~~~~~~~~~~sp~ 332 (394)
T PRK11138 264 YNGNLVALDLRSGQI---VWKREYGS---VNDFAV--DGGRIYLVDQNDRVYALDTR---GGVELWSQSDLLHRLLTAPV 332 (394)
T ss_pred cCCeEEEEECCCCCE---EEeecCCC---ccCcEE--ECCEEEEEcCCCeEEEEECC---CCcEEEcccccCCCcccCCE
Confidence 889999999986542 32221111 111222 35577778889999999997 344444332111 1122222
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.. + ..|+.++.+|.|.+.|..+++
T Consensus 333 v~--~-g~l~v~~~~G~l~~ld~~tG~ 356 (394)
T PRK11138 333 LY--N-GYLVVGDSEGYLHWINREDGR 356 (394)
T ss_pred EE--C-CEEEEEeCCCEEEEEECCCCC
Confidence 22 2 367888999999999988873
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.013 Score=61.83 Aligned_cols=250 Identities=12% Similarity=0.072 Sum_probs=120.9
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.|+.+.|++ ...-||+|...|.|.||.....+... .+. ..+-..+.+.+- ...++.-.+-|+.....
T Consensus 3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~--~~~----~~~~~~~~~~~~------~~~~~~~~l~di~~r~~ 69 (395)
T PF08596_consen 3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYG--NRE----QPPDLDYNFRRF------SLNNSPGKLTDISDRAP 69 (395)
T ss_dssp -EEEEEEET-TTTEEEEEETTS-EEEEEEEE------------------------S--------GGGSS-SEEE-GGG--
T ss_pred eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCC--ccC----CCcccCcccccc------cccCCCcceEEehhhCC
Confidence 588999999 88999999999999999776543110 000 000000000000 00111222233333211
Q ss_pred CC--CCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee-cccc--c-cCCCCCEEEEEEcC--
Q psy4510 258 PG--IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-DQKP--L-VGHTNSVEDLQWSP-- 329 (812)
Q Consensus 258 ~~--~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~~--~-~~h~~~v~~~~~~p-- 329 (812)
+. ....|..-+....++|++++.|.- +++|.|..+|.+.|.|++...-... .... . ......|+++.|..
T Consensus 70 ~~~~~gf~P~~l~~~~~g~vtal~~S~i--GFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~ 147 (395)
T PF08596_consen 70 PSLKEGFLPLTLLDAKQGPVTALKNSDI--GFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMT 147 (395)
T ss_dssp TT-SEEEEEEEEE---S-SEEEEEE-BT--SEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE
T ss_pred cccccccCchhheeccCCcEeEEecCCC--cEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEe
Confidence 11 013455666667899999999865 6999999999999999976542111 0111 1 11345788888862
Q ss_pred -C--C--CeEEEEEECCCeEEEEECCCCCcc-cc--eeecCCcCCCCeEEEE-EcCC-----------------C---CE
Q psy4510 330 -G--E--KRVLASCSVDLSIRIWDTRVINTK-SC--MLTLPNAHTSDVNVIS-WNRT-----------------E---PL 380 (812)
Q Consensus 330 -~--~--~~~l~s~~~dg~i~iwd~~~~~~~-~~--~~~~~~~~~~~v~~l~-~~~~-----------------~---~~ 380 (812)
. + .-++++|...|.+.+|.+--.... .. .......+.+.|..|. ++.+ + +-
T Consensus 148 ~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g 227 (395)
T PF08596_consen 148 LGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPG 227 (395)
T ss_dssp -TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----E
T ss_pred cCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCc
Confidence 1 1 126888899999999987521111 11 1111123455555544 3211 1 12
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc----CCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP----TESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p----~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++....+..++++.+.+ .+..+......-....+.+-+ .+...|++-..+|.|+++.+...+
T Consensus 228 ~vVvvSe~~irv~~~~~---~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lk 293 (395)
T PF08596_consen 228 YVVVVSESDIRVFKPPK---SKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLK 293 (395)
T ss_dssp EEEEE-SSEEEEE-TT------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--
T ss_pred EEEEEcccceEEEeCCC---CcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCch
Confidence 33334466799999874 223332222212223344431 234678888899999999998775
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.024 Score=55.27 Aligned_cols=212 Identities=12% Similarity=0.129 Sum_probs=114.1
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
.+.+.+-...+..|+|.|+.+.++++....+.|...+.. +..+..++-...+..-.|++..++.++++--.++.+.
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~----G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD----GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT------EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC----CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEE
Confidence 345666666799999999988888888889999888864 2334444334457889999988887777666789999
Q ss_pred EEecCCCCCCCce---EEc-----ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 392 VWDLRRFKKGSSV---ATF-----KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 392 iwd~~~~~~~~~~---~~~-----~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
++++......... ..+ ..+...+-.++|.|.+. .|+.+-...-..++.+......... ...... .+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~-~L~v~kE~~P~~l~~~~~~~~~~~~-~~~~~~----~~ 163 (248)
T PF06977_consen 90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTN-RLFVAKERKPKRLYEVNGFPGGFDL-FVSDDQ----DL 163 (248)
T ss_dssp EEEE----TT--EEEEEEEE---S---SS--EEEEEETTTT-EEEEEEESSSEEEEEEESTT-SS---EEEE-H----HH
T ss_pred EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCC-EEEEEeCCCChhhEEEccccCccce-eecccc----cc
Confidence 9998532111111 111 13456789999999875 4445556666777777652100000 000000 00
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC-------CCCeeEEEEcCCCCCeEEEeeC
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG-------QKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
.........+.+++++|....+++.+..+...+--+........+....+ -.+...+++.++ +.+..++.
T Consensus 164 ~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~--G~LYIvsE 240 (248)
T PF06977_consen 164 DDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPD--GNLYIVSE 240 (248)
T ss_dssp H-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT----EEEEET
T ss_pred ccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCC--CCEEEEcC
Confidence 00011123588999999987777777777766555555554444443332 136778999998 45544443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.2 Score=53.74 Aligned_cols=178 Identities=8% Similarity=0.032 Sum_probs=90.9
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee--ccccccCCCCCEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV--DQKPLVGHTNSVE 323 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~~~~~h~~~v~ 323 (812)
.|+||+... +++.++.-..+.+.++.|+.+. .|+.-..||.++++|+........ ......-....+.
T Consensus 62 ~I~iys~sG--------~ll~~i~w~~~~iv~~~wt~~e--~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~ 131 (410)
T PF04841_consen 62 SIQIYSSSG--------KLLSSIPWDSGRIVGMGWTDDE--ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIF 131 (410)
T ss_pred EEEEECCCC--------CEeEEEEECCCCEEEEEECCCC--eEEEEEcCCEEEEEeCCCceeechhhhccccCccccccc
Confidence 477777655 4555544444889999999864 566677899999999863320000 0000011111222
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCC-cccceeecCC------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKSCMLTLPN------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
...+..+| +++. ..++.+.+..--... ........+. .+........++.+....+....++.+.+.+-.
T Consensus 132 ~~~~~~~G--ivvL-t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~ 208 (410)
T PF04841_consen 132 AIWFYKNG--IVVL-TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDEN 208 (410)
T ss_pred ccccCCCC--EEEE-CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcc
Confidence 22333344 2332 334444433221110 0000001100 011111112344455555555555666655543
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.. .. +. ..+++..|+.||++ +++|.-..+|.+.+......
T Consensus 209 ~~---~~---i~-~~~~i~~iavSpng-~~iAl~t~~g~l~v~ssDf~ 248 (410)
T PF04841_consen 209 SF---KQ---ID-SDGPIIKIAVSPNG-KFIALFTDSGNLWVVSSDFS 248 (410)
T ss_pred cc---cc---cc-CCCCeEEEEECCCC-CEEEEEECCCCEEEEECccc
Confidence 21 11 22 24689999999997 58888888999988876544
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.026 Score=55.90 Aligned_cols=179 Identities=11% Similarity=0.042 Sum_probs=97.3
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCC--CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
++.|..+|..++ +.+....-- .....+... +.+ +.+++++.++.|..||..+++. .-.+.. ...
T Consensus 2 ~g~l~~~d~~tG-------~~~W~~~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~l~~~d~~tG~~----~W~~~~-~~~ 67 (238)
T PF13360_consen 2 DGTLSALDPRTG-------KELWSYDLGPGIGGPVATAV-PDG-GRVYVASGDGNLYALDAKTGKV----LWRFDL-PGP 67 (238)
T ss_dssp TSEEEEEETTTT-------EEEEEEECSSSCSSEEETEE-EET-TEEEEEETTSEEEEEETTTSEE----EEEEEC-SSC
T ss_pred CCEEEEEECCCC-------CEEEEEECCCCCCCccceEE-EeC-CEEEEEcCCCEEEEEECCCCCE----EEEeec-ccc
Confidence 567778887765 444444321 122222122 233 6777778899999999988863 111111 111
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
+...... .+. .++.++.++.|+.+|..+++...........-............+..++.+..++.|..+|++ ++
T Consensus 68 ~~~~~~~-~~~-~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~---tG 142 (238)
T PF13360_consen 68 ISGAPVV-DGG-RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPK---TG 142 (238)
T ss_dssp GGSGEEE-ETT-EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETT---TT
T ss_pred ccceeee-ccc-ccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecC---CC
Confidence 1111122 233 366666888999999886654333211100000111222222237788888889999999998 57
Q ss_pred CceEEcccCCCC----------E-EEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATFKHHTAP----------V-TTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~~h~~~----------v-~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+......... + ..+.+. ++ .+..++.++.+..+|+.++
T Consensus 143 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~v~~~~~~g~~~~~d~~tg 193 (238)
T PF13360_consen 143 KLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG--RVYVSSGDGRVVAVDLATG 193 (238)
T ss_dssp EEEEEEESSTT-SS--EEEETTEEEEEECC-TT--EEEEECCTSSEEEEETTTT
T ss_pred cEEEEeecCCCCCCcceeeecccccceEEE-CC--EEEEEcCCCeEEEEECCCC
Confidence 777766554322 1 222222 33 5666666776444498887
|
... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.049 Score=59.39 Aligned_cols=133 Identities=15% Similarity=0.066 Sum_probs=81.3
Q ss_pred EeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe-EE
Q psy4510 595 TCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV-LA 673 (812)
Q Consensus 595 ~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~-la 673 (812)
+.++|++...+ +++|.+.|..+.... ....+..+ .-......+++|| |+++ ++
T Consensus 284 ~vkdGK~~~V~----gn~V~VID~~t~~~~--------------------~~~v~~yI-PVGKsPHGV~vSP-DGkylyV 337 (635)
T PRK02888 284 AVKAGKFKTIG----GSKVPVVDGRKAANA--------------------GSALTRYV-PVPKNPHGVNTSP-DGKYFIA 337 (635)
T ss_pred hhhCCCEEEEC----CCEEEEEECCccccC--------------------CcceEEEE-ECCCCccceEECC-CCCEEEE
Confidence 44577766653 568999998871000 00012222 2334678899999 5655 55
Q ss_pred ecCCCceEEEEecCCCce------------e---------EEEEecCCCCEEEeecCCCeEEEeecCCC------CCccc
Q psy4510 674 TGDCKRNIHIWTPREAGA------------W---------SVYLYTNRFGVLATGDCKRNIHIWTPREA------GAWQV 726 (812)
Q Consensus 674 s~s~Dg~v~iWd~~~~~~------------~---------~~~~~s~dg~~lasgs~dg~i~iwd~~~~------~~~~~ 726 (812)
++..+.+|.|.|+.+.+. . --..|.++|....+-.-|..|..|++.+. +....
T Consensus 338 anklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~ 417 (635)
T PRK02888 338 NGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDP 417 (635)
T ss_pred eCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCc
Confidence 566699999999988331 1 12357899988888888999999998762 11111
Q ss_pred cccc-----ccCCCcceeEeEEecCCceeEEee
Q psy4510 727 DQKP-----LVGHTNSVEDLQWSPGEKRVLASC 754 (812)
Q Consensus 727 ~~~~-----~~gH~~~V~~l~fs~dg~~~L~s~ 754 (812)
.+.. -.||......=.-.|||+ ||++.
T Consensus 418 v~~k~dV~y~pgh~~~~~g~t~~~dgk-~l~~~ 449 (635)
T PRK02888 418 IVQKLDVHYQPGHNHASMGETKEADGK-WLVSL 449 (635)
T ss_pred ceecccCCCccceeeecCCCcCCCCCC-EEEEc
Confidence 2222 245544333334468888 67775
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.16 Score=55.21 Aligned_cols=204 Identities=13% Similarity=0.046 Sum_probs=108.1
Q ss_pred CeeeeeEcCCCCcEEEe-eCCC----ceEEeeCCCCCCCCCCCCCce-EEcCCCCcEEEEEecCCCCCEEEEEeCC----
Q psy4510 225 SAEDLQWSDLKTALQTV-DDPF----QLAEHNKKRGKGPGIPTPPLF-SFSGHLTEGFAMDWSSTEPGVLATGDCK---- 294 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~-~~d~----~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~l~sg~~d---- 294 (812)
.+...++||++++||.+ +..| .+++.|+.++ +.+. .+.. .....+.|.+++..++.+...+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg-------~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~ 195 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG-------KFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRT 195 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTT-------EEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCC-------cCcCCcccc--cccceEEEeCCCCEEEEEEeCccccc
Confidence 34467899999988855 4444 4999999885 2222 1121 1122499999985556665333
Q ss_pred ------CcEEEEeCCCCCcceeccccccCCCC--CEEEEEEcCCCCeEEEEEECCCe---EEEEECCCCC-cccceeecC
Q psy4510 295 ------RNIHIWTPREAGAWQVDQKPLVGHTN--SVEDLQWSPGEKRVLASCSVDLS---IRIWDTRVIN-TKSCMLTLP 362 (812)
Q Consensus 295 ------g~i~vwd~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~l~s~~~dg~---i~iwd~~~~~-~~~~~~~~~ 362 (812)
..|+.|.+.+...... ..+..... ....+..+++++.+++....... +.+.++.... .......+.
T Consensus 196 ~~~~~~~~v~~~~~gt~~~~d~--lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~ 273 (414)
T PF02897_consen 196 SDSGYPRQVYRHKLGTPQSEDE--LVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLS 273 (414)
T ss_dssp -CCGCCEEEEEEETTS-GGG-E--EEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEE
T ss_pred ccCCCCcEEEEEECCCChHhCe--eEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEe
Confidence 2378888877653211 22322222 26788999999987776665444 7777777530 011222221
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceEEcccCCCC--EEEEEEccCCCcEEEEEECCC--C
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGG---DDGCIHVWDLRRFKKGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADD--Q 435 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg--~ 435 (812)
....+....+... .+.+++... ..+.|...++...........+..+... +..+.. .+..+++..-.++ .
T Consensus 274 ~~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~ 350 (414)
T PF02897_consen 274 PREDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSR 350 (414)
T ss_dssp ESSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEE
T ss_pred CCCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccE
Confidence 2223333334433 344443332 2466777777753221123345555553 444444 3445666655555 5
Q ss_pred EEEEEcC
Q psy4510 436 IALWDLA 442 (812)
Q Consensus 436 v~iwd~~ 442 (812)
|+++++.
T Consensus 351 l~v~~~~ 357 (414)
T PF02897_consen 351 LRVYDLD 357 (414)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 7888887
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.026 Score=60.36 Aligned_cols=219 Identities=12% Similarity=0.144 Sum_probs=112.0
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe-eCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH-NKKRGK 256 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw-d~~~~~ 256 (812)
....+.++| +|+.+++++ +|.-.|+...... ....+.-...+|.+.++ +|+....+.|.|+ +++.
T Consensus 34 ~p~~ls~np-ngr~v~V~g-~geY~iyt~~~~r---------~k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~-- 99 (443)
T PF04053_consen 34 YPQSLSHNP-NGRFVLVCG-DGEYEIYTALAWR---------NKAFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKN-- 99 (443)
T ss_dssp --SEEEE-T-TSSEEEEEE-TTEEEEEETTTTE---------EEEEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE--
T ss_pred CCeeEEECC-CCCEEEEEc-CCEEEEEEccCCc---------ccccCceeEEEEecCcc-EEEEECCCeEEEEEcCcc--
Confidence 467899999 999999966 6788888522111 12234556788988554 6777778889995 4433
Q ss_pred CCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 257 GPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 257 ~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
.....+.. ....++. | .+|+..+. +.|.+||+.++. ..+.+.- .+|..+.|++++. +
T Consensus 100 ------~~~k~i~~~~~~~~If~------G-~LL~~~~~-~~i~~yDw~~~~----~i~~i~v--~~vk~V~Ws~~g~-~ 158 (443)
T PF04053_consen 100 ------EVVKSIKLPFSVEKIFG------G-NLLGVKSS-DFICFYDWETGK----LIRRIDV--SAVKYVIWSDDGE-L 158 (443)
T ss_dssp -------TT-----SS-EEEEE-------S-SSEEEEET-TEEEEE-TTT------EEEEESS---E-EEEEE-TTSS-E
T ss_pred ------ccceEEcCCcccceEEc------C-cEEEEECC-CCEEEEEhhHcc----eeeEEec--CCCcEEEEECCCC-E
Confidence 22122221 1223333 5 56666654 489999999887 3444432 2489999999998 4
Q ss_pred EEEEECCCeEEEEECCCC------Ccc--cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 335 LASCSVDLSIRIWDTRVI------NTK--SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~------~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
++..+. ..+.|++.... ..+ ..+..+ ..-...|.+.+|..+ .|+-.+.. .|+. +. +.....
T Consensus 159 val~t~-~~i~il~~~~~~~~~~~~~g~e~~f~~~-~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~----~Ge~~~ 227 (443)
T PF04053_consen 159 VALVTK-DSIYILKYNLEAVAAIPEEGVEDAFELI-HEISERIKSGCWVED--CFIYTTSN-HLKY--LV----NGETGI 227 (443)
T ss_dssp EEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEE-EEE-S--SEEEEETT--EEEEE-TT-EEEE--EE----TTEEEE
T ss_pred EEEEeC-CeEEEEEecchhcccccccCchhceEEE-EEecceeEEEEEEcC--EEEEEcCC-eEEE--EE----cCCcce
Confidence 665554 46777775421 000 012222 222567888899865 44443433 6666 32 223333
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+..-..++.=+...|.. ..+.....|+.|..+.+..
T Consensus 228 i~~ld~~~yllgy~~~~-~~ly~~Dr~~~v~~~~ld~ 263 (443)
T PF04053_consen 228 IAHLDKPLYLLGYLPKE-NRLYLIDRDGNVISYELDL 263 (443)
T ss_dssp EEE-SS--EEEEEETTT-TEEEEE-TT--EEEEE--H
T ss_pred EEEcCCceEEEEEEccC-CEEEEEECCCCEEEEEECH
Confidence 44335567777777754 5788888888888887754
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.076 Score=56.90 Aligned_cols=188 Identities=14% Similarity=0.137 Sum_probs=97.3
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..+.+.........+.++|.|+.++. +.+|.-.|+..... +. . ..+.....+|.+. +.+|+-...
T Consensus 24 ~~k~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~-------r~--k---~~G~g~~~vw~~~--n~yAv~~~~ 88 (443)
T PF04053_consen 24 SVKELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAW-------RN--K---AFGSGLSFVWSSR--NRYAVLESS 88 (443)
T ss_dssp --EEEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTT-------EE--E---EEEE-SEEEE-TS--SEEEEE-TT
T ss_pred EeccCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCC-------cc--c---ccCceeEEEEecC--ccEEEEECC
Confidence 44555566667889999999998888 55677777763221 11 1 1245567899994 578888778
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
++|.|+.--+.. ....+.- ...+..|-. |. +|+..+. +.|.+||+.+ ...+..+ . -.+|..+.|
T Consensus 89 ~~I~I~kn~~~~----~~k~i~~-~~~~~~If~---G~-LL~~~~~-~~i~~yDw~~---~~~i~~i-~--v~~vk~V~W 152 (443)
T PF04053_consen 89 STIKIYKNFKNE----VVKSIKL-PFSVEKIFG---GN-LLGVKSS-DFICFYDWET---GKLIRRI-D--VSAVKYVIW 152 (443)
T ss_dssp S-EEEEETTEE-----TT------SS-EEEEE----SS-SEEEEET-TEEEEE-TTT-----EEEEE-S--S-E-EEEEE
T ss_pred CeEEEEEcCccc----cceEEcC-CcccceEEc---Cc-EEEEECC-CCEEEEEhhH---cceeeEE-e--cCCCcEEEE
Confidence 999997322222 1112211 123444433 66 5655554 4899999984 4455555 2 224899999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCC------CCC--CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRF------KKG--SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~------~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
++++.+++..+.+ .+.|++.... ..+ ..+..+..-...|.+..|..+ -++.+.. . +++.
T Consensus 153 s~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~-~-~lkY 219 (443)
T PF04053_consen 153 SDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTS-N-HLKY 219 (443)
T ss_dssp -TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-T-T-EEEE
T ss_pred ECCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcC-C-eEEE
Confidence 9999998888765 6888776421 000 133343333567888888854 3444433 3 5665
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.53 Score=50.63 Aligned_cols=229 Identities=10% Similarity=0.016 Sum_probs=117.6
Q ss_pred CCeEEEecCCCcEEEEccCCCCcc-cccccc----cCCC-CCCee-eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAW-QVDQKP----LGGH-TNSAE-DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~----l~~h-~~~V~-~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+..+++++.+|.|.-+|..+++.. ...... +... ...+. .++. .+..++.++.++.+..+|.++|+
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~----- 141 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGE----- 141 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCC-----
Confidence 456666666777777777766531 111100 0000 00111 1111 34567778888999999998873
Q ss_pred CCCceEEcCCCCcEEE-EEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceecccc----ccCCCCCEEEEEEcCCCCeEE
Q psy4510 262 TPPLFSFSGHLTEGFA-MDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKP----LVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~-l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~----~~~h~~~v~~~~~~p~~~~~l 335 (812)
.+.+..... .+.+ .... + ..++.+..++.|..+|..+++. |...... ..+...++. . +. .+
T Consensus 142 --~~W~~~~~~-~~~ssP~v~--~-~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v----~--~~-~v 208 (394)
T PRK11138 142 --VAWQTKVAG-EALSRPVVS--D-GLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT----A--FG-GA 208 (394)
T ss_pred --CcccccCCC-ceecCCEEE--C-CEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE----E--CC-EE
Confidence 333332211 1211 1111 2 5677788889999999988874 2221110 001111211 1 22 35
Q ss_pred EEEECCCeEEEEECCCCCcccceeecC-C-cCC-CCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLP-N-AHT-SDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~-~-~~~-~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
+.++.+|.+...|..++.......... . .+. .....+..+| .+..++.++.+|.+..+|+. +++.+.....
T Consensus 209 ~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~---tG~~~W~~~~- 284 (394)
T PRK11138 209 IVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLR---SGQIVWKREY- 284 (394)
T ss_pred EEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECC---CCCEEEeecC-
Confidence 667778999988887654322111000 0 000 0011111122 24467777789999999997 4555544331
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.....+... + ..++.++.+|.+..+|..+++
T Consensus 285 -~~~~~~~~~--~-~~vy~~~~~g~l~ald~~tG~ 315 (394)
T PRK11138 285 -GSVNDFAVD--G-GRIYLVDQNDRVYALDTRGGV 315 (394)
T ss_pred -CCccCcEEE--C-CEEEEEcCCCeEEEEECCCCc
Confidence 111122222 3 367777789999999998774
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.86 Score=51.73 Aligned_cols=161 Identities=12% Similarity=-0.029 Sum_probs=84.9
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCC--CCC---EEEEEeCCCc
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSST--EPG---VLATGDCKRN 296 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~--~~~---~l~sg~~dg~ 296 (812)
+.++..+.+.+..+++.++.++.+...++..+ . +... +.-..+|.|++++|. +++ +++.|..+..
T Consensus 488 ~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~-------~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~ 559 (1096)
T KOG1897|consen 488 GKITIGVVSANASQVVVAGGGLALFYLEIEDG-------G-LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDI 559 (1096)
T ss_pred CceEEEEEeecceEEEEecCccEEEEEEeecc-------c-eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecce
Confidence 44555555555567777777676666666553 1 2111 122468999999986 444 7899988777
Q ss_pred EEEEeCCCCCcce-eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC--CCcccceeecCCcCCCCeEEEE
Q psy4510 297 IHIWTPREAGAWQ-VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV--INTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 297 i~vwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
+.+--........ ........-...|.-.++--+.. +|.++..||.+.-+-+.. +.... .+.. .-...++.--.
T Consensus 560 ~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~-yLlvalgdG~l~~fv~d~~tg~lsd-~Kk~-~lGt~P~~Lr~ 636 (1096)
T KOG1897|consen 560 SMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIH-YLLVALGDGALLYFVLDINTGQLSD-RKKV-TLGTQPISLRT 636 (1096)
T ss_pred EEEEEECCCcceeeeeccCCCccchheeeEEeeccce-EEEEEcCCceEEEEEEEcccceEcc-cccc-ccCCCCcEEEE
Confidence 6655433222100 00111111223455555555544 688999999997765542 21111 1111 12234555556
Q ss_pred EcCCCC-EEEEEeCCCcEEEEecC
Q psy4510 374 WNRTEP-LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 374 ~~~~~~-~l~sg~~dg~i~iwd~~ 396 (812)
|+..++ .++++ .|.-..+|.-+
T Consensus 637 f~sk~~t~vfa~-sdrP~viY~~n 659 (1096)
T KOG1897|consen 637 FSSKSRTAVFAL-SDRPTVIYSSN 659 (1096)
T ss_pred EeeCCceEEEEe-CCCCEEEEecC
Confidence 666555 34433 45555566553
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00062 Score=44.43 Aligned_cols=36 Identities=39% Similarity=0.483 Sum_probs=32.1
Q ss_pred cccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 728 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 728 ~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
...+.+|...|.+++|.+.+. ++++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGK-YLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCC-EEEEecCCCeEEEcC
Confidence 445678889999999999998 899999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.13 Score=52.25 Aligned_cols=228 Identities=11% Similarity=0.037 Sum_probs=125.3
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPT 262 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 262 (812)
.|.|..+.++.+--..+.|+-|+..++.. ....+...+.++..-..+..|+++.. .+.+++.+.+. ..
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~------~~~~~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~----~~ 98 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGKK------RVFPSPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGG----KI 98 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCce------EEEECCCCcccceeecCCCeEEEEcc--ccEEEeccCCc----ee
Confidence 46663334666767778899998876542 11122333455555455555665543 34455554431 00
Q ss_pred CCceEE-cCCC-CcEEEEEecCCCCCEEEEEeCC----------CcEEEEeCC-CCCcceeccccccCCCCCEEEEEEcC
Q psy4510 263 PPLFSF-SGHL-TEGFAMDWSSTEPGVLATGDCK----------RNIHIWTPR-EAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 263 ~~~~~~-~~h~-~~v~~l~~sp~~~~~l~sg~~d----------g~i~vwd~~-~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
..+... .+.. ...+.+...|+| .+.++ +.. ..-.||.+. .+. ..+.+..+-..-+.|+|||
T Consensus 99 t~~~~~~~~~~~~r~ND~~v~pdG-~~wfg-t~~~~~~~~~~~~~~G~lyr~~p~g~----~~~l~~~~~~~~NGla~Sp 172 (307)
T COG3386 99 TLLAEPEDGLPLNRPNDGVVDPDG-RIWFG-DMGYFDLGKSEERPTGSLYRVDPDGG----VVRLLDDDLTIPNGLAFSP 172 (307)
T ss_pred EEeccccCCCCcCCCCceeEcCCC-CEEEe-CCCccccCccccCCcceEEEEcCCCC----EEEeecCcEEecCceEECC
Confidence 111111 1111 234567777886 33332 222 111344444 233 2334444455668999999
Q ss_pred CCCeEEEEEECCCeEEEEECCC--CCccc-ceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCCCCceE
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRV--INTKS-CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~--~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~ 405 (812)
+++.++++=+..+.|.-|++.. ..... ..........+..-.++...+|.+.+++...| .|.+|+.. ++.+.
T Consensus 173 Dg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd----G~l~~ 248 (307)
T COG3386 173 DGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD----GKLLG 248 (307)
T ss_pred CCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC----CcEEE
Confidence 9997777767778888887752 11111 11112123445566677788888665554444 89999984 67777
Q ss_pred EcccCCCCEEEEEEcc-CCCcEEEEEEC
Q psy4510 406 TFKHHTAPVTTVEWHP-TESSTFASGGA 432 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p-~~~~~l~s~~~ 432 (812)
.+.-....+++++|-- +...+++++..
T Consensus 249 ~i~lP~~~~t~~~FgG~~~~~L~iTs~~ 276 (307)
T COG3386 249 EIKLPVKRPTNPAFGGPDLNTLYITSAR 276 (307)
T ss_pred EEECCCCCCccceEeCCCcCEEEEEecC
Confidence 7777767788888864 33344444443
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0038 Score=66.04 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=73.0
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE-EEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE-DLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
...+.-+.|+|.- .++|.+..+|.|.+..+.-.+ ...+.-|...++ +++|.|+|+ +||.|-.||+|++.|+.
T Consensus 20 ~~~i~~~ewnP~~-dLiA~~t~~gelli~R~n~qR-----lwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dve 92 (665)
T KOG4640|consen 20 PINIKRIEWNPKM-DLIATRTEKGELLIHRLNWQR-----LWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDVE 92 (665)
T ss_pred ccceEEEEEcCcc-chhheeccCCcEEEEEeccce-----eEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEcc
Confidence 3568899999988 799999999999998887443 333443555555 999999998 89999999999999998
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
++ ..+......-..+|.++-|.+
T Consensus 93 ~~---~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 93 KG---GRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred CC---Cceeccccccccchheeeccc
Confidence 53 334443344567788888874
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.095 Score=52.73 Aligned_cols=136 Identities=13% Similarity=0.171 Sum_probs=76.9
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE----------CCCeEEEEECCCCCcccceeecCCc
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS----------VDLSIRIWDTRVINTKSCMLTLPNA 364 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 364 (812)
+.+.|.|..+++. +..+. .+..-.+..+|+++. +++++ ..-.|.+||..+......+ .++..
T Consensus 17 ~rv~viD~d~~k~----lGmi~--~g~~~~~~~spdgk~-~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI-~iP~k 88 (342)
T PF06433_consen 17 SRVYVIDADSGKL----LGMID--TGFLGNVALSPDGKT-IYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEI-EIPPK 88 (342)
T ss_dssp EEEEEEETTTTEE----EEEEE--EESSEEEEE-TTSSE-EEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEE-EETTS
T ss_pred ceEEEEECCCCcE----EEEee--cccCCceeECCCCCE-EEEEEEEEeccccccceeEEEEEecCcCcccceE-ecCCc
Confidence 4688888877652 21111 122334667999995 44432 2447999999865433322 22222
Q ss_pred CC----CCeEEEEEcCCCCEEEEE--eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 365 HT----SDVNVISWNRTEPLIVSG--GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 365 ~~----~~v~~l~~~~~~~~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
|. ...+.++++.++++++.. +--..|.|.|+. .++.+..+.. .+ |...-|.++.-|.+-+.||.+.-
T Consensus 89 ~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~---~~kvv~ei~~-PG---C~~iyP~~~~~F~~lC~DGsl~~ 161 (342)
T PF06433_consen 89 PRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLA---AKKVVGEIDT-PG---CWLIYPSGNRGFSMLCGDGSLLT 161 (342)
T ss_dssp -B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETT---TTEEEEEEEG-TS---EEEEEEEETTEEEEEETTSCEEE
T ss_pred chheecccccceEEccCCcEEEEEccCCCCeEEEEECC---CCceeeeecC-CC---EEEEEecCCCceEEEecCCceEE
Confidence 11 223446778888855554 345678888886 3444444432 22 22223545556888899999999
Q ss_pred EEcCCCC
Q psy4510 439 WDLAVER 445 (812)
Q Consensus 439 wd~~~~~ 445 (812)
..+....
T Consensus 162 v~Ld~~G 168 (342)
T PF06433_consen 162 VTLDADG 168 (342)
T ss_dssp EEETSTS
T ss_pred EEECCCC
Confidence 9998553
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.05 Score=44.78 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=67.9
Q ss_pred EEEEEec---CCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 275 GFAMDWS---STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 275 v~~l~~s---p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
|.+|++. .+|...|++|+.|..|++|+-..- ...+. -.+.|..++-...+ .|+.+..+|+|-+|+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e~------~~Ei~-e~~~v~~L~~~~~~--~F~Y~l~NGTVGvY~~~- 71 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDEI------VAEIT-ETDKVTSLCSLGGG--RFAYALANGTVGVYDRS- 71 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCcE------EEEEe-cccceEEEEEcCCC--EEEEEecCCEEEEEeCc-
Confidence 4555554 456678999999999999985532 23333 34578888877765 49999999999999853
Q ss_pred CCcccceeecCCcCCCCeEEEEEcC---CCC-EEEEEeCCCcEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNR---TEP-LIVSGGDDGCIH 391 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~---~~~-~l~sg~~dg~i~ 391 (812)
..+..... ...++++.+.. +|. -|++|-.+|.|-
T Consensus 72 ----~RlWRiKS--K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 72 ----QRLWRIKS--KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ----ceeeeecc--CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 22344422 23356655543 332 789999898774
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.14 Score=57.32 Aligned_cols=191 Identities=14% Similarity=0.117 Sum_probs=103.2
Q ss_pred CCCCCeeeeeEcCCCCcEEEee------CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVD------DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC- 293 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~- 293 (812)
+....+...++||+|+.++... .+..-.+|-...+. .......+. ....-.|+|+| ..|.+...
T Consensus 347 g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg------~~~~lt~g~--~~t~PsWspDG-~~lw~v~dg 417 (591)
T PRK13616 347 GQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG------VAVQVLEGH--SLTRPSWSLDA-DAVWVVVDG 417 (591)
T ss_pred ccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC------cceeeecCC--CCCCceECCCC-CceEEEecC
Confidence 3445788999999999887665 24444444433221 122222332 37788999997 44444432
Q ss_pred -----------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc-ce---
Q psy4510 294 -----------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS-CM--- 358 (812)
Q Consensus 294 -----------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~--- 358 (812)
.+.+.+.++..+. ... ...+.|..+.|+|+|.++.+.. +|.|.+=-+....... .+
T Consensus 418 ~~~~~v~~~~~~gql~~~~vd~ge----~~~---~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 418 NTVVRVIRDPATGQLARTPVDASA----VAS---RVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred cceEEEeccCCCceEEEEeccCch----hhh---ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCceeeccc
Confidence 1233333443332 111 3356799999999999755554 4777663222111111 11
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
..+...-...+..+.|..++.++ ++..++...+|.+.- .+.....+.. ...++.+|+-++. -++....++.
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~v--DG~~~~~~~~~n~~~~v~~vaa~~~---~iyv~~~~g~ 561 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNL--DGSNSDALPSRNLSAPVVAVAASPS---TVYVTDARAV 561 (591)
T ss_pred EEeecccCCccccceEecCCEEE-EEecCCCCceEEEec--CCccccccCCCCccCceEEEecCCc---eEEEEcCCce
Confidence 12212233346889999998854 555555555665543 2222222222 3667888887763 3455555663
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.29 Score=49.34 Aligned_cols=246 Identities=11% Similarity=0.068 Sum_probs=136.2
Q ss_pred EEeCCCCCCeEEEe----------cCCCcEEEEccCCCCcccccccccC---CCCCCeeeeeEcCCCCcEEEee--CCCc
Q psy4510 182 MDWSSTEPGVLATG----------DCKRNIHIWTPREAGAWQVDQKPLG---GHTNSAEDLQWSDLKTALQTVD--DPFQ 246 (812)
Q Consensus 182 ~~~sp~~~~~lat~----------~~dg~v~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~l~s~~--~d~~ 246 (812)
+..|| +++.++++ -..-.|.+||..+-.........-+ ........+++|.+++++.... -...
T Consensus 41 ~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S 119 (342)
T PF06433_consen 41 VALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS 119 (342)
T ss_dssp EEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred eeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence 56789 99988875 2334589999988643211111111 1112345678889999887654 4566
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCC-CEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTN-SVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~-~v~~ 324 (812)
|.|-|+..+ +-+..+.- +. |.-.-|.++..+.+-+.||.+.-..+...++..... ..|..-.. .+..
T Consensus 120 VtVVDl~~~-------kvv~ei~~---PG-C~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~ 188 (342)
T PF06433_consen 120 VTVVDLAAK-------KVVGEIDT---PG-CWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEH 188 (342)
T ss_dssp EEEEETTTT-------EEEEEEEG---TS-EEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S-
T ss_pred EEEEECCCC-------ceeeeecC---CC-EEEEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccc
Confidence 888888774 33333321 11 222235554678888889999999998665422111 12222222 2234
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC---------CcCCCCeEEEEEcCCCCEEEEE---eCCC----
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP---------NAHTSDVNVISWNRTEPLIVSG---GDDG---- 388 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~~~~~l~sg---~~dg---- 388 (812)
-++...+.. ++--+..|.|+--|+..... ....... .-..+.-.-+++++..+.|++- +.+|
T Consensus 189 ~~~~~~~~~-~~F~Sy~G~v~~~dlsg~~~-~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKd 266 (342)
T PF06433_consen 189 PAYSRDGGR-LYFVSYEGNVYSADLSGDSA-KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKD 266 (342)
T ss_dssp -EEETTTTE-EEEEBTTSEEEEEEETTSSE-EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS
T ss_pred cceECCCCe-EEEEecCCEEEEEeccCCcc-cccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccC
Confidence 445544443 44467889888888864321 1111110 0112345567888766644432 1122
Q ss_pred ---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE-ECCCCEEEEEcCCCC
Q psy4510 389 ---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG-GADDQIALWDLAVER 445 (812)
Q Consensus 389 ---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-~~dg~v~iwd~~~~~ 445 (812)
.|.++|+. +++.+.++.. ..++.+|+.+.+..-+|++. ..++.|.+||..+++
T Consensus 267 pgteVWv~D~~---t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 267 PGTEVWVYDLK---THKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGK 323 (342)
T ss_dssp -EEEEEEEETT---TTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--
T ss_pred CceEEEEEECC---CCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCc
Confidence 37777876 4666777663 34678999998875566554 457899999999885
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.002 Score=41.81 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=32.3
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+...+.+|...|.++.|++ .+.++++++.|+.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSP-DGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence 4566778999999999999 668999999999999986
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.58 Score=48.22 Aligned_cols=271 Identities=16% Similarity=0.142 Sum_probs=117.8
Q ss_pred EeCCCCCCeE-EEecCCCcEEEE--ccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 183 DWSSTEPGVL-ATGDCKRNIHIW--TPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 183 ~~sp~~~~~l-at~~~dg~v~iw--d~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
+|.+ +|+.| .++..||.-.+| |+.+++ ..+|..+. .......++++++.++-......++.-|+.+.
T Consensus 42 ~ft~-dG~kllF~s~~dg~~nly~lDL~t~~-----i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~--- 112 (386)
T PF14583_consen 42 CFTD-DGRKLLFASDFDGNRNLYLLDLATGE-----ITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTL--- 112 (386)
T ss_dssp -B-T-TS-EEEEEE-TTSS-EEEEEETTT-E-----EEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT----
T ss_pred CcCC-CCCEEEEEeccCCCcceEEEEcccCE-----EEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcC---
Confidence 4677 78655 455556655555 666654 23333322 23335667788888876666678888888885
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC----C-------------------CcEEEEeCCCCCcceeccccc
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC----K-------------------RNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~----d-------------------g~i~vwd~~~~~~~~~~~~~~ 315 (812)
+.+.++.+ ....+-...|..+....++.|.. | ..|.--|+.+++ ...+
T Consensus 113 --e~~~vy~~--p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~-----~~~v 183 (386)
T PF14583_consen 113 --EERVVYEV--PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE-----RKVV 183 (386)
T ss_dssp ---EEEEEE----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT-------EEEE
T ss_pred --cEEEEEEC--CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc-----eeEE
Confidence 22333333 34444445664332233333321 1 123333444443 2233
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEEC---CC-eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE-Ee----C
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSV---DL-SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS-GG----D 386 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~---dg-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~----~ 386 (812)
..-...+..+.|+|..+.+|+-|-. +. .-|||-+++.........- ......+.-=-|.|+|..|.- +. .
T Consensus 184 ~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~-~~~~e~~gHEfw~~DG~~i~y~~~~~~~~ 262 (386)
T PF14583_consen 184 FEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHR-RMEGESVGHEFWVPDGSTIWYDSYTPGGQ 262 (386)
T ss_dssp EEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS-EEEEEEETTT-
T ss_pred EecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeec-CCCCcccccccccCCCCEEEEEeecCCCC
Confidence 3345678899999999987777654 22 2377877653332222111 111223444568899983332 22 2
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC----------------CEEEEEcCCCCchhHH
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD----------------QIALWDLAVERDSEIE 450 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg----------------~v~iwd~~~~~~~~~~ 450 (812)
+..|.-+|+.+ ........ ......+.-++++ .+++-=|.|. .|.++++.....
T Consensus 263 ~~~i~~~d~~t---~~~~~~~~--~p~~~H~~ss~Dg-~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~---- 332 (386)
T PF14583_consen 263 DFWIAGYDPDT---GERRRLME--MPWCSHFMSSPDG-KLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRF---- 332 (386)
T ss_dssp -EEEEEE-TTT-----EEEEEE--E-SEEEEEE-TTS-SEEEEEE-------------------EEEEEETTTTEE----
T ss_pred ceEEEeeCCCC---CCceEEEe--CCceeeeEEcCCC-CEEEecCCCCCccccccccceecCCcEEEEeccccCce----
Confidence 33566667764 22211111 1233445556776 3554434332 234455544321
Q ss_pred HhhhhhccCCCceEEee-------cCCC--ceeEEEEcCCCCCEEEEEeCCC
Q psy4510 451 QREAELKDLPSQLLFIH-------LGQK--EIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~-------~~~~--~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
..+..| .++. .=....|+|++.+++..+...|
T Consensus 333 -----------~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G 373 (386)
T PF14583_consen 333 -----------RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEG 373 (386)
T ss_dssp -----------EEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTS
T ss_pred -----------eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCC
Confidence 111111 1111 2245789999988888777655
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0048 Score=65.28 Aligned_cols=95 Identities=14% Similarity=0.183 Sum_probs=76.0
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE-EEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF-AMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
...|.-+.|+|.-..+|.+..+|.+.+..+.- ..+.++.-|...+. +++|.|+| ++||.|-.||+|++-|
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~--------qRlwtip~p~~~v~~sL~W~~DG-kllaVg~kdG~I~L~D 90 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNW--------QRLWTIPIPGENVTASLCWRPDG-KLLAVGFKDGTIRLHD 90 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEecc--------ceeEeccCCCCccceeeeecCCC-CEEEEEecCCeEEEEE
Confidence 34567788889999999999999998888764 67788887777777 99999999 8999999999999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
+.++.. .......-...|.++-|.+
T Consensus 91 ve~~~~---l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 91 VEKGGR---LVSFLFSVETDISKGIWDR 115 (665)
T ss_pred ccCCCc---eeccccccccchheeeccc
Confidence 999873 1221233456788888874
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.071 Score=59.57 Aligned_cols=192 Identities=13% Similarity=0.078 Sum_probs=101.5
Q ss_pred CceEEEEeCCCCCCeEEEec------CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-CceEE
Q psy4510 177 TEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-FQLAE 249 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~------~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-~~i~v 249 (812)
..+...+.|| +|+.+|..- .|+.-.||=...+.. ....+.+. ..+.-.|+|+|+.|.+.... ..+++
T Consensus 350 ~~vsspaiSp-dG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~---~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 350 GNITSAALSR-SGRQVAAVVTLGRGAPDPASSLWVGPLGGV---AVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred cCcccceECC-CCCEEEEEEeecCCCCCcceEEEEEeCCCc---ceeeecCC--CCCCceECCCCCceEEEecCcceEEE
Confidence 4577889999 888776543 344445554332221 11122332 38889999999988877533 22222
Q ss_pred -----------eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC---CCCCcceeccccc
Q psy4510 250 -----------HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP---REAGAWQVDQKPL 315 (812)
Q Consensus 250 -----------wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~---~~~~~~~~~~~~~ 315 (812)
..+..+ .... ...+.|..+.|||+|. .++... +|.|++--+ ..+.........+
T Consensus 424 ~~~~~~gql~~~~vd~g-------e~~~---~~~g~Issl~wSpDG~-RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l 491 (591)
T PRK13616 424 IRDPATGQLARTPVDAS-------AVAS---RVPGPISELQLSRDGV-RAAMII-GGKVYLAVVEQTEDGQYALTNPREV 491 (591)
T ss_pred eccCCCceEEEEeccCc-------hhhh---ccCCCcCeEEECCCCC-EEEEEE-CCEEEEEEEEeCCCCceeecccEEe
Confidence 233322 1111 2345799999999995 444433 477777332 2222101011112
Q ss_pred c-CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 316 V-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 316 ~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
. +-...+.++.|.+++. ++ .+..++...+|.+.-........ ........+..|+-++. -++....+|.+.
T Consensus 492 ~~~l~~~~~~l~W~~~~~-L~-V~~~~~~~~v~~v~vDG~~~~~~-~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~ 563 (591)
T PRK13616 492 GPGLGDTAVSLDWRTGDS-LV-VGRSDPEHPVWYVNLDGSNSDAL-PSRNLSAPVVAVAASPS--TVYVTDARAVLQ 563 (591)
T ss_pred ecccCCccccceEecCCE-EE-EEecCCCCceEEEecCCcccccc-CCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence 2 2334468899999997 44 54555555556554322211111 11123566777877753 355556666433
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.22 Score=48.38 Aligned_cols=171 Identities=15% Similarity=0.204 Sum_probs=109.3
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCC-CCcEEEEEecCCCCCEEEEEeCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+.+.+-+..|+++.|+|+.+.|.+......-.|+=-..| ..+.++.-. -....++.|...+ .+.++--.+
T Consensus 78 akpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~G-------dlirtiPL~g~~DpE~Ieyig~n-~fvi~dER~ 149 (316)
T COG3204 78 AKPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEG-------DLIRTIPLTGFSDPETIEYIGGN-QFVIVDERD 149 (316)
T ss_pred ccccccccccccceeeCCCcceEEEecCCCceEEEEecCC-------ceEEEecccccCChhHeEEecCC-EEEEEehhc
Confidence 3445666667999999999999998887777666655544 444443211 1234467787776 566666678
Q ss_pred CcEEEEeCCCCCcc------eeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC---
Q psy4510 295 RNIHIWTPREAGAW------QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH--- 365 (812)
Q Consensus 295 g~i~vwd~~~~~~~------~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--- 365 (812)
+.+.++.+...... .+..............++|.|.+.. |..+-.-.-++|+.+......-..... ..+
T Consensus 150 ~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~-l~~aKEr~P~~I~~~~~~~~~l~~~~~-~~~~~~ 227 (316)
T COG3204 150 RALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHR-LFVAKERNPIGIFEVTQSPSSLSVHAS-LDPTAD 227 (316)
T ss_pred ceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCce-EEEEEccCCcEEEEEecCCcccccccc-cCcccc
Confidence 88998887766431 1111222222567889999999985 666666677778776632211111111 111
Q ss_pred ----CCCeEEEEEcCCC-CEEEEEeCCCcEEEEecC
Q psy4510 366 ----TSDVNVISWNRTE-PLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 366 ----~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~ 396 (812)
-..|.++.|++.. .+++-+..++.+.-.|..
T Consensus 228 ~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 228 RDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred cceEeeccccceecCCCCcEEEEecCCceEEEEecC
Confidence 2457788898755 478888888888888885
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.32 Score=51.75 Aligned_cols=223 Identities=11% Similarity=0.029 Sum_probs=135.7
Q ss_pred EEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC---CCceEEeeCCCC
Q psy4510 180 FAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD---PFQLAEHNKKRG 255 (812)
Q Consensus 180 ~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---d~~i~vwd~~~~ 255 (812)
..++.++ .+. ..++...++.|.+.|..+..... ....+. .-..++++++++.+..+.. ++.+.+.|..+.
T Consensus 77 ~~i~v~~-~~~~vyv~~~~~~~v~vid~~~~~~~~---~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 77 AGVAVNP-AGNKVYVTTGDSNTVSVIDTATNTVLG---SIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred cceeeCC-CCCeEEEecCCCCeEEEEcCcccceee---Eeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 4577888 555 66666667899999966544211 111111 5668999999988877765 567777776663
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
+.+.+...-..+ ..+++.|++...+++-..++.|.+.|......+.........-...-..+.+.|++.++.
T Consensus 151 -------~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~y 222 (381)
T COG3391 151 -------KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVY 222 (381)
T ss_pred -------eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEE
Confidence 444443322233 899999999545666667899999997665421100000112223446789999999766
Q ss_pred EEEECC--CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccC--
Q psy4510 336 ASCSVD--LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHH-- 410 (812)
Q Consensus 336 ~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h-- 410 (812)
++...+ +.+...|..+...... ....... ....+..+|+|..+.+... .+.+.+-|... ......+...
T Consensus 223 V~~~~~~~~~v~~id~~~~~v~~~--~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~---~~v~~~~~~~~~ 296 (381)
T COG3391 223 VANDGSGSNNVLKIDTATGNVTAT--DLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGAT---DRVVKTGPTGNE 296 (381)
T ss_pred EEeccCCCceEEEEeCCCceEEEe--ccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCC---Cceeeeeccccc
Confidence 666555 6888888874332111 1112222 4567889999997777644 48899999874 3333333322
Q ss_pred -CCCEEEEEEccC
Q psy4510 411 -TAPVTTVEWHPT 422 (812)
Q Consensus 411 -~~~v~~v~~~p~ 422 (812)
...+..+++.+.
T Consensus 297 ~~~~~~~~~~~~~ 309 (381)
T COG3391 297 ALGEPVSIAISPL 309 (381)
T ss_pred ccccceeccceee
Confidence 223555555543
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.42 Score=46.09 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=72.0
Q ss_pred EEEEEcCCCCeEEEEEECCCe-EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEecC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLS-IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-----DGCIHVWDLR 396 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----dg~i~iwd~~ 396 (812)
..|+|+|.-+.-++.+-.-|+ ..++|.........+.....-| -.--=.|+|+|.+|+..-. -|.|-|||.+
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RH--fyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRH--FYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCce--eecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 357788877766666666665 4678887544433322221111 1122368999998877543 3789999998
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
. .-+.+..+..|.-.-..+.|.++|. .++.+. |-|..-
T Consensus 149 ~--~fqrvgE~~t~GiGpHev~lm~DGr-tlvvan--GGIeth 186 (366)
T COG3490 149 E--GFQRVGEFSTHGIGPHEVTLMADGR-TLVVAN--GGIETH 186 (366)
T ss_pred c--ccceecccccCCcCcceeEEecCCc-EEEEeC--Cceecc
Confidence 5 5567888888888888999999984 555443 446554
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=96.71 E-value=1.6 Score=49.64 Aligned_cols=485 Identities=11% Similarity=-0.013 Sum_probs=225.0
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-----CCCCCCeeeeeEcCC--CCcEEEeeC---CCceEEe
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-----GGHTNSAEDLQWSDL--KTALQTVDD---PFQLAEH 250 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-----~~h~~~V~~l~~s~~--~~~l~s~~~---d~~i~vw 250 (812)
.+...| .++.|...-.+|.+++-.+.+.+. ......+ .-..--|.+++|... ...+++.-. +..++-|
T Consensus 118 ~~~VDp-~~R~Igl~~yqgl~~vIp~d~~~s-ht~~s~l~~fn~rfdel~v~Di~fly~~s~pt~~vly~Ds~~~Hv~~y 195 (1096)
T KOG1897|consen 118 ILLVDP-KGRVIGLHLYQGLFKVIPIDSDES-HTGGSLLKAFNVRFDELNVYDIKFLYGCSDPTLAVLYKDSDGRHVKTY 195 (1096)
T ss_pred EEEECC-CCcEEEEEeecCeEEEEEeccccc-ccCcccccccccccCcceEEEEEEEcCCCCCceEEEEEcCCCcEEEEE
Confidence 355678 999888888899998887665420 0000111 112234667777433 234554433 3446666
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-CEEEEEEcC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN-SVEDLQWSP 329 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-~v~~~~~~p 329 (812)
.++-+...-.+ .+-..--.+.....-..=+|.+ +.|+.|.. .|.--+-..-. ...++..... -+..-....
T Consensus 196 elnl~~ke~~~-~~w~~~v~~~a~~li~VP~~~g-GvlV~ge~--~I~Y~~~~~~~----ai~p~~~~~~t~~~~~~v~~ 267 (1096)
T KOG1897|consen 196 ELNLRDKEFVK-GPWSNNVDNGASMLIPVPSPIG-GVLVIGEE--FIVYMSGDNFV----AIAPLTAEQSTIVCYGRVDL 267 (1096)
T ss_pred Eeccchhhccc-cccccccccCCceeeecCCCCc-eEEEEeee--EEEEeeCCcee----EecccccCCceEEEcccccC
Confidence 66543100000 0000000122222222234444 66776653 22222211111 1122222222 222334466
Q ss_pred CCCeEEEEEECCCeEEEEECC-CCCcccc--eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC----C
Q psy4510 330 GEKRVLASCSVDLSIRIWDTR-VINTKSC--MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----S 402 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----~ 402 (812)
++. .++.|..+|.+...-+. ++++... +....-+..+-..|+..-++| ++++|+.-|.-.+-.+...... .
T Consensus 268 ~~~-~yLl~d~~G~Lf~l~l~~~~e~~s~~~lkve~lge~siassi~~L~ng-~lFvGS~~gdSqLi~L~~e~d~gsy~~ 345 (1096)
T KOG1897|consen 268 QGS-RYLLGDEDGMLFKLLLSHTGETVSGLDLKVEYLGETSIASSINYLDNG-VLFVGSRFGDSQLIKLNTEPDVGSYVV 345 (1096)
T ss_pred Ccc-EEEEecCCCcEEEEEeecccccccceEEEEEecCCcchhhhhhcccCc-eEEEeccCCceeeEEccccCCCCchhh
Confidence 777 47888899988766554 2222222 222223445556777777666 7888888777677766532111 1
Q ss_pred ceEEcccCCCCEEEEEEccC---CCcEEEEEE---CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 403 SVATFKHHTAPVTTVEWHPT---ESSTFASGG---ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~---~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
.+.++. .-+||..++.-.. +...+++++ .||++++..-.-+-.. .-.....|-+.+..+
T Consensus 346 ilet~~-NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~e--------------~A~i~l~Gikg~w~l 410 (1096)
T KOG1897|consen 346 ILETFV-NLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGIDE--------------LASIDLPGIKGMWSL 410 (1096)
T ss_pred hhhhcc-cccceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccccce--------------eeEeecCCccceeEe
Confidence 122332 3468888776543 233455544 3889999865443210 111111223344555
Q ss_pred E--EcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 477 H--WHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 477 ~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
. +.+.-+..++.+-.+..+++..... .+......-......+..+--....++-..+.....+ .-
T Consensus 411 k~~v~~~~d~ylvlsf~~eTrvl~i~~e--~ee~~~~gf~~~~~Tif~S~i~g~~lvQvTs~~iRl~---ss-------- 477 (1096)
T KOG1897|consen 411 KSMVDENYDNYLVLSFISETRVLNISEE--VEETEDPGFSTDEQTIFCSTINGNQLVQVTSNSIRLV---SS-------- 477 (1096)
T ss_pred eccccccCCcEEEEEeccceEEEEEccc--eEEeccccccccCceEEEEccCCceEEEEecccEEEE---cc--------
Confidence 4 4444444444444444444433222 1111000000111111111111111222221111111 10
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEH 634 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 634 (812)
.+.+..| ...+.++..+.+.+...++.+ +.++.+...++.....
T Consensus 478 ~~~~~~W-----------------------~~p~~~ti~~~~~n~sqVvvA--~~~~~l~y~~i~~~~l----------- 521 (1096)
T KOG1897|consen 478 AGLRSEW-----------------------RPPGKITIGVVSANASQVVVA--GGGLALFYLEIEDGGL----------- 521 (1096)
T ss_pred hhhhhcc-----------------------cCCCceEEEEEeecceEEEEe--cCccEEEEEEeeccce-----------
Confidence 0111111 112344555555666667777 5566666666654430
Q ss_pred ccccCCCCCCCCCCeeeecCCCCceEEEEeCCC--CCC---eEEecCCCceEEEEecCC-----------Cc----eeEE
Q psy4510 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPG---VLATGDCKRNIHIWTPRE-----------AG----AWSV 694 (812)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~--~~~---~las~s~Dg~v~iWd~~~-----------~~----~~~~ 694 (812)
....-+.-..+|.|+.++|. +.+ +++.|.++..+++--... ++ .+-+
T Consensus 522 -------------~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~ 588 (1096)
T KOG1897|consen 522 -------------REVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILL 588 (1096)
T ss_pred -------------eeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheee
Confidence 00011122358999999973 344 889998877766554432 11 1122
Q ss_pred EEecCCCCEEEeecCCCeEEEeecC--CCCCcccccccccCCCcceeEeEEecCCceeEEeecc
Q psy4510 695 YLYTNRFGVLATGDCKRNIHIWTPR--EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756 (812)
Q Consensus 695 ~~~s~dg~~lasgs~dg~i~iwd~~--~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~ 756 (812)
..+-.|..+|.++..||.+.-|.+. ++..- ..+.-.--+.++.=-.|+..++..++.+|.
T Consensus 589 ~~~e~d~~yLlvalgdG~l~~fv~d~~tg~ls--d~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sd 650 (1096)
T KOG1897|consen 589 TTFEGDIHYLLVALGDGALLYFVLDINTGQLS--DRKKVTLGTQPISLRTFSSKSRTAVFALSD 650 (1096)
T ss_pred EEeeccceEEEEEcCCceEEEEEEEcccceEc--cccccccCCCCcEEEEEeeCCceEEEEeCC
Confidence 3455668899999999988766554 33210 011111123455555666666545555553
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.12 Score=54.66 Aligned_cols=75 Identities=15% Similarity=0.198 Sum_probs=51.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC----------------------------------------CceEEc
Q psy4510 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----------------------------------------SSVATF 407 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----------------------------------------~~~~~~ 407 (812)
.|+.++|.+...-|++|...|.|.||.....+.. .+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 4788999988888999999999998866422111 112222
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
....++|++++.+.-| ++|.|..+|.+.|.|++..
T Consensus 83 ~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGP 117 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGP 117 (395)
T ss_dssp ---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTT
T ss_pred eccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCC
Confidence 3347899999998664 9999999999999999776
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0042 Score=57.47 Aligned_cols=107 Identities=11% Similarity=0.163 Sum_probs=64.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH 365 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 365 (812)
..+++|+.+|.|.+|.....+. ....+..-...|.++--.-+...+..+++.||.||.|++.- .+.+... ..|
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~---~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p---~k~~g~~-g~h 143 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGA---HSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKP---NKVLGYV-GQH 143 (238)
T ss_pred ceEEeecccceEEEecCCccch---HHHhhhcccccceeccccccccceeEEeccCCceeeecccc---Cceeeee-ccc
Confidence 6799999999999999874432 11122222233433332222223788999999999999872 2222222 445
Q ss_pred C-CCeEEEEEcCCCCEEEEE--eCCCcEEEEecCCCC
Q psy4510 366 T-SDVNVISWNRTEPLIVSG--GDDGCIHVWDLRRFK 399 (812)
Q Consensus 366 ~-~~v~~l~~~~~~~~l~sg--~~dg~i~iwd~~~~~ 399 (812)
. .++..+..+..+.+++.. +.|..++.|++....
T Consensus 144 ~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 144 NFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKIK 180 (238)
T ss_pred cCCCcceeEEecCCceEEeeccccchhhhhcchhhhh
Confidence 5 445555555555566666 667777777776433
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.25 Score=52.12 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=56.6
Q ss_pred CCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE---------E---ecCC---------
Q psy4510 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY---------L---YTNR--------- 700 (812)
Q Consensus 642 ~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~---------~---~s~d--------- 700 (812)
+..+..+...+......+.+++.+| .+++.|+...=|.|.++|+.++.++.+- + ....
T Consensus 293 ~~~~l~~r~~l~D~~R~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~ 371 (415)
T PF14655_consen 293 PAAPLPMRFGLPDSKREGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNS 371 (415)
T ss_pred CCcccceEEeeccCCceEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccc
Confidence 3445556677777788899999999 6888888888899999999986554321 1 1111
Q ss_pred -------CCE-EEeecCCCeEEEeecCCCCC
Q psy4510 701 -------FGV-LATGDCKRNIHIWTPREAGA 723 (812)
Q Consensus 701 -------g~~-lasgs~dg~i~iwd~~~~~~ 723 (812)
..+ ++-+-.-|.|.||.++++.+
T Consensus 372 ~~~~~~~~l~LvIyaprRg~lEvW~~~~g~R 402 (415)
T PF14655_consen 372 PKSSSRFALFLVIYAPRRGILEVWSMRQGPR 402 (415)
T ss_pred cCCCCcceEEEEEEeccCCeEEEEecCCCCE
Confidence 113 33455678889998887753
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.085 Score=54.89 Aligned_cols=183 Identities=12% Similarity=0.075 Sum_probs=101.4
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
|.|.++++..........+.+.. ....++|++++-- . +.|+.+. .+.|.+|++..... . ...........+.+
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~-~~~~g~V~ai~~~-~--~~lv~~~-g~~l~v~~l~~~~~-l-~~~~~~~~~~~i~s 134 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHS-TEVKGPVTAICSF-N--GRLVVAV-GNKLYVYDLDNSKT-L-LKKAFYDSPFYITS 134 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEE-EEESS-EEEEEEE-T--TEEEEEE-TTEEEEEEEETTSS-E-EEEEEE-BSSSEEE
T ss_pred cEEEEEEEEcccccceEEEEEEE-EeecCcceEhhhh-C--CEEEEee-cCEEEEEEccCccc-c-hhhheecceEEEEE
Confidence 88999998873000001111222 2346788888876 2 3455554 38999999988761 1 12222223336677
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC----
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK---- 399 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~---- 399 (812)
+... ++ +++.|.....+.++..+.... .+..+ .......++++.|-++++.++.+..+|.+.++......
T Consensus 135 l~~~--~~-~I~vgD~~~sv~~~~~~~~~~--~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~ 209 (321)
T PF03178_consen 135 LSVF--KN-YILVGDAMKSVSLLRYDEENN--KLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR 209 (321)
T ss_dssp EEEE--TT-EEEEEESSSSEEEEEEETTTE---EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred Eecc--cc-EEEEEEcccCEEEEEEEccCC--EEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc
Confidence 6665 34 688888888888775543111 12221 12345668888888666799999999999999886311
Q ss_pred CCC-ceE-Eccc-CCCCEEEE---EEcc--CCC-----cEEEEEECCCCEEEE
Q psy4510 400 KGS-SVA-TFKH-HTAPVTTV---EWHP--TES-----STFASGGADDQIALW 439 (812)
Q Consensus 400 ~~~-~~~-~~~~-h~~~v~~v---~~~p--~~~-----~~l~s~~~dg~v~iw 439 (812)
.+. .+. .... ....|+++ ++.| .+. ..++-++.+|.|...
T Consensus 210 ~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 210 DGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp TTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 111 122 2222 35667777 5555 222 247788889998844
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.79 Score=44.78 Aligned_cols=222 Identities=14% Similarity=0.184 Sum_probs=126.9
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
+..+|-+.+......+... .-+|...-.- ....++..+-...+.++.|+|+.+.+|++....-.|.--+. .+
T Consensus 46 f~~a~~k~~~~~~~~~~r~--~~~~l~~y~~--~i~akpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~----~G 117 (316)
T COG3204 46 FPCAWFKAGQTNGLDLSRY--IARYLLEYRA--RIDAKPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTK----EG 117 (316)
T ss_pred eeeEEEeccccccccccch--hhhccCCceE--EEeccccccccccccceeeCCCcceEEEecCCCceEEEEec----CC
Confidence 3444444442233333333 4455543221 22344456666779999999999976665554444433343 24
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-------CceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG-------SSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~-------~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
..+.+++-..-...-.|.+..++++.++--.++.+.++.+.....- -++..........-.++|.|.+. .|.
T Consensus 118 dlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~-~l~ 196 (316)
T COG3204 118 DLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDH-RLF 196 (316)
T ss_pred ceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCc-eEE
Confidence 4455554444566678888888888888778888888877631110 01111122256678999999874 666
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
.+-.-+-+.|+......... .......|...... .-..|.++.|++....+++-+..++..+--.........+
T Consensus 197 ~aKEr~P~~I~~~~~~~~~l----~~~~~~~~~~~~~~--f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~l 270 (316)
T COG3204 197 VAKERNPIGIFEVTQSPSSL----SVHASLDPTADRDL--FVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGEVIELL 270 (316)
T ss_pred EEEccCCcEEEEEecCCccc----ccccccCcccccce--EeeccccceecCCCCcEEEEecCCceEEEEecCCCeeeeE
Confidence 66666777777766432110 00000011111000 0136788999998888888888888766666666555544
Q ss_pred Eeec
Q psy4510 509 FIHL 512 (812)
Q Consensus 509 ~~~~ 512 (812)
....
T Consensus 271 sL~~ 274 (316)
T COG3204 271 SLTK 274 (316)
T ss_pred Eecc
Confidence 4433
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.12 Score=42.51 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=69.3
Q ss_pred EEEEEE---cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 322 VEDLQW---SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 322 v~~~~~---~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
|+++++ .-+|.+-|+.|+.|..||+|+-. ..+..+ .-...|++++-... ..|+.+..+|+|-+|+-.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-----e~~~Ei--~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~-- 71 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-----EIVAEI--TETDKVTSLCSLGG-GRFAYALANGTVGVYDRS-- 71 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-----cEEEEE--ecccceEEEEEcCC-CEEEEEecCCEEEEEeCc--
Confidence 455554 44566679999999999999854 234444 33566888877665 579999999999999863
Q ss_pred CCCCceEEcccCCCCEEEEEEcc---CCCcEEEEEECCCCEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHP---TESSTFASGGADDQIA 437 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p---~~~~~l~s~~~dg~v~ 437 (812)
..+...+.. ..++++.+.. +|-.-|++|-.+|.|-
T Consensus 72 ---~RlWRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 72 ---QRLWRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred ---ceeeeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 334444433 3366666543 3334688888888764
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.44 E-value=1.6 Score=46.39 Aligned_cols=233 Identities=10% Similarity=0.079 Sum_probs=132.6
Q ss_pred cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC
Q psy4510 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN 353 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 353 (812)
....+...|++....++-.....+..-+.. ... .... ...-...-..++.++.+..+++....+..|.+.|...
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~-~n~--~~~~-~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~-- 105 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDAT-SNT--VTQS-LSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTAT-- 105 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccc-cce--eeee-ccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcc--
Confidence 455677888874444444333345554444 211 1111 1111134567788999988888888889999999763
Q ss_pred cccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 354 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
.........+. ....++++++++.++.+.. ++.+.+.|.. +...+.....-..+ ..+++.|++...+++-
T Consensus 106 -~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~---t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~ 178 (381)
T COG3391 106 -NTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA---TNKVTATIPVGNTP-TGVAVDPDGNKVYVTN 178 (381)
T ss_pred -cceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCC---CCeEEEEEecCCCc-ceEEECCCCCeEEEEe
Confidence 33334332232 5678999999985555544 6888888886 34555554433345 8999999986566666
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC---CeEEEEeCCCCCccc
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS---GFNIFRTISDLPSQL 507 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 507 (812)
..++.|.+.|........ . ..............+.+.|++....++.... .+...+.....-...
T Consensus 179 ~~~~~v~vi~~~~~~v~~---------~---~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 179 SDDNTVSVIDTSGNSVVR---------G---SVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred cCCCeEEEEeCCCcceec---------c---ccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 678999999976652110 0 0000011122456788999987777776665 233333222211111
Q ss_pred EEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 508 LFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 508 ~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
....... ....+..+|++....++
T Consensus 247 ~~~~~~~-~~~~v~~~p~g~~~yv~ 270 (381)
T COG3391 247 DLPVGSG-APRGVAVDPAGKAAYVA 270 (381)
T ss_pred ccccccC-CCCceeECCCCCEEEEE
Confidence 1111111 45567788884433333
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.014 Score=54.17 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=72.1
Q ss_pred CCCeEEecCCCceEEEEecCC------------CceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCC
Q psy4510 668 EPGVLATGDCKRNIHIWTPRE------------AGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 735 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~------------~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~ 735 (812)
.+.-++.|+.+|.|.+|.... ..+...+..-.++.+..++..+|.||.|++.-++. +....+|+
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~----~g~~g~h~ 144 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKV----LGYVGQHN 144 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCce----eeeecccc
Confidence 345799999999999988763 11222233334556889999999999999987763 44556676
Q ss_pred -cceeEeEEecCCceeEEee--ccCCceEEeeecCcc
Q psy4510 736 -NSVEDLQWSPGEKRVLASC--SVDRSNRIGARRDML 769 (812)
Q Consensus 736 -~~V~~l~fs~dg~~~L~s~--s~Dg~i~iWd~~~~~ 769 (812)
.++..+..+..++ +|+.+ |.|..++.|++..-+
T Consensus 145 ~~~~e~~ivv~sd~-~i~~a~~S~d~~~k~W~ve~~~ 180 (238)
T KOG2444|consen 145 FESGEELIVVGSDE-FLKIADTSHDRVLKKWNVEKIK 180 (238)
T ss_pred CCCcceeEEecCCc-eEEeeccccchhhhhcchhhhh
Confidence 6777777777887 78888 999999999986554
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.015 Score=39.76 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=28.8
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEcc
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 206 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~ 206 (812)
.-.++|.+++||| ..++||.|+.+|.|.||.+
T Consensus 9 ~l~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 9 NLPSRVSCMSWCP-TMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCCCcEEEEEECC-CCCEEEEEECCCeEEEEEC
Confidence 3446799999999 9999999999999999987
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.59 Score=46.42 Aligned_cols=152 Identities=15% Similarity=0.122 Sum_probs=90.7
Q ss_pred CeeeeeEcCCCCcEEEee---CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 225 SAEDLQWSDLKTALQTVD---DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
.+.+.+++++++.++... ....+.++.... .....+.+ ..+..-.|++++ .+.+....+...+++.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--------~~~~~~~g--~~l~~PS~d~~g-~~W~v~~~~~~~~~~~ 93 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--------PVRPVLTG--GSLTRPSWDPDG-WVWTVDDGSGGVRVVR 93 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--------cceeeccC--CccccccccCCC-CEEEEEcCCCceEEEE
Confidence 788999999999887766 344466655443 22222233 367788999997 6666666666667764
Q ss_pred -CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE--CCCeEEEEECCCCCcc-c----ceeecCCcCCCCeEEEE
Q psy4510 302 -PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS--VDLSIRIWDTRVINTK-S----CMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 302 -~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~-~----~~~~~~~~~~~~v~~l~ 373 (812)
...+..... ......-...|..+.++|+|.++.+... .++.|.+=-+...... . ....+.......+..++
T Consensus 94 ~~~~g~~~~~-~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~ 172 (253)
T PF10647_consen 94 DSASGTGEPV-EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVA 172 (253)
T ss_pred ecCCCcceeE-EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeee
Confidence 233322111 1111111228999999999998655553 3466766654322222 1 11122123356889999
Q ss_pred EcCCCCEEEEEeCCC
Q psy4510 374 WNRTEPLIVSGGDDG 388 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg 388 (812)
|.+++.+++.+...+
T Consensus 173 W~~~~~L~V~~~~~~ 187 (253)
T PF10647_consen 173 WSDDSTLVVLGRSAG 187 (253)
T ss_pred ecCCCEEEEEeCCCC
Confidence 999998666665543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.084 Score=57.62 Aligned_cols=113 Identities=7% Similarity=0.020 Sum_probs=73.6
Q ss_pred cCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce--
Q psy4510 232 SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ-- 309 (812)
Q Consensus 232 s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~-- 309 (812)
.++|++... .++.|.+.|..+... ....+...-.-......++++|+|+.+++++..+.+|.|.|+.+.....
T Consensus 285 vkdGK~~~V--~gn~V~VID~~t~~~---~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~ 359 (635)
T PRK02888 285 VKAGKFKTI--GGSKVPVVDGRKAAN---AGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDG 359 (635)
T ss_pred hhCCCEEEE--CCCEEEEEECCcccc---CCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhc
Confidence 467776665 356799999876100 0122333323456678999999996667777779999999998754210
Q ss_pred ------eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 310 ------VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 310 ------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
....... -...-...+|.++|. ...|.-.|..|..|++..
T Consensus 360 ~~~~~~~vvaeve-vGlGPLHTaFDg~G~-aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 360 KIKPRDAVVAEPE-LGLGPLHTAFDGRGN-AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred cCCccceEEEeec-cCCCcceEEECCCCC-EEEeEeecceeEEEehHH
Confidence 0001111 122335678999987 688889999999999874
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=3.6 Score=47.55 Aligned_cols=248 Identities=13% Similarity=0.079 Sum_probs=117.3
Q ss_pred CceEEEEeCCCCCCeEEEe-----cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------C
Q psy4510 177 TEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------F 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~-----~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~ 245 (812)
-.+..+.+|| ++++||.+ +....|++-|+.++.. ....+.+- -..++|+++++.|+....+ .
T Consensus 127 ~~l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~---l~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~~~ 199 (686)
T PRK10115 127 YTLGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNW---YPELLDNV---EPSFVWANDSWTFYYVRKHPVTLLPY 199 (686)
T ss_pred EEEeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCC---CCccccCc---ceEEEEeeCCCEEEEEEecCCCCCCC
Confidence 3466788999 99988865 3334578888876642 11122221 1469999999877665432 3
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC-CCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
.+..+++.++ ...-...+........-..+.+ ++..+++.+.. ++.+.+++....... ....+..-.+..
T Consensus 200 ~v~~h~lgt~-----~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~ 272 (686)
T PRK10115 200 QVWRHTIGTP-----ASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAE--PFVFLPRRKDHE 272 (686)
T ss_pred EEEEEECCCC-----hhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCC--ceEEEECCCCCE
Confidence 4666677664 1122223333233333233334 66333433322 457888885432110 111111111222
Q ss_pred EEEEEcCCCCeEEEEEECC-CeEEEEECCCCCcccceeecCCc-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVD-LSIRIWDTRVINTKSCMLTLPNA-HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
..+. +..+. +++....+ ...+|..+...... ....+... ....|..+.+. .+.++++...+|.-+++-+.. .
T Consensus 273 ~~~~-~~~~~-ly~~tn~~~~~~~l~~~~~~~~~-~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~--~ 346 (686)
T PRK10115 273 YSLD-HYQHR-FYLRSNRHGKNFGLYRTRVRDEQ-QWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINR--K 346 (686)
T ss_pred EEEE-eCCCE-EEEEEcCCCCCceEEEecCCCcc-cCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcC--C
Confidence 2222 33333 33333322 23334333211111 11222122 23468888887 334677777777766665542 1
Q ss_pred CCceEEcc-cCCCCEEEEEEc--cCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 401 GSSVATFK-HHTAPVTTVEWH--PTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~~-~h~~~v~~v~~~--p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
...+..+. .....+..+.++ +++..++++.+. -+.+..+|+.+.
T Consensus 347 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~ 396 (686)
T PRK10115 347 TREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTG 396 (686)
T ss_pred CCceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCC
Confidence 22333333 222223333444 333345544443 356777787654
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.35 Score=48.79 Aligned_cols=159 Identities=14% Similarity=0.126 Sum_probs=81.5
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.-.+.+..+..+++|+++++++......-|+.-.. ...+. -+.-...|.+|.|.|++ .+.+.+ ..|.|++=
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~-----~w~~~--~r~~~~riq~~gf~~~~-~lw~~~-~Gg~~~~s 212 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQT-----TWQPH--NRNSSRRIQSMGFSPDG-NLWMLA-RGGQIQFS 212 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-S-----S-EEE--E--SSS-EEEEEE-TTS--EEEEE-TTTEEEEE
T ss_pred CCcceeEeEEECCCCcEEEEECcccEEEEecCCCc-----cceEE--ccCccceehhceecCCC-CEEEEe-CCcEEEEc
Confidence 34477889999999999988877777777875431 11222 22345789999999997 554444 78888887
Q ss_pred e-CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 301 T-PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 301 d-~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
+ ......|...........-.+.+++|.+++. +.++|+ .|.+.. ....+++-...... ..-...+..|.|.+..+
T Consensus 213 ~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~-~wa~gg-~G~l~~-S~DgGktW~~~~~~-~~~~~n~~~i~f~~~~~ 288 (302)
T PF14870_consen 213 DDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE-IWAVGG-SGTLLV-STDGGKTWQKDRVG-ENVPSNLYRIVFVNPDK 288 (302)
T ss_dssp E-TTEEEEE---B-TTSS--S-EEEEEESSSS--EEEEES-TT-EEE-ESSTTSS-EE-GGG-TTSSS---EEEEEETTE
T ss_pred cCCCCccccccccCCcccCceeeEEEEecCCCC-EEEEeC-CccEEE-eCCCCccceECccc-cCCCCceEEEEEcCCCc
Confidence 7 3333333333333333334589999999876 566554 454433 44433333322222 23355688888886655
Q ss_pred EEEEEeCCCcEEEE
Q psy4510 380 LIVSGGDDGCIHVW 393 (812)
Q Consensus 380 ~l~sg~~dg~i~iw 393 (812)
-++.| .+|.|--|
T Consensus 289 gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 289 GFVLG-QDGVLLRY 301 (302)
T ss_dssp EEEE--STTEEEEE
T ss_pred eEEEC-CCcEEEEe
Confidence 55554 67776544
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.99 E-value=3 Score=45.16 Aligned_cols=252 Identities=15% Similarity=0.131 Sum_probs=122.5
Q ss_pred CEEEEEEcCCCCeEEEEEECCCe----EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CC--------
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLS----IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DD-------- 387 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~----i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~d-------- 387 (812)
.+...+++|+++.++++-+..|. |+++|+.++..... .+ .......+.|.++++.|+... .+
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d--~i---~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~ 199 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD--GI---ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSG 199 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE--EE---EEEESEEEEECTTSSEEEEEECSTTTSS-CCG
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC--cc---cccccceEEEeCCCCEEEEEEeCcccccccCC
Confidence 44578899999977667666664 99999986522111 11 111223499999988544443 22
Q ss_pred --CcEEEEecCCCCCCCceEEcccCCCC--EEEEEEccCCCcEEEEEECCCC---EEEEEcCCCCchhHHHhhhhhccCC
Q psy4510 388 --GCIHVWDLRRFKKGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADDQ---IALWDLAVERDSEIEQREAELKDLP 460 (812)
Q Consensus 388 --g~i~iwd~~~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg~---v~iwd~~~~~~~~~~~~~~~~~~~~ 460 (812)
..|+.|.+.+... .....+...... ...+..++++..+++....... +.+.++..... ...
T Consensus 200 ~~~~v~~~~~gt~~~-~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~----------~~~- 267 (414)
T PF02897_consen 200 YPRQVYRHKLGTPQS-EDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGS----------PDA- 267 (414)
T ss_dssp CCEEEEEEETTS-GG-G-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTT----------SS--
T ss_pred CCcEEEEEECCCChH-hCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCC----------CcC-
Confidence 2377777764211 112344433332 6788999998655555554443 67777765410 000
Q ss_pred CceEEeecCCCce-eEEEEcCCCCCEEEEEeCCC--eEEEEeCCCCCc----c-cEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 461 SQLLFIHLGQKEI-KELHWHPQLPGTIISTANSG--FNIFRTISDLPS----Q-LLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 461 ~~~~~~~~~~~~v-~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~----~-~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
...........+ ..+... .+ .+++.+..+. ..++...-..+. . .+........+..+....+ .+++.
T Consensus 268 -~~~~l~~~~~~~~~~v~~~-~~-~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~Lvl~ 342 (414)
T PF02897_consen 268 -KPKLLSPREDGVEYYVDHH-GD-RLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKD--YLVLS 342 (414)
T ss_dssp -SEEEEEESSSS-EEEEEEE-TT-EEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETT--EEEEE
T ss_pred -CcEEEeCCCCceEEEEEcc-CC-EEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECC--EEEEE
Confidence 222222222233 333333 22 3444333221 233332222221 1 1222222224556655554 77777
Q ss_pred eeCCCceEEEEeecc-cCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE--eecC
Q psy4510 533 TANSGFNIFRTISMS-NLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG--VWGE 609 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~--~~~~ 609 (812)
...++...+..+... . . ........-.+.|..+...++++.+... +...
T Consensus 343 ~~~~~~~~l~v~~~~~~----~------------------------~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~ 394 (414)
T PF02897_consen 343 YRENGSSRLRVYDLDDG----K------------------------ESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTT 394 (414)
T ss_dssp EEETTEEEEEEEETT-T----E------------------------EEEEEESSSSSEEEEEES-TT-SEEEEEEEETTE
T ss_pred EEECCccEEEEEECCCC----c------------------------EEeeecCCcceEEeccCCCCCCCEEEEEEeCCCC
Confidence 777776666666655 1 0 0111112223345555555555544332 2244
Q ss_pred cceEEEEeccccc
Q psy4510 610 VGKVGIWDLKTAL 622 (812)
Q Consensus 610 dg~I~iwd~~~~~ 622 (812)
-++|+.||+.+++
T Consensus 395 P~~~y~~d~~t~~ 407 (414)
T PF02897_consen 395 PPTVYRYDLATGE 407 (414)
T ss_dssp EEEEEEEETTTTC
T ss_pred CCEEEEEECCCCC
Confidence 6678888988876
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.95 E-value=2 Score=42.70 Aligned_cols=166 Identities=13% Similarity=0.096 Sum_probs=91.4
Q ss_pred CCceEEcCCCC-cEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE
Q psy4510 263 PPLFSFSGHLT-EGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339 (812)
Q Consensus 263 ~~~~~~~~h~~-~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 339 (812)
.++....+... .+.+.++++++..+.+... ....++++...... ...+. ...+..-.|.+++. +.+...
T Consensus 13 ~pv~g~~~~~~~~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~-----~~~~~--g~~l~~PS~d~~g~-~W~v~~ 84 (253)
T PF10647_consen 13 TPVPGALGEGGYDVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPV-----RPVLT--GGSLTRPSWDPDGW-VWTVDD 84 (253)
T ss_pred eECCCCcCcCCccccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcc-----eeecc--CCccccccccCCCC-EEEEEc
Confidence 33333333333 6889999999954444442 33445555443322 11122 23788889999976 566656
Q ss_pred CCCeEEEEE-CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCC------CceEEccc
Q psy4510 340 VDLSIRIWD-TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG---DDGCIHVWDLRRFKKG------SSVATFKH 409 (812)
Q Consensus 340 ~dg~i~iwd-~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~------~~~~~~~~ 409 (812)
.+...+++. ...+......... ..-...|..+.++|+|..+|... .++.|.+=-+.....+ .++.....
T Consensus 85 ~~~~~~~~~~~~~g~~~~~~v~~-~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~ 163 (253)
T PF10647_consen 85 GSGGVRVVRDSASGTGEPVEVDW-PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPP 163 (253)
T ss_pred CCCceEEEEecCCCcceeEEecc-cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEeccc
Confidence 666666663 2222111111111 11112899999999998555443 4577777765432233 22223333
Q ss_pred CCCCEEEEEEccCCCcEEEEEEC-CCCEEE
Q psy4510 410 HTAPVTTVEWHPTESSTFASGGA-DDQIAL 438 (812)
Q Consensus 410 h~~~v~~v~~~p~~~~~l~s~~~-dg~v~i 438 (812)
....++.+.|.+++. +++.+.. ++.+..
T Consensus 164 ~~~~v~~v~W~~~~~-L~V~~~~~~~~~~~ 192 (253)
T PF10647_consen 164 LLSDVTDVAWSDDST-LVVLGRSAGGPVVR 192 (253)
T ss_pred ccCcceeeeecCCCE-EEEEeCCCCCceeE
Confidence 456899999999864 4444443 443444
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.32 Score=50.63 Aligned_cols=190 Identities=11% Similarity=0.010 Sum_probs=105.8
Q ss_pred CCeEEEecC----------CCcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 189 PGVLATGDC----------KRNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 189 ~~~lat~~~----------dg~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+|++|+. .|.|.++++..... .......-....++|++++-- +.+|+++ ..+.|.+|++...
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~-~g~~l~v~~l~~~- 117 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVA-VGNKLYVYDLDNS- 117 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEE-ETTEEEEEEEETT-
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEe-ecCEEEEEEccCc-
Confidence 457776632 28999999988411 111222223457889998866 3344443 3588999999884
Q ss_pred CCCCCCCCceEEcCCC--CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 257 GPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+.+.....+. ..+.++... + .+++.|+....|.++..+......... .-......++++.|-++++ .
T Consensus 118 ------~~l~~~~~~~~~~~i~sl~~~--~-~~I~vgD~~~sv~~~~~~~~~~~l~~v-a~d~~~~~v~~~~~l~d~~-~ 186 (321)
T PF03178_consen 118 ------KTLLKKAFYDSPFYITSLSVF--K-NYILVGDAMKSVSLLRYDEENNKLILV-ARDYQPRWVTAAEFLVDED-T 186 (321)
T ss_dssp ------SSEEEEEEE-BSSSEEEEEEE--T-TEEEEEESSSSEEEEEEETTTE-EEEE-EEESS-BEEEEEEEE-SSS-E
T ss_pred ------ccchhhheecceEEEEEEecc--c-cEEEEEEcccCEEEEEEEccCCEEEEE-EecCCCccEEEEEEecCCc-E
Confidence 2132222222 255555555 4 689999998999988665433211111 1122345689999987776 6
Q ss_pred EEEEECCCeEEEEECCCCC----ccc-ceeecCC-cCCCCeEEE---EEcCC--CC------EEEEEeCCCcEEEE
Q psy4510 335 LASCSVDLSIRIWDTRVIN----TKS-CMLTLPN-AHTSDVNVI---SWNRT--EP------LIVSGGDDGCIHVW 393 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~----~~~-~~~~~~~-~~~~~v~~l---~~~~~--~~------~l~sg~~dg~i~iw 393 (812)
++.+..+|.|.++...... ... .+..... .....|+++ ++.|. +. .++.++.+|.|.+.
T Consensus 187 ~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 187 IIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 9999999999999876211 111 1221111 234567777 55552 21 47778888888743
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.19 Score=57.12 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=73.9
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
-+..+|.|+..|.|-..|....-. ....=..-.++|++++|+.+|+.++.|-.+|.|.+||+..+ ++++.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~---~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~-------k~l~~ 167 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLG---PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRA-------KILKV 167 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccc---hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCC-------cceee
Confidence 566788888889998888765321 11122234579999999999999999999999999999985 66666
Q ss_pred EcCCCCcE---EEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 268 FSGHLTEG---FAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 268 ~~~h~~~v---~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
+..|..++ ..+.+..++ ..+++++..|. +|.+
T Consensus 168 i~e~~ap~t~vi~v~~t~~n-S~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 168 ITEHGAPVTGVIFVGRTSQN-SKLLTSDTGGS--FWKL 202 (1206)
T ss_pred eeecCCccceEEEEEEeCCC-cEEEEccCCCc--eEEE
Confidence 66555544 344455555 57899988886 5554
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.76 E-value=2.6 Score=42.61 Aligned_cols=231 Identities=10% Similarity=0.049 Sum_probs=124.7
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce-
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF- 266 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~- 266 (812)
.++.|+.|+.+| +.+++...... ..+ ..+..+|..+...+.-+.|++.+. +.+.++++..-....... +..
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~---~~~--i~~~~~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~~~~-~~~~ 77 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSK---PTR--ILKLSSITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVSTSA-PLAF 77 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCcc---cee--EeecceEEEEEEecccCEEEEEcC-CccEEEEchhhccccccc-cccc
Confidence 678999999888 99998833221 111 112233999999998887777754 999999987742111000 000
Q ss_pred -------EEcCCCCcEEEEE--ecCCCCCEEEEEeCCCcEEEEeCCCCCcce-eccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 267 -------SFSGHLTEGFAMD--WSSTEPGVLATGDCKRNIHIWTPREAGAWQ-VDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 267 -------~~~~h~~~v~~l~--~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
........+...+ =...+...|+.+ ..+.|.+|......... ...+.+. -...+.+++|.+ + .++
T Consensus 78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~-~i~ 152 (275)
T PF00780_consen 78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--N-KIC 152 (275)
T ss_pred cccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--C-EEE
Confidence 0111223344444 122332344444 45699999887643211 1222222 347889999983 3 366
Q ss_pred EEECCCeEEEEECCCCCcccceeecCC---------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce--E
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPN---------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--A 405 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--~ 405 (812)
.|.. ....+.|+.++... .+..... ....++..+..+ ++.+|++- +..-.+.|.. +.+. .
T Consensus 153 v~~~-~~f~~idl~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~~----G~~~r~~ 223 (275)
T PF00780_consen 153 VGTS-KGFYLIDLNTGSPS-ELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNKN----GEPSRKS 223 (275)
T ss_pred EEeC-CceEEEecCCCCce-EEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcCC----CCcCccc
Confidence 6654 45777888854322 2222111 112334444444 34555543 3334444553 2222 2
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+.... ...++.+.. + +|++.+. +.|.||++.+++
T Consensus 224 ~i~W~~-~p~~~~~~~--p-yli~~~~-~~iEV~~~~~~~ 258 (275)
T PF00780_consen 224 TIQWSS-APQSVAYSS--P-YLIAFSS-NSIEVRSLETGE 258 (275)
T ss_pred EEEcCC-chhEEEEEC--C-EEEEECC-CEEEEEECcCCc
Confidence 333333 456666653 3 5555554 559999999883
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.71 E-value=4.4 Score=44.88 Aligned_cols=228 Identities=11% Similarity=0.107 Sum_probs=113.2
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccccccCCC---CCCee-eeeEcCCCCcEEEee---------CCCceEEeeCCCCC
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH---TNSAE-DLQWSDLKTALQTVD---------DPFQLAEHNKKRGK 256 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h---~~~V~-~l~~s~~~~~l~s~~---------~d~~i~vwd~~~~~ 256 (812)
..++.++.+|.|+-+|..+++..-. ..+..+ ...+. +..+.. ..++.++ .++.+...|..++
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~--~~~~~~~~~~~~i~ssP~v~~--~~v~vg~~~~~~~~~~~~g~v~alD~~TG- 185 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWK--FGNNDQVPPGYTMTGAPTIVK--KLVIIGSSGAEFFACGVRGALRAYDVETG- 185 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeee--ecCCCCcCcceEecCCCEEEC--CEEEEeccccccccCCCCcEEEEEECCCC-
Confidence 6777777789999999888763210 111111 00111 122222 3344443 3567888888876
Q ss_pred CCCCCCCCceEEcCC-------------------C-CcE-EEEEecCCCCCEEEEEeCCC------------------cE
Q psy4510 257 GPGIPTPPLFSFSGH-------------------L-TEG-FAMDWSSTEPGVLATGDCKR------------------NI 297 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h-------------------~-~~v-~~l~~sp~~~~~l~sg~~dg------------------~i 297 (812)
+.+..+... . ..+ ...++.+.+ ++++.++.++ .|
T Consensus 186 ------~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~-g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l 258 (488)
T cd00216 186 ------KLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKT-NLVYVGTGNGSPWNWGGRRTPGDNLYTDSI 258 (488)
T ss_pred ------ceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCC-CEEEEECCCCCCCccCCccCCCCCCceeeE
Confidence 333332211 0 011 123333344 5777776554 68
Q ss_pred EEEeCCCCCc-ceecccc-----ccCCCCCE-EEEEEcCCC--CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 298 HIWTPREAGA-WQVDQKP-----LVGHTNSV-EDLQWSPGE--KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 298 ~vwd~~~~~~-~~~~~~~-----~~~h~~~v-~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
.-.|+.+++. |...... +.+...++ ..+. .-++ ..+++.++.+|.+...|.++++. +......
T Consensus 259 ~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~---~W~~~~~---- 330 (488)
T cd00216 259 VALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKL---ISARPEV---- 330 (488)
T ss_pred EEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcE---eeEeEee----
Confidence 8889988874 2211100 01111111 1111 0122 23577788899999999986543 3222111
Q ss_pred eEEEEEcCCCCEEEEE------------------eCCCcEEEEecCCCCCCCceEEcccCC--------CCE--EEEEEc
Q psy4510 369 VNVISWNRTEPLIVSG------------------GDDGCIHVWDLRRFKKGSSVATFKHHT--------APV--TTVEWH 420 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg------------------~~dg~i~iwd~~~~~~~~~~~~~~~h~--------~~v--~~v~~~ 420 (812)
...++.+| + .++.+ ..+|.|.-.|+. +++.+....... .+. ..+...
T Consensus 331 ~~~~~~~~-~-~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~---tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~ 405 (488)
T cd00216 331 EQPMAYDP-G-LVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPK---TGKVVWEKREGTIRDSWNIGFPHWGGSLATA 405 (488)
T ss_pred ccccccCC-c-eEEEccccccccCcccccCCCCCCCceEEEEEeCC---CCcEeeEeeCCccccccccCCcccCcceEec
Confidence 01122333 2 22221 235667777776 355554443220 111 112222
Q ss_pred cCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 421 PTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+ .+++.++.||.|+.+|..+++
T Consensus 406 --g-~~v~~g~~dG~l~ald~~tG~ 427 (488)
T cd00216 406 --G-NLVFAGAADGYFRAFDATTGK 427 (488)
T ss_pred --C-CeEEEECCCCeEEEEECCCCc
Confidence 3 478888899999999999884
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.062 Score=60.90 Aligned_cols=102 Identities=19% Similarity=0.356 Sum_probs=74.0
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
.++.|+..|.+...|.+.. .... .....-.++|++++|+.+|.+++.|-.+|.|.+||+. .+.+++.+..|..+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~n--L~~~-~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~---~~k~l~~i~e~~ap 174 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGN--LGPL-HQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMH---RAKILKVITEHGAP 174 (1206)
T ss_pred eEEEEcCchhhhhhhhhcc--cchh-hcCCccCCcceeeEecCCCceeccccCCCcEEEEEcc---CCcceeeeeecCCc
Confidence 5888899999999998742 1111 1113446789999999999999999999999999997 45677777777766
Q ss_pred EEEEEE---ccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 414 VTTVEW---HPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 414 v~~v~~---~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+++-+ ..++ ..++++...|. +|.+.-.
T Consensus 175 ~t~vi~v~~t~~n-S~llt~D~~Gs--f~~lv~n 205 (1206)
T KOG2079|consen 175 VTGVIFVGRTSQN-SKLLTSDTGGS--FWKLVFN 205 (1206)
T ss_pred cceEEEEEEeCCC-cEEEEccCCCc--eEEEEec
Confidence 665543 3343 46777777675 6766543
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.66 E-value=2.3 Score=41.29 Aligned_cols=219 Identities=14% Similarity=0.158 Sum_probs=121.8
Q ss_pred EEEeCCCCCCeEEEecCCCc-EEEEccCCCCcccccc----cccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEe
Q psy4510 181 AMDWSSTEPGVLATGDCKRN-IHIWTPREAGAWQVDQ----KPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEH 250 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~-v~iwd~~~~~~~~~~~----~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vw 250 (812)
.++|+|..+.-++.+-.-|+ ..++|.+....++... +.+.+|. .||+||.+|.+..+| |.|-||
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvY 145 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVY 145 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEE
Confidence 37888866777777755555 4788988877543322 3344553 689999999877643 679999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE-eCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw-d~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|...+ ...+-.+..|.-.-..+.|.+|| ..++.+. |-|..- |....+ ..+ .++
T Consensus 146 d~r~~------fqrvgE~~t~GiGpHev~lm~DG-rtlvvan--GGIethpdfgR~~------lNl-------dsM---- 199 (366)
T COG3490 146 DAREG------FQRVGEFSTHGIGPHEVTLMADG-RTLVVAN--GGIETHPDFGRTE------LNL-------DSM---- 199 (366)
T ss_pred ecccc------cceecccccCCcCcceeEEecCC-cEEEEeC--CceecccccCccc------cch-------hhc----
Confidence 99874 56677788888788899999998 5665553 445443 211110 000 111
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEE----EEecCCCCCCCce
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIH----VWDLRRFKKGSSV 404 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~----iwd~~~~~~~~~~ 404 (812)
. -++.+.|..+++... ..+++ ..+...|.-++..++|..++.+-..|.-. +.-. +..+.++
T Consensus 200 -e----------PSlvlld~atG~lie-kh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~--~~~g~~l 265 (366)
T COG3490 200 -E----------PSLVLLDAATGNLIE-KHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGH--FRKGEPL 265 (366)
T ss_pred -C----------ccEEEEeccccchhh-hccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceee--ccCCCcC
Confidence 1 111122222111111 11111 13445566777777776554443322100 0000 0012222
Q ss_pred EEcc-------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 405 ATFK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 405 ~~~~-------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.-+. .....|-+|+.+.....+.+++-..+...+||..++.
T Consensus 266 ~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~ 313 (366)
T COG3490 266 EFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGA 313 (366)
T ss_pred cccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCc
Confidence 2221 1234577888887665566666667788999999884
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=95.44 E-value=1.6 Score=49.08 Aligned_cols=232 Identities=14% Similarity=0.183 Sum_probs=115.0
Q ss_pred CCCeEEEecCCC------cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------CceEEeeCCCC
Q psy4510 188 EPGVLATGDCKR------NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------FQLAEHNKKRG 255 (812)
Q Consensus 188 ~~~~lat~~~dg------~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~~i~vwd~~~~ 255 (812)
.+.+++.||..+ .|..||..+..-. ....+. +...-.++++ -.+...++|+.+ ..+..||..+.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~--~~a~m~-~~r~~~~~~~-~~~~lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWS--SLAPMP-SPRCRVGVAV-LNGKLYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEe--ecCCCC-cccccccEEE-ECCEEEEEccccCCCcccceEEEecCCCC
Confidence 567778887773 5778888776321 122222 1222333443 334667778777 23667777765
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-----cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
. ...+..+....... +++.. +| .+.|+|+.|| +|..||..+.. |... .++.. .........-
T Consensus 360 ~-----W~~~a~M~~~R~~~-~v~~l-~g-~iYavGG~dg~~~l~svE~YDp~~~~-W~~v-a~m~~---~r~~~gv~~~ 426 (571)
T KOG4441|consen 360 Q-----WTPVAPMNTKRSDF-GVAVL-DG-KLYAVGGFDGEKSLNSVECYDPVTNK-WTPV-APMLT---RRSGHGVAVL 426 (571)
T ss_pred c-----eeccCCccCccccc-eeEEE-CC-EEEEEeccccccccccEEEecCCCCc-cccc-CCCCc---ceeeeEEEEE
Confidence 2 22222222211111 22221 23 6788888886 47778887763 3332 22221 2222222222
Q ss_pred CCeEEEEEECCC------eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEecCCCC
Q psy4510 331 EKRVLASCSVDL------SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC-----IHVWDLRRFK 399 (812)
Q Consensus 331 ~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-----i~iwd~~~~~ 399 (812)
+..+.++|+.++ ++..||..+.. ...+..+ ..-........+ ++.+.+.||.|+. |..||.+..+
T Consensus 427 ~g~iYi~GG~~~~~~~l~sve~YDP~t~~-W~~~~~M-~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~~ 502 (571)
T KOG4441|consen 427 GGKLYIIGGGDGSSNCLNSVECYDPETNT-WTLIAPM-NTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPETNQ 502 (571)
T ss_pred CCEEEEEcCcCCCccccceEEEEcCCCCc-eeecCCc-ccccccceEEEE--CCEEEEECCccCCCccceEEEEcCCCCc
Confidence 334788887554 56788877532 1111111 111111122222 4678888888763 6778886421
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
...+..+......+-.+.+ +..+.++|+.|| +|..||..+.
T Consensus 503 -W~~v~~m~~~rs~~g~~~~---~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 503 -WTMVAPMTSPRSAVGVVVL---GGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred -eeEcccCccccccccEEEE---CCEEEEEecccCccccceeEEcCCCCC
Confidence 2222223222222222222 346888888776 4555655544
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.31 E-value=2.9 Score=43.46 Aligned_cols=253 Identities=13% Similarity=0.058 Sum_probs=115.3
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC-cccc-cccccCCCCCCeeeeeEcCC---CCcEEEeeC-C------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-AWQV-DQKPLGGHTNSAEDLQWSDL---KTALQTVDD-P------ 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~-~~~~-~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~-d------ 244 (812)
+..+.|+|.| +|+++++-- .|.|++++..... .... ..............++++|+ ..+|..... .
T Consensus 2 ~~P~~~a~~p-dG~l~v~e~-~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 2 NNPRSMAFLP-DGRLLVAER-SGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SSEEEEEEET-TSCEEEEET-TTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CCceEEEEeC-CCcEEEEeC-CceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 3468899999 888877655 8999999833222 1111 11234455667899999995 233333322 1
Q ss_pred --CceEEeeCCCCCCCCCCCCCce-EEcC---CCCcEEEEEecCCCCCEEEEEeCCCc-----------EEEEeCCCCCc
Q psy4510 245 --FQLAEHNKKRGKGPGIPTPPLF-SFSG---HLTEGFAMDWSSTEPGVLATGDCKRN-----------IHIWTPREAGA 307 (812)
Q Consensus 245 --~~i~vwd~~~~~~~~~~~~~~~-~~~~---h~~~v~~l~~sp~~~~~l~sg~~dg~-----------i~vwd~~~~~~ 307 (812)
..|.-|....+.......+.+. .+.. .......|.|.|++ .+.++.+..+. =+|+.+...+.
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 2344444433200000011111 1122 22345679999998 55444433222 11222211111
Q ss_pred cee----------cccc-ccCCCCCEEEEEEcCC-CCeEEEEE-ECCCeEEEEECCCCCc--------------------
Q psy4510 308 WQV----------DQKP-LVGHTNSVEDLQWSPG-EKRVLASC-SVDLSIRIWDTRVINT-------------------- 354 (812)
Q Consensus 308 ~~~----------~~~~-~~~h~~~v~~~~~~p~-~~~~l~s~-~~dg~i~iwd~~~~~~-------------------- 354 (812)
... .... -.++. ....++|+|. +. ++++= +.++.=.|--++.+..
T Consensus 159 ~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~-l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~ 236 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGR-LWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDA 236 (331)
T ss_dssp B-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTE-EEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTG
T ss_pred CCCCCccccCCCceEEEEEeCCC-ccccEEEECCCCc-EEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccc
Confidence 000 0000 01222 3468899998 55 44332 3333222222221110
Q ss_pred ------ccceeecCCcCCCCeEEEEEcCC-------CCEEEEEeCCCcEEEEecCCCCCCCceE-EcccCCCCEEEEEEc
Q psy4510 355 ------KSCMLTLPNAHTSDVNVISWNRT-------EPLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWH 420 (812)
Q Consensus 355 ------~~~~~~~~~~~~~~v~~l~~~~~-------~~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~ 420 (812)
..++..+ .+...+..+.|.+. +.+|++.-..+.|....+.......... .+......+..|++.
T Consensus 237 ~~~~~~~~P~~~~--~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~ 314 (331)
T PF07995_consen 237 PSCPGFVPPVFAY--PPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG 314 (331)
T ss_dssp SS-TTS---SEEE--TTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred cCCCCcCccceee--cCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence 0112222 23355667777643 3356666556777777775311101111 223445589999999
Q ss_pred cCCCcEEEEEECCCCEE
Q psy4510 421 PTESSTFASGGADDQIA 437 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~ 437 (812)
|+| .++++...+|.|.
T Consensus 315 pDG-~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 315 PDG-ALYVSDDSDGKIY 330 (331)
T ss_dssp TTS-EEEEEE-TTTTEE
T ss_pred CCC-eEEEEECCCCeEe
Confidence 997 4666666788764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.29 E-value=4.4 Score=42.18 Aligned_cols=52 Identities=19% Similarity=0.272 Sum_probs=34.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc----ccCCCCEEEEEEccC
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF----KHHTAPVTTVEWHPT 422 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~v~~~p~ 422 (812)
...|+|.|+|+++++ ...|.|++++... .....+..+ .........++++|+
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~~~g-~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVDKDG-SLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEETTT-EECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEeCCC-cCcceecccccccccccCCcccceeccc
Confidence 578999999977665 5699999999332 111233333 234567899999994
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.29 Score=52.21 Aligned_cols=159 Identities=14% Similarity=0.247 Sum_probs=88.1
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCC----CCEEEEEe
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE----PGVLATGD 292 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~----~~~l~sg~ 292 (812)
|..--.+|..++|.+-.+.+++.- ..|.++.=| .+ .-|.-..|.++.|.|-+ +.+||+ -
T Consensus 15 L~qAiHPvhGlaWTDGkqVvLT~L~l~~gE~kfGd----------s~----viGqFEhV~GlsW~P~~~~~~paLLAV-Q 79 (671)
T PF15390_consen 15 LHQAIHPVHGLAWTDGKQVVLTDLQLHNGEPKFGD----------SK----VIGQFEHVHGLSWAPPCTADTPALLAV-Q 79 (671)
T ss_pred HHhhhccccceEecCCCEEEEEeeeeeCCccccCC----------cc----EeeccceeeeeeecCcccCCCCceEEE-e
Confidence 333446888999964444444432 222222111 11 22334568999999963 334544 4
Q ss_pred CCCcEEEEeCCCCC----cceeccccccCCCCC--EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC
Q psy4510 293 CKRNIHIWTPREAG----AWQVDQKPLVGHTNS--VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366 (812)
Q Consensus 293 ~dg~i~vwd~~~~~----~~~~~~~~~~~h~~~--v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 366 (812)
....|.||.+.... ++...+..-.+..-+ -..+.|+|... +|+.-.....-.+++++..+.. +. ..-...
T Consensus 80 HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~-iL~VLT~~dvSV~~sV~~d~sr--Vk-aDi~~~ 155 (671)
T PF15390_consen 80 HKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKA-ILTVLTARDVSVLPSVHCDSSR--VK-ADIKTS 155 (671)
T ss_pred ccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCc-eEEEEecCceeEeeeeeeCCce--EE-EeccCC
Confidence 56899999986322 111111100001111 24578999988 5666555555566777654322 21 113456
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEecC
Q psy4510 367 SDVNVISWNRTEPLIVSG-GDDGCIHVWDLR 396 (812)
Q Consensus 367 ~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~ 396 (812)
+.|.|.+|.++|+.|+.+ +..=.-+|||-.
T Consensus 156 G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 156 GLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred ceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 789999999999855443 444456788865
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=95.14 E-value=6.7 Score=43.45 Aligned_cols=203 Identities=11% Similarity=0.130 Sum_probs=98.6
Q ss_pred CCeEEEecCCCcEEEEccCCCCcc-ccccccc-CCCCCCee--eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAW-QVDQKPL-GGHTNSAE--DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPP 264 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l-~~h~~~V~--~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 264 (812)
+..+..++.++.|+-.|..+++.. ....... ......+. .++.. ++..++.++.++.+..+|.+++ +.
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG-------~~ 132 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETG-------KQ 132 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCC-------CE
Confidence 344555666788888887776532 1111000 00001111 11111 2256777888999999999887 44
Q ss_pred ceEEcCCCC--cEEEEEecC--CCCCEEEEEe---------CCCcEEEEeCCCCCc-ceecccc-----ccC--------
Q psy4510 265 LFSFSGHLT--EGFAMDWSS--TEPGVLATGD---------CKRNIHIWTPREAGA-WQVDQKP-----LVG-------- 317 (812)
Q Consensus 265 ~~~~~~h~~--~v~~l~~sp--~~~~~l~sg~---------~dg~i~vwd~~~~~~-~~~~~~~-----~~~-------- 317 (812)
+..+..... .-..+.-+| .+ .+++.++ .+|.|..+|..+++. |...... +..
T Consensus 133 ~W~~~~~~~~~~~~~i~ssP~v~~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~ 211 (488)
T cd00216 133 VWKFGNNDQVPPGYTMTGAPTIVK-KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMW 211 (488)
T ss_pred eeeecCCCCcCcceEecCCCEEEC-CEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCccee
Confidence 443332211 011111112 11 3455553 357888889888763 2211100 000
Q ss_pred -CC-CCE-EEEEEcCCCCeEEEEEECCC------------------eEEEEECCCCCcccceeecCCc-CC--------C
Q psy4510 318 -HT-NSV-EDLQWSPGEKRVLASCSVDL------------------SIRIWDTRVINTKSCMLTLPNA-HT--------S 367 (812)
Q Consensus 318 -h~-~~v-~~~~~~p~~~~~l~s~~~dg------------------~i~iwd~~~~~~~~~~~~~~~~-~~--------~ 367 (812)
+. ..| ...++.+.+. +++.++.++ .|.-.|+.+++.. ...... |. .
T Consensus 212 ~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~---W~~~~~~~~~~~~~~~s~ 287 (488)
T cd00216 212 GPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVK---WFYQTTPHDLWDYDGPNQ 287 (488)
T ss_pred cCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEE---EEeeCCCCCCcccccCCC
Confidence 00 011 1234444445 456665554 6888888865433 322111 11 1
Q ss_pred Ce-EEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 368 DV-NVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 368 ~v-~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
++ ..+. .-++. .++.++.+|.+...|.+ +++.+....
T Consensus 288 p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~---tG~~~W~~~ 328 (488)
T cd00216 288 PSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRT---TGKLISARP 328 (488)
T ss_pred CeEEecc-ccCCCeeEEEEEECCCceEEEEECC---CCcEeeEeE
Confidence 11 1110 11232 68888899999999998 466666543
|
The alignment model contains an 8-bladed beta-propeller. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.14 E-value=4.4 Score=41.31 Aligned_cols=192 Identities=13% Similarity=0.097 Sum_probs=100.5
Q ss_pred CCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec
Q psy4510 233 DLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 233 ~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 311 (812)
++...|.-+. ..+.|..|+..++ ....+.. .+.+.++..-..+ +.|+++. ..+.++++..+..+...
T Consensus 34 ~~~~~L~w~DI~~~~i~r~~~~~g--------~~~~~~~-p~~~~~~~~~d~~-g~Lv~~~--~g~~~~~~~~~~~~t~~ 101 (307)
T COG3386 34 PDRGALLWVDILGGRIHRLDPETG--------KKRVFPS-PGGFSSGALIDAG-GRLIACE--HGVRLLDPDTGGKITLL 101 (307)
T ss_pred CCCCEEEEEeCCCCeEEEecCCcC--------ceEEEEC-CCCcccceeecCC-CeEEEEc--cccEEEeccCCceeEEe
Confidence 5555444433 5667777877653 2223332 2333444443333 5666654 34677777655432222
Q ss_pred cccccCCC-CCEEEEEEcCCCCeEEEEEE-----C-----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 312 QKPLVGHT-NSVEDLQWSPGEKRVLASCS-----V-----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 312 ~~~~~~h~-~~v~~~~~~p~~~~~l~s~~-----~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
.....+.. ...+++...|+|..++-+-+ . -|.|+..|.. . ....+...+-..-|.|+|+|+++.
T Consensus 102 ~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~----g-~~~~l~~~~~~~~NGla~SpDg~t 176 (307)
T COG3386 102 AEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPD----G-GVVRLLDDDLTIPNGLAFSPDGKT 176 (307)
T ss_pred ccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCC----C-CEEEeecCcEEecCceEECCCCCE
Confidence 22222222 46688999999983332222 1 1333333421 1 122222444556689999999986
Q ss_pred EEEEe-CCCcEEEEecCC--CCC-C-CceEEcccCCCCEEEEEEccCCCcEEEEEECCC-CEEEEEcC
Q psy4510 381 IVSGG-DDGCIHVWDLRR--FKK-G-SSVATFKHHTAPVTTVEWHPTESSTFASGGADD-QIALWDLA 442 (812)
Q Consensus 381 l~sg~-~dg~i~iwd~~~--~~~-~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~v~iwd~~ 442 (812)
|+... ..+.|.-|++.. ... . .....+....+..-.++...+| .+.+++..+| .|.+|+..
T Consensus 177 ly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG-~lw~~a~~~g~~v~~~~pd 243 (307)
T COG3386 177 LYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADG-NLWVAAVWGGGRVVRFNPD 243 (307)
T ss_pred EEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCC-CEEEecccCCceEEEECCC
Confidence 65554 458888888752 101 1 1122222334555566676665 3443444443 88888887
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.72 Score=49.39 Aligned_cols=165 Identities=12% Similarity=0.170 Sum_probs=96.0
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC----CcEEEe
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK----TALQTV 241 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~----~~l~s~ 241 (812)
-+..+..-..+|..++|.. ....+.|.- .+|.+++=| ...-|.-..|..+.|.|-+ ..|++.
T Consensus 11 GlNaL~qAiHPvhGlaWTD-GkqVvLT~L~l~~gE~kfGd-----------s~viGqFEhV~GlsW~P~~~~~~paLLAV 78 (671)
T PF15390_consen 11 GLNALHQAIHPVHGLAWTD-GKQVVLTDLQLHNGEPKFGD-----------SKVIGQFEHVHGLSWAPPCTADTPALLAV 78 (671)
T ss_pred chHHHHhhhccccceEecC-CCEEEEEeeeeeCCccccCC-----------ccEeeccceeeeeeecCcccCCCCceEEE
Confidence 3444433456788899955 333344431 222222211 1233455679999999863 467777
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEEcCCCC---c--EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT---E--GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~---~--v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
.....|.||.+.-.... ..+.+.+...+-+ + -.++.|+|.. .+|+.-.....-.+.++...... ....+
T Consensus 79 QHkkhVtVWqL~~s~~e--~~K~l~sQtcEi~e~~pvLpQGCVWHPk~-~iL~VLT~~dvSV~~sV~~d~sr--VkaDi- 152 (671)
T PF15390_consen 79 QHKKHVTVWQLCPSTTE--RNKLLMSQTCEIREPFPVLPQGCVWHPKK-AILTVLTARDVSVLPSVHCDSSR--VKADI- 152 (671)
T ss_pred eccceEEEEEeccCccc--cccceeeeeeeccCCcccCCCcccccCCC-ceEEEEecCceeEeeeeeeCCce--EEEec-
Confidence 88899999998642111 1222222222111 1 2478899987 56555544444456666655421 11122
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
...+-|.|.+|.++|++++++.+..=.-+|||-.
T Consensus 153 ~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 153 KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence 3567899999999999877776665667899865
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.35 Score=50.72 Aligned_cols=141 Identities=11% Similarity=0.085 Sum_probs=90.3
Q ss_pred EEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC--c-----EEEeeCCCceEEeeCCCCCCCCCCCCC
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT--A-----LQTVDDPFQLAEHNKKRGKGPGIPTPP 264 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~--~-----l~s~~~d~~i~vwd~~~~~~~~~~~~~ 264 (812)
|.+++....++--|++.++ .+..-.-|.. |.-+.+.|+.+ + -+.|-.+..|.-||.+-.. ...
T Consensus 349 l~~~~~~~~l~klDIE~GK----IVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~-----~~k 418 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGK----IVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQG-----KNK 418 (644)
T ss_pred eeCCCCcCcceeeecccce----eeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccC-----cce
Confidence 3455555667777777776 3333444444 77777777764 2 2334467788889987531 112
Q ss_pred ceEEcCCC----CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 265 LFSFSGHL----TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 265 ~~~~~~h~----~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+....+|. ....|.+-..+ +++++|+.+|.|++||- .+.. ....+.+...+|..+..+.+|+.+|+||
T Consensus 419 l~~~q~kqy~~k~nFsc~aTT~s--G~IvvgS~~GdIRLYdr-i~~~---AKTAlPgLG~~I~hVdvtadGKwil~Tc-- 490 (644)
T KOG2395|consen 419 LAVVQSKQYSTKNNFSCFATTES--GYIVVGSLKGDIRLYDR-IGRR---AKTALPGLGDAIKHVDVTADGKWILATC-- 490 (644)
T ss_pred eeeeeccccccccccceeeecCC--ceEEEeecCCcEEeehh-hhhh---hhhcccccCCceeeEEeeccCcEEEEec--
Confidence 22222332 23344444433 79999999999999997 3322 3456778889999999999999655554
Q ss_pred CCeEEEEECC
Q psy4510 341 DLSIRIWDTR 350 (812)
Q Consensus 341 dg~i~iwd~~ 350 (812)
+..+.+-++.
T Consensus 491 ~tyLlLi~t~ 500 (644)
T KOG2395|consen 491 KTYLLLIDTL 500 (644)
T ss_pred ccEEEEEEEe
Confidence 5778887765
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=95.07 E-value=5.7 Score=42.24 Aligned_cols=157 Identities=10% Similarity=0.177 Sum_probs=87.7
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC---CCCeEEEEEECCCeEEEEECCCCCcc--
Q psy4510 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKRVLASCSVDLSIRIWDTRVINTK-- 355 (812)
Q Consensus 281 sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p---~~~~~l~s~~~dg~i~iwd~~~~~~~-- 355 (812)
++++...+++|+..|.++||++...........--..-..+|..+..-+ ......++.-.-..+.+|.+......
T Consensus 33 ~~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~ 112 (418)
T PF14727_consen 33 SPSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVE 112 (418)
T ss_pred CCCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcc
Confidence 3445578999999999999999665421111111122345777776543 22222334455678888887422111
Q ss_pred ---cceeecCCcCC--CCeEEEEEcCCC-----CEEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEccCC
Q psy4510 356 ---SCMLTLPNAHT--SDVNVISWNRTE-----PLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHPTE 423 (812)
Q Consensus 356 ---~~~~~~~~~~~--~~v~~l~~~~~~-----~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~ 423 (812)
.....+...|. .....++.-|.| .+|.+-+.||.+.+|+-+... ....+.. ..+| +.+.|.-
T Consensus 113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~---f~~~lp~~llPgP---l~Y~~~t 186 (418)
T PF14727_consen 113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA---FSRFLPDFLLPGP---LCYCPRT 186 (418)
T ss_pred cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE---EEEEcCCCCCCcC---eEEeecC
Confidence 01111112232 223334433332 388889999999999986311 1112221 2334 5666764
Q ss_pred CcEEEEEECCCCEEEEEcCCC
Q psy4510 424 SSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 424 ~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..|++++.+..+.-|.....
T Consensus 187 -Dsfvt~sss~~l~~Yky~~L 206 (418)
T PF14727_consen 187 -DSFVTASSSWTLECYKYQDL 206 (418)
T ss_pred -CEEEEecCceeEEEecHHHh
Confidence 47888888888888876543
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.05 E-value=4.4 Score=40.91 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=76.4
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
..++.|+.|+.+| |.++++.. ........ +...|..+...|.-. .|++-+ |+.+.++++.......... ...
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~--~~~~~~i~--~~~~I~ql~vl~~~~-~llvLs-d~~l~~~~L~~l~~~~~~~-~~~ 76 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSD--PSKPTRIL--KLSSITQLSVLPELN-LLLVLS-DGQLYVYDLDSLEPVSTSA-PLA 76 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecC--CccceeEe--ecceEEEEEEecccC-EEEEEc-CCccEEEEchhhccccccc-ccc
Confidence 3567899999998 99999942 22222222 233499999999754 444443 5999999998774321100 000
Q ss_pred hccCCCceEEeecCCCceeEEE--EcCCCCCEEEEEeCCCeEEEEeCCCC-Cc-ccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 456 LKDLPSQLLFIHLGQKEIKELH--WHPQLPGTIISTANSGFNIFRTISDL-PS-QLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~~v~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
.... ..........+.+..++ -...+...++.+....+.+|...... .. .......-...+..++|..+ ..++
T Consensus 77 ~~~~-~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~--~i~v 153 (275)
T PF00780_consen 77 FPKS-RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGN--KICV 153 (275)
T ss_pred cccc-ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEeCC--EEEE
Confidence 0000 00000111112333333 12223345555555577777655432 22 23333344468888999855 5555
Q ss_pred Ee
Q psy4510 532 ST 533 (812)
Q Consensus 532 ~~ 533 (812)
+.
T Consensus 154 ~~ 155 (275)
T PF00780_consen 154 GT 155 (275)
T ss_pred Ee
Confidence 54
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.98 Score=50.64 Aligned_cols=159 Identities=9% Similarity=0.080 Sum_probs=90.4
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee-cCCCCceEEEEeCCC-CCCeEEecC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF-SGHLTEGFAMDWSST-EPGVLATGD 676 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~l~~sp~-~~~~las~s 676 (812)
..++++| ..+.|.||+.....+................ .........+. ..| .|.-+...-. +..+|+.+.
T Consensus 49 ~n~LFiA---~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~--~~~~D~~~s~~p~PH--tIN~i~v~~lg~~EVLl~c~ 121 (717)
T PF08728_consen 49 RNLLFIA---YQSEIYVYDPDGLTQLPSRKPCLRFDTKPEF--TSTPDRLISTWPFPH--TINFIKVGDLGGEEVLLLCT 121 (717)
T ss_pred CCEEEEE---ECCEEEEEecCCcccccccccccccccCccc--cccccccccCCCCCc--eeeEEEecccCCeeEEEEEe
Confidence 7778877 4679999998765432110000000000000 00000011111 223 3444444321 456899999
Q ss_pred CCceEEEEecCC------------------------------CceeEEEEec-CCCCEEEeecCCCeEEEeecCCCCCcc
Q psy4510 677 CKRNIHIWTPRE------------------------------AGAWSVYLYT-NRFGVLATGDCKRNIHIWTPREAGAWQ 725 (812)
Q Consensus 677 ~Dg~v~iWd~~~------------------------------~~~~~~~~~s-~dg~~lasgs~dg~i~iwd~~~~~~~~ 725 (812)
.||.|.+|.+++ ...|.+...+ ...++||+++....|.||-...... +
T Consensus 122 DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~-r 200 (717)
T PF08728_consen 122 DDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDE-R 200 (717)
T ss_pred cCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccc-c
Confidence 999999997743 1223444332 5567889999888888887654321 0
Q ss_pred cccccccCCCcceeEeEEecCC--c---eeEEeeccCCceEEeee
Q psy4510 726 VDQKPLVGHTNSVEDLQWSPGE--K---RVLASCSVDRSNRIGAR 765 (812)
Q Consensus 726 ~~~~~~~gH~~~V~~l~fs~dg--~---~~L~s~s~Dg~i~iWd~ 765 (812)
.....-..|...|-+|+|-++. . -.|++++-.|.+.+|++
T Consensus 201 ~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 201 FYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 0111122355679999998765 1 15889999999999988
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.6 Score=53.70 Aligned_cols=142 Identities=13% Similarity=0.142 Sum_probs=90.3
Q ss_pred cEEEEEecCCCCCE-EEEEeCCCcEEEEeCCCCCccee-ccccccC------CCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 274 EGFAMDWSSTEPGV-LATGDCKRNIHIWTPREAGAWQV-DQKPLVG------HTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 274 ~v~~l~~sp~~~~~-l~sg~~dg~i~vwd~~~~~~~~~-~~~~~~~------h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
.+..+..++++... ++..+.+-.|..||+++-..... ....+.. ......++.|+|.-....+.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 45556666665222 33334445788999876432110 0122222 2335678899998776688899999999
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc---C-CCCEEEEEEcc
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH---H-TAPVTTVEWHP 421 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---h-~~~v~~v~~~p 421 (812)
+..+.... ..+..+ .-...++|++|+|.|..++.|-..|++.-|-.. .+....+.. . ...|.+|+|-.
T Consensus 182 V~~~~~~~--~~v~s~--p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~----leik~~ip~Pp~~e~yrvl~v~Wl~ 253 (1405)
T KOG3630|consen 182 VKSTKQLA--QNVTSF--PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS----LEIKSEIPEPPVEENYRVLSVTWLS 253 (1405)
T ss_pred hhhhhhhh--hhhccc--CcccceeeEEeccccceeeEecCCCeEEEeecc----cceeecccCCCcCCCcceeEEEEec
Confidence 98876321 112222 345678999999999999999999999988764 222222211 1 46799999987
Q ss_pred CC
Q psy4510 422 TE 423 (812)
Q Consensus 422 ~~ 423 (812)
..
T Consensus 254 t~ 255 (1405)
T KOG3630|consen 254 TQ 255 (1405)
T ss_pred ce
Confidence 64
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.012 Score=64.72 Aligned_cols=187 Identities=14% Similarity=0.160 Sum_probs=107.7
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.+.|++=+..+.-. ....+++..+.|-.++|.... ..++ ..-|.+.||++.--.+.....-.+.....-...+.
T Consensus 110 ~~~vrvaN~~~sm~---~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~ 184 (1283)
T KOG1916|consen 110 ENGVRVANQEPSMR---HNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQ 184 (1283)
T ss_pred hhhhhhccCcchhH---HHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcc
Confidence 35566665544321 234567778888888884322 1122 34467888987653211111111122222334456
Q ss_pred EEEecCCC--CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE-----------EcCCCCeEEEEEECCCe
Q psy4510 277 AMDWSSTE--PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ-----------WSPGEKRVLASCSVDLS 343 (812)
Q Consensus 277 ~l~~sp~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~-----------~~p~~~~~l~s~~~dg~ 343 (812)
-+.|+|-- ..++..+..+++|++..+.... ...+.+|...+.+++ .+|||. +|+.++.||.
T Consensus 185 ~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~-----~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt-v~a~a~~dG~ 258 (1283)
T KOG1916|consen 185 LVSWCPIAVNKVYICYGLKGGEIRLLNINRAL-----RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGT-VFAWAISDGS 258 (1283)
T ss_pred eeeecccccccceeeeccCCCceeEeeechHH-----HHHHHhcCCCcccHHHHhhchhhheeeCCCCc-EEEEeecCCc
Confidence 67777632 2567788889999998887654 345566777776654 589998 7999999999
Q ss_pred EEEEECCCCC--cccceeecCCcCC-CCeEEEEEcCCC---------CEEEEEeC-CCcEEEEecC
Q psy4510 344 IRIWDTRVIN--TKSCMLTLPNAHT-SDVNVISWNRTE---------PLIVSGGD-DGCIHVWDLR 396 (812)
Q Consensus 344 i~iwd~~~~~--~~~~~~~~~~~~~-~~v~~l~~~~~~---------~~l~sg~~-dg~i~iwd~~ 396 (812)
++.|.+.-.. ...|+... ..|. .+-.|.-++.+. .+++++++ +..+++|...
T Consensus 259 v~f~Qiyi~g~~~~rclhew-kphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a 323 (1283)
T KOG1916|consen 259 VGFYQIYITGKIVHRCLHEW-KPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEA 323 (1283)
T ss_pred cceeeeeeeccccHhhhhcc-CCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeecc
Confidence 9998764211 23344444 5555 333333343321 13455443 4568888875
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=94.67 E-value=2.5 Score=44.13 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=49.6
Q ss_pred CCceEEEEecCCCceeEEEE--------------ecCCCCEEEeec-CCCeEEEeecCCCCCcccc--------------
Q psy4510 677 CKRNIHIWTPREAGAWSVYL--------------YTNRFGVLATGD-CKRNIHIWTPREAGAWQVD-------------- 727 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~~~~~--------------~s~dg~~lasgs-~dg~i~iwd~~~~~~~~~~-------------- 727 (812)
...++.+||+.+.+....+- ..|+..+-.+|+ -..+|..|--.....|...
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 45789999999976665442 233333333332 2334444433333334311
Q ss_pred ----cccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcceEEEE
Q psy4510 728 ----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDMLYCFFV 774 (812)
Q Consensus 728 ----~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~~~~~~ 774 (812)
++.+..-..-|++|..|.|.+++.+++=.+|.||.|||.++....+.
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~ 350 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLV 350 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEE
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEE
Confidence 11111123458999999999987888999999999999998744443
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.12 Score=35.43 Aligned_cols=32 Identities=38% Similarity=0.580 Sum_probs=28.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 365 ~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
....|.+++|+|...+||.|+.+|.|.++.+.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 34569999999999999999999999999983
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=94.42 E-value=8.2 Score=41.07 Aligned_cols=158 Identities=9% Similarity=0.052 Sum_probs=91.5
Q ss_pred CCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC----CCCcEEEeeCCCceEEeeCCCCCCCCCC-
Q psy4510 187 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD----LKTALQTVDDPFQLAEHNKKRGKGPGIP- 261 (812)
Q Consensus 187 ~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~----~~~~l~s~~~d~~i~vwd~~~~~~~~~~- 261 (812)
++...|++|+..|.++||+....+........-..-+.+|..++.-+ .....++.=....+.||.+....+....
T Consensus 35 ~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 35 SGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence 35679999999999999998654421112222233456788776543 2333444457788889988442111000
Q ss_pred -CCCceEEcCCC--CcEEEEEecCC----CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 262 -TPPLFSFSGHL--TEGFAMDWSST----EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 262 -~~~~~~~~~h~--~~v~~l~~sp~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
.-.+..+..|. ...+.+++-|- +..+++.=+.||.+.+++-+.-. ..+.+.+ .--...++|.+.-. .
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~----f~~~lp~-~llPgPl~Y~~~tD-s 188 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA----FSRFLPD-FLLPGPLCYCPRTD-S 188 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE----EEEEcCC-CCCCcCeEEeecCC-E
Confidence 01112222333 22344444332 23678888999999999976543 1222222 12223467777777 5
Q ss_pred EEEEECCCeEEEEECC
Q psy4510 335 LASCSVDLSIRIWDTR 350 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~ 350 (812)
|++++.+..|..|...
T Consensus 189 fvt~sss~~l~~Yky~ 204 (418)
T PF14727_consen 189 FVTASSSWTLECYKYQ 204 (418)
T ss_pred EEEecCceeEEEecHH
Confidence 8889888899888653
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=2.3 Score=47.90 Aligned_cols=147 Identities=10% Similarity=0.096 Sum_probs=74.7
Q ss_pred CEEEEEeCCC-----cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC------------------
Q psy4510 286 GVLATGDCKR-----NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL------------------ 342 (812)
Q Consensus 286 ~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------------------ 342 (812)
.+.+.||.++ ++..||+.+. .|.. ...+.........+.. ++. +.+.|+.++
T Consensus 353 ~IYviGG~~~~~~~~sve~Ydp~~~-~W~~-~~~mp~~r~~~~~~~~--~g~-IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 353 TIYAIGGQNGTNVERTIECYTMGDD-KWKM-LPDMPIALSSYGMCVL--DQY-IYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred EEEEECCcCCCCCCceEEEEECCCC-eEEE-CCCCCcccccccEEEE--CCE-EEEEeCCCccccccccccccccccccc
Confidence 5777777654 4888998875 3443 2222221111122222 344 777777653
Q ss_pred -----eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC------cEEEEecCCCCCCCceEEcccCC
Q psy4510 343 -----SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG------CIHVWDLRRFKKGSSVATFKHHT 411 (812)
Q Consensus 343 -----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg------~i~iwd~~~~~~~~~~~~~~~h~ 411 (812)
.+..||..+.. ...+..+.... .....+. -++.+.+.||.++ .+..||.........+..+....
T Consensus 428 ~~~~~~ve~YDP~td~-W~~v~~m~~~r-~~~~~~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r 503 (557)
T PHA02713 428 THSSNKVIRYDTVNNI-WETLPNFWTGT-IRPGVVS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL 503 (557)
T ss_pred ccccceEEEECCCCCe-EeecCCCCccc-ccCcEEE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc
Confidence 46778876431 22222221111 1111222 2466777777542 36788887411233344444333
Q ss_pred CCEEEEEEccCCCcEEEEEECCC--CEEEEEcCCC
Q psy4510 412 APVTTVEWHPTESSTFASGGADD--QIALWDLAVE 444 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg--~v~iwd~~~~ 444 (812)
.....+.+ ++.+.++||.++ .+..||..+.
T Consensus 504 ~~~~~~~~---~~~iyv~Gg~~~~~~~e~yd~~~~ 535 (557)
T PHA02713 504 SALHTILH---DNTIMMLHCYESYMLQDTFNVYTY 535 (557)
T ss_pred ccceeEEE---CCEEEEEeeecceeehhhcCcccc
Confidence 33333333 346888999888 5666776655
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=94.08 E-value=5.3 Score=39.13 Aligned_cols=188 Identities=13% Similarity=0.078 Sum_probs=94.6
Q ss_pred eEEEEeCCCCCCeEEEecCCC--cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg--~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
.-.+.|.. ++.++-+.|.-| .|+.+|+.+++... ...+... --=-.++... ++...-.-..+...+||..+-
T Consensus 47 TQGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~--~~~l~~~-~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl- 120 (264)
T PF05096_consen 47 TQGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQ--SVPLPPR-YFGEGITILG-DKLYQLTWKEGTGFVYDPNTL- 120 (264)
T ss_dssp EEEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEE--EEE-TTT---EEEEEEET-TEEEEEESSSSEEEEEETTTT-
T ss_pred CccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEE--EEECCcc-ccceeEEEEC-CEEEEEEecCCeEEEEccccc-
Confidence 44577766 788887776666 68889998876321 1112111 0111122221 222222336788899998863
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l 335 (812)
+++.++.- .++.+.|+ .++ ..|+.++....|+++|+.+-...........+ .-..++.+.|. +|. +.
T Consensus 121 ------~~~~~~~y-~~EGWGLt--~dg-~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~-Iy 188 (264)
T PF05096_consen 121 ------KKIGTFPY-PGEGWGLT--SDG-KRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGK-IY 188 (264)
T ss_dssp ------EEEEEEE--SSS--EEE--ECS-SCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTE-EE
T ss_pred ------eEEEEEec-CCcceEEE--cCC-CEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCE-EE
Confidence 66666654 46888888 445 45555555678999998876532111111111 12345667775 333 55
Q ss_pred EEEECCCeEEEEECCCCCcccc-----eee---c---CCcCCCCeEEEEEcCCCC-EEEEE
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSC-----MLT---L---PNAHTSDVNVISWNRTEP-LIVSG 384 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~-----~~~---~---~~~~~~~v~~l~~~~~~~-~l~sg 384 (812)
|-.-....|...|..++.-... +.. . ......-.+.|+|.|... +++||
T Consensus 189 ANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 189 ANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 5554455555556654321110 000 0 011145689999998877 55555
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=94.06 E-value=4.2 Score=38.31 Aligned_cols=222 Identities=9% Similarity=0.091 Sum_probs=119.3
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC---CcEEEeeCCCceEEeeCCCCCCCCCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK---TALQTVDDPFQLAEHNKKRGKGPGIPTPP 264 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~---~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 264 (812)
.+.++.+--..|.|+-||+.+... ....+.+. ++..+.+--.+ .+.+.++..-.|--||.... ....
T Consensus 26 ~~sLl~VDi~ag~v~r~D~~qn~v---~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~-----~a~v 95 (310)
T KOG4499|consen 26 RQSLLYVDIEAGEVHRYDIEQNKV---YRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSE-----SAKV 95 (310)
T ss_pred cceEEEEEeccCceehhhhhhhhe---EEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEcccccc-----eeee
Confidence 566777666677888898876432 11222221 12333332222 23333344444555764331 1111
Q ss_pred ceEEcC-----CCCcEEEEEecCCCCCEEEEEeC----------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 265 LFSFSG-----HLTEGFAMDWSSTEPGVLATGDC----------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 265 ~~~~~~-----h~~~v~~l~~sp~~~~~l~sg~~----------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
..++.. .......-..+|+| ++ ..|.. .|.++.|-.... ...+...-.--+.++|+.
T Consensus 96 ~~t~~ev~~d~kknR~NDgkvdP~G-ry-y~GtMad~~~~le~~~g~Ly~~~~~h~------v~~i~~~v~IsNgl~Wd~ 167 (310)
T KOG4499|consen 96 YRTLFEVQPDRKKNRLNDGKVDPDG-RY-YGGTMADFGDDLEPIGGELYSWLAGHQ------VELIWNCVGISNGLAWDS 167 (310)
T ss_pred eeeccccCchHHhcccccCccCCCC-ce-eeeeeccccccccccccEEEEeccCCC------ceeeehhccCCccccccc
Confidence 122110 12344556677887 34 33322 233444433221 111222223346789998
Q ss_pred CCCeEEEEEECCCeEEEEEC--CCCCc--ccceeecCCc---CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 330 GEKRVLASCSVDLSIRIWDT--RVINT--KSCMLTLPNA---HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~--~~~~~--~~~~~~~~~~---~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+.+.+.++-+.+-.|.-||. .++.. ...+..+... ....--.++....|++.++.-..|+|...|+. +++
T Consensus 168 d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~---tGK 244 (310)
T KOG4499|consen 168 DAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPT---TGK 244 (310)
T ss_pred cCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCC---CCc
Confidence 88877778888888988884 33221 1222222110 11112234456678888888889999999998 688
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
.+..++-....|++++|--.+-..|.+.
T Consensus 245 ~L~eiklPt~qitsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 245 ILLEIKLPTPQITSCCFGGKNLDILYVT 272 (310)
T ss_pred EEEEEEcCCCceEEEEecCCCccEEEEE
Confidence 8999988899999999974322344443
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=1.1 Score=50.30 Aligned_cols=190 Identities=9% Similarity=0.042 Sum_probs=93.4
Q ss_pred CCCeEEEecCC------CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEEeeCCCCC
Q psy4510 188 EPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF-----QLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~~d------g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~vwd~~~~~ 256 (812)
++.+.+.||.+ ..|..||+.+..-. ....+....... +++ .-+++..+.|+.++ .+..||..+..
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~--~~~~m~~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~ 378 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHV--ELPPMIKNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDK 378 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEe--eCCCCcchhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCe
Confidence 67788888754 34777887665321 122222111111 122 23566667777543 37788877642
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-----------------------cEEEEeCCCCCcceeccc
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-----------------------NIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-----------------------~i~vwd~~~~~~~~~~~~ 313 (812)
...+..+.........+.. ++ .+.+.|+.++ .+..||+.+. .|... .
T Consensus 379 -----W~~~~~mp~~r~~~~~~~~--~g-~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td-~W~~v-~ 448 (557)
T PHA02713 379 -----WKMLPDMPIALSSYGMCVL--DQ-YIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNN-IWETL-P 448 (557)
T ss_pred -----EEECCCCCcccccccEEEE--CC-EEEEEeCCCcccccccccccccccccccccccceEEEECCCCC-eEeec-C
Confidence 1111111111111112222 34 5677776542 4778888775 34432 2
Q ss_pred cccCCCCCEEEEEEcCCCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 314 PLVGHTNSVEDLQWSPGEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
++.........+ .-++. +.+.|+.+ ..+..||..+.+....+..+ .........+.+ ++.+.++||.+
T Consensus 449 ~m~~~r~~~~~~--~~~~~-IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m-~~~r~~~~~~~~--~~~iyv~Gg~~ 522 (557)
T PHA02713 449 NFWTGTIRPGVV--SHKDD-IYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTT-ESRLSALHTILH--DNTIMMLHCYE 522 (557)
T ss_pred CCCcccccCcEE--EECCE-EEEEeCCCCCCccceeEEEecCCCCCCeeEcccc-CcccccceeEEE--CCEEEEEeeec
Confidence 222111111112 22344 67777654 24678998852223333333 222223333333 57788999988
Q ss_pred C--cEEEEecCC
Q psy4510 388 G--CIHVWDLRR 397 (812)
Q Consensus 388 g--~i~iwd~~~ 397 (812)
| .+..||..+
T Consensus 523 ~~~~~e~yd~~~ 534 (557)
T PHA02713 523 SYMLQDTFNVYT 534 (557)
T ss_pred ceeehhhcCccc
Confidence 8 677777763
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.019 Score=63.37 Aligned_cols=140 Identities=15% Similarity=0.082 Sum_probs=91.6
Q ss_pred ecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC--Ccee---------------EE---EEecCCCCEEEeecCCC
Q psy4510 652 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE--AGAW---------------SV---YLYTNRFGVLATGDCKR 711 (812)
Q Consensus 652 ~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~--~~~~---------------~~---~~~s~dg~~lasgs~dg 711 (812)
++|..+.|..++|...+.-.++ -.-|.+.||+++- |++. .+ +-|-++.-++..+..++
T Consensus 128 ~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~ 205 (1283)
T KOG1916|consen 128 AKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGG 205 (1283)
T ss_pred HhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCC
Confidence 5677788888888653322222 3346788888864 3221 11 12345557888899999
Q ss_pred eEEEeecCCCCCcccccccccCCCcceeEeEE-----------ecCCceeEEeeccCCceEEeeecC-c---ceEEEE--
Q psy4510 712 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW-----------SPGEKRVLASCSVDRSNRIGARRD-M---LYCFFV-- 774 (812)
Q Consensus 712 ~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~f-----------s~dg~~~L~s~s~Dg~i~iWd~~~-~---~~~~~~-- 774 (812)
.|++..+.+.. ...+.+|...+++++| ||||+ .+|.+..||.++.|-+.- + .+|...
T Consensus 206 ~i~lL~~~ra~-----~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGt-v~a~a~~dG~v~f~Qiyi~g~~~~rclhewk 279 (1283)
T KOG1916|consen 206 EIRLLNINRAL-----RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGT-VFAWAISDGSVGFYQIYITGKIVHRCLHEWK 279 (1283)
T ss_pred ceeEeeechHH-----HHHHHhcCCCcccHHHHhhchhhheeeCCCCc-EEEEeecCCccceeeeeeeccccHhhhhccC
Confidence 99998877653 4567779888777655 78998 899999999998887631 1 144443
Q ss_pred -eeeeeEEEeeec---chhhhhhhheecc
Q psy4510 775 -SLVHCIFVWLKY---QLFVDVYYWAFVD 799 (812)
Q Consensus 775 -~~~~~~~~w~~~---~~~~~~~~~~~~~ 799 (812)
.+.|..+=|..- ..-+++.||-|+=
T Consensus 280 phd~~p~vC~lc~~~~~~~v~i~~w~~~I 308 (1283)
T KOG1916|consen 280 PHDKHPRVCWLCHKQEILVVSIGKWVLRI 308 (1283)
T ss_pred CCCCCCceeeeeccccccCCccceeEEEE
Confidence 333544445432 3778888998763
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=9.4 Score=39.76 Aligned_cols=158 Identities=11% Similarity=0.038 Sum_probs=86.2
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEE-eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAE-HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~v-wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
...+.++.+.+++.+++++. .|.+.. ++-... ...++ ..+-...++++.+.+++ ..++.| ..|.+.+=.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~-----tW~~~--~~~~~~~l~~i~~~~~g-~~~~vg-~~G~~~~~s 241 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQT-----AWTPH--QRNSSRRLQSMGFQPDG-NLWMLA-RGGQIRFND 241 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCC-----eEEEe--eCCCcccceeeeEcCCC-CEEEEe-cCCEEEEcc
Confidence 45788999999987766554 444332 221110 01111 12234578899999987 555555 457665323
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
...+..|.............+.++.+.|++. +..++.+|.|.. ....+.+...+... ..-....+.+.|..+++.+
T Consensus 242 ~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~--~~~~G~~G~v~~-S~d~G~tW~~~~~~-~~~~~~~~~~~~~~~~~~~ 317 (334)
T PRK13684 242 PDDLESWSKPIIPEITNGYGYLDLAYRTPGE--IWAGGGNGTLLV-SKDGGKTWEKDPVG-EEVPSNFYKIVFLDPEKGF 317 (334)
T ss_pred CCCCCccccccCCccccccceeeEEEcCCCC--EEEEcCCCeEEE-eCCCCCCCeECCcC-CCCCcceEEEEEeCCCceE
Confidence 4455544432222111234578899999776 445556676653 33322222221110 1223467788887766665
Q ss_pred EEEeCCCcEEEEec
Q psy4510 382 VSGGDDGCIHVWDL 395 (812)
Q Consensus 382 ~sg~~dg~i~iwd~ 395 (812)
++ +..|.|-.|+-
T Consensus 318 ~~-G~~G~il~~~~ 330 (334)
T PRK13684 318 VL-GQRGVLLRYVG 330 (334)
T ss_pred EE-CCCceEEEecC
Confidence 54 56788777654
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.88 E-value=7.1 Score=38.31 Aligned_cols=159 Identities=8% Similarity=-0.016 Sum_probs=93.7
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 351 (812)
.+-+..+.++. .+...+..+.-++|.|+.+...... ...+. -.+.-.++. -.|+ ....+..|.-+.+.|+..
T Consensus 86 ~~l~~Dv~vse---~yvyvad~ssGL~IvDIS~P~sP~~-~~~ln-t~gyaygv~--vsGn-~aYVadlddgfLivdvsd 157 (370)
T COG5276 86 RDLFADVRVSE---EYVYVADWSSGLRIVDISTPDSPTL-IGFLN-TDGYAYGVY--VSGN-YAYVADLDDGFLIVDVSD 157 (370)
T ss_pred hhhhheeEecc---cEEEEEcCCCceEEEeccCCCCcce-ecccc-CCceEEEEE--ecCC-EEEEeeccCcEEEEECCC
Confidence 34456677765 4666677778899999998864221 11111 113333433 3466 456666566677889987
Q ss_pred CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE
Q psy4510 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 352 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
.......... .........++.+ |++...+..|+-+.|.|+.+......+.... ....+.++..+++. -+++. .
T Consensus 158 pssP~lagry-a~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-~g~g~~sv~vsdnr-~y~vv-y 231 (370)
T COG5276 158 PSSPQLAGRY-ALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-TGPGTYSVSVSDNR-AYLVV-Y 231 (370)
T ss_pred CCCceeeeee-ccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-cCCceEEEEecCCe-eEEEE-c
Confidence 6544433333 2333334455555 6677777789999999998744333332222 23378888888763 23333 3
Q ss_pred CCCCEEEEEcCCCC
Q psy4510 432 ADDQIALWDLAVER 445 (812)
Q Consensus 432 ~dg~v~iwd~~~~~ 445 (812)
. --+.+-|....+
T Consensus 232 ~-egvlivd~s~~s 244 (370)
T COG5276 232 D-EGVLIVDVSGPS 244 (370)
T ss_pred c-cceEEEecCCCC
Confidence 3 347777877664
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=93.82 E-value=1.1 Score=51.81 Aligned_cols=147 Identities=14% Similarity=0.077 Sum_probs=96.0
Q ss_pred ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee---eecCCCCceEEEEe
Q psy4510 588 GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF---SFSGHLTEGFAMDW 664 (812)
Q Consensus 588 ~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gh~~~V~~l~~ 664 (812)
-.+..+...+|+...++...+.+-.|..||+..-....-. ...+++ +......-+.++.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~-----------------~~~pl~~s~ts~ek~vf~~~~~w 163 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYE-----------------TTVPLKNSATSFEKPVFQLKNVW 163 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhh-----------------hccccccccchhccccccccccc
Confidence 3566777788877666554355557999999876522100 001111 11222245678889
Q ss_pred CCCCCCeEEecCCCceEEEEecCC----------CceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC
Q psy4510 665 SSTEPGVLATGDCKRNIHIWTPRE----------AGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 734 (812)
Q Consensus 665 sp~~~~~las~s~Dg~v~iWd~~~----------~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH 734 (812)
.|.=....|....|+.|++..+.- +...++++++|.|+.++.|...|++.=|...-..... +-+.-..-
T Consensus 164 nP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~-ip~Pp~~e 242 (1405)
T KOG3630|consen 164 NPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSE-IPEPPVEE 242 (1405)
T ss_pred cCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeec-ccCCCcCC
Confidence 986566788888999999987753 4566788899999999999999999988764331100 11111112
Q ss_pred CcceeEeEEecCCceeEEe
Q psy4510 735 TNSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 735 ~~~V~~l~fs~dg~~~L~s 753 (812)
...|.+|+|...-. +|+.
T Consensus 243 ~yrvl~v~Wl~t~e-flvv 260 (1405)
T KOG3630|consen 243 NYRVLSVTWLSTQE-FLVV 260 (1405)
T ss_pred CcceeEEEEeccee-EEEE
Confidence 57899999988777 4554
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.21 Score=33.04 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=27.6
Q ss_pred CceEEEEeCCCCC--CeEEEecCCCcEEEEccCC
Q psy4510 177 TEGFAMDWSSTEP--GVLATGDCKRNIHIWTPRE 208 (812)
Q Consensus 177 ~~i~~~~~sp~~~--~~lat~~~dg~v~iwd~~~ 208 (812)
+.|.++.|||..+ ++||.+-..|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999998566 6999998899999999875
|
It contains a characteristic DLL sequence motif. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=93.70 E-value=1.3 Score=47.03 Aligned_cols=110 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred CceEEEEeCCCCCCeEEEec-----------CCC-cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGD-----------CKR-NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~-----------~dg-~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
.....|+|.+ +|+++++-. ..+ .|.+++-..+.-.......+.........|++.+++ |..++..
T Consensus 14 ~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP 90 (367)
T ss_pred CCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCC
Confidence 3456788999 888877642 223 677775433211111122333333456789998988 4444444
Q ss_pred CceEEeeCCCCCCCCCCCCCceE-EcC----CCCcEEEEEecCCCCCEEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFS-FSG----HLTEGFAMDWSSTEPGVLAT 290 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~-~~~----h~~~v~~l~~sp~~~~~l~s 290 (812)
...++.+...........+.+.. +.. +......++|.|+| .+.++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG-~LYv~ 140 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDG-WLYFN 140 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCC-CEEEe
Confidence 43344444332100001111211 222 23447789999998 44443
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=93.41 E-value=2.5 Score=43.80 Aligned_cols=152 Identities=10% Similarity=0.054 Sum_probs=92.6
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 312 (812)
+|.+.++.+-..|.+.=|-++... ..-|+..-....++|.++.||+|. ..||+--.+.+|.+++...........
T Consensus 31 DDaNkqlfavrSggatgvvvkgpn----dDVpiSfdm~d~G~I~SIkFSlDn-kilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 31 DDANKQLFAVRSGGATGVVVKGPN----DDVPISFDMDDKGEIKSIKFSLDN-KILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred ccCcceEEEEecCCeeEEEEeCCC----CCCCceeeecCCCceeEEEeccCc-ceEEEEecCceEEEEecCCCchhhHHH
Confidence 333333344445555566655431 123333334456799999999998 789999999999999985544322223
Q ss_pred ccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcE
Q psy4510 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCI 390 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i 390 (812)
...+..+..|...+|+.+-. +|..+..| +-+|-+.. ....++.. ..|...|+-..|.++.+ +|+++-..+++
T Consensus 106 ~~ck~k~~~IlGF~W~~s~e--~A~i~~~G-~e~y~v~p--ekrslRlV-ks~~~nvnWy~yc~et~v~LL~t~~~~n~l 179 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSSTE--IAFITDQG-IEFYQVLP--EKRSLRLV-KSHNLNVNWYMYCPETAVILLSTTVLENVL 179 (657)
T ss_pred HHhccCcceeEEEEEecCee--EEEEecCC-eEEEEEch--hhhhhhhh-hhcccCccEEEEccccceEeeecccccccc
Confidence 33344455799999988754 55555433 56665542 22333444 67888999999999888 33443234444
Q ss_pred EEEec
Q psy4510 391 HVWDL 395 (812)
Q Consensus 391 ~iwd~ 395 (812)
.=+-+
T Consensus 180 npf~~ 184 (657)
T KOG2377|consen 180 NPFHF 184 (657)
T ss_pred ccEEE
Confidence 33333
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=93.41 E-value=3.4 Score=43.43 Aligned_cols=146 Identities=11% Similarity=0.068 Sum_probs=86.8
Q ss_pred EEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe------EEEEEECCCeEEEEECCCCCcccceee
Q psy4510 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR------VLASCSVDLSIRIWDTRVINTKSCMLT 360 (812)
Q Consensus 287 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~------~l~s~~~dg~i~iwd~~~~~~~~~~~~ 360 (812)
++..|+....++-.|+..++ ......-|... -++|.|..+. --+.|-.+..|.-.|.|....+-.+..
T Consensus 482 i~~dg~~~~kLykmDIErGk----vveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e 555 (776)
T COG5167 482 IYLDGGERDKLYKMDIERGK----VVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE 555 (776)
T ss_pred EEecCCCcccceeeecccce----eeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence 45556666677777777776 33444444433 5667664320 123444555666667775332111111
Q ss_pred c-CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 361 L-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 361 ~-~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
. ........+|..-...| ++|+|+..|-|++||.-. .+.-..+++....|..|..+.+|..+|++|- ..+.+-
T Consensus 556 sKdY~tKn~Fss~~tTesG-yIa~as~kGDirLyDRig---~rAKtalP~lG~aIk~idvta~Gk~ilaTCk--~yllL~ 629 (776)
T COG5167 556 SKDYKTKNKFSSGMTTESG-YIAAASRKGDIRLYDRIG---KRAKTALPGLGDAIKHIDVTANGKHILATCK--NYLLLT 629 (776)
T ss_pred ehhccccccccccccccCc-eEEEecCCCceeeehhhc---chhhhcCcccccceeeeEeecCCcEEEEeec--ceEEEE
Confidence 1 01122333444333333 999999999999999752 3344456777889999999999876666654 578888
Q ss_pred EcCCC
Q psy4510 440 DLAVE 444 (812)
Q Consensus 440 d~~~~ 444 (812)
|+.-.
T Consensus 630 d~~ik 634 (776)
T COG5167 630 DVPIK 634 (776)
T ss_pred ecccc
Confidence 87654
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.36 E-value=9.6 Score=42.50 Aligned_cols=51 Identities=14% Similarity=0.328 Sum_probs=41.9
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
-.|+||+. .++.+..+....+.+..+.|+.+. -|++-..+|++.+|++...
T Consensus 64 ~~I~If~~----sG~lL~~~~w~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~~ge 114 (829)
T KOG2280|consen 64 PYIRIFNI----SGQLLGRILWKHGELIGMGWSDDE--ELICVQKDGTVHVYGLLGE 114 (829)
T ss_pred eeEEEEec----cccchHHHHhcCCCeeeecccCCc--eEEEEeccceEEEeecchh
Confidence 45888888 578888777666789999999874 5788889999999999765
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=93.15 E-value=11 Score=38.26 Aligned_cols=156 Identities=12% Similarity=0.157 Sum_probs=76.2
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
..-.+.+..+.-++++ .+++++..-....-|+.-.. .|... -......|..|.|.|++. +.+ ....|.|++=+
T Consensus 141 ~~~~gs~~~~~r~~dG-~~vavs~~G~~~~s~~~G~~-~w~~~---~r~~~~riq~~gf~~~~~-lw~-~~~Gg~~~~s~ 213 (302)
T PF14870_consen 141 SETSGSINDITRSSDG-RYVAVSSRGNFYSSWDPGQT-TWQPH---NRNSSRRIQSMGFSPDGN-LWM-LARGGQIQFSD 213 (302)
T ss_dssp -S----EEEEEE-TTS--EEEEETTSSEEEEE-TT-S-S-EEE---E--SSS-EEEEEE-TTS--EEE-EETTTEEEEEE
T ss_pred cCCcceeEeEEECCCC-cEEEEECcccEEEEecCCCc-cceEE---ccCccceehhceecCCCC-EEE-EeCCcEEEEcc
Confidence 3445678888899998 67777766444556775432 22221 122457899999999987 334 44889998887
Q ss_pred CC-CCCcccc-eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCCCEEEEEEccCC
Q psy4510 349 TR-VINTKSC-MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTAPVTTVEWHPTE 423 (812)
Q Consensus 349 ~~-~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~ 423 (812)
.. ....-.. +... ....-.+..++|.+++...++|+.. .+ +.... .++.-...+ .-...++.|.|.+.+
T Consensus 214 ~~~~~~~w~~~~~~~-~~~~~~~ld~a~~~~~~~wa~gg~G-~l-~~S~D---gGktW~~~~~~~~~~~n~~~i~f~~~~ 287 (302)
T PF14870_consen 214 DPDDGETWSEPIIPI-KTNGYGILDLAYRPPNEIWAVGGSG-TL-LVSTD---GGKTWQKDRVGENVPSNLYRIVFVNPD 287 (302)
T ss_dssp -TTEEEEE---B-TT-SS--S-EEEEEESSSS-EEEEESTT--E-EEESS---TTSS-EE-GGGTTSSS---EEEEEETT
T ss_pred CCCCccccccccCCc-ccCceeeEEEEecCCCCEEEEeCCc-cE-EEeCC---CCccceECccccCCCCceEEEEEcCCC
Confidence 22 1111111 1111 2233458899999988888877654 33 33333 233333322 234568889997653
Q ss_pred CcEEEEEECCCCEEEE
Q psy4510 424 SSTFASGGADDQIALW 439 (812)
Q Consensus 424 ~~~l~s~~~dg~v~iw 439 (812)
.-.+-+.+|.|.-|
T Consensus 288 --~gf~lG~~G~ll~~ 301 (302)
T PF14870_consen 288 --KGFVLGQDGVLLRY 301 (302)
T ss_dssp --EEEEE-STTEEEEE
T ss_pred --ceEEECCCcEEEEe
Confidence 34445667876554
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.13 E-value=20 Score=41.31 Aligned_cols=82 Identities=12% Similarity=0.134 Sum_probs=51.8
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC----------Ccceec------cccc-cCCCCCEEEEEEcCCC--Ce
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA----------GAWQVD------QKPL-VGHTNSVEDLQWSPGE--KR 333 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~----------~~~~~~------~~~~-~~h~~~v~~~~~~p~~--~~ 333 (812)
-.|..+..||+| .+|+..|..| |.|-.+... .....+ ...+ ..+...|..+.|+|.+ ..
T Consensus 85 f~v~~i~~n~~g-~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 85 FEVHQISLNPTG-SLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred eeEEEEEECCCC-CEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 478899999999 6777666645 555444321 110000 1111 2345689999999974 22
Q ss_pred EEEEEECCCeEEEEECCCCCccc
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
.|+.-..|+++|+||+.......
T Consensus 163 ~l~vLtsdn~lR~y~~~~~~~p~ 185 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISDPQHPW 185 (717)
T ss_pred eEEEEecCCEEEEEecCCCCCCe
Confidence 47778889999999997544433
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=93.05 E-value=12 Score=41.70 Aligned_cols=180 Identities=11% Similarity=0.105 Sum_probs=92.7
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.-.|+|++... .++..+.-..+.+..+.|+.+. .|++-..+|++++|++....... ....+......|.
T Consensus 63 ~~~I~If~~sG--------~lL~~~~w~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~~ge~ie~-~svg~e~~~~~I~ 131 (829)
T KOG2280|consen 63 RPYIRIFNISG--------QLLGRILWKHGELIGMGWSDDE--ELICVQKDGTVHVYGLLGEFIES-NSVGFESQMSDIV 131 (829)
T ss_pred ceeEEEEeccc--------cchHHHHhcCCCeeeecccCCc--eEEEEeccceEEEeecchhhhcc-cccccccccCcee
Confidence 34578888765 5555554445588899999884 77888899999999986543100 0011122333455
Q ss_pred EEEEcCCCCeEEEEEECCCeE-EEEECCCCCcccceeecCCcCCCCe--EEEEEcCCC-C--EEEEEe-CCCcEEEEecC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSI-RIWDTRVINTKSCMLTLPNAHTSDV--NVISWNRTE-P--LIVSGG-DDGCIHVWDLR 396 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i-~iwd~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~~-~--~l~sg~-~dg~i~iwd~~ 396 (812)
.+.+..+| +.+- ..+|.+ .+-+.... .+.+.+....... +|-+..+.+ + .++-.. ..| ..++-..
T Consensus 132 ec~~f~~G--Vavl-t~~g~v~~i~~~~~~----~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~ 203 (829)
T KOG2280|consen 132 ECRFFHNG--VAVL-TVSGQVILINGVEEP----KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVE 203 (829)
T ss_pred EEEEecCc--eEEE-ecCCcEEEEcCCCcc----hhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hccccee
Confidence 55555555 3333 333444 44443321 1222211111111 222222222 1 111111 111 1122111
Q ss_pred CCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
. .......+......+..+..+|+. ++|+--...|.|.+-.....+
T Consensus 204 ~--~~~q~~~~~~~~~~~~ki~VS~n~-~~laLyt~~G~i~~vs~D~~~ 249 (829)
T KOG2280|consen 204 E--SRVQLHALSWPNSSVVKISVSPNR-RFLALYTETGKIWVVSIDLSQ 249 (829)
T ss_pred c--ccccccccCCCCceEEEEEEcCCc-ceEEEEecCCcEEEEecchhh
Confidence 1 112223333334668889999986 689988999999888776653
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=92.99 E-value=18 Score=40.35 Aligned_cols=72 Identities=8% Similarity=0.095 Sum_probs=43.3
Q ss_pred ceEEEEecCCCceeE-EE--------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcce-eEeEEecCCc
Q psy4510 679 RNIHIWTPREAGAWS-VY--------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV-EDLQWSPGEK 748 (812)
Q Consensus 679 g~v~iWd~~~~~~~~-~~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V-~~l~fs~dg~ 748 (812)
|.|.-+|+.+|++.= .. ...-.+.+++.++.+|.++.+|.++|+. +-...-..... .=+.|.-+|+
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~----lw~~~~g~~~~a~P~ty~~~G~ 516 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEE----LWKFKTGSGIVGPPVTYEQDGK 516 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCE----eEEEeCCCCceecCEEEEeCCE
Confidence 567788888876532 11 1223556788888899999999999985 21111111111 1245556888
Q ss_pred eeEEee
Q psy4510 749 RVLASC 754 (812)
Q Consensus 749 ~~L~s~ 754 (812)
+|++..
T Consensus 517 qYv~~~ 522 (527)
T TIGR03075 517 QYVAVL 522 (527)
T ss_pred EEEEEE
Confidence 766644
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=92.98 E-value=2.7 Score=44.14 Aligned_cols=59 Identities=19% Similarity=0.361 Sum_probs=47.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
+++|.|+..|-|++||--... ....+.+....|-.+..+.+|+.+|++|- ..+.+-|++
T Consensus 574 GyIa~as~kGDirLyDRig~r----AKtalP~lG~aIk~idvta~Gk~ilaTCk--~yllL~d~~ 632 (776)
T COG5167 574 GYIAAASRKGDIRLYDRIGKR----AKTALPGLGDAIKHIDVTANGKHILATCK--NYLLLTDVP 632 (776)
T ss_pred ceEEEecCCCceeeehhhcch----hhhcCcccccceeeeEeecCCcEEEEeec--ceEEEEecc
Confidence 799999999999999965444 34456677889999999999998777764 678888876
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=92.78 E-value=4.9 Score=45.34 Aligned_cols=153 Identities=10% Similarity=0.174 Sum_probs=92.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceec--cccc------c----------CCCCCEEEEEEcC-CCCeEEEEEECCCeEEE
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVD--QKPL------V----------GHTNSVEDLQWSP-GEKRVLASCSVDLSIRI 346 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~--~~~~------~----------~h~~~v~~~~~~p-~~~~~l~s~~~dg~i~i 346 (812)
.+|+.+. .+.|.||++......... ...+ . .....|+.|.... .+..+|+.|.+||.|.+
T Consensus 50 n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~~ 128 (717)
T PF08728_consen 50 NLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVLA 128 (717)
T ss_pred CEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEEE
Confidence 5666655 588999998654321000 0000 0 0112345554433 23348999999999999
Q ss_pred EECCCC-----------Cc------ccceeecCCcCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 347 WDTRVI-----------NT------KSCMLTLPNAHTSDVNVISWN--RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 347 wd~~~~-----------~~------~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
|.+..- .. ..+...+ .-...+.+++++ ...++||+++....|.||-............-
T Consensus 129 Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~--~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s 206 (717)
T PF08728_consen 129 YYTETIIEAIERFSEDNDSGFSRLKIKPFFHL--RVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS 206 (717)
T ss_pred EEHHHHHHHHHhhccccccccccccCCCCeEe--ecCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence 976310 00 0111111 234578889998 77789999999999998876532111111112
Q ss_pred ccCCCCEEEEEEccCC--Cc---EEEEEECCCCEEEEEc
Q psy4510 408 KHHTAPVTTVEWHPTE--SS---TFASGGADDQIALWDL 441 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~--~~---~l~s~~~dg~v~iwd~ 441 (812)
..|...|.+|+|.++. +. .+++++-.|.+.+|++
T Consensus 207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 2367789999998764 22 6778888999999888
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.66 E-value=11 Score=37.03 Aligned_cols=163 Identities=9% Similarity=0.015 Sum_probs=106.0
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
-.+.+.++.++.+ ....+..+.-++|.|+.++.....+..+.. .+--.++.. .|++...+.-+.-+.+.|+..
T Consensus 85 ~~~l~~Dv~vse~---yvyvad~ssGL~IvDIS~P~sP~~~~~lnt--~gyaygv~v--sGn~aYVadlddgfLivdvsd 157 (370)
T COG5276 85 ARDLFADVRVSEE---YVYVADWSSGLRIVDISTPDSPTLIGFLNT--DGYAYGVYV--SGNYAYVADLDDGFLIVDVSD 157 (370)
T ss_pred hhhhhheeEeccc---EEEEEcCCCceEEEeccCCCCcceeccccC--CceEEEEEe--cCCEEEEeeccCcEEEEECCC
Confidence 3456777888754 355666778899999998765554443321 133344443 488888888666688899988
Q ss_pred CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeEE
Q psy4510 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKEL 476 (812)
Q Consensus 398 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~ 476 (812)
....+...++......-..++.+- ++-..+..|+-+.+-|++.... +.+..+.... .+.++
T Consensus 158 pssP~lagrya~~~~d~~~v~ISG---n~AYvA~~d~GL~ivDVSnp~s---------------Pvli~~~n~g~g~~sv 219 (370)
T COG5276 158 PSSPQLAGRYALPGGDTHDVAISG---NYAYVAWRDGGLTIVDVSNPHS---------------PVLIGSYNTGPGTYSV 219 (370)
T ss_pred CCCceeeeeeccCCCCceeEEEec---CeEEEEEeCCCeEEEEccCCCC---------------CeEEEEEecCCceEEE
Confidence 665555556665555556777773 4666777888899999988754 3333333333 67888
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQL 507 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (812)
..+++ ...++....++.+.+......+.+
T Consensus 220 ~vsdn--r~y~vvy~egvlivd~s~~ssp~~ 248 (370)
T COG5276 220 SVSDN--RAYLVVYDEGVLIVDVSGPSSPTV 248 (370)
T ss_pred EecCC--eeEEEEcccceEEEecCCCCCceE
Confidence 88887 666777777776665544443333
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=92.49 E-value=25 Score=40.74 Aligned_cols=198 Identities=6% Similarity=0.034 Sum_probs=100.1
Q ss_pred CCeeeeeEcCCCCcEEEeeC-C----CceEEeeCCCCCCCCCCCCCc-eEEcCCCCcEEEEEecCCCCCEEEEEeCC---
Q psy4510 224 NSAEDLQWSDLKTALQTVDD-P----FQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGDCK--- 294 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~-d----~~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--- 294 (812)
-.+..+.+||++++|+.+.. + ..|++-++.++ ..+ ..+.+ .. ..++|++++..++.+...+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg-------~~l~~~i~~-~~--~~~~w~~D~~~~~y~~~~~~~~ 196 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETG-------NWYPELLDN-VE--PSFVWANDSWTFYYVRKHPVTL 196 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCC-------CCCCccccC-cc--eEEEEeeCCCEEEEEEecCCCC
Confidence 34667889999998876542 2 34888888775 211 11211 11 4699999985566655432
Q ss_pred --CcEEEEeCCCCCcceeccccccCCCCCEE-EEEEcCCCCeEEEEEEC--CCeEEEEECCCCCcc-cceeecCCcCCCC
Q psy4510 295 --RNIHIWTPREAGAWQVDQKPLVGHTNSVE-DLQWSPGEKRVLASCSV--DLSIRIWDTRVINTK-SCMLTLPNAHTSD 368 (812)
Q Consensus 295 --g~i~vwd~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~-~~~~~~~~~~~~~ 368 (812)
..|+.+++.++.... ...+........ .+..+.+++.+++.+.. ++.+.+++....... .++.. ......
T Consensus 197 ~~~~v~~h~lgt~~~~d--~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~ 272 (686)
T PRK10115 197 LPYQVWRHTIGTPASQD--ELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLP--RRKDHE 272 (686)
T ss_pred CCCEEEEEECCCChhHC--eEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEE--CCCCCE
Confidence 367788888773211 122222222233 33334477765544433 457888886432111 11211 111222
Q ss_pred eEEEEEcCCCCEEEEEeC-CC--cEEEEecCCCCCCCceEEcccC-C-CCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 369 VNVISWNRTEPLIVSGGD-DG--CIHVWDLRRFKKGSSVATFKHH-T-APVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~h-~-~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.... +..+.+++.... .. .|...++.. .. ....+..+ . ..|..+.+.. ..++++...++.-+++-+.
T Consensus 273 ~~~~--~~~~~ly~~tn~~~~~~~l~~~~~~~--~~-~~~~l~~~~~~~~i~~~~~~~--~~l~~~~~~~g~~~l~~~~ 344 (686)
T PRK10115 273 YSLD--HYQHRFYLRSNRHGKNFGLYRTRVRD--EQ-QWEELIPPRENIMLEGFTLFT--DWLVVEERQRGLTSLRQIN 344 (686)
T ss_pred EEEE--eCCCEEEEEEcCCCCCceEEEecCCC--cc-cCeEEECCCCCCEEEEEEEEC--CEEEEEEEeCCEEEEEEEc
Confidence 2222 222333322221 22 343344432 12 22333334 3 3678888873 3577777777766666554
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=92.45 E-value=6.1 Score=44.42 Aligned_cols=191 Identities=13% Similarity=0.156 Sum_probs=98.6
Q ss_pred CCCCcEEEeeCC------CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC------CcEEEE
Q psy4510 233 DLKTALQTVDDP------FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------RNIHIW 300 (812)
Q Consensus 233 ~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g~i~vw 300 (812)
..+..++.|+.. ..+..+|..++ .......+.. .....+++...+ .+.++|+.+ .++..|
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~-----~w~~~a~m~~-~r~~~~~~~~~~--~lYv~GG~~~~~~~l~~ve~Y 354 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTN-----EWSSLAPMPS-PRCRVGVAVLNG--KLYVVGGYDSGSDRLSSVERY 354 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcC-----cEeecCCCCc-ccccccEEEECC--EEEEEccccCCCcccceEEEe
Confidence 334555666655 34677777765 1222222221 222345555543 688899988 367788
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe-----EEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS-----IRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
|..... |.. ..++............ +|. +.|+|+.||. |-.||.++.. ...+... .........+.+
T Consensus 355 D~~~~~-W~~-~a~M~~~R~~~~v~~l--~g~-iYavGG~dg~~~l~svE~YDp~~~~-W~~va~m-~~~r~~~gv~~~- 426 (571)
T KOG4441|consen 355 DPRTNQ-WTP-VAPMNTKRSDFGVAVL--DGK-LYAVGGFDGEKSLNSVECYDPVTNK-WTPVAPM-LTRRSGHGVAVL- 426 (571)
T ss_pred cCCCCc-eec-cCCccCccccceeEEE--CCE-EEEEeccccccccccEEEecCCCCc-ccccCCC-CcceeeeEEEEE-
Confidence 888765 554 3333322222222221 344 8899998874 6778877432 1112212 111222222332
Q ss_pred CCCCEEEEEeCCC------cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCC-----EEEEEcCCC
Q psy4510 376 RTEPLIVSGGDDG------CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ-----IALWDLAVE 444 (812)
Q Consensus 376 ~~~~~l~sg~~dg------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~-----v~iwd~~~~ 444 (812)
+|.+.++||.++ ++..||..+.. ...+..+..-..... ++.. +..+.+.||.|+. |..||..+.
T Consensus 427 -~g~iYi~GG~~~~~~~l~sve~YDP~t~~-W~~~~~M~~~R~~~g-~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~~~ 501 (571)
T KOG4441|consen 427 -GGKLYIIGGGDGSSNCLNSVECYDPETNT-WTLIAPMNTRRSGFG-VAVL--NGKIYVVGGFDGTSALSSVERYDPETN 501 (571)
T ss_pred -CCEEEEEcCcCCCccccceEEEEcCCCCc-eeecCCcccccccce-EEEE--CCEEEEECCccCCCccceEEEEcCCCC
Confidence 477888888654 46778876421 222222222222222 3332 2368888887763 666777665
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=92.31 E-value=29 Score=40.96 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC-CcccceeecCCcCC----------CCeEEEEEcCCCCEEEEEeCCC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI-NTKSCMLTLPNAHT----------SDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~----------~~v~~l~~~~~~~~l~sg~~dg 388 (812)
.+..+++|+|.....||.....|...||++... ............+. ..-..|.|.++.+.|+.++. .
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-S 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-C
Confidence 467899999988778999999999999999211 11111111111111 23347889888777777665 4
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+.++|+........ .........|..+.-+|.+..+++.-+. ..|...++...
T Consensus 225 ~l~~~d~~~~~~~~~-l~~~~~~~~IlDv~~~~~~~~~~FiLTs-~eiiw~~~~~~ 278 (765)
T PF10214_consen 225 KLMLIDFESNWQTEY-LVTAKTWSWILDVKRSPDNPSHVFILTS-KEIIWLDVKSS 278 (765)
T ss_pred ceEEEECCCCCccch-hccCCChhheeeEEecCCccceEEEEec-CeEEEEEccCC
Confidence 689999985322111 2223345678999988874444443332 56888888764
|
These proteins are found in fungi. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=92.30 E-value=1.9 Score=47.93 Aligned_cols=115 Identities=15% Similarity=0.195 Sum_probs=68.5
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEec--CCCCCEEEEEeCCCcEEEEeCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS--STEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--p~~~~~l~sg~~dg~i~vwd~~ 303 (812)
.+-+.-|..++..++-+....+.|||...+ ....-..+ ...+.|..++|. |++ ..+++.+..+.|.++.-.
T Consensus 32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~-----~lE~~~~f-~~~~~I~dLDWtst~d~-qsiLaVGf~~~v~l~~Q~ 104 (631)
T PF12234_consen 32 PSLISGSSIKKIAVVDSSRSELTIWDTRSG-----VLEYEESF-SEDDPIRDLDWTSTPDG-QSILAVGFPHHVLLYTQL 104 (631)
T ss_pred cceEeecccCcEEEEECCCCEEEEEEcCCc-----EEEEeeee-cCCCceeeceeeecCCC-CEEEEEEcCcEEEEEEcc
Confidence 333444455554444445667999999875 11122223 456789999996 566 455556667889988542
Q ss_pred ------CCCcceec-cccccCCC-CCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 304 ------EAGAWQVD-QKPLVGHT-NSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 304 ------~~~~~~~~-~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
.+..|... ...+..|+ .+|.+..|.++|. |+.|+ ...+.|+|-.
T Consensus 105 R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~--LvV~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 105 RYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGT--LVVGS-GNQLFVFDKW 156 (631)
T ss_pred chhhhcCCcccceeEEEEeecCCCCCccceeEecCCe--EEEEe-CCEEEEECCC
Confidence 11112211 11233444 5799999999996 44444 3678888754
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=91.80 E-value=0.81 Score=30.33 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=27.1
Q ss_pred CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCC
Q psy4510 320 NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRV 351 (812)
Q Consensus 320 ~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~ 351 (812)
+.|.++.|+|... .+|+.+-.-|.|.|+|+|+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999997554 5888888899999999994
|
It contains a characteristic DLL sequence motif. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=91.52 E-value=4.8 Score=41.83 Aligned_cols=145 Identities=12% Similarity=0.132 Sum_probs=89.9
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
..|.+.-|-+...+. .+....-....++|.++.|++|.+ ++|.--.+++|.+++....+.........+.....|...
T Consensus 41 rSggatgvvvkgpnd-DVpiSfdm~d~G~I~SIkFSlDnk-ilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF 118 (657)
T KOG2377|consen 41 RSGGATGVVVKGPND-DVPISFDMDDKGEIKSIKFSLDNK-ILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGF 118 (657)
T ss_pred ecCCeeEEEEeCCCC-CCCceeeecCCCceeEEEeccCcc-eEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEE
Confidence 346667776655442 222222233567999999999998 799999999999998743222221111113344568889
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAV 443 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~ 443 (812)
.|+.+ .-+|.-...| +-+|-... ..+.+...+.|...|.--.|.++-.-.|++.+ ..+++.=+-++.
T Consensus 119 ~W~~s-~e~A~i~~~G-~e~y~v~p--ekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~ 186 (657)
T KOG2377|consen 119 CWTSS-TEIAFITDQG-IEFYQVLP--EKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA 186 (657)
T ss_pred EEecC-eeEEEEecCC-eEEEEEch--hhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence 99876 4455444444 67776654 34566777888899999999997543444444 334444444433
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=91.31 E-value=21 Score=37.34 Aligned_cols=200 Identities=14% Similarity=0.048 Sum_probs=110.2
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEec----CCCCCE-EEEEe-CC---CcEEEEeCC
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS----STEPGV-LATGD-CK---RNIHIWTPR 303 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s----p~~~~~-l~sg~-~d---g~i~vwd~~ 303 (812)
|...+++.....+-+.+||++. +.+..+. .+..+.+..- -.+... |+.++ .+ .+|++|.+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~G--------k~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id 135 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDG--------KELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRID 135 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS---------EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEE
T ss_pred cccceEEEEeCCCCEEEEcCCC--------cEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEec
Confidence 5556777778889999999987 5555553 2333333321 123222 44444 32 469999886
Q ss_pred CCCcceecc----ccccCCCCCEEEEEE--cC-CCCeEEEEEECCCeEEEEECCCCCcc----cceeecCCcCCCCeEEE
Q psy4510 304 EAGAWQVDQ----KPLVGHTNSVEDLQW--SP-GEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 304 ~~~~~~~~~----~~~~~h~~~v~~~~~--~p-~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~v~~l 372 (812)
......... .++......+..+|+ +| ++..+++....+|.+.-|.+...... ..++.+ .-.+.+..|
T Consensus 136 ~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f--~~~sQ~EGC 213 (381)
T PF02333_consen 136 PDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREF--KVGSQPEGC 213 (381)
T ss_dssp TTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEE--E-SS-EEEE
T ss_pred CCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEe--cCCCcceEE
Confidence 432111101 111122234677776 33 46656777888999988877532222 334555 224578888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCC--CCceEEccc--CCCCEEEEEEcc--CCCcEEEEEE-CCCCEEEEEcCCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKK--GSSVATFKH--HTAPVTTVEWHP--TESSTFASGG-ADDQIALWDLAVE 444 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~--h~~~v~~v~~~p--~~~~~l~s~~-~dg~v~iwd~~~~ 444 (812)
........|+.|-.+.-|.-|+...... +..+....+ ....|-.|+.-. ++..+|++++ .+++..+|+....
T Consensus 214 VVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 214 VVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 8888777999999998888888763221 222323322 456788888753 3434555444 4778999998754
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=91.14 E-value=0.1 Score=54.03 Aligned_cols=237 Identities=13% Similarity=0.145 Sum_probs=135.5
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEE-eeCCCceEEeeCCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQT-VDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s-~~~d~~i~vwd~~~~~~~ 258 (812)
....|-| .+.-++.++.+-.|..||-.... ..-...++....++|..++..++. +...+.+.+|++.+..
T Consensus 38 i~~~w~~-e~~nlavaca~tiv~~YD~agq~------~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~ey-- 108 (615)
T KOG2247|consen 38 IIHRWRP-EGHNLAVACANTIVIYYDKAGQV------ILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY-- 108 (615)
T ss_pred ceeeEec-CCCceehhhhhhHHHhhhhhcce------ecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhh--
Confidence 3456778 55558888778889999755422 122233455667888888876654 4578899999998741
Q ss_pred CCCCCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 259 GIPTPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 259 ~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.....+.+ |... -+.|++.. ..++.|...|.+.|++....+. ....-.|...+.+++|.+.+. .+.
T Consensus 109 ----tqqLE~gg~~s~s--ll~wsKg~-~el~ig~~~gn~viynhgtsR~----iiv~Gkh~RRgtq~av~lEd~--vil 175 (615)
T KOG2247|consen 109 ----TQQLESGGTSSKS--LLAWSKGT-PELVIGNNAGNIVIYNHGTSRR----IIVMGKHQRRGTQIAVTLEDY--VIL 175 (615)
T ss_pred ----HHHHhccCcchHH--HHhhccCC-ccccccccccceEEEeccchhh----hhhhcccccceeEEEecccce--eee
Confidence 21122222 2222 37899877 6788888999999999887762 333333999999999999885 667
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCC--CeEEE---EEcCCCCEEEEEeCCCcEEE--EecCCCCCCCceEEcccC
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTS--DVNVI---SWNRTEPLIVSGGDDGCIHV--WDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~v~~l---~~~~~~~~l~sg~~dg~i~i--wd~~~~~~~~~~~~~~~h 410 (812)
++.|..+.+-...+. ...+... .+... ...++ .|...|..+.+.-. |.+++ -.+........+ .++..
T Consensus 176 ~dcd~~L~v~~qege--ta~ltev-ggepdnm~~~y~k~n~w~kage~m~sVvs-gKkhl~yak~nE~D~pval-~fq~~ 250 (615)
T KOG2247|consen 176 CDCDNTLSVTTQEGE--TASLTEV-GGEPDNMDFFYGKVNGWGKAGETMVSVVS-GKKHLMYAKYNELDEPVAL-QFQEK 250 (615)
T ss_pred cCcHHHHHHhhhccc--eeeeeec-cCccchhhhheeeeeccccccceeeeeee-cHHHHHHHhhcCCCCccce-Eeeec
Confidence 776655443322110 0001111 11111 11111 34444444433221 12221 122221122233 66667
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+.+.++.|--|| .|.-+-.-|.|..-.+.+.+
T Consensus 251 ~gni~cyrwylDg--~i~igf~ag~iV~iS~h~ae 283 (615)
T KOG2247|consen 251 YGNIHCYRWYLDG--YILIGFDAGYIVSISAHNAE 283 (615)
T ss_pred CCceeEEEEeccc--cccccccceeEEEEeccchH
Confidence 7889999998876 45556555666666555443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=91.13 E-value=6.7 Score=41.57 Aligned_cols=108 Identities=13% Similarity=0.140 Sum_probs=55.0
Q ss_pred cEEEEEecCCCCCEEEEEe-----------CCC-cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 274 EGFAMDWSSTEPGVLATGD-----------CKR-NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~-----------~dg-~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
....|+|.++| .++++-. ..+ .|.+++-..+.........+.......+.+++.+++ ++++. ..
T Consensus 15 ~P~~ia~d~~G-~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~-~~ 90 (367)
T TIGR02604 15 NPIAVCFDERG-RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVAT-PP 90 (367)
T ss_pred CCceeeECCCC-CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeC-CC
Confidence 34578888887 5554432 223 677776543321111122333333456889998887 45543 33
Q ss_pred CeEEEEECCCCC----ccccee-ecCCc---CCCCeEEEEEcCCCCEEEEEe
Q psy4510 342 LSIRIWDTRVIN----TKSCML-TLPNA---HTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 342 g~i~iwd~~~~~----~~~~~~-~~~~~---~~~~v~~l~~~~~~~~l~sg~ 385 (812)
...++.|..... ....+. .+... +....+.++|.|+|.+.++-+
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 333444543211 111122 22111 234578899999998555444
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=91.08 E-value=6.7 Score=46.57 Aligned_cols=158 Identities=12% Similarity=0.231 Sum_probs=90.7
Q ss_pred EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE--------EcCCCCeEEEEEECCCeEEEE
Q psy4510 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ--------WSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~--------~~p~~~~~l~s~~~dg~i~iw 347 (812)
..+-+-|.=...-+|- |+.+.+|+..+++ ....+.+-...|..+. |-|.=+++|+.+.. -.|.++
T Consensus 82 ~~mGiFpeI~RaWiTi--Dn~L~lWny~~~~----e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~-~ei~il 154 (1311)
T KOG1900|consen 82 TDMGIFPEIGRAWITI--DNNLFLWNYESDN----ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATP-VEIVIL 154 (1311)
T ss_pred eeeccchhhcceEEEe--CCeEEEEEcCCCC----ccccccchhhhheeeeeecCCCCcchhhhheeEEeccc-ceEEEE
Confidence 3444455432444553 6789999999866 3444555555555554 33333444444433 445555
Q ss_pred ECCCCCcccce------eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC------C--------C------
Q psy4510 348 DTRVINTKSCM------LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK------K--------G------ 401 (812)
Q Consensus 348 d~~~~~~~~~~------~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~------~--------~------ 401 (812)
-+......... .++ ......|+|+....+|+.|++|- || .+|.+--.. . .
T Consensus 155 gV~~~~~~~~~~~f~~~~~i-~~dg~~V~~I~~t~nGRIF~~G~-dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~l 230 (1311)
T KOG1900|consen 155 GVSFDEFTGELSIFNTSFKI-SVDGVSVNCITYTENGRIFFAGR-DG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSL 230 (1311)
T ss_pred EEEeccccCcccccccceee-ecCCceEEEEEeccCCcEEEeec-CC--CEEEEEEeccCchhhcccccccCchhHHHHh
Confidence 33211111101 111 12356789999888888777665 55 455442100 0 0
Q ss_pred -CceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 402 -SSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 402 -~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..+..+. .+..+|..++..... .++.+-+..|+|.+||+....
T Consensus 231 vPs~~~~~~~~~dpI~qi~ID~SR-~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 231 VPSLLSVPGSSKDPIRQITIDNSR-NILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred hhhhhcCCCCCCCcceeeEecccc-ceeeeeccCceEEEEEccCCC
Confidence 0122233 567899999998764 689999999999999998743
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=90.83 E-value=0.041 Score=56.77 Aligned_cols=148 Identities=14% Similarity=0.240 Sum_probs=102.3
Q ss_pred cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC
Q psy4510 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN 353 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 353 (812)
......|-|.+ .-++.++.+..+..||-.... ..-....+...+++|.-++..+++.+-..+.+.+||+.+..
T Consensus 36 ~pi~~~w~~e~-~nlavaca~tiv~~YD~agq~------~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~ey 108 (615)
T KOG2247|consen 36 GPIIHRWRPEG-HNLAVACANTIVIYYDKAGQV------ILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY 108 (615)
T ss_pred ccceeeEecCC-CceehhhhhhHHHhhhhhcce------ecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhh
Confidence 34466788888 447777778888888854432 11112345667889998888777788889999999998533
Q ss_pred cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 354 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
... ......|.. .-+.|++.+..++.|...|.+.|++.+. .+.+.....|...+++++|.+.+ +.+.++.|
T Consensus 109 tqq--LE~gg~~s~--sll~wsKg~~el~ig~~~gn~viynhgt---sR~iiv~Gkh~RRgtq~av~lEd--~vil~dcd 179 (615)
T KOG2247|consen 109 TQQ--LESGGTSSK--SLLAWSKGTPELVIGNNAGNIVIYNHGT---SRRIIVMGKHQRRGTQIAVTLED--YVILCDCD 179 (615)
T ss_pred HHH--HhccCcchH--HHHhhccCCccccccccccceEEEeccc---hhhhhhhcccccceeEEEecccc--eeeecCcH
Confidence 221 222122222 2378999888999999999999999873 44444555589999999999975 56666666
Q ss_pred CCEE
Q psy4510 434 DQIA 437 (812)
Q Consensus 434 g~v~ 437 (812)
..+.
T Consensus 180 ~~L~ 183 (615)
T KOG2247|consen 180 NTLS 183 (615)
T ss_pred HHHH
Confidence 5443
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=90.67 E-value=2.9 Score=43.73 Aligned_cols=187 Identities=7% Similarity=0.044 Sum_probs=85.0
Q ss_pred CCCCCeEEEe------cCCCcEEEEccCCCCcccccccccC---CCCCCeeeeeEcCCCCcEEEee--------------
Q psy4510 186 STEPGVLATG------DCKRNIHIWTPREAGAWQVDQKPLG---GHTNSAEDLQWSDLKTALQTVD-------------- 242 (812)
Q Consensus 186 p~~~~~lat~------~~dg~v~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~l~s~~-------------- 242 (812)
| +|++++|+ ..-|-+.+.|-++.+. ...-. +...--+.+.|.|..+.++|.+
T Consensus 139 p-~G~imIS~lGd~~G~g~Ggf~llD~~tf~v----~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~ 213 (461)
T PF05694_consen 139 P-DGRIMISALGDADGNGPGGFVLLDGETFEV----KGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPE 213 (461)
T ss_dssp S-S--EEEEEEEETTS-S--EEEEE-TTT--E----EEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TT
T ss_pred C-CccEEEEeccCCCCCCCCcEEEEcCccccc----cceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChh
Confidence 5 88888775 1224466666554321 11111 1122334556666666666653
Q ss_pred ------CCCceEEeeCCCCCCCCCCCCCceEEcCCC--CcEEEEEec--CCCCCEEEEEeCCCcEEEEeCCCCCcceecc
Q psy4510 243 ------DPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWS--STEPGVLATGDCKRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 243 ------~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~s--p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 312 (812)
....+.+||+.+. ++++++.--. .....+.|. |....-++.+.-..+|..|--...+.|....
T Consensus 214 d~~~~~yG~~l~vWD~~~r-------~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~k 286 (461)
T PF05694_consen 214 DLEAGKYGHSLHVWDWSTR-------KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEK 286 (461)
T ss_dssp THHHH-S--EEEEEETTTT-------EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEE
T ss_pred HhhcccccCeEEEEECCCC-------cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeE
Confidence 2357999999985 6666665322 234566665 4442224444455667766554444433211
Q ss_pred ------------------ccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc----------
Q psy4510 313 ------------------KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA---------- 364 (812)
Q Consensus 313 ------------------~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------- 364 (812)
+.+..-..-|++|..|.+.+.+.+++-.+|.||.||+......+.+..+.-+
T Consensus 287 Vi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~ 366 (461)
T PF05694_consen 287 VIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPV 366 (461)
T ss_dssp EEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TT
T ss_pred EEECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCcc
Confidence 1111124568999999999988888889999999999875554443332111
Q ss_pred -----CCCCeEEEEEcCCCCEEEEE
Q psy4510 365 -----HTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 365 -----~~~~v~~l~~~~~~~~l~sg 384 (812)
-.+..+-+..|.+|++|+..
T Consensus 367 v~g~~l~GgPqMvqlS~DGkRlYvT 391 (461)
T PF05694_consen 367 VKGKRLRGGPQMVQLSLDGKRLYVT 391 (461)
T ss_dssp S------S----EEE-TTSSEEEEE
T ss_pred ccccccCCCCCeEEEccCCeEEEEE
Confidence 11234667777777755554
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.23 E-value=14 Score=41.63 Aligned_cols=189 Identities=8% Similarity=0.019 Sum_probs=87.2
Q ss_pred CCCeEEEecCCC------cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCCC
Q psy4510 188 EPGVLATGDCKR------NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~~dg------~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~~ 256 (812)
++.+++.||.++ .+..||..+..-. ....+........+++ -+++..+.|+.+ ..+..||..+..
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~--~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWN--KVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeee--ECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 667777877543 4677887665421 1111221111122222 356666777654 346677776642
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
......+..... ..+++.. ++ .+.+.|+.. ..+..||+.+. .|.... .+.........+. .+
T Consensus 370 -----W~~~~~lp~~r~-~~~~~~~-~~-~iYv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~-~~p~~r~~~~~~~--~~ 437 (534)
T PHA03098 370 -----WREEPPLIFPRY-NPCVVNV-NN-LIYVIGGISKNDELLKTVECFSLNTN-KWSKGS-PLPISHYGGCAIY--HD 437 (534)
T ss_pred -----eeeCCCcCcCCc-cceEEEE-CC-EEEEECCcCCCCcccceEEEEeCCCC-eeeecC-CCCccccCceEEE--EC
Confidence 111111111111 1122222 33 566777632 45888998765 344322 2211111111222 23
Q ss_pred CCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 331 EKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 331 ~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
+. +++.|+.+ ..+.+||..+.. ...+..... .......+.+ ++.+++.||.+ ..+.+||...
T Consensus 438 ~~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 438 GK-IYVIGGISYIDNIKVYNIVESYNPVTNK-WTELSSLNF-PRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred CE-EEEECCccCCCCCcccceEEEecCCCCc-eeeCCCCCc-ccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCC
Confidence 43 67777643 237888887532 111111111 1111222222 56677777754 4678888763
|
|
| >PF03066 Nucleoplasmin: Nucleoplasmin; InterPro: IPR004301 The nucleophosmin/nucleoplasmin family of chaperones includes nucleophosmin, nucleoplasmin and nucleoplasmin-like proteins | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.082 Score=46.86 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=3.4
Q ss_pred ccccc--ccccccccc
Q psy4510 4 VHLNS--CPALEASND 17 (812)
Q Consensus 4 ~~~~~--~~~~~~~~~ 17 (812)
|||.. ++.++++.+
T Consensus 99 VhisG~~~~~~~~d~~ 114 (149)
T PF03066_consen 99 VHISGQHLVAMEEDEE 114 (149)
T ss_dssp EEEEEEEEEE------
T ss_pred EEeeCccccccccccc
Confidence 45432 344544444
|
They function as nuclear chaperones which are needed for the proper assembly of nucleosomes and the attainment of proper higher order chromatin structures [].; GO: 0003676 nucleic acid binding; PDB: 2P1B_E 1XB9_I 1XE0_C 1NLQ_A 2VTX_E 1K5J_D 1EJY_N 1EE5_B 3T30_J. |
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=90.05 E-value=26 Score=36.44 Aligned_cols=154 Identities=10% Similarity=0.071 Sum_probs=83.2
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC-CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
.+.++++.+.|++ .++++|. .|.+..- ...+ ..|... ...-...++++.+.++++ +++. +..|.+++=...
T Consensus 172 ~g~~~~i~~~~~g-~~v~~g~-~G~i~~s-~~~gg~tW~~~---~~~~~~~l~~i~~~~~g~-~~~v-g~~G~~~~~s~d 243 (334)
T PRK13684 172 AGVVRNLRRSPDG-KYVAVSS-RGNFYST-WEPGQTAWTPH---QRNSSRRLQSMGFQPDGN-LWML-ARGGQIRFNDPD 243 (334)
T ss_pred cceEEEEEECCCC-eEEEEeC-CceEEEE-cCCCCCeEEEe---eCCCcccceeeeEcCCCC-EEEE-ecCCEEEEccCC
Confidence 4568899999986 5555554 4655432 2222 233322 123446889999999987 4444 456776542233
Q ss_pred CCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCCCEEEEEEccCCCcE
Q psy4510 351 VINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTAPVTTVEWHPTESST 426 (812)
Q Consensus 351 ~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~ 426 (812)
.+..-..+ ..+ ......+..+.+.+++..+++| .+|.|. .... .++.-...+ .-....+.+.|..++ ..
T Consensus 244 ~G~sW~~~-~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d---~G~tW~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (334)
T PRK13684 244 DLESWSKP-IIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKD---GGKTWEKDPVGEEVPSNFYKIVFLDPE-KG 316 (334)
T ss_pred CCCccccc-cCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCC---CCCCCeECCcCCCCCcceEEEEEeCCC-ce
Confidence 22222211 111 1122457888999887766555 566554 3333 222222222 222357788877654 34
Q ss_pred EEEEECCCCEEEEEc
Q psy4510 427 FASGGADDQIALWDL 441 (812)
Q Consensus 427 l~s~~~dg~v~iwd~ 441 (812)
+..+..|.|..|+-
T Consensus 317 -~~~G~~G~il~~~~ 330 (334)
T PRK13684 317 -FVLGQRGVLLRYVG 330 (334)
T ss_pred -EEECCCceEEEecC
Confidence 44566788877763
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=89.44 E-value=1.7 Score=41.97 Aligned_cols=70 Identities=9% Similarity=0.019 Sum_probs=41.2
Q ss_pred ecCCCCEEEeecCCCeEEEeecCCCCCcccc--ccc-cc-------CCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVD--QKP-LV-------GHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 697 ~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~--~~~-~~-------gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
+..++.+|++-+.+|.+++||+.+++..-.. +.+ +. .....|..+.++.+|. -|++-+ +|....|+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~-PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGV-PIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCC-EEEEEe-CCCEEEeccc
Confidence 3445556666666666666666665531100 001 21 3556788899998887 566655 4677777754
Q ss_pred Cc
Q psy4510 767 DM 768 (812)
Q Consensus 767 ~~ 768 (812)
=+
T Consensus 96 L~ 97 (219)
T PF07569_consen 96 LG 97 (219)
T ss_pred cc
Confidence 33
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=89.21 E-value=4.3 Score=45.32 Aligned_cols=108 Identities=17% Similarity=0.282 Sum_probs=69.6
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEc--CCCCcEEEeeCCCceEEeeCCCC----CCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS--DLKTALQTVDDPFQLAEHNKKRG----KGPGIP 261 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s--~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~ 261 (812)
-++..++-+....+.|||...+.. .........+.|.++.|. |+++.+++.+-.+.|.++....- ..+ .
T Consensus 40 ~~k~a~V~~~~~~LtIWD~~~~~l---E~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p--~ 114 (631)
T PF12234_consen 40 IKKIAVVDSSRSELTIWDTRSGVL---EYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP--S 114 (631)
T ss_pred cCcEEEEECCCCEEEEEEcCCcEE---EEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc--c
Confidence 344444444456899999987652 111222567899999984 78899999999999999865321 111 1
Q ss_pred CCCceE--EcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 262 TPPLFS--FSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 262 ~~~~~~--~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
..++.. +..|+ .+|.+..|.++| .|++|+ .+.+.|++-.
T Consensus 115 w~~i~~i~i~~~T~h~Igds~Wl~~G--~LvV~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 115 WAPIRKIDISSHTPHPIGDSIWLKDG--TLVVGS-GNQLFVFDKW 156 (631)
T ss_pred cceeEEEEeecCCCCCccceeEecCC--eEEEEe-CCEEEEECCC
Confidence 233333 34555 678999999997 455544 2678888743
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=88.84 E-value=17 Score=34.48 Aligned_cols=99 Identities=8% Similarity=0.040 Sum_probs=61.5
Q ss_pred eeeeEcCCCCcEEEe-eCCCceEEeeCCCCCCCCCCCCCceEEcCC----CCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 227 EDLQWSDLKTALQTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFSGH----LTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 227 ~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
..++|+.+.+.+... +.+..|.-||.+-..+.....+.+..++.. .-.--.++....| .+.++.-..++|...|
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG-~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEG-NLYVATFNGGTVQKVD 239 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCC-cEEEEEecCcEEEEEC
Confidence 468898887766544 467778778844322222223444444321 1111234444556 6677777788999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
+.+++ .+..++-....|+++||--.
T Consensus 240 p~tGK----~L~eiklPt~qitsccFgGk 264 (310)
T KOG4499|consen 240 PTTGK----ILLEIKLPTPQITSCCFGGK 264 (310)
T ss_pred CCCCc----EEEEEEcCCCceEEEEecCC
Confidence 99998 45555556889999999643
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=88.75 E-value=57 Score=38.51 Aligned_cols=171 Identities=12% Similarity=0.151 Sum_probs=99.3
Q ss_pred CCCCCeeeeeEc---CC---CCcEEEeeCCCceEEeeCC------CC--CCCCCCCCCceEEcCCC---CcEEEEEecCC
Q psy4510 221 GHTNSAEDLQWS---DL---KTALQTVDDPFQLAEHNKK------RG--KGPGIPTPPLFSFSGHL---TEGFAMDWSST 283 (812)
Q Consensus 221 ~h~~~V~~l~~s---~~---~~~l~s~~~d~~i~vwd~~------~~--~~~~~~~~~~~~~~~h~---~~v~~l~~sp~ 283 (812)
.-..+|..|+|+ .. ...++..-....+.|.... .. ....+...++..+..+. .+...++|+|.
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~ 156 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW 156 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence 345689999998 21 1123444455556666611 11 11122335566665333 35678999998
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCccee-ccccccCCC----------CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 284 EPGVLATGDCKRNIHIWTPREAGAWQV-DQKPLVGHT----------NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 284 ~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~~~~~h~----------~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
....||..+..|...||++........ .......+. +.-..+.|.++... |+.++. ..+.++|++..
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~-lLv~~r-~~l~~~d~~~~ 234 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNR-LLVCNR-SKLMLIDFESN 234 (765)
T ss_pred ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCE-EEEEcC-CceEEEECCCC
Confidence 878999999999999999922211000 011111111 23347889888775 555544 67899999865
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCC
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~ 397 (812)
.....+.. ......|..+.-++... .|+.. ...|...++..
T Consensus 235 ~~~~~l~~--~~~~~~IlDv~~~~~~~~~~FiLT--s~eiiw~~~~~ 277 (765)
T PF10214_consen 235 WQTEYLVT--AKTWSWILDVKRSPDNPSHVFILT--SKEIIWLDVKS 277 (765)
T ss_pred Cccchhcc--CCChhheeeEEecCCccceEEEEe--cCeEEEEEccC
Confidence 43222211 34556788888888743 33332 25688888874
|
These proteins are found in fungi. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=88.75 E-value=27 Score=34.82 Aligned_cols=214 Identities=11% Similarity=0.091 Sum_probs=115.1
Q ss_pred eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC-----CCCcEEEEEecCCC-----------CCEEEE
Q psy4510 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-----HLTEGFAMDWSSTE-----------PGVLAT 290 (812)
Q Consensus 227 ~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~~-----------~~~l~s 290 (812)
..|+++|.+.+-++....+...+||.........+...+.++.. .....+.+.|+... ...++.
T Consensus 26 WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fif 105 (336)
T TIGR03118 26 WGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFLF 105 (336)
T ss_pred ceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEEE
Confidence 46899999988888888899999998732211112233344432 12356677776432 134678
Q ss_pred EeCCCcEEEEeCCCCCcce-ecccccc-CCCCCE-EEEEEcC--CCCeEEEEEECCCeEEEEECCCCCcccceeecC---
Q psy4510 291 GDCKRNIHIWTPREAGAWQ-VDQKPLV-GHTNSV-EDLQWSP--GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP--- 362 (812)
Q Consensus 291 g~~dg~i~vwd~~~~~~~~-~~~~~~~-~h~~~v-~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 362 (812)
+++||+|.-|...-..... .....+. +..+.| ..+++.. .+..+.++--..++|.++|-.-..... ...+.
T Consensus 106 ~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~-~g~F~DP~ 184 (336)
T TIGR03118 106 VTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPL-PGSFIDPA 184 (336)
T ss_pred EeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccC-CCCccCCC
Confidence 8899999999964433100 0001111 112333 3455543 355555555668999999865221000 00000
Q ss_pred -CcCCCC--eEE------EEE---cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEccC-----C
Q psy4510 363 -NAHTSD--VNV------ISW---NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHPT-----E 423 (812)
Q Consensus 363 -~~~~~~--v~~------l~~---~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p~-----~ 423 (812)
.+.-.+ |.. +.| .++.+.=+.|..-|.|-+||+. +..++++.. .-..-..|+..|- .
T Consensus 185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~----G~l~~r~as~g~LNaPWG~a~APa~FG~~s 260 (336)
T TIGR03118 185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN----GQLLRRVASSGRLNAPWGLAIAPESFGSLS 260 (336)
T ss_pred CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC----CcEEEEeccCCcccCCceeeeChhhhCCCC
Confidence 000011 111 111 1122222334445789999994 677777732 2233456666553 1
Q ss_pred CcEEEEEECCCCEEEEEcCCCC
Q psy4510 424 SSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 424 ~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..+|+---.||+|..+|..+.+
T Consensus 261 g~lLVGNFGDG~InaFD~~sG~ 282 (336)
T TIGR03118 261 GALLVGNFGDGTINAYDPQSGA 282 (336)
T ss_pred CCeEEeecCCceeEEecCCCCc
Confidence 2355555569999999988764
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=86.55 E-value=35 Score=41.01 Aligned_cols=172 Identities=10% Similarity=0.089 Sum_probs=97.9
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE--------cCCCCcEEE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW--------SDLKTALQT 240 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~--------s~~~~~l~s 240 (812)
+.++ +|...-..|-+-|.=++.-+|- |+.+.+|+.+++. ....+.+-...|..+.. .|.=++|+.
T Consensus 72 ~eq~-~~~~~~~~mGiFpeI~RaWiTi--Dn~L~lWny~~~~----e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLv 144 (1311)
T KOG1900|consen 72 LEQF-SNIECKTDMGIFPEIGRAWITI--DNNLFLWNYESDN----ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLV 144 (1311)
T ss_pred HHHh-cCcceeeeeccchhhcceEEEe--CCeEEEEEcCCCC----ccccccchhhhheeeeeecCCCCcchhhhheeEE
Confidence 3344 4544444444445344444444 6789999999865 45556666666666543 344456666
Q ss_pred eeCCCceEEeeCCCCCCCCCC--CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC--CCCCcceec-----
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIP--TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP--REAGAWQVD----- 311 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~--~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~--~~~~~~~~~----- 311 (812)
....-.|.++-+.-....... .....++......|.++....+| .++-++.|| .+|.+ .....|...
T Consensus 145 vaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nG--RIF~~G~dg--~lyEl~Yq~~~gWf~~rc~Ki 220 (1311)
T KOG1900|consen 145 VATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENG--RIFFAGRDG--NLYELVYQAEDGWFGSRCRKI 220 (1311)
T ss_pred ecccceEEEEEEEeccccCcccccccceeeecCCceEEEEEeccCC--cEEEeecCC--CEEEEEEeccCchhhcccccc
Confidence 666666666654432111000 01112233335567888855554 555556677 44543 221111110
Q ss_pred -------------ccccc-CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 312 -------------QKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 312 -------------~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
...+. .+..+|..+.....-. ++.+-+..|+|.+||+...
T Consensus 221 clt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~-IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 221 CLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRN-ILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred cCchhHHHHhhhhhhcCCCCCCCcceeeEeccccc-eeeeeccCceEEEEEccCC
Confidence 11222 5677999999887655 8999999999999999753
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=86.39 E-value=36 Score=33.56 Aligned_cols=185 Identities=12% Similarity=0.086 Sum_probs=100.6
Q ss_pred eeeeeEcCCCCcEEEeeCCC--ceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 226 AEDLQWSDLKTALQTVDDPF--QLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
...+.|.+++.++-+.+.-| .|+.+|+.++ +.+.... ...--...++...+ .+..-.=.++...+||.
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg-------~~~~~~~l~~~~FgEGit~~~d--~l~qLTWk~~~~f~yd~ 117 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETG-------KVLQSVPLPPRYFGEGITILGD--KLYQLTWKEGTGFVYDP 117 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTS-------SEEEEEE-TTT--EEEEEEETT--EEEEEESSSSEEEEEET
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCC-------cEEEEEECCccccceeEEEECC--EEEEEEecCCeEEEEcc
Confidence 44678878888888877655 6889999886 3222221 11222334554443 44555556789999999
Q ss_pred CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEE
Q psy4510 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l 381 (812)
.+-+ ....+. ..+.=+.++ .+++. |+.......|+++|..+......+.... ...-..++-+.|. +|.+.
T Consensus 118 ~tl~----~~~~~~-y~~EGWGLt--~dg~~-Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~Iy 188 (264)
T PF05096_consen 118 NTLK----KIGTFP-YPGEGWGLT--SDGKR-LIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIY 188 (264)
T ss_dssp TTTE----EEEEEE--SSS--EEE--ECSSC-EEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEE
T ss_pred ccce----EEEEEe-cCCcceEEE--cCCCE-EEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEE
Confidence 8765 222332 123445666 45665 4445556789999987543332222110 1112346667775 56566
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEcc---------------cCCCCEEEEEEccCCCcEEEEEE
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFK---------------HHTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~---------------~h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
|-.-....|...|.. ++..+..+. ....-.+.|++.|....+++||=
T Consensus 189 ANVW~td~I~~Idp~---tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 189 ANVWQTDRIVRIDPE---TGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp EEETTSSEEEEEETT---T-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred EEeCCCCeEEEEeCC---CCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 655556667777776 344443321 01345789999998876777663
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=86.32 E-value=1.6 Score=28.37 Aligned_cols=29 Identities=21% Similarity=0.247 Sum_probs=20.7
Q ss_pred CcceeEeEEecCCceeEEeeccC--CceEEe
Q psy4510 735 TNSVEDLQWSPGEKRVLASCSVD--RSNRIG 763 (812)
Q Consensus 735 ~~~V~~l~fs~dg~~~L~s~s~D--g~i~iW 763 (812)
...-....|||||++++.++..+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34567889999999766677676 666666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=85.37 E-value=32 Score=38.69 Aligned_cols=146 Identities=14% Similarity=0.241 Sum_probs=67.4
Q ss_pred CEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC------CeEEEEECCCCCc
Q psy4510 286 GVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD------LSIRIWDTRVINT 354 (812)
Q Consensus 286 ~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~ 354 (812)
.+.+.||.+ ..+..||+.+. .|... ..+.........+. -++ .+++.|+.+ ..+..||+.+..
T Consensus 344 ~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~-~~lp~~r~~~~~~~--~~~-~iYv~GG~~~~~~~~~~v~~yd~~t~~- 417 (534)
T PHA03098 344 RIYVIGGIYNSISLNTVESWKPGES-KWREE-PPLIFPRYNPCVVN--VNN-LIYVIGGISKNDELLKTVECFSLNTNK- 417 (534)
T ss_pred EEEEEeCCCCCEecceEEEEcCCCC-ceeeC-CCcCcCCccceEEE--ECC-EEEEECCcCCCCcccceEEEEeCCCCe-
Confidence 677777765 35778888765 34332 22221111111111 234 367777632 457888887432
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC--------cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG--------CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg--------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
...+..++.... ...++. .++.+++.||.++ .+.+||..+.+ ...+..+.........+.+ + ..+
T Consensus 418 W~~~~~~p~~r~-~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~r~~~~~~~~--~-~~i 490 (534)
T PHA03098 418 WSKGSPLPISHY-GGCAIY--HDGKIYVIGGISYIDNIKVYNIVESYNPVTNK-WTELSSLNFPRINASLCIF--N-NKI 490 (534)
T ss_pred eeecCCCCcccc-CceEEE--ECCEEEEECCccCCCCCcccceEEEecCCCCc-eeeCCCCCcccccceEEEE--C-CEE
Confidence 222222211111 112222 2456677776432 37888886421 1111111111111112222 3 356
Q ss_pred EEEEECC-----CCEEEEEcCCC
Q psy4510 427 FASGGAD-----DQIALWDLAVE 444 (812)
Q Consensus 427 l~s~~~d-----g~v~iwd~~~~ 444 (812)
++.||.+ +.|.+||..+.
T Consensus 491 yv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 491 YVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred EEEcCCcCCcccceeEEEeCCCC
Confidence 7777654 35777777655
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=83.95 E-value=91 Score=36.18 Aligned_cols=79 Identities=27% Similarity=0.456 Sum_probs=53.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEecC-CCC------CCCc-eE--Ec--------ccCCCCEEEEEEccCC--Cc
Q psy4510 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLR-RFK------KGSS-VA--TF--------KHHTAPVTTVEWHPTE--SS 425 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~-~~~------~~~~-~~--~~--------~~h~~~v~~v~~~p~~--~~ 425 (812)
.-.|..|..||+|.+++..|..|. .|-.+. .+. .+.. +. ++ ..+...|..+.|+|.+ +.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~v-~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRGV-VVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCcE-EEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 346899999999998888887664 444443 111 1111 11 11 1345679999999974 35
Q ss_pred EEEEEECCCCEEEEEcCCCC
Q psy4510 426 TFASGGADDQIALWDLAVER 445 (812)
Q Consensus 426 ~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|+.-..|+++++||+....
T Consensus 163 ~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred eEEEEecCCEEEEEecCCCC
Confidence 78888889999999997553
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=82.97 E-value=30 Score=29.90 Aligned_cols=113 Identities=11% Similarity=0.020 Sum_probs=67.8
Q ss_pred eEcCCCCcEEEeeCCCceEEeeCCCCCCCCC-CCCCceEEcCCCCcEEEEEecC----CCCCEEEEEeCCCcEEEEeCCC
Q psy4510 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGI-PTPPLFSFSGHLTEGFAMDWSS----TEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 230 ~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~h~~~v~~l~~sp----~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
.|......|++++..+.|.|++......... ...++..+. -...|.+|+--+ ++...|+.|+. .+|..||+..
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~ 82 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVEN 82 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEccc
Confidence 4445566788899999999998765422111 123334443 356677776544 23356777765 7899999988
Q ss_pred CCcceeccccccCCCCCEEEEEEcC---CCCeEEEEEECCCeEEEEECC
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSP---GEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p---~~~~~l~s~~~dg~i~iwd~~ 350 (812)
... .-++.-...|+++.+-. .... ++..+.+..|.-||..
T Consensus 83 N~d-----~Fyke~~DGvn~i~~g~~~~~~~~-l~ivGGncsi~Gfd~~ 125 (136)
T PF14781_consen 83 NSD-----LFYKEVPDGVNAIVIGKLGDIPSP-LVIVGGNCSIQGFDYE 125 (136)
T ss_pred Cch-----hhhhhCccceeEEEEEecCCCCCc-EEEECceEEEEEeCCC
Confidence 752 22333446677776632 2222 4555556777777765
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=82.94 E-value=38 Score=32.03 Aligned_cols=152 Identities=13% Similarity=0.236 Sum_probs=81.4
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC---C---cEEEE-ecCCCC-CCCceE-
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD---G---CIHVW-DLRRFK-KGSSVA- 405 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---g---~i~iw-d~~~~~-~~~~~~- 405 (812)
|+.+...+.|.+|++.. +....+.++ ..-+.|..+.++..|++|+|-=.+ . .+|+| +.|... ...++.
T Consensus 31 Lfva~~g~~Vev~~l~~-~~~~~~~~F--~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 31 LFVAASGCKVEVYDLEQ-EECPLLCTF--STVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred EEEEcCCCEEEEEEccc-CCCceeEEE--cchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 33335568899999983 233344455 334789999999999999986432 2 45664 333210 112221
Q ss_pred EcccC---------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 406 TFKHH---------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 406 ~~~~h---------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
.+-+| ..++.+++..|..+++ +.|+ ++.+.+|.+....... ..-...+.. ..+
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~L-lVg~-~~~l~lf~l~~~~~~~---~~~~~lDFe-~~l 181 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNL-LVGC-GNKLVLFTLKYQTIQS---EKFSFLDFE-RSL 181 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCE-EEEc-CCEEEEEEEEEEEEec---ccccEEech-hhh
Confidence 22221 3356778888875544 4444 4679999887653210 000011111 111
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
..+...-.+..+++.. +.++..+.....+++
T Consensus 182 ~~~~~~~~p~~v~ic~---~yiA~~s~~ev~Vlk 212 (215)
T PF14761_consen 182 IDHIDNFKPTQVAICE---GYIAVMSDLEVLVLK 212 (215)
T ss_pred hheecCceEEEEEEEe---eEEEEecCCEEEEEE
Confidence 1222223456666666 466666666666654
|
|
| >PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=82.83 E-value=0.57 Score=48.23 Aligned_cols=8 Identities=13% Similarity=-0.205 Sum_probs=2.9
Q ss_pred CCCcEEEe
Q psy4510 234 LKTALQTV 241 (812)
Q Consensus 234 ~~~~l~s~ 241 (812)
|+.-+++|
T Consensus 191 DSTDFVCG 198 (458)
T PF10446_consen 191 DSTDFVCG 198 (458)
T ss_pred CcccccCC
Confidence 33333333
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=82.43 E-value=89 Score=34.96 Aligned_cols=25 Identities=16% Similarity=0.090 Sum_probs=20.0
Q ss_pred CCCC--eEEEEEECCCeEEEEECCCCC
Q psy4510 329 PGEK--RVLASCSVDLSIRIWDTRVIN 353 (812)
Q Consensus 329 p~~~--~~l~s~~~dg~i~iwd~~~~~ 353 (812)
.+++ .+++.+..+|.+.+.|.++++
T Consensus 310 ~~G~~~~~v~~~~K~G~~~vlDr~tG~ 336 (527)
T TIGR03075 310 KDGKPRKLLAHADRNGFFYVLDRTNGK 336 (527)
T ss_pred cCCcEEEEEEEeCCCceEEEEECCCCc
Confidence 3554 578899999999999998654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=82.00 E-value=8.2 Score=35.67 Aligned_cols=30 Identities=20% Similarity=0.418 Sum_probs=25.5
Q ss_pred CEEEEEEcCCC-----CeEEEEEECCCeEEEEECC
Q psy4510 321 SVEDLQWSPGE-----KRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 321 ~v~~~~~~p~~-----~~~l~s~~~dg~i~iwd~~ 350 (812)
.|..++|||.| +.+|++.+.+|.|.||...
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~ 121 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP 121 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence 78899999954 5689999999999999865
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=81.27 E-value=72 Score=33.10 Aligned_cols=151 Identities=12% Similarity=0.133 Sum_probs=82.6
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCc------EEEEeCCCCC----c-ceeccccccCCC--------CCEEEEEEcCCCCe
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRN------IHIWTPREAG----A-WQVDQKPLVGHT--------NSVEDLQWSPGEKR 333 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~------i~vwd~~~~~----~-~~~~~~~~~~h~--------~~v~~~~~~p~~~~ 333 (812)
+.+.+|.+.|++ +.+++-+.+|. +...++.... . .......+..-. -...+|++.+++.
T Consensus 20 GGlSgl~~~~~~-~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~- 97 (326)
T PF13449_consen 20 GGLSGLDYDPDD-GRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS- 97 (326)
T ss_pred CcEeeEEEeCCC-CEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC-
Confidence 567899999765 56666666777 6666655411 0 000111122111 1456888966666
Q ss_pred EEEEEECC------CeEEEEECCCCCcccceeecC------------CcCCCCeEEEEEcCCCCEEEEEeC-----CC--
Q psy4510 334 VLASCSVD------LSIRIWDTRVINTKSCMLTLP------------NAHTSDVNVISWNRTEPLIVSGGD-----DG-- 388 (812)
Q Consensus 334 ~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~------------~~~~~~v~~l~~~~~~~~l~sg~~-----dg-- 388 (812)
++++.-.+ ..|+.++.. +.....+ .++ .......-+|+++|+|+.|+++.. |+
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~-~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~ 175 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIRRF-PVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPR 175 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-CcccceE-ccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcc
Confidence 56666556 678888865 2221111 111 123556889999999996655533 22
Q ss_pred -------cEEEEecCCCCCCCceEEc----cc-----CCCCEEEEEEccCCCcEEE
Q psy4510 389 -------CIHVWDLRRFKKGSSVATF----KH-----HTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 389 -------~i~iwd~~~~~~~~~~~~~----~~-----h~~~v~~v~~~p~~~~~l~ 428 (812)
.++++.......+.+...+ .. ....|..+.+.+++. +|+
T Consensus 176 ~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~-lLv 230 (326)
T PF13449_consen 176 ANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGR-LLV 230 (326)
T ss_pred cccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCc-EEE
Confidence 1555554421112222222 21 346788899999875 443
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=80.60 E-value=7.4 Score=35.97 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=24.3
Q ss_pred CeeeeeEcCCC------CcEEEeeCCCceEEeeCCC
Q psy4510 225 SAEDLQWSDLK------TALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 225 ~V~~l~~s~~~------~~l~s~~~d~~i~vwd~~~ 254 (812)
.|.+++|||.| ..|++...++.+.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 78899999965 3788888999999997553
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=80.06 E-value=23 Score=42.62 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=32.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 207 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~ 207 (812)
.....+. |-......++|+| ...++|.|+.+|.|++|-..
T Consensus 26 ~~~~~~~-G~~~~~~~~afD~-~q~llai~t~tg~i~~yg~~ 65 (993)
T KOG1983|consen 26 FDKTNRH-GFPSTPSALAFDP-TQGLLAIGTRTGAIKIYGQP 65 (993)
T ss_pred cccceec-CCCCCCcceeecc-ccceEEEEEecccEEEeccc
Confidence 3445555 6667778899999 99999999999999999543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 812 | ||||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-25 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 3e-25 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 2e-14 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 3e-14 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 2e-14 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 4e-14 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 2e-14 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 4e-14 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 4e-14 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 2e-13 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 3e-10 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 4e-10 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 4e-10 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 5e-10 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 5e-10 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 5e-10 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 5e-10 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 5e-10 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 6e-10 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 6e-10 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 6e-10 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 6e-10 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 6e-10 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 7e-10 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 7e-10 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 7e-10 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 7e-10 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 7e-10 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 7e-10 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 7e-10 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 9e-10 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 4e-09 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-04 | ||
| 4aez_A | 401 | Crystal Structure Of Mitotic Checkpoint Complex Len | 4e-09 | ||
| 3fm0_A | 345 | Crystal Structure Of Wd40 Protein Ciao1 Length = 34 | 5e-09 | ||
| 2pm9_A | 416 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 3e-08 | ||
| 2hes_X | 330 | Cytosolic Iron-sulphur Assembly Protein- 1 Length = | 9e-08 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 3e-07 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 4e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 5e-07 | ||
| 2aq5_A | 402 | Crystal Structure Of Murine Coronin-1 Length = 402 | 5e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 5e-07 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 6e-07 | ||
| 4i79_A | 399 | Crystal Structure Of Human Nup43 Length = 399 | 7e-07 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 1e-06 | ||
| 2b4e_A | 402 | Crystal Structure Of Murine Coronin-1: Monoclinic F | 6e-05 | ||
| 3jro_A | 753 | Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice | 2e-06 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 2e-06 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 3e-06 | ||
| 3jrp_A | 379 | Sec13 With Nup145c (Aa109-179) Insertion Blade Leng | 3e-06 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 3e-06 | ||
| 2pm6_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 3e-06 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 3e-06 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 4e-06 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 4e-06 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-06 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 4e-06 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 4e-06 | ||
| 2pm9_B | 297 | Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O | 4e-06 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-06 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 6e-06 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 7e-06 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 1e-05 | ||
| 4gqb_B | 344 | Crystal Structure Of The Human Prmt5:mep50 Complex | 1e-05 | ||
| 2pm7_B | 297 | Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF | 1e-05 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 3e-05 | ||
| 3bg0_A | 316 | Architecture Of A Coat For The Nuclear Pore Membran | 3e-05 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 3e-05 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-04 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 1e-04 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-04 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-04 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-04 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 4e-04 | ||
| 1nr0_A | 611 | Two Seven-Bladed Beta-Propeller Domains Revealed By | 4e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 6e-04 |
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401 | Back alignment and structure |
|
| >pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345 | Back alignment and structure |
|
| >pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 416 | Back alignment and structure |
|
| >pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|4I79|A Chain A, Crystal Structure Of Human Nup43 Length = 399 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402 | Back alignment and structure |
|
| >pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex Length = 344 | Back alignment and structure |
|
| >pdb|2PM7|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Selenomethionine Version Length = 297 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 324 bits (832), Expect = e-103
Identities = 88/427 (20%), Positives = 154/427 (36%), Gaps = 65/427 (15%)
Query: 70 PSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSN 129
P Y ++ P L+ + D + Y + GT + N L++ +
Sbjct: 33 PFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVH-RLILGTHTSDEQ-NHLLIASVQL 90
Query: 130 LTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP 189
+ + + ++++ + K I H E +
Sbjct: 91 PSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKI---------NHEGEVNRARYMPQNA 141
Query: 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAE 249
V+AT ++ ++ D + +
Sbjct: 142 CVIATKTPSSDVLVF----------------------------DYTKHPSKPEPSGE--- 170
Query: 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAG 306
P GH EG+ + W+ G L + I +W +
Sbjct: 171 ------------CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH 218
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
+ GHT VED+ W + + S + D + IWDTR NT T+ AHT
Sbjct: 219 RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHT 277
Query: 367 SDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425
++VN +S+N +E ++ +G D + +WDLR K + +F+ H + V+W P +
Sbjct: 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNET 335
Query: 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE-IKELHWHPQLPG 484
AS G D ++ +WDL+ + EQ + +D P +LLFIH G I + W+P P
Sbjct: 336 ILASSGTDRRLHVWDLSKIGE---EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 392
Query: 485 TIISTAN 491
I S +
Sbjct: 393 IICSVSE 399
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 7e-30
Identities = 32/218 (14%), Positives = 60/218 (27%), Gaps = 46/218 (21%)
Query: 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLA 604
S+ + + + ++++ E G + I H G +NR R + +A
Sbjct: 87 SVQLPSEDAQFDGSHYDNEKGE-FGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIA 145
Query: 605 GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 664
V ++D + + P GH EG+ + W
Sbjct: 146 T-KTPSSDVLVFDYTKHPSKPEPSGE---------------CQPDLRLRGHQKEGYGLSW 189
Query: 665 SSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAW 724
+ G L + I +W +
Sbjct: 190 NPNLNGYLLSASDDHTICLWDIN-----------------------------ATPKEHRV 220
Query: 725 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ GHT VED+ W + + S + D+ I
Sbjct: 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMI 258
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Length = 430 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 9e-10
Identities = 62/409 (15%), Positives = 123/409 (30%), Gaps = 109/409 (26%)
Query: 413 PVTTVEWHPTES--------------STFASGGADDQIALWDLAV-------------ER 445
P T +W P + T S + + + + +
Sbjct: 47 PSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIASVQLPSEDAQFDGSHYDNE 105
Query: 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF-------- 497
E + + ++ H G E+ + PQ +I+T ++
Sbjct: 106 KGEFGGFGSVCGKIEIEIKINHEG--EVNRARYMPQ-NACVIATKTPSSDVLVFDYTKHP 162
Query: 498 -RTISDLPSQLLFIHLG-QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555
+ Q G QKE L W+P L G ++S ++ TI + ++ +T ++
Sbjct: 163 SKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH-----TICLWDINATPKE 217
Query: 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGI 615
+ + + F H + V + V + K+ I
Sbjct: 218 H------------------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV-ADDQKLMI 258
Query: 616 WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675
WD + K P + H E + ++ +LATG
Sbjct: 259 WDTRN---------------NNTSK-------PSHTVDAHTAEVNCLSFNPYSEFILATG 296
Query: 676 DCKRNIHIW---TPREAGA---------WSVYLYTNRFGVLATGDCKRNIHIW---TPRE 720
+ + +W + + V + +LA+ R +H+W E
Sbjct: 297 SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356
Query: 721 AGAWQVDQKP-------LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ + + GHT + D W+P E ++ S S D ++
Sbjct: 357 EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQV 405
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-28
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 55/283 (19%)
Query: 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
+ FS H + + +++ + VLA+G I IW
Sbjct: 102 AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW-------------------- 141
Query: 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
D+ ++ + L + E ++ W+ +
Sbjct: 142 --------DMNKCTESPSNYTPLT----------------PGQSMSSVDEVISLAWNQSL 177
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQ--VDQKPLVGHTNSVEDLQWSPGEKRVLASCS--- 339
V A+ IW + P G + ++W P +A+ +
Sbjct: 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRF 398
D SI IWD R N + + TL H + + W + L++S G D + +W+
Sbjct: 238 NDPSILIWDLR--NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP--- 292
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ ++ F ++ P FA D++I + L
Sbjct: 293 ESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-26
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 264 PLFSFSGHLTEGF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
P+ S F +DWS ++A ++ +++ EA H++SV
Sbjct: 60 PIASLQVD--SKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSV 116
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN--------AHTSDVNVISW 374
+ ++++ + VLAS + I IWD +N + + + +V ++W
Sbjct: 117 KTVKFNAKQDNVLASGGNNGEIFIWD---MNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173
Query: 375 NRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKH------HTAPVTTVEWHP---TES 424
N++ + S G +WDL K V + ++ VEWHP T
Sbjct: 174 NQSLAHVFASAGSSNFASIWDL---KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRV 230
Query: 425 STFASGGADDQ-IALWDLA 442
+T A+G +D I +WDL
Sbjct: 231 AT-ATGSDNDPSILIWDLR 248
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 7e-26
Identities = 50/292 (17%), Positives = 93/292 (31%), Gaps = 75/292 (25%)
Query: 168 PLFSFSGHLTEGF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
P+ S F +DWS ++A ++ +++ EA H++S
Sbjct: 60 PIASLQVD--SKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSV 116
Query: 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 286
+ ++++ Q ++
Sbjct: 117 KTVKFN-----------AKQ-----------------------DNV-------------- 128
Query: 287 VLATGDCKRNIHIW---TPREAGAWQVDQKP--LVGHTNSVEDLQWSPGEKRVLASCSVD 341
LA+G I IW E+ + P + + V L W+ V AS
Sbjct: 129 -LASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS 187
Query: 342 LSIRIWDTRVINTKSCMLTLPNA-----HTSDVNVISW---NRTEPLIVSGGD-DGCIHV 392
IWD + K ++ L ++V+ W N T +G D D I +
Sbjct: 188 NFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244
Query: 393 WDLRRFKKGSSVA--TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
WDLR ++ + H + +++W + S G D+ + LW+
Sbjct: 245 WDLR---NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-24
Identities = 73/457 (15%), Positives = 143/457 (31%), Gaps = 102/457 (22%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD--VNVISW 374
H + + V A+ S D S+ +W + + + D N + W
Sbjct: 21 SHDKIPLLVSGTV-SGTVDANFSTDSSLELWS---LLAADSEKPI-ASLQVDSKFNDLDW 75
Query: 375 NRTEPLIVSGGDDGCIHVWDLR-RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+ +I D+G + ++ +S+A F +H++ V TV+++ + + ASGG +
Sbjct: 76 SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN 135
Query: 434 DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493
+I +WD+ + + + L + E+ L W+ L S +S
Sbjct: 136 GEIFIWDMN-----KCTESPSNYTPLTPGQSMSSVD--EVISLAWNQSLAHVFASAGSSN 188
Query: 494 FNIFRTIS--DLPSQLLFIHLGQKEIKELH--------WHPQLPGTIISTANSGFNIFRT 543
S DL ++ IHL WHP+ T ++TA +G + +
Sbjct: 189 -----FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK-NSTRVATA-TGSDNDPS 241
Query: 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTL 603
I + +L + + L ++G H+ I + C L
Sbjct: 242 ILIWDLRNANT-PLQTL----NQG------------------HQKGILSLDWCHQDEHLL 278
Query: 604 A-GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAM 662
G V +W+ ++ + L F F
Sbjct: 279 LSS--GRDNTVLLWNPES------------------AE-------QLSQFPARGNWCFKT 311
Query: 663 DWSSTEPGVLATGDCKRNIHIWTPREAGAWSV---------YLYTNRFGVLATGDCKRNI 713
++ P + A I + T + ++ F + + +
Sbjct: 312 KFAPEAPDLFACASFDNKIEVQT-LQNLTNTLDEQETETKQQESETDFWNNVSREESKEK 370
Query: 714 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 750
+A W +P W+ G K V
Sbjct: 371 PSVFHLQAPTWY--GEPSPAAH-------WAFGGKLV 398
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 3e-15
Identities = 37/297 (12%), Positives = 70/297 (23%), Gaps = 77/297 (25%)
Query: 155 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ- 213
NK + E ++ W+ + V A+ IW +
Sbjct: 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIH 203
Query: 214 -VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272
P G ++W + ++A
Sbjct: 204 LSYTSPNSGIKQQLSVVEWHP--------KNSTRVA------------------------ 231
Query: 273 TEGFAMDWSSTEPGVLATGDCK-RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331
ATG +I IW R A Q GH + L W +
Sbjct: 232 ---------------TATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQD 274
Query: 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCI 390
+ +L S D ++ +W+ + + P A + + L D I
Sbjct: 275 EHLLLSSGRDNTVLLWNP---ESAEQLSQFP-ARGNWCFKTKFAPEAPDLFACASFDNKI 330
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447
V + + + + + + W+ +S
Sbjct: 331 EVQT-------------------LQNLTNTL-DEQETETKQQESETDFWNNVSREES 367
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Length = 416 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-14
Identities = 49/436 (11%), Positives = 111/436 (25%), Gaps = 117/436 (26%)
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
++ +++ + + + +H ++S + + + D + +W L
Sbjct: 2 AMGSMVKLAE---FSRTATFAW---SHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAA 55
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458
+A+ + + ++W + A + + L+ EA
Sbjct: 56 DSEKPIASLQVDSK-FNDLDWSHN-NKIIAGALDNGSLELYSTN----------EANNAI 103
Query: 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIIS----------TANSGFNIFRTISDLPSQLL 508
H +K + ++ + + S N + L
Sbjct: 104 NSMARFSNHSS--SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161
Query: 509 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGS 568
+ E+ L W+ L S +S S+ +L + +E L
Sbjct: 162 MSSVD--EVISLAWNQSLAHVFASAGSSN-----FASIWDLKAKKE--VIHLSYTSP--- 209
Query: 569 GDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV--GKVGIWDLKTALQTVD 626
+ ++ V ST +A G + IWDL+ A +
Sbjct: 210 --------------NSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255
Query: 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686
Q GH ++DW + +L + + +W P
Sbjct: 256 TLNQ-----------------------GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292
Query: 687 REAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 746
+ + N +++P
Sbjct: 293 ------------------ESAEQLSQ------------------FPARGNWCFKTKFAPE 316
Query: 747 EKRVLASCSVDRSNRI 762
+ A S D +
Sbjct: 317 APDLFACASFDNKIEV 332
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 7e-28
Identities = 29/176 (16%), Positives = 64/176 (36%), Gaps = 10/176 (5%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
S +++W T P +A G +I +W + +G +++ +++
Sbjct: 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDY--DVQNKTSFIQGMGPGDAITGMKF 126
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGD 386
+ L S+ + + D + + ++ + + + ++ +G
Sbjct: 127 NQFNTNQLFVSSIRGATTLRD---FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS 183
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G + + L G + K H A VT E++P A+ D + LWDL
Sbjct: 184 TGRLLLLGLD----GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 2e-22
Identities = 26/181 (14%), Positives = 54/181 (29%), Gaps = 9/181 (4%)
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322
G M ++ L + + QV
Sbjct: 109 TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDF-SGSVIQVFA-KTDSWDYWY 166
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LI 381
+ S +++LA+ + + + H + V +N L+
Sbjct: 167 CCVDVSV-SRQMLATGDSTGRLLLLGLD---GH-EIFKEK-LHKAKVTHAEFNPRCDWLM 220
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ D + +WDLR K +S H PV ++PT+S+ + ++I ++
Sbjct: 221 ATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280
Query: 442 A 442
Sbjct: 281 Y 281
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-21
Identities = 45/306 (14%), Positives = 87/306 (28%), Gaps = 71/306 (23%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW 231
S +++W T P +A G +I +W + G ++ +++
Sbjct: 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDY--DVQNKTSFIQGMGPGDAITGMKF 126
Query: 232 S-------------------DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272
+ D ++ V
Sbjct: 127 NQFNTNQLFVSSIRGATTLRDFSGSVIQV-----------------------FAKTDSWD 163
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332
+D S + +LATGD + + ++ H V +++P
Sbjct: 164 YWYCCVDVSVS-RQMLATGDSTGRLLLLGLDGHEIFK-----EKLHKAKVTHAEFNPRCD 217
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN-RTEPLIVSGGDDGCIH 391
++A+ SVD ++++WD R I K+ + H VN +N +++ I
Sbjct: 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276
Query: 392 VWDLRRFKKGSSVATFKHHT------APVTTVEWHPTESSTFASGGADD---------QI 436
V+ S H WHP +G D I
Sbjct: 277 VYSS---YDWSKPDQIIIHPHRQFQHLTPIKATWHPMYD-LIVAGRYPDDQLLLNDKRTI 332
Query: 437 ALWDLA 442
++D
Sbjct: 333 DIYDAN 338
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-19
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 7/131 (5%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNV 371
+ V L+W P +A S I +WD + ++ + +
Sbjct: 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWD---YDVQNKTSFIQGMGPGDAITG 123
Query: 372 ISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+ +N+ + G + D A V+ + A+G
Sbjct: 124 MKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVS-RQMLATG 181
Query: 431 GADDQIALWDL 441
+ ++ L L
Sbjct: 182 DSTGRLLLLGL 192
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Query: 362 PNAHTSDVNVISWNRTEPLIVSGGDDGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
TS ++ I + I + + L K T VT++EW
Sbjct: 25 KVGQTSILHYIYKSSLGQSIHAQLRQCLQEPFIRSL---KSYKLHRTASPFDRRVTSLEW 81
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQ 451
HPT +T A G I LWD V+ + Q
Sbjct: 82 HPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ 113
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 5e-07
Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 23/153 (15%)
Query: 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318
+ H A ++ T+ L T D + I +++ + ++ H
Sbjct: 237 IKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK----PDQIIIH 292
Query: 319 TN------SVEDLQWSPGEKRVLASCSVDL--------SIRIWDTRVINTKSCMLTLPNA 364
+ + W P ++A D +I I+D N+ + L +
Sbjct: 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDA---NSGGLVHQLRDP 349
Query: 365 HTSD-VNVISWNRTEPLIVSGGDDGCIHVWDLR 396
+ + +++ ++ T ++ SG I +W+
Sbjct: 350 NAAGIISLNKFSPTGDVLASGMG-FNILIWNRE 381
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 7/60 (11%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A G +I +W + +G +++ ++++ L S+ + +
Sbjct: 88 TVAVGSKGGDIILWDY--DVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Length = 383 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 24/214 (11%), Positives = 54/214 (25%), Gaps = 46/214 (21%)
Query: 568 SGDEDR--------RKDPVMNSYFIRHRGCINRVRTCQYGSTTLA-GVWGEVGKVGIWDL 618
G + ++ + I ++ Q+ + L G + D
Sbjct: 91 VGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS--SIRGATTLRDF 148
Query: 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678
++ V +D S + +LATGD
Sbjct: 149 SGSVIQV-----------------------FAKTDSWDYWYCCVDVSVS-RQMLATGDST 184
Query: 679 RNIHIWTPREAGAWSVYLYTNRFG----------VLATGDCKRNIHIWTPREAGAWQVDQ 728
+ + + L+ + ++AT + +W R +
Sbjct: 185 GRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR-NIKDKNSY 243
Query: 729 KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ H V ++P + L + R+
Sbjct: 244 IAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-27
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 6/157 (3%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
T + ++ ++ W+ + H V + W+P R + +CS D + ++
Sbjct: 26 FVTTTATNQVELYE-QDGNGWKHAR-TFSDHDKIVTCVDWAPKSNR-IVTCSQDRNAYVY 82
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR-RFKKGSSVAT 406
+ R T L L + W+ E G I V S
Sbjct: 83 EKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHL 141
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
+ + + +++WHP + A+G AD + + V
Sbjct: 142 KRPLRSTILSLDWHPN-NVLLAAGCADRKAYVLSAYV 177
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 6e-22
Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 4/130 (3%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
+ ++ + + + +++ + N T + H V + W
Sbjct: 9 ILPKPSYEHAFNSQRTE-FVTTTATNQVELYE-QDGNGWKHARTF-SDHDKIVTCVDWAP 65
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
IV+ D +V++ R T V W P E FA G I
Sbjct: 66 KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVI 124
Query: 437 ALWDLAVERD 446
++ E D
Sbjct: 125 SVCYFEQEND 134
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 8e-22
Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 17/187 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ T RN +++ R G W+ L+ + ++WSP E + A S I +
Sbjct: 70 IVTCSQDRNAYVYEKRPDGTWKQ-TLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVC 127
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR---------- 397
N L S + + W+ L+ +G D +V
Sbjct: 128 YFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEAS 187
Query: 398 ----FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
++V V V + P+ + A G D + + +
Sbjct: 188 VWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYAGHDSSVTIAYPSAPEQPPRALIT 246
Query: 454 AELKDLP 460
+L LP
Sbjct: 247 VKLSQLP 253
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 39/272 (14%), Positives = 77/272 (28%), Gaps = 31/272 (11%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-----------DLKTALQT 240
A G R I + + W V + ++ L W D K + +
Sbjct: 115 FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174
Query: 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300
+ + G +P + + A+ +S + LA ++ I
Sbjct: 175 AYVR-DVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSG-NALAYAGHDSSVTIA 232
Query: 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT 360
P + + L W+ E ++A+ I +
Sbjct: 233 YPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPILLQGN------ESGWA 285
Query: 361 LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR-RFKKGSSVATFKH-------HTA 412
+ + S+ T ++G + LR F+ + + H
Sbjct: 286 HTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQN 345
Query: 413 PVTTV---EWHPTESSTFASGGADDQIALWDL 441
+ T+ P + F S G D ++ LW L
Sbjct: 346 MIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 1e-11
Identities = 41/277 (14%), Positives = 70/277 (25%), Gaps = 44/277 (15%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL------QTVDDPF 245
+ T RN +++ R G W+ L +A ++WS + + +
Sbjct: 70 IVTCSQDRNAYVYEKRPDGTWKQ-TLVLLRLNRAATFVRWSPNEDKFAVGSGARVI---- 124
Query: 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV-LATGDCKRNIHIWTPRE 304
+ ++ + ++DW V LA G R ++
Sbjct: 125 SVCYFEQENDWWVSKHL-----KRPLRSTILSLDWHPN--NVLLAAGCADRKAYVL---S 174
Query: 305 AGAWQVDQKP----------------LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
A VD KP V + +SP LA D S+ I
Sbjct: 175 AYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA-LAYAGHDSSVTIAY 233
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW----DLRRFKKGSSV 404
L + + W E IV+ G + + +
Sbjct: 234 PSAPEQPPRALITVKLSQLPLRSLLWA-NESAIVAAGYNYSPILLQGNESGWAHTRDLDA 292
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
T K E + DL
Sbjct: 293 GTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDL 329
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 12/84 (14%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
Query: 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424
++N V+ + +++ + TF H VT V+W P +S
Sbjct: 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYE-QDGNGWKHARTFSDHDKIVTCVDWAP-KS 67
Query: 425 STFASGGADDQIALWDLAVERDSE 448
+ + D +++ + +
Sbjct: 68 NRIVTCSQDRNAYVYEKRPDGTWK 91
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 21/104 (20%), Positives = 33/104 (31%), Gaps = 14/104 (13%)
Query: 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFG-------------VLATGDCKRNIHIWTP 718
+ T RN +++ R G W L R A G R I +
Sbjct: 70 IVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129
Query: 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ W V + +++ L W P LA+ DR +
Sbjct: 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCADRKAYV 172
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 377 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 24/166 (14%), Positives = 43/166 (25%), Gaps = 14/166 (8%)
Query: 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD----PF 245
LA ++ I P + L W++ + +
Sbjct: 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILL 277
Query: 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305
Q E + T SF+ G E G ++ + +
Sbjct: 278 QGNESGWAHTRDLDAGTSKT-SFTHTGNTG----EGREEEGPVSFTALRSTFRNMDLK-- 330
Query: 306 GAWQVDQKPLVGHTNSVEDLQW---SPGEKRVLASCSVDLSIRIWD 348
G+ Q H N + L+ +PG S D + +W
Sbjct: 331 GSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 3e-27
Identities = 53/259 (20%), Positives = 88/259 (33%), Gaps = 42/259 (16%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+GH + ++ W+ + G +LA G I + T G W+V +K HT
Sbjct: 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV-KKINNAHTIGCN 154
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
+ W+ +D P + KR
Sbjct: 155 AVSWAPAVVPGSLIDHPSGQKPNYIKR--------------------------------- 181
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP---GEKRVLASCSVDLSI 344
A+G C I +W E G W+ +Q L H++ V D+ W+P +ASCS D +
Sbjct: 182 FASGGCDNLIKLWKEEEDGQWKEEQ-KLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV 240
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
IW ++ + L + V +SW+ T ++ G D + +W
Sbjct: 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE---SVDGQW 297
Query: 405 ATFKHHTAPVTTVEWHPTE 423
+V TE
Sbjct: 298 VCISDVNKGQGSVSASVTE 316
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 43/203 (21%), Positives = 71/203 (34%), Gaps = 25/203 (12%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+GH + ++ W+ + G +LA G I + T G W+V +K HT
Sbjct: 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV-KKINNAHTIGCN 154
Query: 324 DLQWSP----------------GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
+ W+P + AS D I++W L AH+
Sbjct: 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSD 213
Query: 368 DVNVISW----NRTEPLIVSGGDDGCIHVWDLRRFKKGS-SVATFKHHTAPVTTVEWHPT 422
V ++W I S DG + +W + S V V W T
Sbjct: 214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSIT 273
Query: 423 ESSTFASGGADDQIALWDLAVER 445
++ A G D+++ LW +V+
Sbjct: 274 -ANILAVSGGDNKVTLWKESVDG 295
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-23
Identities = 44/184 (23%), Positives = 63/184 (34%), Gaps = 25/184 (13%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRI 346
LAT R++ I+ G + L GH V + W+ +LASCS D + I
Sbjct: 28 LATCSSDRSVKIFDV-RNGGQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85
Query: 347 WDTRVINTKSCMLTLP-NAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
W + + H S VN + W + ++ G DG I + +
Sbjct: 86 WRE---ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV 142
Query: 404 VATFKHHTAPVTTVEWHP----------------TESSTFASGGADDQIALWDLAVERDS 447
HT V W P FASGG D+ I LW +
Sbjct: 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW 202
Query: 448 EIEQ 451
+ EQ
Sbjct: 203 KEEQ 206
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 93.1 bits (232), Expect = 8e-21
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
H + + D Q R LA+CS D S++I+D R + + L H V
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTR-LATCSSDRSVKIFDVR-NGGQILIADL-RGHEGPVWQ 62
Query: 372 ISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES-STFA 428
++W ++ S D + +W H + V +V W P + A
Sbjct: 63 VAWAHPMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILA 121
Query: 429 SGGADDQIALWDLAVERDSEIEQ 451
G +D I+L E E+++
Sbjct: 122 CGSSDGAISLLTYTGEGQWEVKK 144
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 691 AWSVYLYTNRFG-VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 747
AW+ +G +LA+ D K + IW E G W+ GH +SV + W+P +
Sbjct: 64 AWA----HPMYGNILASCSYDRK--VIIWR-EENGTWEK-SHEHAGHDSSVNSVCWAPHD 115
Query: 748 K-RVLASCSVDRSNRI 762
+LA S D + +
Sbjct: 116 YGLILACGSSDGAISL 131
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Length = 316 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 21/133 (15%), Positives = 36/133 (27%), Gaps = 22/133 (16%)
Query: 650 FSFSGHLTEGFAMDWSSTEPGV--LATGDCKRNIHIWTPREAGAWSVYL----------- 696
++ + + A+G C I +W E G W
Sbjct: 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217
Query: 697 ------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKR 749
+A+ + IWT +A + K L + V + WS
Sbjct: 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA--N 275
Query: 750 VLASCSVDRSNRI 762
+LA D +
Sbjct: 276 ILAVSGGDNKVTL 288
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 7e-27
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 13/181 (7%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+ F H ++ T+P + +G + +W W ++Q GH + V
Sbjct: 89 KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNW--ENNWALEQ-TFEGHEHFVM 144
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI--SWNRTEPLI 381
+ ++P + AS +D ++++W + + TL VN + +P +
Sbjct: 145 CVAFNPKDPSTFASGCLDRTVKVWS---LGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
++ DD I +WD + S VAT + H + V+ +HP SG D + +W+
Sbjct: 202 ITASDDLTIKIWDY---QTKSCVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNS 257
Query: 442 A 442
+
Sbjct: 258 S 258
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-23
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 268 FSGHLTEGFAMD--WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325
F GH E F M ++ +P A+G R + +W G + G V +
Sbjct: 136 FEGH--EHFVMCVAFNPKDPSTFASGCLDRTVKVW---SLGQSTPNFTLTTGQERGVNYV 190
Query: 326 QWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+ P +K + + S DL+I+IWD TKSC+ TL H S+V+ ++ T P+I+SG
Sbjct: 191 DYYPLPDKPYMITASDDLTIKIWD---YQTKSCVATL-EGHMSNVSFAVFHPTLPIIISG 246
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
+DG + +W+ T + HPT + + G D+ + L +
Sbjct: 247 SEDGTLKIWNS---STYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303
Query: 445 R 445
Sbjct: 304 E 304
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 6e-22
Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 9/131 (6%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+K ++ V+ + + P E + + + IW+ T+ + ++ + V
Sbjct: 6 KKTFSNRSDRVKGIDFHPTEPW-VLTTLYSGRVEIWNYE---TQVEVRSI-QVTETPVRA 60
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
+ + I+ G DD I V++ G V F+ H + ++ HPT SG
Sbjct: 61 GKFIARKNWIIVGSDDFRIRVFNY---NTGEKVVDFEAHPDYIRSIAVHPT-KPYVLSGS 116
Query: 432 ADDQIALWDLA 442
D + LW+
Sbjct: 117 DDLTVKLWNWE 127
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} Length = 814 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 6e-05
Identities = 24/180 (13%), Positives = 39/180 (21%), Gaps = 26/180 (14%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSV 322
P S ++ + A+ I E Q K L
Sbjct: 305 PTLSLDPVGKLVWSGGKN-----AAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFP 359
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
+ L SP + V D I+ L N W
Sbjct: 360 QSLAHSPNGRFV-TVVG-DGEYVIYT---------ALAWRNKAFGKCQDFVWGPDSNSYA 408
Query: 383 SGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ G I + +K V ++ S +D + +D
Sbjct: 409 LIDETGQI-----KYYKNFKEVTSWSVPMHSAIDR----LFSGALLGVKSDGFVYFFDWD 459
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-27
Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 12/193 (6%)
Query: 258 PGIPTPPLFSFSGHLTEGF-AMDWSSTEPG-VLATGDCKRNIHIW---TPREAGAWQVDQ 312
PP+ F+GH + + +S + L +GD + +W +E+ + +V+
Sbjct: 49 GDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV 108
Query: 313 K-PLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
K + D+ W G + + D ++ + + + + H+ +N
Sbjct: 109 KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS---WDSGNSLGEV-SGHSQRIN 164
Query: 371 VISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
++ P ++ GDDG + + FK +S T + V VE+ P +
Sbjct: 165 ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 224
Query: 430 GGADDQIALWDLA 442
G+D +I+ +D
Sbjct: 225 VGSDRKISCFDGK 237
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 94.2 bits (235), Expect = 4e-20
Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 24/167 (14%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L G+ + + +V + SP E +A+ V I ++
Sbjct: 463 LEEGNTIQVFKLSDL------EVSFDLKTPLRAKPSYISISPSETY-IAAGDVMGKILLY 515
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWN----------RTEPLIVSGGDDGCIHVWDLRR 397
D ++ + TS +N ISW E L+ +G D I ++ ++
Sbjct: 516 DL---QSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK- 571
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
+ + H V + W ST S GAD I W++ +E
Sbjct: 572 -RPMKIIKALNAHKDGVNNLLWETP--STLVSSGADACIKRWNVVLE 615
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 92.7 bits (231), Expect = 1e-19
Identities = 45/295 (15%), Positives = 90/295 (30%), Gaps = 30/295 (10%)
Query: 162 PGIPTPPLFSFSGHLTEGF-AMDWSSTEPG-VLATGDCKRNIHIW---TPREAGAWQVDQ 216
PP+ F+GH + + +S + L +GD + +W +E+ + +V+
Sbjct: 49 GDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNV 108
Query: 217 K-PLGGHTNSAEDLQWS-DLKTALQTVDDPFQLAEH--NKKRGKGPGIPTPPLFSFSGHL 272
K D+ W + + L V + + G L SGH
Sbjct: 109 KSEFQVLAGPISDISWDFEGRR-LCVVGEGRDNFGVFISWDSGN-------SLGEVSGHS 160
Query: 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332
A + P T ++ + + + + V D+++SP
Sbjct: 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQG-PPFKFSASDRTHHKQGSFVRDVEFSPDSG 219
Query: 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGGDDGC 389
+ + D I +D + + + + V + + + G D
Sbjct: 220 EFVITVGSDRKISCFDGK---SGEFLKYI-EDDQEPVQGGIFALSWLDSQKFATVGADAT 275
Query: 390 IHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
I VWD+ V + V T + S D + ++L
Sbjct: 276 IRVWDV---TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELG 327
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 9e-19
Identities = 25/167 (14%), Positives = 54/167 (32%), Gaps = 23/167 (13%)
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
G A ++ I ++ + + + S L + L + +
Sbjct: 418 GFTAVLTNDDDLLIL---QSFTGDIIKSVRLNSPGSAVSLSQNYVAVG-LEEGNTIQVFK 473
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
+ D + T + + IS + +E I +G G I ++DL +
Sbjct: 474 LSDL---EVSFDLKTP---LRAKPSYISISPSETYIAAGDVMGKILLYDL---QSREVKT 524
Query: 406 T-FKHHTAPVTTVEWHP---------TESSTFASGGADDQIALWDLA 442
+ + T+ + + W P E A+G D I ++ +
Sbjct: 525 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 6e-18
Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 33/166 (19%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK--RVLASCSVDL 342
+ T R I + + K + V+ ++ + A+ D
Sbjct: 222 VITVGSDRKISCFDGKSGEF-------LKYIEDDQEPVQGGIFALSWLDSQKFATVGADA 274
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISW------NRTEPLIVSGGDDGCIHVWDLR 396
+IR+WD T C+ + N I+S DG ++ ++L
Sbjct: 275 TIRVWDVT---TSKCVQKWT-LDKQQLGNQQVGVVATGNGR---IISLSLDGTLNFYEL- 326
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ T H +T + +P SG D +I W +
Sbjct: 327 --GHDEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSS 365
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 5e-17
Identities = 42/283 (14%), Positives = 89/283 (31%), Gaps = 41/283 (14%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
L SGH A + P T ++ + + + +
Sbjct: 152 SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG-PPFKFSASDRTHHKQGSFVR 210
Query: 228 DLQWS-DLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS-ST 283
D+++S D + TV D + K G+ L ++ S
Sbjct: 211 DVEFSPDSGEFVITVGSDRKISC--FDGKSGE-------FLKYIEDDQEPVQGGIFALSW 261
Query: 284 EPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS---PGEKRVLASCS 339
AT I +W + + QK + + Q G R + S S
Sbjct: 262 LDSQKFATVGADATIRVW---DVTTSKCVQK-WTLDKQQLGNQQVGVVATGNGR-IISLS 316
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
+D ++ ++ + + T+ + H + ++ N ++SG DG I W
Sbjct: 317 LDGTLNFYE---LGHDEVLKTI-SGHNKGITALTVNP----LISGSYDGRIMEWSSSS-- 366
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H+ + +++ + ++S DD + + +
Sbjct: 367 ------MHQDHSNLIVSLDNSK--AQEYSSISWDDTLKVNGIT 401
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-14
Identities = 21/182 (11%), Positives = 46/182 (25%), Gaps = 41/182 (22%)
Query: 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSV 322
++ + +T G + + ++ + K + GH +
Sbjct: 290 WTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEV-------LKTISGHNKGI 342
Query: 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPL 380
L +P L S S D I W + ++ H++ + + +
Sbjct: 343 TALTVNP-----LISGSYDGRIMEWSSS---------SMHQDHSNLIVSLDNSKAQE--- 385
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
S D + V T + + A DD + +
Sbjct: 386 YSSISWDDTLKVNG----------ITKHEFGSQPKVASANN--DGFTAVLTNDDDLLILQ 433
Query: 441 LA 442
Sbjct: 434 SF 435
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-12
Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 11/135 (8%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
N L + P + C +R D ++ +S V + ++
Sbjct: 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVP-PVVQFTGHGSSVVTTVKFSP 74
Query: 377 TE--PLIVSGGDDGCIHVWDLR-----RFKKGSSVATFKHHTAPVTTVEWHPTESSTF-- 427
+ + SG + G + VW + + + F+ P++ + W E
Sbjct: 75 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCV 133
Query: 428 ASGGADDQIALWDLA 442
G D+
Sbjct: 134 VGEGRDNFGVFISWD 148
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 7e-08
Identities = 27/160 (16%), Positives = 42/160 (26%), Gaps = 54/160 (33%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251
+A GD I ++ + + +V T+ + W
Sbjct: 503 IAAGDVMGKILLY---DLQSREVKTSRWAFRTSKINAISWK------------------- 540
Query: 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAW 308
P L +ATG NI I+ P +
Sbjct: 541 ------PAEKGANEEEIEEDL---------------VATGSLDTNIFIYSVKRPMKII-- 577
Query: 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
K L H + V +L W L S D I+ W+
Sbjct: 578 ----KALNAHKDGVNNLLWETPST--LVSSGADACIKRWN 611
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Length = 615 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 5e-07
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 361 LPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFK-HHTAPVTTVE 418
P+ + +S++ T I + D K V F H ++ VTTV+
Sbjct: 13 QPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGD-SKVPPVVQFTGHGSSVVTTVK 71
Query: 419 WHPTESSTF-ASGGADDQIALWDLAVERDSEIEQREAELK 457
+ P + S + SG ++ +W D E E +K
Sbjct: 72 FSPIKGSQYLCSGDESGKVIVWG--WTFDKESNSVEVNVK 109
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-26
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336
+DWS+ + +RN+++W A + V + V ++WS L+
Sbjct: 98 LLDWSNLN---VVAVALERNVYVW---NADSGSVSALAETDESTYVASVKWSHDGSF-LS 150
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
+ + I+D + +++ + T+ H + V +SWNR ++ SG G IH D+R
Sbjct: 151 VGLGNGLVDIYD---VESQTKLRTM-AGHQARVGCLSWNRH--VLSSGSRSGAIHHHDVR 204
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ T + H++ V + W + ASGG D+ + +WD
Sbjct: 205 --IANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDAR 247
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-23
Identities = 60/286 (20%), Positives = 104/286 (36%), Gaps = 46/286 (16%)
Query: 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-DLKT-AL 238
+DWS+ + +RN+++W A + V + ++WS D ++
Sbjct: 98 LLDWSNLN---VVAVALERNVYVW---NADSGSVSALAETDESTYVASVKWSHDGSFLSV 151
Query: 239 QTVDDPFQL--AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 296
+ + E K L + +GH + W+ VL++G
Sbjct: 152 GLGNGLVDIYDVESQTK-----------LRTMAGHQARVGCLSWNRH---VLSSGSRSGA 197
Query: 297 IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
IH R A L GH++ V L W + LAS D ++IWD R +
Sbjct: 198 IHHHDVRIANHQ---IGTLQGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWDAR---SSI 250
Query: 357 CMLTLPNAHTSDVNVISWN---RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
T H + V ++W G D IH W+ G+ V T +
Sbjct: 251 PKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA---ATGARVNTVDAGSQ- 305
Query: 414 VTTVEWHPTESSTFAS--GGADDQIALWDLAVERDSEIEQREAELK 457
VT++ W P S S G D+ +++W + S ++ ++
Sbjct: 306 VTSLIWSPH-SKEIMSTHGFPDNNLSIWSYS----SSGLTKQVDIP 346
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 2e-15
Identities = 18/127 (14%), Positives = 47/127 (37%), Gaps = 10/127 (7%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
G + V + +++ ++ +W+ ++ S ++ V + W+
Sbjct: 89 GIIDDYYLNLLDWSNLNV-VAVALERNVYVWN---ADSGSVSALAETDESTYVASVKWSH 144
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
+ G +G + ++D+ + + + T H A V + W+ +SG I
Sbjct: 145 DGSFLSVGLGNGLVDIYDV---ESQTKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAI 198
Query: 437 ALWDLAV 443
D+ +
Sbjct: 199 HHHDVRI 205
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Length = 401 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 53/267 (19%), Positives = 86/267 (32%), Gaps = 53/267 (19%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
L + +GH + W+ VL++G IH R A L GH++
Sbjct: 168 KLRTMAGHQARVGCLSWNRH---VLSSGSRSGAIHHHDVRIANHQI---GTLQGHSSEVC 221
Query: 228 DLQWSDLKTALQTVDDPFQLAE---------HNKKRGKGPGIPTPPLFSFSGHLTEGFAM 278
L W D QLA + + P F+ + H A+
Sbjct: 222 GLAWRS---------DGLQLASGGNDNVVQIWDARSSI-------PKFTKTNHNAAVKAV 265
Query: 279 DWSSTEPGVLATG----DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334
W + +LATG D + IH W A G V L WSP K
Sbjct: 266 AWCPWQSNLLATGGGTMD--KQIHFW---NAATGARVNTVDAGS--QVTSLIWSPHSKE- 317
Query: 335 LASC--SVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
+ S D ++ IW ++ + AH + V + + ++ + D +
Sbjct: 318 IMSTHGFPDNNLSIWSY---SSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK 374
Query: 392 VWDLRRFKKGSSVAT-FKHHTAPVTTV 417
W + G V P +++
Sbjct: 375 FWRV---YDGDHVKRPIPITKTPSSSI 398
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 5e-26
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
A+ I ++ + G ++ D V H+ SV L WSP + +AS S D +I
Sbjct: 205 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-IASASADKTI 263
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
+IW+ + T T+P + + T+ +VS +G I+ + GS
Sbjct: 264 KIWN---VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE---LGSID 317
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H +T + + T S A+ I WD++
Sbjct: 318 QVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS 354
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-23
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS--VDLSIR 345
A+GD N+ IW + + + + V+D+ W KR +A+ +
Sbjct: 74 CASGDVHGNVRIWDT--TQTTHILKTTIPVFSGPVKDISWDSESKR-IAAVGEGRERFGH 130
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL-IVSGGDDGCIHVWDLRRFKKGSSV 404
++ +T + L +N + + + P I+SG DD + +++ FK
Sbjct: 131 VFL---FDTGTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK---FK 183
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+TF HT V +V ++P + S FAS G D I L++
Sbjct: 184 STFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGV 220
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-22
Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 11/156 (7%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A G +H++ + V + + H + + +S L + + +
Sbjct: 463 VAVGGQDSKVHVY---KLSGASVSEVKTIVHPAEITSVAFSNNGAF-LVATDQSRKVIPY 518
Query: 348 DTRVINTKSCMLTLP--NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
+ HT+ V +SW+ + +G D + VW++ + +
Sbjct: 519 SVA---NNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK-PSDHPII 574
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
H +T S G D I W++
Sbjct: 575 IKGAHAMSSVNSVIWL-NETTIVSAGQDSNIKFWNV 609
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-22
Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 17/159 (10%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
G + + + D + H++ + SP AS V ++RI
Sbjct: 34 QYCNGTSVYTVPVGSLT-------DTEIYTEHSHQTTVAKTSPSGYY-CASGDVHGNVRI 85
Query: 347 WDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSS 403
WDT + +L + V ISW+ I + G+ + HV+ G+S
Sbjct: 86 WDT---TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLF---DTGTS 139
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ +V++ P+ SG D+ +A+++
Sbjct: 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGP 178
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-22
Identities = 37/270 (13%), Positives = 75/270 (27%), Gaps = 50/270 (18%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-------------DLKTAL 238
A+GD N+ IW + + + + +D+ W + +
Sbjct: 74 CASGDVHGNVRIWDT--TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131
Query: 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298
D +G ++D+ + P + +G +
Sbjct: 132 FLFDTGTSNGN------------------LTGQARAMNSVDFKPSRPFRIISGSDDNTVA 173
Query: 299 IW--TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT---RVIN 353
I+ P + HT V ++++P AS D +I +++
Sbjct: 174 IFEGPPFKFK------STFGEHTKFVHSVRYNPDGSL-FASTGGDGTIVLYNGVDGTKTG 226
Query: 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTA 412
AH+ V ++W+ I S D I +W++ T
Sbjct: 227 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV---ATLKVEKTIPVGTRI 283
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ T S A+ I +
Sbjct: 284 EDQQLGIIWT-KQALVSISANGFINFVNPE 312
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 3e-22
Identities = 34/259 (13%), Positives = 94/259 (36%), Gaps = 39/259 (15%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-DLKTA-------LQTVDD 243
L + D + +I+ W + ++ H ++ + L+ V
Sbjct: 339 LFSADAEGHINSW---DISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPA 395
Query: 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303
G G + ++ + S+ G +A C ++I I++
Sbjct: 396 G----------GSGVDSSKAVA---NKLSSQPLGLAVSAD--GDIAVAACYKHIAIYS-- 438
Query: 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
++ + P+ +++ V S ++ +A D + ++ ++ S
Sbjct: 439 ---HGKLTEVPISYNSSCV---ALSNDKQF-VAVGGQDSKVHVYK---LSGASVSEVKTI 488
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
H +++ ++++ +V+ + + + + + ++ HTA V V W P +
Sbjct: 489 VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP-D 547
Query: 424 SSTFASGGADDQIALWDLA 442
+ A+G D+ + +W++
Sbjct: 548 NVRLATGSLDNSVIVWNMN 566
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 4e-22
Identities = 45/322 (13%), Positives = 90/322 (27%), Gaps = 65/322 (20%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--TPREAGAWQVDQKPLGGHTNS 225
+ +G ++D+ + P + +G + I+ P + G HT
Sbjct: 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK------STFGEHTKF 192
Query: 226 AEDLQWS------------------DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267
++++ + G G+
Sbjct: 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVD------------------GTKTGVFEDDSLK 234
Query: 268 FSGHLTEGFAMDWS---STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
H F + WS + +A+ + I IW +V++ VG +
Sbjct: 235 NVAHSGSVFGLTWSPDGTK----IASASADKTIKIW---NVATLKVEKTIPVGTRIEDQQ 287
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
L ++ L S S + I + S H + +S + + S
Sbjct: 288 LGIIWTKQA-LVSISANGFINFVNP---ELGSIDQVR-YGHNKAITALSSSADGKTLFSA 342
Query: 385 GDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
+G I+ WD+ G S F H +T ++ + DD + +
Sbjct: 343 DAEGHINSWDI---STGISNRVFPDVHATMITGIKTTS--KGDLFTVSWDDHLKVVPAGG 397
Query: 444 ERDSEIEQREAELKDLPSQLLF 465
+ +L P L
Sbjct: 398 SGVDSSKAVANKLSSQPLGLAV 419
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 74.5 bits (184), Expect = 6e-14
Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 12/129 (9%)
Query: 317 GHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375
+ L +P G+K + + ++ + T H+ V +
Sbjct: 16 TARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEI----YT---EHSHQTTVAKTS 68
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
+ SG G + +WD + T + PV + W ES A+ G +
Sbjct: 69 PSGYYCASGDVHGNVRIWDTTQ-TTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRE 126
Query: 436 --IALWDLA 442
++
Sbjct: 127 RFGHVFLFD 135
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 4e-05
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 20/104 (19%)
Query: 671 VLATGDCKRNIHIWTPR--------EAGAWSVYLYTNRF---G-VLATGDCKRNIHIWTP 718
G + + + + G A+GD N+ IW
Sbjct: 34 QYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVA-----KTSPSGYYCASGDVHGNVRIWDT 88
Query: 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ + + + V+D+ W KR +A+ R
Sbjct: 89 --TQTTHILKTTIPVFSGPVKDISWDSESKR-IAAVGEGRERFG 129
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-05
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
L D R + ++ HT V + WSP R LA+ S+D S +
Sbjct: 506 LVATDQSRKVIPYSV-ANNFELAHTNSWTFHTAKVACVSWSPDNVR-LATGSLDNSVIV 562
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Length = 611 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-----------EAGAWSVYL 696
+ +G ++D+ + P + +G + I+ SV
Sbjct: 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSV-- 196
Query: 697 YTNRF----GVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 749
R+ + A+ I ++ + G ++ D V H+ SV L WSP +
Sbjct: 197 ---RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 253
Query: 750 VLASCSVDRSNRI 762
+AS S D++ +I
Sbjct: 254 -IASASADKTIKI 265
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 52/288 (18%), Positives = 91/288 (31%), Gaps = 45/288 (15%)
Query: 184 WSSTEPG-VLATG--DCKRNIHIW-----TPREAGAWQVDQKPLGGHTNSAEDLQW---- 231
W+S E G ++A+ D + +W +G L S +++
Sbjct: 65 WASPEYGRIIASASYDKT--VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH 122
Query: 232 --------SDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS- 281
+ L +P L + HL F + W
Sbjct: 123 LGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS-----IPPANHLQSDFCLSWCP 177
Query: 282 -STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV---LAS 337
P LA ++ I + G V L GH + + + W+P R +A+
Sbjct: 178 SRFSPEKLAVSALEQAIIYQRG-KDGKLHVAA-KLPGHKSLIRSISWAPSIGRWYQLIAT 235
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGC-IHVWD 394
D IRI+ I K L S N ++ + + G D +
Sbjct: 236 GCKDGRIRIFK---ITEKLSPLAS---EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAE 289
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
L+ + ++ H V +V W+ T + +S G D ++ LW
Sbjct: 290 LQSNLQVELLSEHDDHNGEVWSVSWNLT-GTILSSAGDDGKVRLWKAT 336
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 4e-21
Identities = 25/176 (14%), Positives = 57/176 (32%), Gaps = 22/176 (12%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRI 346
+AT ++I ++ + + H +S+ + W+ E R++AS S D ++++
Sbjct: 26 VATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85
Query: 347 WDT------RVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLR-- 396
W+ + + TL N + + + + G+DG + ++D
Sbjct: 86 WEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144
Query: 397 --------RFKKGSSVATFKHHTAPVTTVEWHP--TESSTFASGGADDQIALWDLA 442
+ +H + W P A + I
Sbjct: 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK 200
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 6e-20
Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 12/141 (8%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV-INTKSCMLTLPNAHTSDVN 370
Q GH + V D+ + + +A+CS D I+++ + + AH S +
Sbjct: 4 QPFDSGHDDLVHDVVYDFYGRH-VATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSSIV 61
Query: 371 VISWNRTEP--LIVSGGDDGCIHVWD------LRRFKKGSSVATFKHHTAPVTTVEWHPT 422
I W E +I S D + +W+ ++ + + T + +V++ P
Sbjct: 62 AIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPA 121
Query: 423 ES-STFASGGADDQIALWDLA 442
A G D + L+D
Sbjct: 122 HLGLKLACLGNDGILRLYDAL 142
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-13
Identities = 37/248 (14%), Positives = 63/248 (25%), Gaps = 65/248 (26%)
Query: 170 FSFSGHLTEGFAMDWS--STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+ HL F + W P LA ++ I + G V L GH +
Sbjct: 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG-KDGKLHVAA-KLPGHKSLIR 218
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
+ W+ P L
Sbjct: 219 SISWA-------------------------------PSIGRWYQL--------------- 232
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE--DLQWSPGEKRV---LASCSVDL 342
+ATG I I+ E PL + S + + +
Sbjct: 233 IATGCKDGRIRIFKITEK------LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEE 286
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+ + + H +V +SWN T ++ S GDDG + +W +
Sbjct: 287 KAELQSNL---QVELLSEH-DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342
Query: 403 SVATFKHH 410
++
Sbjct: 343 CMSVITAQ 350
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 25/182 (13%), Positives = 50/182 (27%), Gaps = 48/182 (26%)
Query: 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670
V +W+ + + G L + + +++ ++ G
Sbjct: 81 KTVKLWEEDPDQE----------------ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG 124
Query: 671 -VLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV-------------------------- 703
LA + ++ E + T+ V
Sbjct: 125 LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK 184
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV---LASCSVDRSN 760
LA ++ I + G V L GH + + + W+P R +A+ D
Sbjct: 185 LAVSALEQAIIYQRG-KDGKLHVAA-KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242
Query: 761 RI 762
RI
Sbjct: 243 RI 244
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 6e-04
Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDRSNRI 762
+AT ++I ++ + + H +S+ + W+ E R++AS S D++ ++
Sbjct: 26 VATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Length = 351 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 10/68 (14%)
Query: 703 VLATG--DCKRNIHIW-----TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASC 754
++A+ D + +W +G L S+ ++++P LA
Sbjct: 73 IIASASYDKT--VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL 130
Query: 755 SVDRSNRI 762
D R+
Sbjct: 131 GNDGILRL 138
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 6e-26
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+ IW + ++ L GH N V+ + W+P LA+CS D S+ +W
Sbjct: 76 LASASFDATTCIWK-KNQDDFECVT-TLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVW 132
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ + C+ L N+HT DV + W+ ++ L+ S D + ++ AT
Sbjct: 133 EVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE-DDWVCCATL 190
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458
+ H + V ++ + P AS D + +W + + +
Sbjct: 191 EGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPS 240
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 6e-26
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 21/173 (12%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+ + ++ E W L GH ++V L + P +R LASCS D ++RIW
Sbjct: 165 LASASYDDTVKLYRE-EEDDWVC-CATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRIW 221
Query: 348 DTRVINTKS------------CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD- 394
+ + C+ TL H+ + I+W + + + D I V+
Sbjct: 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281
Query: 395 -----LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
++ + + H+ V V W+P E AS D ++A W
Sbjct: 282 DPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 2e-24
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+ R I IW E +W GH +V + WSP LAS S D + IW
Sbjct: 31 LASCGGDRRIRIWGT-EGDSWICKSVLSEGHQRTVRKVAWSPCGNY-LASASFDATTCIW 88
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ C+ TL H ++V ++W + L+ + D + VW++ + V+
Sbjct: 89 KKNQ-DDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL 146
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
HT V V WHP++ AS DD + L+
Sbjct: 147 NSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREE 180
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 91.1 bits (227), Expect = 7e-20
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 313 KPLVGHTNS-VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ H +S L W+P LASC D IRIW T ++ C L H V
Sbjct: 9 GRVPAHPDSRCWFLAWNPAGTL-LASCGGDRRIRIWGTE-GDSWICKSVLSEGHQRTVRK 66
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
++W+ + S D +W + V T + H V +V W P+ + A+
Sbjct: 67 VAWSPCGNYLASASFDATTCIWKKNQ-DDFECVTTLEGHENEVKSVAWAPS-GNLLATCS 124
Query: 432 ADDQIALWDLAVERDSEI 449
D + +W++ E + E
Sbjct: 125 RDKSVWVWEVDEEDEYEC 142
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 59.9 bits (146), Expect = 1e-09
Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 1/90 (1%)
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
++ + +P S ++WN L+ S G D I +W + H
Sbjct: 3 DSLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQR 62
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLA 442
V V W P + AS D +W
Sbjct: 63 TVRKVAWSP-CGNYLASASFDATTCIWKKN 91
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 2e-09
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 8/79 (10%)
Query: 288 LATGDCKRNIHIW-----TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
LAT I ++ + + + + H+ V + W+P E +LASCS D
Sbjct: 267 LATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326
Query: 343 SIRIWDTRVINTKSCMLTL 361
+ W +
Sbjct: 327 EVAFWK---YQRPEGLHHH 342
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 704 LATGDCKRNIHIW-----TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDR 758
LAT I ++ + + + + H+ V + W+P E +LASCS D
Sbjct: 267 LATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326
Query: 759 SNRI 762
Sbjct: 327 EVAF 330
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
LA+ IW + ++ L GH N V+ + W+P LA+CS D+S +
Sbjct: 76 LASASFDATTCIWK-KNQDDFECVT-TLEGHENEVKSVAWAPSGNL-LATCSRDKSVWV 131
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-26
Identities = 34/158 (21%), Positives = 54/158 (34%), Gaps = 16/158 (10%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L + + + H SVE +QW P + + S S D ++++W
Sbjct: 73 LENSSRQS-----YYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVW 127
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWN---RTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
DT NT V + L+ G + + DL K GS
Sbjct: 128 DT---NTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL---KSGSCS 179
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H + V W P A+ AD ++ LWD+
Sbjct: 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVR 217
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 3e-19
Identities = 36/191 (18%), Positives = 55/191 (28%), Gaps = 37/191 (19%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
G L+ A +P L + + E D+ H + L P
Sbjct: 3 GFLS---ARQTGLEDPLRLRRAE--STRRVLGL-ELNK---DRDVERIHGGGINTLDIEP 53
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTL------------PNAHTSDVNVISWNRT 377
E R + S D I ++D + S P+ H V + W
Sbjct: 54 VEGRYMLSGGSDGVIVLYD---LENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY-- 108
Query: 378 EP----LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP--TESSTFASGG 431
P + S D + VWD + F V + P T+ A G
Sbjct: 109 -PHDTGMFTSSSFDKTLKVWDT---NTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT 163
Query: 432 ADDQIALWDLA 442
++ L DL
Sbjct: 164 RGPKVQLCDLK 174
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-18
Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 35/196 (17%)
Query: 270 GHLTEGFAMDWS--STEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVED 324
++ S ST+ ++A G + + + L GH +
Sbjct: 139 NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-------SHILQGHRQEILA 191
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN--------------AHTSDVN 370
+ WSP +LA+ S D +++WD R C++TL AH VN
Sbjct: 192 VSWSPRYDYILATASADSRVKLWDVR--RASGCLITLDQHNGKKSQAVESANTAHNGKVN 249
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF--- 427
+ + +++ G D + +W+ G + + T S
Sbjct: 250 GLCFTSDGLHLLTVGTDNRMRLWNS---SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSE 306
Query: 428 -ASGGADDQIALWDLA 442
IA++ +
Sbjct: 307 FVFVPYGSTIAVYTVY 322
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-12
Identities = 14/130 (10%), Positives = 29/130 (22%), Gaps = 13/130 (10%)
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
++ +I ++ + + L H V+
Sbjct: 287 VCNNSKKGLKFTVSCGCSSE-FVFVPYGSTIAVYTVY---SGEQITML-KGHYKTVDCCV 341
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+ + SG D I W S T + +P S +
Sbjct: 342 FQSNFQELYSGSRDCNILAWVP------SLYEPVPDDDETTTKSQLNPA-FEDAWSSSDE 394
Query: 434 DQ-IALWDLA 442
+ + W
Sbjct: 395 EGGTSAWSHP 404
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-10
Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 9/89 (10%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L GH +V+ + + L S S D +I W + +
Sbjct: 328 TMLKGHYKTVDCCVFQSNFQE-LYSGSRDCNILAWV---PSLYEPV----PDDDETTTKS 379
Query: 373 SWNRTEPLIVSG-GDDGCIHVWDLRRFKK 400
N S ++G W +F+K
Sbjct: 380 QLNPAFEDAWSSSDEEGGTSAWSHPQFEK 408
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Length = 408 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 7/62 (11%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L +G NI W P +P+ + Q +P + +S + W
Sbjct: 349 LYSGSRDCNILAWVPSL-------YEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAW 401
Query: 348 DT 349
Sbjct: 402 SH 403
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-25
Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
Query: 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG--DCKRNIHI 299
F + K +P GH + W V+A+G DC + +
Sbjct: 56 GGAFLVLPLGKTGRVDKNVPL-----VCGHTAPVLDIAWCPHNDNVIASGSEDCT--VMV 108
Query: 300 WTPREAGAWQVDQKP---LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356
W + G ++P L GHT V + W P + VL S D I +WD + T +
Sbjct: 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD---VGTGA 165
Query: 357 CMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-FKHHT-AP 413
+LTL + H + + W+R LI + D + V + R KG+ VA + H
Sbjct: 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR---KGTVVAEKDRPHEGTR 222
Query: 414 VTTVEWHPTESSTFASGGA---DDQIALWD 440
+ E +G + + Q+ALWD
Sbjct: 223 PVHAVFVS-EGKILTTGFSRMSERQVALWD 251
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-24
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
A+G + + G + + GHT V D+ W P V+AS S D ++ +
Sbjct: 51 CEASGGGAFLVLPLG--KTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMV 108
Query: 347 WD----TRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKG 401
W+ V+ + ++TL HT V +++W+ T + +++S G D I VWD+ G
Sbjct: 109 WEIPDGGLVLPLREPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV---GTG 164
Query: 402 SSVATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWD 440
++V T H + +V+W + + + D ++ + +
Sbjct: 165 AAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIE 204
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 1e-19
Identities = 40/267 (14%), Positives = 82/267 (30%), Gaps = 34/267 (12%)
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA-- 248
A+G + + G + + GHT D+ W + +A
Sbjct: 51 CEASGGGAFLVLPLG--KTGRVDKNVPLVCGHTAPVLDIAWCP--------HNDNVIASG 100
Query: 249 -EHNKKR------GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301
E G P+ + GH + W T VL + C I +W
Sbjct: 101 SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160
Query: 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL 361
GA V H +++ + WS + + D +R+ + R + +
Sbjct: 161 V-GTGA-AVLTLGPDVHPDTIYSVDWSRDGAL-ICTSCRDKRVRVIEPR---KGTVVAEK 214
Query: 362 PNAHTSDVNV-ISWNRTEPLIVSGGD---DGCIHVWDLRRFKKGSSVATFKH--HTAPVT 415
H V + ++ +G + + +WD + + + ++ V
Sbjct: 215 DRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK---HLEEPLSLQELDTSSGVL 271
Query: 416 TVEWHPTESSTFASGGADDQIALWDLA 442
+ P + + G D I +++
Sbjct: 272 LPFFDPDTNIVYLCGKGDSSIRYFEIT 298
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 14/135 (10%)
Query: 350 RVINTKSCMLTLPNAHTS-DVNVISWN---RTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
+ C + + T+ D + N SGG + + + +V
Sbjct: 17 QPAKADQCYEDVRVSQTTWDSGFCAVNPKFMALICEASGGGAFLVLPLG-KTGRVDKNVP 75
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF 465
HTAPV + W P + ASG D + +W++ D + E P L
Sbjct: 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP---DGGLVLPLRE----PVITLE 128
Query: 466 IHLGQKEIKELHWHP 480
H K + + WHP
Sbjct: 129 GH--TKRVGIVAWHP 141
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 1e-07
Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 18/166 (10%)
Query: 287 VLATGDCK---RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343
+L TG + R + +W + + + ++ V + P V D S
Sbjct: 234 ILTTGFSRMSERQVALWDTKHLE--EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS 291
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNV--ISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
IR ++ I +++ L + +S + + + L V+ + + L K
Sbjct: 292 IRYFE---ITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARF--YKLHERKCE 346
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFAS------GGADDQIALWDL 441
T + + PT A GG D L L
Sbjct: 347 PIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISL 392
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 8e-05
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
A+G + + G + + GHT V D+ W P V+AS S D + +
Sbjct: 51 CEASGGGAFLVLPLG--KTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMV 108
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Length = 402 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 703 VLATG--DCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVEDLQWSPGEKRVLASCSVD 757
V+A+G DC + +W + G ++P L GHT V + W P + VL S D
Sbjct: 96 VIASGSEDCT--VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153
Query: 758 RSNRI 762
+
Sbjct: 154 NVILV 158
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 3e-25
Identities = 53/277 (19%), Positives = 89/277 (32%), Gaps = 48/277 (17%)
Query: 192 LATGDCKRNIHIW---TPREAGAWQVDQKPLGGHTNSAEDLQWS-----------DLKTA 237
LA G + IW + + GH N + + WS D K+
Sbjct: 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-KSV 131
Query: 238 ----LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC 293
+ ++ + H + + W +E +LA+
Sbjct: 132 WIWETDESGEEYEC-----------------ISVLQEHSQDVKHVIWHPSE-ALLASSSY 173
Query: 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVI 352
+ IW W+ L GH +V + L S S D ++R+W
Sbjct: 174 DDTVRIWKD-YDDDWECVA-VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231
Query: 353 N-----TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK-KGSSVAT 406
+ C LP+ H V ++W LI S G DG + V++ + K +
Sbjct: 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRA 290
Query: 407 FKHHTAPVTTVEWH-PTESSTFASGGADDQIALWDLA 442
H + V+W + A+GG D + W L
Sbjct: 291 LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 66/290 (22%), Positives = 103/290 (35%), Gaps = 37/290 (12%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S + + ++ D+S G+LATG R I + + + +D H + +
Sbjct: 9 SLKLYKEKIWSFDFS---QGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVA 65
Query: 231 WS-DLKTAL-----QTV---DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 281
W TV K+ L GH E + WS
Sbjct: 66 WRPHTSLLAAGSFDSTVSIWA---------KEESADRTFEMDLLAIIEGHENEVKGVAWS 116
Query: 282 STEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ G LAT +++ IW E+G L H+ V+ + W P E LAS S
Sbjct: 117 ND--GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEAL-LASSSY 173
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDL--- 395
D ++RIW + C+ L N H V +++ + SG DD + VW
Sbjct: 174 DDTVRIWKDY-DDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231
Query: 396 --RRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
++ A H V V W AS GAD +A+++
Sbjct: 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEV 279
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 8e-20
Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 10/135 (7%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKSCMLTLPNAHTSDVNV 371
K L + + +S +LA+ S D I++ + + T +L AH +
Sbjct: 8 KSLKLYKEKIWSFDFSQ---GILATGSTDRKIKLVSVKYDDFTLIDVLDE-TAHKKAIRS 63
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDL----RRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
++W L+ +G D + +W R + +A + H V V W
Sbjct: 64 VAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND-GYYL 122
Query: 428 ASGGADDQIALWDLA 442
A+ D + +W+
Sbjct: 123 ATCSRDKSVWIWETD 137
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 3e-04
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDRSNRI 762
LA+ + IW W+ L GH +V + L S S D + R+
Sbjct: 168 LASSSYDDTVRIWKD-YDDDWECVA-VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRV 225
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Length = 330 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 704 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSN 760
LA G + IW + + GH N V+ + WS LA+CS D+S
Sbjct: 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSV 131
Query: 761 RI 762
I
Sbjct: 132 WI 133
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 7e-25
Identities = 45/280 (16%), Positives = 74/280 (26%), Gaps = 60/280 (21%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+ + H ++ W+ E G +L + + +E G + H
Sbjct: 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVN 151
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
W+ P + E + G
Sbjct: 152 SASWA-----------PATIEEDGEHNGTKES--------------------------RK 174
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIR 345
TG + IW V + L GH++ V D+ WSP + LAS S D +
Sbjct: 175 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 234
Query: 346 IWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
IW TL + SW+ + ++ G D + +W
Sbjct: 235 IWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK--------- 284
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443
+ P V SGG +D
Sbjct: 285 -ENLEGKWEPAGEV-----HQGGGGSGGGGATSKEFDGPC 318
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 8e-24
Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 26/192 (13%)
Query: 280 WSSTEPG-VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVL 335
W+ + G +LA+ D K + IW +E H+ SV +QW+P E +L
Sbjct: 63 WAHPKFGTILASCSYDGK--VLIW--KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL 118
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-------------LIV 382
S D + + + + N + + + +AH VN SW V
Sbjct: 119 LVASSDGKVSVVEFKE-NGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 176
Query: 383 SGGDDGCIHVWDLRR-FKKGSSVATFKHHTAPVTTVEWHP--TESSTFASGGADDQIALW 439
+GG D + +W + +T + H+ V V W P S AS D +W
Sbjct: 177 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236
Query: 440 DLAVERDSEIEQ 451
E+ +
Sbjct: 237 TQDNEQGPWKKT 248
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 3e-21
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 20/170 (11%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRI 346
LAT + I I+ E ++ L GH V + W+ + +LASCS D + I
Sbjct: 26 LATCSSDKTIKIFE-VEGETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
W S + H++ VN + W + PL++ DG + V + + +S
Sbjct: 84 WKEEN-GRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE-NGTTSP 140
Query: 405 ATFKHHTAPVTTVEWHPTESS------------TFASGGADDQIALWDLA 442
H V + W P F +GGAD+ + +W
Sbjct: 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 190
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-20
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
H + D KR LA+CS D +I+I++ T + TL H V + W
Sbjct: 7 ANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVE-GETHKLIDTL-TGHEGPVWRVDW 63
Query: 375 NRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES-STFASGG 431
+ ++ S DG + +W + S +A H+A V +V+W P E
Sbjct: 64 AHPKFGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS 122
Query: 432 ADDQIALWDLA 442
+D ++++ +
Sbjct: 123 SDGKVSVVEFK 133
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 5e-14
Identities = 41/294 (13%), Positives = 72/294 (24%), Gaps = 70/294 (23%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S++ E + E TG + IW V + L GH++ D+
Sbjct: 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS LA+
Sbjct: 214 WS-----------------PTVLLRS------------------------------YLAS 226
Query: 291 GDCKRNIHIWTPR-EAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWD 348
R IWT E G W+ + + WS G VLA D + +W
Sbjct: 227 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTLWK 284
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
+ + H SGG +D + +
Sbjct: 285 ENLEGKWEPAGEV---HQGGG------------GSGGGGATSKEFDG---PCQNEIDLLF 326
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ 462
+ F + + + + + +D + + +K LP++
Sbjct: 327 SECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTKDI-VGKSGVSIKRLPTE 379
|
| >3jrp_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Length = 379 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-06
Identities = 35/180 (19%), Positives = 54/180 (30%), Gaps = 51/180 (28%)
Query: 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670
GKV IW + G+ I + H ++ W+ E G
Sbjct: 79 GKVLIWKEEN------------------GRWSQIAV-----HAVHSASVNSVQWAPHEYG 115
Query: 671 -VLATGDCKRNIHIWTPREAG-----------------AWSVYLYTNRFGV--------L 704
+L + + +E G +W+
Sbjct: 116 PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175
Query: 705 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDRSNRI 762
TG + IW V + L GH++ V D+ WSP + LAS S DR+ I
Sbjct: 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 8e-25
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 26/205 (12%)
Query: 267 SFSGHLTEGFAMDWSSTEPG-VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+ +GH + +DW+ + G +LA+ D K + IW +E H+ SV
Sbjct: 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGK--VMIW--KEENGRWSQIAVHAVHSASVN 103
Query: 324 DLQWSPGEK-RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--- 379
+QW+P E +L S D + + + + T + + +AH VN SW
Sbjct: 104 SVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-SPIII-DAHAIGVNSASWAPATIEED 161
Query: 380 ----------LIVSGGDDGCIHVWDLRR-FKKGSSVATFKHHTAPVTTVEWHP--TESST 426
V+GG D + +W + +T + H+ V V W P S
Sbjct: 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221
Query: 427 FASGGADDQIALWDLAVERDSEIEQ 451
AS D +W E+ +
Sbjct: 222 MASVSQDRTCIIWTQDNEQGPWKKT 246
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-21
Identities = 46/283 (16%), Positives = 86/283 (30%), Gaps = 50/283 (17%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAE 249
+AT + I I+ E ++ L GH + W+ F LA
Sbjct: 24 MATCSSDKTIKIFE-VEGETHKL-IDTLTGHEGPVWRVDWAH---------PKFGTILAS 72
Query: 250 ---------HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHI 299
++ G+ I + H ++ W+ E G +L + +
Sbjct: 73 CSYDGKVMIWKEENGRWSQIAV-----HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127
Query: 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK------------RVLASCSVDLSIRIW 347
+E G + H V W+P R + D ++IW
Sbjct: 128 VEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185
Query: 348 DTRV-INTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGGDDGCIHVWDL--RRFKKG 401
T TL H+ V ++W+ T + S D +W +
Sbjct: 186 KYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWK 244
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
++ + + W + + A G D+++ LW +E
Sbjct: 245 KTLLKEEKFPDVLWRASWSLS-GNVLALSGGDNKVTLWKENLE 286
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 4e-21
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
H + D KR +A+CS D +I+I++ T + TL H V + W
Sbjct: 5 ANAHNEMIHDAVMDYYGKR-MATCSSDKTIKIFEVEG-ETHKLIDTL-TGHEGPVWRVDW 61
Query: 375 NRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES-STFASGG 431
+ ++ S DG + +W + S +A H+A V +V+W P E
Sbjct: 62 AHPKFGTILASCSYDGKVMIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS 120
Query: 432 ADDQIALWDLA 442
+D ++++ +
Sbjct: 121 SDGKVSVVEFK 131
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 4e-20
Identities = 38/231 (16%), Positives = 66/231 (28%), Gaps = 45/231 (19%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+ + H ++ W+ E G +L + + +E G + H
Sbjct: 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVN 149
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
W+ P + E + G
Sbjct: 150 SASWA-----------PATIEEDGEHNGTKES--------------------------RK 172
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIR 345
TG + IW V + L GH++ V D+ WSP + +AS S D +
Sbjct: 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232
Query: 346 IWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
IW TL + SW+ + ++ G D + +W
Sbjct: 233 IWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 29/193 (15%), Positives = 46/193 (23%), Gaps = 51/193 (26%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S++ E + E TG + IW V + L GH++ D+
Sbjct: 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS +A+
Sbjct: 212 WS-----------------PTVLLRS------------------------------YMAS 224
Query: 291 GDCKRNIHIWTPREA-GAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWD 348
R IWT G W+ + + WS G VLA D + +W
Sbjct: 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTLWK 282
Query: 349 TRVINTKSCMLTL 361
+ +
Sbjct: 283 ENLEGKWEPAGEV 295
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Length = 297 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 34/180 (18%), Positives = 54/180 (30%), Gaps = 51/180 (28%)
Query: 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670
GKV IW + G+ I + H ++ W+ E G
Sbjct: 77 GKVMIWKEEN------------------GRWSQIAV-----HAVHSASVNSVQWAPHEYG 113
Query: 671 -VLATGDCKRNIHIWTPREAG-----------------AWSVYLYTNRFGV--------L 704
+L + + +E G +W+
Sbjct: 114 PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173
Query: 705 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDRSNRI 762
TG + IW V + L GH++ V D+ WSP + +AS S DR+ I
Sbjct: 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCII 233
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 2e-24
Identities = 28/176 (15%), Positives = 63/176 (35%), Gaps = 10/176 (5%)
Query: 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
+ ++ W T P +A G +I +W +G S+ L++
Sbjct: 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF--IKGIGAGGSITGLKF 172
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGD 386
+P + S++ + R+ D + + + + + ++V+G +
Sbjct: 173 NPLNTNQFYASSMEGTTRLQD---FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN 229
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G + + ++ G + + H VT V +P A+ D + +WDL
Sbjct: 230 VGNVILLNM----DGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 3e-20
Identities = 47/301 (15%), Positives = 86/301 (28%), Gaps = 59/301 (19%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN------- 224
+ ++ W T P +A G +I +W G
Sbjct: 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF--IKGIGAGGSITGLKF 172
Query: 225 SAEDLQW----SDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 279
+ + S T LQ G S ++D
Sbjct: 173 NPLNTNQFYASSMEGTTRLQDFK----------------GNILRVFASSDTINIWFCSLD 216
Query: 280 WSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
S++ ++ TGD N+ + G + L H V + +P LA+
Sbjct: 217 VSAS--SRMVVTGDNVGNVILLNMD--GK---ELWNLRMHKKKVTHVALNPCCDWFLATA 269
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
SVD +++IWD R + K+ L H VN ++ +++ I V+
Sbjct: 270 SVDQTVKIWDLRQVRGKASFLYSL-PHRHPVNAACFSPDGARLLTTDQKSEIRVYSA--- 325
Query: 399 KKGSSVATFKHHTAP------VTTVEWHPTES----------STFASGGADDQ-IALWDL 441
+ H WHP + + + + + I ++D
Sbjct: 326 SQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDG 385
Query: 442 A 442
Sbjct: 386 N 386
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 85.9 bits (213), Expect = 8e-18
Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 17/143 (11%)
Query: 308 WQVD----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
+D + L W P +A S I +W+ K +
Sbjct: 104 HTLDSYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWN---FGIKDKPTFIKG 160
Query: 364 A-HTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHH---TAPVTTVE 418
+ + +N + +G + D KG+ + F +++
Sbjct: 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF----KGNILRVFASSDTINIWFCSLD 216
Query: 419 WHPTESSTFASGGADDQIALWDL 441
+ S +G + L ++
Sbjct: 217 VSAS-SRMVVTGDNVGNVILLNM 238
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 33/200 (16%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV--GHTNS 321
L++ H + + + LAT + + IW + + L H +
Sbjct: 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW---DLRQVRGKASFLYSLPHRHP 298
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL---PNAHTSDVNVIS--WNR 376
V +SP R L + IR++ + C L L P+ H + I W+
Sbjct: 299 VNAACFSPDGAR-LLTTDQKSEIRVYSA---SQWDCPLGLIPHPHRHFQHLTPIKAAWHP 354
Query: 377 TEPLIVSG------------GDDGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTV-EWHPT 422
LIV G + I V+D G + + ++ ++++ E++P
Sbjct: 355 RYNLIVVGRYPDPNFKSCTPYELRTIDVFDG---NSGKMMCQLYDPESSGISSLNEFNPM 411
Query: 423 ESSTFASGGADDQIALWDLA 442
T AS I +W
Sbjct: 412 -GDTLASAM-GYHILIWSQQ 429
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 2e-12
Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 6/113 (5%)
Query: 334 VLASCSVDLSIRIWDT---RVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGC 389
L S + +++ + ++W+ T P + G G
Sbjct: 85 KLGRASWPSVQQGLQQSFLHTLDSYRILQKA-APFDRRATSLAWHPTHPSTVAVGSKGGD 143
Query: 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
I +W+ K + +T ++++P ++ F + + L D
Sbjct: 144 IMLWNFGI-KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-07
Identities = 26/135 (19%), Positives = 42/135 (31%), Gaps = 21/135 (15%)
Query: 317 GHTNSVEDLQWSPGEKRVLA----SCSVDLSIRIWDTR-----VINTKSCMLTLPNAHTS 367
+ S L+ P K++ A S +W + +S + TL H
Sbjct: 28 RNKRSRSPLELEPEAKKLCAKGSGPSRRCDSDCLWVGLAGPQILPPCRSIVRTL---HQH 84
Query: 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
+ SW + + + L + T++ WHPT ST
Sbjct: 85 KLGRASWPSVQQGLQQ------SFLHTL---DSYRILQKAAPFDRRATSLAWHPTHPSTV 135
Query: 428 ASGGADDQIALWDLA 442
A G I LW+
Sbjct: 136 AVGSKGGDIMLWNFG 150
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Length = 435 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 4e-04
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+ TGD N+ + G + L H V + +P LA+ SVD++ +I
Sbjct: 224 VVTGDNVGNVILLNMD--GK---ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-24
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
K + GH + D+ WS L S S D +++IWD +++ C+ TL H++ V
Sbjct: 59 KTISGHKLGISDVAWSSDSNL-LVSASDDKTLKIWD---VSSGKCLKTL-KGHSNYVFCC 113
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
++N LIVSG D + +WD++ G + T H+ PV+ V ++ + S S
Sbjct: 114 NFNPQSNLIVSGSFDESVRIWDVK---TGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY 169
Query: 433 DDQIALWDLA 442
D +WD A
Sbjct: 170 DGLCRIWDTA 179
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 96.4 bits (241), Expect = 6e-22
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
K L H++ V + ++ + S S D RIWDT + C+ TL + V+ +
Sbjct: 143 KTLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPPVSFV 198
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH--PTESSTFASG 430
++ I++ D + +WD KG + T+ H + + T SG
Sbjct: 199 KFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255
Query: 431 GADDQIALWDLA 442
D+ + +W+L
Sbjct: 256 SEDNLVYIWNLQ 267
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 94.4 bits (236), Expect = 3e-21
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L GHT +V +++SP + LAS S D I+IW T+ + H ++ +
Sbjct: 17 FTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGA---YDGKFEKTI-SGHKLGISDV 71
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
+W+ L+VS DD + +WD+ G + T K H+ V ++P +S+ SG
Sbjct: 72 AWSSDSNLLVSASDDKTLKIWDV---SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSF 127
Query: 433 DDQIALWDLA 442
D+ + +WD+
Sbjct: 128 DESVRIWDVK 137
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 92.9 bits (232), Expect = 1e-20
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ + V +++SP G + + + ++D ++++WD + C+ T H ++
Sbjct: 185 KTLIDDDNPPVSFVKFSPNG--KYILAATLDNTLKLWDY---SKGKCLKTY-TGHKNEKY 238
Query: 371 VISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
I N + IVSG +D +++W+L + V + HT V + HPT +
Sbjct: 239 CIFANFSVTGGKWIVSGSEDNLVYIWNL---QTKEIVQKLQGHTDVVISTACHPT-ENII 294
Query: 428 ASGGA--DDQIALWDL 441
AS D I LW
Sbjct: 295 ASAALENDKTIKLWKS 310
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A 2h13_A 3p4f_A 4a7j_A* 2h9l_A ... Length = 312 | Back alignment and structure |
|---|
Score = 43.2 bits (103), Expect = 2e-04
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPG--VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321
L +++GH E + + + + G + +G ++IW ++ + L GHT+
Sbjct: 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW---NLQTKEI-VQKLQGHTDV 281
Query: 322 VEDLQWSPGEKRVLASCSV--DLSIRIWDT 349
V P E +AS ++ D +I++W +
Sbjct: 282 VISTACHPTENI-IASAALENDKTIKLWKS 310
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-23
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 15/193 (7%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A +HI+ + W L H V + W+P R + +C D + +W
Sbjct: 23 IAICPNNHEVHIYE-KSGNKWVQVH-ELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYVW 79
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR-RFKKGSSVAT 406
+ T L + + W E G I +
Sbjct: 80 TLKG-RTWKPTLVI-LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 137
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466
K + V +++WHP S A+G D + ++ ++ E +P
Sbjct: 138 KKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF----- 191
Query: 467 HLGQKEIKELHWH 479
+ + E
Sbjct: 192 ---GELMFESSSS 201
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 97.7 bits (244), Expect = 6e-22
Identities = 35/173 (20%), Positives = 56/173 (32%), Gaps = 22/173 (12%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
A G R I I + W V + ++V L W P LA+ S D RI+
Sbjct: 111 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDFKCRIF 169
Query: 348 DTRVINTKS---------------CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392
+ + M + V+ + ++ + D + +
Sbjct: 170 SAYIKEVEERPAPTPWGSKMPFGELMFESSS-SCGWVHGVCFSANGSRVAWVSHDSTVCL 228
Query: 393 WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445
D K +VAT T P+ V + ESS A+G D L+
Sbjct: 229 ADA---DKKMAVATLASETLPLLAVTFIT-ESSLVAAGH-DCFPVLFTYDSAA 276
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 1e-17
Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 7/131 (5%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWN 375
+ W+ + +A C + + I++ + + H V + W
Sbjct: 6 FLVEPISCHAWNKDRTQ-IAICPNNHEVHIYE---KSGNKWVQVHELKEHNGQVTGVDWA 61
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
IV+ G D +VW L+ + V W P E FA G
Sbjct: 62 PDSNRIVTCGTDRNAYVWTLKG-RTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRV 119
Query: 436 IALWDLAVERD 446
I++ E D
Sbjct: 120 ISICYFEQEND 130
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 6e-14
Identities = 32/276 (11%), Positives = 67/276 (24%), Gaps = 51/276 (18%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS------------------D 233
A G R I I + W V + ++ L W
Sbjct: 111 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 170
Query: 234 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGD 292
G+ +F S + +S+ G +A
Sbjct: 171 AYIKEVEERPAPTPWGSKMPFGE-------LMFESSSSCGWVHGVCFSAN--GSRVAWVS 221
Query: 293 CKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
+ + L T + + + E ++A+ D ++
Sbjct: 222 HDSTVCLADADKKMA-------VATLASETLPLLAVTFIT-ESSLVAAGH-DCFPVLFT- 271
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
++ + L+ S D G+ + +
Sbjct: 272 --YDSAAGKLSF-GGRLDVPKQSSQRGLTARERFQNLDK--KASSEGSAAAGAGLDSL-- 324
Query: 410 HTAPVTTVEWHP---TESSTFASGGADDQIALWDLA 442
H V+ + + S F + G D +++WD+
Sbjct: 325 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
+A +HI+ + W L H V + W+P R + +C DR+ +
Sbjct: 23 IAICPNNHEVHIYE-KSGNKWVQVH-ELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYV 78
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Length = 372 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 9e-04
Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 23/108 (21%)
Query: 672 LATGDCKRNIHIWTPR-------------EAGAWSVYLYTNRF----GVLATGDCKRNIH 714
+ T RN ++WT + A V R+ A G R I
Sbjct: 67 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCV-----RWAPNEKKFAVGSGSRVIS 121
Query: 715 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
I + W V + ++V L W P LA+ S D RI
Sbjct: 122 ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDFKCRI 168
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-23
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
+ L GHT+SV+D+ + K LASCS D++I++WD C+ T+ + H +V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKL-LASCSADMTIKLWD---FQGFECIRTM-HGHDHNVSSV 198
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
S IVS D I +W++ + G V TF H V V + + + AS
Sbjct: 199 SIMPNGDHIVSASRDKTIKMWEV---QTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSN 254
Query: 433 DDQIALWDLA 442
D + +W +A
Sbjct: 255 DQTVRVWVVA 264
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 1e-21
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRV-------------------LASCSVDLSIRIWDTRVIN 353
L H + VE + W+P L S S D +I++WD +
Sbjct: 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV---S 326
Query: 354 TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
T C++TL H + V + ++ I+S DD + VWD K + T H
Sbjct: 327 TGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY---KNKRCMKTLNAHEHF 382
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDL 441
VT++++H T + +G D + +W+
Sbjct: 383 VTSLDFHKT-APYVVTGSVDQTVKVWEC 409
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 4e-19
Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 29/150 (19%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
K GH V ++ + +ASCS D ++R+W + TK C L H V I
Sbjct: 228 KTFTGHREWVRMVRPNQDGTL-IASCSNDQTVRVWV---VATKECKAEL-REHRHVVECI 282
Query: 373 SW--------------------NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
SW + P ++SG D I +WD+ G + T H
Sbjct: 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---GMCLMTLVGHDN 339
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLA 442
V V +H S D + +WD
Sbjct: 340 WVRGVLFHSG-GKFILSCADDKTLRVWDYK 368
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 7e-18
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
LVGH N V + + G K + SC+ D ++R+WD K CM TL NAH V +
Sbjct: 332 MTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWD---YKNKRCMKTL-NAHEHFVTSL 386
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLR 396
+++T P +V+G D + VW+ R
Sbjct: 387 DFHKTAPYVVTGSVDQTVKVWECR 410
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Length = 410 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 6e-14
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 16/133 (12%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRV--LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV 369
QK ++ + + + ++ + W L + H S V
Sbjct: 62 QKKVMELESKL-----NEAKEEFTSGGPLGQKRDPKEWIP----RPPEKYAL-SGHRSPV 111
Query: 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
+ ++ ++VS +D I VWD + G T K HT V + + + AS
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHS-GKLLAS 167
Query: 430 GGADDQIALWDLA 442
AD I LWD
Sbjct: 168 CSADMTIKLWDFQ 180
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-23
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
+A G ++ + K + HTN + ++ + + + + S D +
Sbjct: 121 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCA 179
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSS 403
+WD + + + + + H +DV + +E VSGG D VWD+R G
Sbjct: 180 LWD---VESGQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR---SGQC 232
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
V F+ H + V +V ++P+ FASG D L+DL
Sbjct: 233 VQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLR 270
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 94.5 bits (236), Expect = 5e-21
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 313 KPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ GH V L +P E S D +WD R + C+ H SDVN
Sbjct: 190 QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQAF-ETHESDVNS 245
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFAS 429
+ + + SG DD ++DLR VA + ++V++ + +
Sbjct: 246 VRYYPSGDAFASGSDDATCRLYDLR---ADREVAIYSKESIIFGASSVDFSLS-GRLLFA 301
Query: 430 GGADDQIALWDLA 442
G D I +WD+
Sbjct: 302 GYNDYTINVWDVL 314
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 2e-20
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 20/181 (11%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHT 319
L SF GH + +D + +E G +G C + +W + + + H
Sbjct: 188 LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-------VQAFETHE 240
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTE 378
+ V +++ P AS S D + R++D R + + + + ++ +
Sbjct: 241 SDVNSVRYYPSGDA-FASGSDDATCRLYDLR---ADREVAIYSKESIIFGASSVDFSLSG 296
Query: 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438
L+ +G +D I+VWD+ KGS V+ H V+T+ P + + F SG D + +
Sbjct: 297 RLLFAGYNDYTINVWDV---LKGSRVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRV 352
Query: 439 W 439
W
Sbjct: 353 W 353
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 3e-20
Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 14/165 (8%)
Query: 286 GVLATGDCKRNIHIWTPREAG-----AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ ++ + E ++ L GH N V + W ++R + S S
Sbjct: 26 KLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLKGHGNKVLCMDWCKDKRR-IVSSSQ 84
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL---RR 397
D + +WD+ T + + + V ++ + I GG D V+ L +
Sbjct: 85 DGKVIVWDS---FTTNKEHAVT-MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + HT ++ + + D ALWD+
Sbjct: 141 ENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVE 184
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 354 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 6e-17
Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 15/154 (9%)
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--------- 364
G + E L + ++ D + + L
Sbjct: 3 ATDGLHENETLASLKS-EAESLKGKLEEERAKLHDVELHQVAERVEALGQFVMKTRRTLK 61
Query: 365 -HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
H + V + W + + IVS DG + VWD + V + P+
Sbjct: 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDS---FTTNKEHAVTMPCTWVMACAYAPS- 117
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELK 457
A GG D++ +++ L +++ + ++ +
Sbjct: 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA 151
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-23
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 313 KPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVN 370
+ VGHT V + +S R + S S D +I++W+T C T+ +H+ V+
Sbjct: 122 RRFVGHTKDVLSVAFSSDN--RQIVSGSRDKTIKLWNT----LGVCKYTVQDESHSEWVS 175
Query: 371 --VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
S N + P+IVS G D + VW+L HT + TV P + S A
Sbjct: 176 CVRFSPNSSNPIIVSCGWDKLVKVWNL---ANCKLKTNHIGHTGYLNTVTVSP-DGSLCA 231
Query: 429 SGGADDQIALWDLA 442
SGG D Q LWDL
Sbjct: 232 SGGKDGQAMLWDLN 245
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 93.7 bits (234), Expect = 8e-21
Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 7/155 (4%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
++G +++ + L GH V + +P ++ S S D +I +W
Sbjct: 7 HSSGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMW 66
Query: 348 D--TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
N L H+ V+ + + +SG DG + +WDL G++
Sbjct: 67 KLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL---TTGTTTR 122
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
F HT V +V + ++ SG D I LW+
Sbjct: 123 RFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWN 156
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 85.6 bits (213), Expect = 3e-18
Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 14/156 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRI 346
+ +G + I +W H+ V +++SP ++ SC D +++
Sbjct: 143 IVSGSRDKTIKLW---NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV 199
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W+ + HT +N ++ + L SGG DG +WDL +G + T
Sbjct: 200 WN---LANCKLKTNH-IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL---NEGKHLYT 252
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + + P + + I +WDL
Sbjct: 253 LDGGD-IINALCFSP--NRYWLCAATGPSIKIWDLE 285
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 7e-16
Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 24/148 (16%)
Query: 308 WQVD----QKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
W + + +GHT + + SP G + AS D +WD +N + TL
Sbjct: 200 WNLANCKLKTNHIGHTGYLNTVTVSPDG--SLCASGGKDGQAMLWD---LNEGKHLYTL- 253
Query: 363 NAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDL------RRFKKGSSVATFKHHTAPV 414
+N + + NR + I +WDL K+ + K
Sbjct: 254 -DGGDIINALCFSPNRY---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309
Query: 415 TTVEWHPTESSTFASGGADDQIALWDLA 442
T++ W + T +G D+ + +W +
Sbjct: 310 TSLAWSA-DGQTLFAGYTDNLVRVWQVT 336
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 71.4 bits (176), Expect = 2e-13
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 333 RVLASCSVDLSIRIWDTRVIN-TKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCI 390
+S + ++ ++ + TL H V I+ P +I+S D I
Sbjct: 5 HHHSSGVDLGTENLYFQSMMTEQMTLRGTL-KGHNGWVTQIATTPQFPDMILSASRDKTI 63
Query: 391 HVWDLRRFKK--GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+W L R + G + H+ V+ V + SG D + LWDL
Sbjct: 64 IMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLT 116
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Length = 340 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 9/62 (14%), Positives = 15/62 (24%), Gaps = 10/62 (16%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L + +V L WS + L + D +R+W
Sbjct: 284 LEGKIIVDELK---------QEVISTSSKAEPPQCTSLAWSADGQT-LFAGYTDNLVRVW 333
Query: 348 DT 349
Sbjct: 334 QV 335
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 6e-23
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 10/155 (6%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A G I+ + + L GHT + ++ + + + S D + +W
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALW 169
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D I T T HT DV +S L VSG D +WD+R +G TF
Sbjct: 170 D---IETGQQTTTF-TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR---EGMCRQTF 222
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H + + + + P + FA+G D L+DL
Sbjct: 223 TGHESDINAICFFPN-GNAFATGSDDATCRLFDLR 256
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 93.7 bits (234), Expect = 7e-21
Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 19/157 (12%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+G C + +W ++ GH + + + + P A+ S D +
Sbjct: 199 FVSGACDASAKLWDVREGMC-------RQTFTGHESDINAICFFPNGNA-FATGSDDATC 250
Query: 345 RIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
R++D R ++T + + +S++++ L+++G DD +VWD K
Sbjct: 251 RLFDLR---ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA---LKADR 304
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
H V+ + + A+G D + +W+
Sbjct: 305 AGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 91.4 bits (228), Expect = 5e-20
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 11/132 (8%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
GHT V L +P + S + D S ++WD R C T H SD+N I
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRL-FVSGACDASAKLWDVR---EGMCRQTF-TGHESDINAI 232
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFASG 430
+ +G DD ++DLR + T+ H +T+V + + +G
Sbjct: 233 CFFPNGNAFATGSDDATCRLFDLR---ADQELMTYSHDNIICGITSVSFSKS-GRLLLAG 288
Query: 431 GADDQIALWDLA 442
D +WD
Sbjct: 289 YDDFNCNVWDAL 300
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 8e-20
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 18/174 (10%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
+ + +T + D I + T ++ L GH + + W
Sbjct: 16 NQIRDARKACADATLSQITNNIDPVGRIQMRT----------RRTLRGHLAKIYAMHWGT 65
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
+ R+L S S D + IWD+ T + + +P +S V ++ + + GG D
Sbjct: 66 -DSRLLLSASQDGKLIIWDS---YTTNKVHAIP-LRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 390 IHVWDLR-RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+++L+ R HT ++ + + + D ALWD+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD--DNQIVTSSGDTTCALWDIE 172
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Length = 340 | Back alignment and structure |
|---|
Score = 70.6 bits (174), Expect = 4e-13
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 14/130 (10%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
+ L ++ + ++D RI TL H + + +
Sbjct: 12 EQLKNQIRDARKACADATLSQI--TNNIDPVGRIQMR-------TRRTL-RGHLAKIYAM 61
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
W L++S DG + +WD + V ++ V T + P+ + A GG
Sbjct: 62 HWGTDSRLLLSASQDGKLIIWDS---YTTNKVHAIPLRSSWVMTCAYAPS-GNYVACGGL 117
Query: 433 DDQIALWDLA 442
D+ ++++L
Sbjct: 118 DNICSIYNLK 127
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 1e-22
Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 28/193 (14%)
Query: 280 WSSTEPG-VLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVL 335
W+ + G +LA+ D K + IW +E H+ SV +QW+P E +L
Sbjct: 61 WAHPKFGTILASCSYDGK--VLIW--KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL 116
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWN-------------RTEPLI 381
S D + + + + +AH VN SW +
Sbjct: 117 LVASSDGKVSVVE---FKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173
Query: 382 VSGGDDGCIHVWDLRR-FKKGSSVATFKHHTAPVTTVEWHP--TESSTFASGGADDQIAL 438
V+GG D + +W + +T + H+ V V W P S AS D +
Sbjct: 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233
Query: 439 WDLAVERDSEIEQ 451
W E+ +
Sbjct: 234 WTQDNEQGPWKKT 246
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 9e-22
Identities = 45/277 (16%), Positives = 74/277 (26%), Gaps = 60/277 (21%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+ + H ++ W+ E G +L + + +E G + H
Sbjct: 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS--PIIIDAHAIGVN 149
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
W+ P + E + G
Sbjct: 150 SASWA-----------PATIEEDGEHNGTKES--------------------------RK 172
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIR 345
TG + IW V + L GH++ V D+ WSP + LAS S D +
Sbjct: 173 FVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232
Query: 346 IWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
IW TL + SW+ + ++ G D + +W
Sbjct: 233 IWTQDN-EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK--------- 282
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ P V SGG +D
Sbjct: 283 -ENLEGKWEPAGEVHQGG-----GGSGGGGATSKEFD 313
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 93.1 bits (231), Expect = 1e-19
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 20/170 (11%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK-RVLASCSVDLSIRI 346
LAT + I I+ E ++ L GH V + W+ + +LASCS D + I
Sbjct: 24 LATCSSDKTIKIFE-VEGETHKL-IDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
W S + H++ VN + W + PL++ DG + V + + +S
Sbjct: 82 WKEEN-GRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKE-NGTTSP 138
Query: 405 ATFKHHTAPVTTVEWHPTESS------------TFASGGADDQIALWDLA 442
H V + W P F +GGAD+ + +W
Sbjct: 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 93.1 bits (231), Expect = 1e-19
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 7/131 (5%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
H + D KR LA+CS D +I+I++ T + TL H V + W
Sbjct: 5 ANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEG-ETHKLIDTL-TGHEGPVWRVDW 61
Query: 375 NRTE--PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES-STFASGG 431
+ ++ S DG + +W + S +A H+A V +V+W P E
Sbjct: 62 AHPKFGTILASCSYDGKVLIWKEEN-GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS 120
Query: 432 ADDQIALWDLA 442
+D ++++ +
Sbjct: 121 SDGKVSVVEFK 131
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 1e-09
Identities = 35/254 (13%), Positives = 55/254 (21%), Gaps = 68/254 (26%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ 230
S++ E + E TG + IW V + L GH++ D+
Sbjct: 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 211
Query: 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 290
WS LA+
Sbjct: 212 WS-----------------PTVLLRS------------------------------YLAS 224
Query: 291 GDCKRNIHIWTPREA-GAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWD 348
R IWT G W+ + + WS G VLA D + +W
Sbjct: 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTLWK 282
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
+ + SGG +D + F
Sbjct: 283 ENLEGKWEPAGEVHQGG---------------GGSGGGGATSKEFDGPCQNEIDL--LFS 325
Query: 409 HHTAPVTTVEWHPT 422
+ +
Sbjct: 326 ECNDEIDNAKLIMK 339
|
| >3jro_A Fusion protein of protein transport protein SEC13 and nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, ER-golgi transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Length = 753 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 35/180 (19%), Positives = 54/180 (30%), Gaps = 51/180 (28%)
Query: 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670
GKV IW + G+ I + H ++ W+ E G
Sbjct: 77 GKVLIWKEEN------------------GRWSQIAV-----HAVHSASVNSVQWAPHEYG 113
Query: 671 -VLATGDCKRNIHIWTPREAG-----------------AWSVYLYTNRFGV--------L 704
+L + + +E G +W+
Sbjct: 114 PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173
Query: 705 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDRSNRI 762
TG + IW V + L GH++ V D+ WSP + LAS S DR+ I
Sbjct: 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 2e-22
Identities = 9/166 (5%), Positives = 21/166 (12%), Gaps = 20/166 (12%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
G D+ K + + +
Sbjct: 123 PRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLL 182
Query: 345 RIWDTRVINTKSCMLTLPNA----HTSDVNVISWN----RTEPLIVSGGDDGCIHVWDLR 396
+ + +L + V +
Sbjct: 183 ARMV---LQMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEE---EAALVAPDYGAVAEYA 236
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + T P + A A
Sbjct: 237 A--PAADTWGGEWGTDAAAQPAAIP-AQAGADWTAAPAPAAGGWDT 279
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 3e-20
Identities = 9/180 (5%), Positives = 26/180 (14%), Gaps = 15/180 (8%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+ +R I+ + + L + ++
Sbjct: 20 QMMLAADVHLGTKNCDF--QMERYVYKRRTDGIY---IINLGKT-WEKLQLAARVIVAIE 73
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386
+ V ++ + HT +
Sbjct: 74 NPQ-DIIVQSARPYGQRAVLKFA---QYTGAHAIAG-RHTPGTFTNQLQTSFSEPRLLIL 128
Query: 387 DGCIHVWDLR----RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + + G +A L
Sbjct: 129 TDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQ 188
|
| >3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Length = 305 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 1e-18
Identities = 9/130 (6%), Positives = 25/130 (19%), Gaps = 10/130 (7%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
++ + + + + I+ L + I
Sbjct: 19 IQMMLAADVHLGTKNCDFQMER--YVYKRRTDGIYIIN---LGKTWEKL-QLAARVIVAI 72
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
+ + + + + + A HT T + + S
Sbjct: 73 ENPQDIIVQSARPYGQRAVLKFA---QYTGAHAIAGRHTPGTFTNQLQTS-FSEPRLLIL 128
Query: 433 DDQIALWDLA 442
D
Sbjct: 129 TDPRTDHQPI 138
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 4e-22
Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 14/162 (8%)
Query: 288 LATGDCKRNI-----HIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVD 341
TG + + L T+ +L++ K + + V
Sbjct: 210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGHVS 268
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKK 400
I + + + +K + LP+ T N ++ + I +G ++G + WDLR +
Sbjct: 269 GVITVHN---VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS-PE 324
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ P+ V + + F S G D I L ++
Sbjct: 325 CPVGEFLINEGTPINNVYFAA--GALFVSSGFDTSIKLDIIS 364
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 2e-20
Identities = 18/160 (11%), Positives = 51/160 (31%), Gaps = 15/160 (9%)
Query: 288 LATGDCKRNIHIWTPREAGA--WQVDQKPLVGHT---NSVEDLQWSPGEKRVLASCSVDL 342
+ + + + + + + + ++G++ ++ + + L +D
Sbjct: 20 VLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSH-LYKARLDG 78
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+++T + L V + + G +G I V D
Sbjct: 79 HDFLFNT---IIRDGSKML--KRADYTAVDTAKLQMRRFILGTTEGDIKVLDS---NFNL 130
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H + +T +++ P S D Q+ +W +
Sbjct: 131 QREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVK 169
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 93.5 bits (233), Expect = 2e-20
Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 14/155 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L + ++ ++ + +R + + I++
Sbjct: 71 LYKARLDGHDFLF---NTIIRD--GSKMLKRADYTAVDTAKLQMRR-FILGTTEGDIKVL 124
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D N AH S++ + + + ++S D + +W + K GS+ T
Sbjct: 125 D---SNFNLQREID-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSV---KDGSNPRTL 177
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H A VT + S D I LW+
Sbjct: 178 IGHRATVTDIAIID-RGRNVLSASLDGTIRLWECG 211
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 1e-18
Identities = 30/180 (16%), Positives = 60/180 (33%), Gaps = 39/180 (21%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRI 346
G + +I + ++ ++ H + + L++ P G L S S D+ ++I
Sbjct: 112 FILGTTEGDIKVL---DSNFNLQ-REIDQAHVSEITKLKFFPSG--EALISSSQDMQLKI 165
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
W + S TL H + V I+ ++S DG I +W+ G+++ T
Sbjct: 166 WSVK---DGSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC---GTGTTIHT 218
Query: 407 FKHHTAP------------------------VTTVEWHPTESSTFASGGADDQIALWDLA 442
F P +E+ +G I + ++
Sbjct: 219 FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVF 277
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Length = 420 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 5e-17
Identities = 24/169 (14%), Positives = 46/169 (27%), Gaps = 26/169 (15%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ G I + + + + T S L + + + + W
Sbjct: 262 VIAGHVSGVITVH---NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQW 318
Query: 348 DTRVINTKSCMLTLP-NAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSV 404
D R + C + + +N + + L VS G D I + + S
Sbjct: 319 DLR---SPECPVGEFLINEGTPINNVYFA---AGALFVSSGFDTSIKLDII---SDPESE 369
Query: 405 ATFKHHTAPVTTVEWHPTESS-----------TFASGGADDQIALWDLA 442
P V S G ++ AL++L+
Sbjct: 370 RPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 5e-22
Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 21/196 (10%)
Query: 261 PTPPLFSFSGHLTEGFAMDWSSTE---PG--VLATGDCKRNIHIWTPREAGAWQVDQKPL 315
P P++S GH A+D G + TG + +W PR+ + +P+
Sbjct: 100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV 159
Query: 316 VGHTNS-----VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
G ++ E+ + + + I+++D R + N + V
Sbjct: 160 QGENKRDCWTVAFGNAYNQEERV-VCAGYDNGDIKLFDLR---NMAL-RWETN-IKNGVC 213
Query: 371 VISWNR---TEPLIVSGGDDGCIHVWDLR--RFKKGSSVATFKHHTAPVTTVEWHPTESS 425
+ ++R + +V+ +G HV+D+R KG + + K H + V V P
Sbjct: 214 SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRE 273
Query: 426 TFASGGADDQIALWDL 441
F + G + LW
Sbjct: 274 LFLTAGGAGGLHLWKY 289
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 3e-21
Identities = 30/168 (17%), Positives = 67/168 (39%), Gaps = 21/168 (12%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW------SPGEKRVLASCSVD 341
LATGD N+HIW A ++ + GH + + G + + S D
Sbjct: 83 LATGDFGGNLHIW---NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRD 138
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHT-----SDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
++++WD R + + + ++N+ E ++ +G D+G I ++DLR
Sbjct: 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR 198
Query: 397 RFKKGSSVATFKHHTAPVTTVEWHP--TESSTFASGGADDQIALWDLA 442
++ + V ++E+ + + + + ++D+
Sbjct: 199 ----NMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-19
Identities = 46/305 (15%), Positives = 92/305 (30%), Gaps = 77/305 (25%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS------------------- 232
LATGD N+HIW A ++ + GH +
Sbjct: 83 LATGDFGGNLHIW---NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139
Query: 233 -----DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
D + V + + NK+ + ++ +
Sbjct: 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWT--VAFGNAYNQEERV--------------- 182
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIR 345
+ G +I ++ R A + N V L++ L + S++
Sbjct: 183 VCAGYDNGDIKLFDLR-NMA----LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237
Query: 346 IWDTRVINTKS--CMLTLPNAHTSDVNVISW---NRTEPLIVSGGDDGCIHVWDLRRFKK 400
++D R + ++ AH S V + NR L ++ G G +H+W +
Sbjct: 238 VFDMRTQHPTKGFASVSE-KAHKSTVWQVRHLPQNRE--LFLTAGGAGGLHLWKYEYPIQ 294
Query: 401 ----------------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
S + T P+++++W P + D + + V
Sbjct: 295 RSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLI--VT 352
Query: 445 RDSEI 449
+ ++I
Sbjct: 353 KLNKI 357
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Length = 357 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 6e-18
Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 16/145 (11%)
Query: 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV---DLSIRIWDTRVINTKSCMLTLPNAH 365
Q+ G +V D +W P + + + I++++ I L
Sbjct: 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYE---IQHGDLKLLREIEK 64
Query: 366 TSDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
+ ++ T + +G G +H+W+L + V + K H + ++
Sbjct: 65 AKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM--PVYSVKGHKEIINAIDGIGG 122
Query: 423 ES-----STFASGGADDQIALWDLA 442
+G D + +WD
Sbjct: 123 LGIGEGAPEIVTGSRDGTVKVWDPR 147
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-21
Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 15/155 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L + I +W + D L H +V+D + + L S S D ++++W
Sbjct: 1018 LISSSEDSVIQVWNWQTG-----DYVFLQAHQETVKDFRLLQDSR--LLSWSFDGTVKVW 1070
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ T H V + + S D +W S +
Sbjct: 1071 NVI---TGRIERDF-TCHQGTVLSCAISSDATKFSSTSADKTAKIWSF---DLLSPLHEL 1123
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
K H V + A+G + +I +W+++
Sbjct: 1124 KGHNGCVRCSAFSLD-GILLATGDDNGEIRIWNVS 1157
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 2e-21
Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 22/190 (11%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
L H E +SS + +AT + + IW ++ ++ H+ V
Sbjct: 649 KLLDIKAHEDEVLCCAFSSDDS-YIATCSADKKVKIW---DSATGKL-VHTYDEHSEQVN 703
Query: 324 DLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382
++ +LA+ S D +++WD N K C T+ HT+ VN ++ + L+
Sbjct: 704 CCHFTNKSNHLLLATGSNDFFLKLWDL---NQKECRNTMF-GHTNSVNHCRFSPDDELLA 759
Query: 383 SGGDDGCIHVWDLR----------RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
S DG + +WD+R + SS + V W +
Sbjct: 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSA-DGDKIIVAA- 817
Query: 433 DDQIALWDLA 442
+++ L+D+
Sbjct: 818 KNKVLLFDIH 827
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 6e-21
Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 10/163 (6%)
Query: 282 STEPGVLATGDCKRNIHIWT-PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 340
+ + A + + + + + HT++V +S +R +ASC
Sbjct: 577 YRQAKLQAKQEGDTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQR-IASCGA 635
Query: 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK 400
D +++++ T +L + AH +V +++ + I + D + +WD
Sbjct: 636 DKTLQVFKA---ETGEKLLDI-KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS---AT 688
Query: 401 GSSVATFKHHTAPVTTVEWHPT-ESSTFASGGADDQIALWDLA 442
G V T+ H+ V + A+G D + LWDL
Sbjct: 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN 731
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 2e-20
Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 18/155 (11%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ D R + + + + V SP + +A D +I+I
Sbjct: 937 VLAVDNIRGLQLIAGKTG-------QIDYLPEAQVSCCCLSPHLEY-VAFGDEDGAIKII 988
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ + H V I + ++S +D I VW+ +
Sbjct: 989 ELP---NNRVFSSG-VGHKKAVRHIQFTADGKTLISSSEDSVIQVWNW----QTGDYVFL 1040
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H V S S D + +W++
Sbjct: 1041 QAHQETVKDFRLLQ--DSRLLSWSFDGTVKVWNVI 1073
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 2e-19
Identities = 25/163 (15%), Positives = 52/163 (31%), Gaps = 22/163 (13%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
++ + IW L GH V +S LA+ + IRIW
Sbjct: 1100 FSSTSADKTAKIW---SFDLLSP-LHELKGHNGCVRCSAFSLDGIL-LATGDDNGEIRIW 1154
Query: 348 DTRVINTKSCMLTLP--------NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
+ ++ + + H V + ++ +VS G + W++
Sbjct: 1155 N---VSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGY--LKWWNV---A 1206
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G S TF + + + P + T+ + + + +
Sbjct: 1207 TGDSSQTFYTNGTNLKKIHVSP-DFRTYVTVDNLGILYILQVL 1248
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 93.0 bits (231), Expect = 2e-19
Identities = 37/284 (13%), Positives = 89/284 (31%), Gaps = 31/284 (10%)
Query: 168 PLFSFSGHLTEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSA 226
+ ++ H + +++ +LATG + +W + + + GHTNS
Sbjct: 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC----RNTMFGHTNSV 746
Query: 227 EDLQWS-DLKT-ALQTVDDPFQL----AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW 280
++S D + A + D +L + + +K W
Sbjct: 747 NHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806
Query: 281 SSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
S + K + ++ + + + GH ++++ +SP +
Sbjct: 807 S---ADGDKIIVA-AKNKVLLF---DIHTSGLLAEIHTGHHSTIQYCDFSPYDHL-AVIA 858
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
+ +W+ ++ + H S V+ + ++ ++ DD I VW+
Sbjct: 859 LSQYCVELWNID---SRLKVADC-RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET--- 911
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
KK + V + + + + L
Sbjct: 912 KKVCKNSAIVLKQ--EIDVVFQE-NETMVLAVDNIRGLQLIAGK 952
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 67.9 bits (166), Expect = 9e-12
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ V ++ Q R+ +I+ V+ HT V
Sbjct: 572 ETSEVYRQAKLQAKQEGD-TGRLYLEWINKKTIKNLSRLVVR----------PHTDAVYH 620
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG 431
+++ I S G D + V+ + G + K H V + + S A+
Sbjct: 621 ACFSQDGQRIASCGADKTLQVFKA---ETGEKLLDIKAHEDEVLCCAFSS-DDSYIATCS 676
Query: 432 ADDQIALWDLA 442
AD ++ +WD A
Sbjct: 677 ADKKVKIWDSA 687
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-----------EAGAWSV-Y 695
L H E +SS + +AT + + IW +
Sbjct: 649 KLLDIKAHEDEVLCCAFSSDDS-YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHF 707
Query: 696 LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
+ +LATG + +W + + + GHTNSV ++SP ++ LASCS
Sbjct: 708 TNKSNHLLLATGSNDFFLKLWDLNQKEC----RNTMFGHTNSVNHCRFSPDDEL-LASCS 762
Query: 756 VDRSNRI 762
D + R+
Sbjct: 763 ADGTLRL 769
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 1e-21
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
LA+G I+I+ + ++ L GH + L +SP + L + S D I+I+
Sbjct: 179 LASGAIDGIINIF---DIATGKL-LHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIY 233
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D + + TL + H S V +++ + VS D + VWD+ + V TF
Sbjct: 234 DVQ---HANLAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV---GTRTCVHTF 286
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
H V V+++ S S G D +I ++D
Sbjct: 287 FDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDC 319
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 96.0 bits (240), Expect = 1e-21
Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRI 346
+ TG + +W + Q L GH V + S + AS S+D IR+
Sbjct: 51 VVTGSLDDLVKVWKW-RDERLDL-QWSLEGHQLGVVSVDISHTL--PIAASSSLDAHIRL 106
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD + + ++ +A D ++++ + +G G ++++ + + G +
Sbjct: 107 WD---LENGKQIKSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV---ESGKKEYS 159
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ ++ + P + ASG D I ++D+A
Sbjct: 160 LDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIA 194
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 94.8 bits (237), Expect = 2e-21
Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 13/158 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK---RVLASCSVDLSI 344
+ T + + + K H +++ + W +K + + S+D +
Sbjct: 5 HHHSSRENLYFQGTNQ----YGILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLV 60
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
++W R +L H V + + T P+ S D I +WDL + G +
Sbjct: 61 KVWKWRD-ERLDLQWSL-EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL---ENGKQI 115
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ T+ + P +S A+G ++ ++ +
Sbjct: 116 KSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVE 152
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Length = 321 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 4e-21
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 19/158 (12%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
LATG ++I+ + ++ + L + + +SP K LAS ++D I
Sbjct: 137 LATGTHVGKVNIFGVESGKK-------EYSLDTRGKFILSIAYSPDGKY-LASGAIDGII 188
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
I+D I T + TL H + ++++ L+V+ DDG I ++D+ + +
Sbjct: 189 NIFD---IATGKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV---QHANLA 241
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
T H + V V + P + + F S +D + +WD+
Sbjct: 242 GTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVG 278
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 1e-21
Identities = 40/267 (14%), Positives = 81/267 (30%), Gaps = 53/267 (19%)
Query: 264 PLFSFSGHLTEGFAMD-----WS---STEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315
+ ++ + W+ +T +LA + I I Q K
Sbjct: 56 EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRII---NPITMQC-IKHY 111
Query: 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--HTSDVNVIS 373
VGH N++ +L++ P + +L S S D ++R+W+ + T + + H +V
Sbjct: 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ---TDTLVAIFGGVEGHRDEVLSAD 168
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA--------------------- 412
++ I+S G D + +W + + K
Sbjct: 169 YDLLGEKIMSCGMDHSLKLWRI---NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225
Query: 413 -------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF 465
V V W S ++ I W D + + +E
Sbjct: 226 TRDIHRNYVDCVRWLGD---LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD 282
Query: 466 IHLGQKEIKELHWHPQLPGTIISTANS 492
Q +I + + +++ N
Sbjct: 283 YS--QCDIWYMRFSMDFWQKMLALGNQ 307
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 7e-20
Identities = 20/148 (13%), Positives = 55/148 (37%), Gaps = 21/148 (14%)
Query: 308 WQVDQKPLVGHTNSVEDLQWSP----GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
++ H + +Q++ G+ V A+ + +++ +++ + L
Sbjct: 7 FKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVG-SNRVTLYE---CHSQGEIRLL-Q 61
Query: 364 AHTS-----DVNVISW----NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV 414
++ + +W N + PL+ G G I + + + + H +
Sbjct: 62 SYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP---ITMQCIKHYVGHGNAI 118
Query: 415 TTVEWHPTESSTFASGGADDQIALWDLA 442
+++HP + + S D + LW++
Sbjct: 119 NELKFHPRDPNLLLSVSKDHALRLWNIQ 146
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 1e-18
Identities = 31/192 (16%), Positives = 59/192 (30%), Gaps = 38/192 (19%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+ + D++ + IH D H N V+
Sbjct: 195 MMNAIKESY------DYNP-NKTNRPFIS--QKIHFP----------DFSTRDIHRNYVD 235
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWD-------TRVINTKSCMLTLP---NAHTSDVNVIS 373
++W ++ S S + +I W I +T+ + D+ +
Sbjct: 236 CVRWLG---DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR 292
Query: 374 W--NRTEPLIVSGGDDGCIHVWDLRRFK-KGSSVATFKHHT--APVTTVEWHPTESSTFA 428
+ + + ++ G G ++VWDL + T HH A + + SS
Sbjct: 293 FSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD-SSILI 351
Query: 429 SGGADDQIALWD 440
+ D I WD
Sbjct: 352 AVCDDASIWRWD 363
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Length = 366 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 691 AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 750
AW+ T+ +LA + I I Q K VGH N++ +L++ P + +
Sbjct: 76 AWTYDSNTSH-PLLAVAGSRGIIRII---NPITMQC-IKHYVGHGNAINELKFHPRDPNL 130
Query: 751 LASCSVDRSNRI 762
L S S D + R+
Sbjct: 131 LLSVSKDHALRL 142
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 98.4 bits (244), Expect = 1e-21
Identities = 45/371 (12%), Positives = 102/371 (27%), Gaps = 47/371 (12%)
Query: 185 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244
+ + I I+ + V + + DL+W + A V
Sbjct: 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVG-- 226
Query: 245 FQLA-------------EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291
L+ N + P + S + D+ S P + G
Sbjct: 227 -CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS--PTTVVCG 283
Query: 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL--QWSPGEKRVLASCSVDLSIRIWDT 349
+ + + +V H + + + +S E V+++ +VD I++
Sbjct: 284 FKNGFVAEFDLTD---PEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP 340
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409
+ + + T+ S++ + + + + R + + +
Sbjct: 341 K--DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET 398
Query: 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469
+ HP +G AD + + + A I+ A K L
Sbjct: 399 TITAIGVSRLHP----MVLAGSADGSLIITNAARRLLHGIKNSSATQKSL---------- 444
Query: 470 QKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG- 528
L +S + ++ + S+ I I W+ G
Sbjct: 445 -----RLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAK-IDAHGINITCTKWNETSAGG 498
Query: 529 -TIISTANSGF 538
+ ++G
Sbjct: 499 KCYAFSNSAGL 509
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 83.4 bits (205), Expect = 8e-17
Identities = 47/381 (12%), Positives = 109/381 (28%), Gaps = 82/381 (21%)
Query: 128 SNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 187
S + E+ D E + + + G + + + W
Sbjct: 162 SQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD---LKWHEG 218
Query: 188 EP-----GVLATGDCKRNIHIW----TPREAGAWQVDQKP---LGGHTNSAEDLQWSDLK 235
G L+ + I+ + +++ +KP L + +
Sbjct: 219 CHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT 278
Query: 236 TALQTVDD----PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD--WSSTEPGVLA 289
T + + F L + P P F H + ++ +S E V++
Sbjct: 279 TVVCGFKNGFVAEFDLTD-----------PEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327
Query: 290 TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349
T +I+ P++ + +++ + + P + S S+R +
Sbjct: 328 TVAVDGYFYIFNPKDIATTKTTVSR--FRGSNLVPVVYCPQIYSYIYSDGAS-SLRAVPS 384
Query: 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR-----FKKGSSV 404
R +++ + + I +R P++++G DG + + + R K S+
Sbjct: 385 RAAFAVHPLVS----RETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSAT 440
Query: 405 ATFKH------------------------------------HTAPVTTVEWHPTE--SST 426
H +T +W+ T
Sbjct: 441 QKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKC 500
Query: 427 FASGGADDQIALWDLAVERDS 447
+A + + L L++E
Sbjct: 501 YAFSNSAGLLTLEYLSLEHHH 521
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 65.7 bits (159), Expect = 3e-11
Identities = 33/258 (12%), Positives = 68/258 (26%), Gaps = 32/258 (12%)
Query: 300 WTPREAGAW-QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
W E D + L + D + + I+I+
Sbjct: 141 WLNIEENTDIGKDIQYLAVAVSQYMDEPLNE-HLEMFDKEKHSSCIQIFKMNTSTLHCVK 199
Query: 359 LTLPNAHTSDVNVISWNRTEP------LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
+ +V + W+ + +G I+ ++ + V FK
Sbjct: 200 VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEI--IDNATDVHVFKMCEK 257
Query: 413 PVTTVEWHPTES--------STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464
P T+ + +T G + +A +DL ++PS
Sbjct: 258 PSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDL-------------TDPEVPSFYD 304
Query: 465 FIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQLLFIHLGQKEIKELHWH 523
+H + + + A G+ IF ++ + + +
Sbjct: 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC 364
Query: 524 PQLPGTIISTANSGFNIF 541
PQ+ I S S
Sbjct: 365 PQIYSYIYSDGASSLRAV 382
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} Length = 524 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 3e-06
Identities = 57/443 (12%), Positives = 111/443 (25%), Gaps = 92/443 (20%)
Query: 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396
+VI K+ + T N+I ++ G D + D
Sbjct: 56 CLDPPCKKESAYNKVIGDKNRTVYHEINKTEFENMIKLRTKRLKLLIGEVDAEVSTGDKI 115
Query: 397 RFKKGSSVATFKHHT---APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453
F ++ VT + W E +T
Sbjct: 116 EFPVLANGKRRGFIYNVGGLVTDIAWLNIEENTDIGKD---------------------- 153
Query: 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG 513
Q L + + Q + L+ H ++ ++ T + ++ I
Sbjct: 154 -------IQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHS 206
Query: 514 QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDR 573
E+ +L WH + L+ ++ + +
Sbjct: 207 FGEVWDLKWHEGCHAPH--------------LVGCLSFVSQEGTINFLEIIDNATDVHVF 252
Query: 574 RKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAE 633
+ + I +T + G + G V +DL
Sbjct: 253 KMCEKPSLTLSLADSLITTF-DFLSPTTVVCG--FKNGFVAEFDLTD------------- 296
Query: 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMD--WSSTEPGVLATGDCKRNIHIWTPREAGA 691
P P F H + ++ +S E V++T +I+ P++
Sbjct: 297 -----------PEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345
Query: 692 WSVYLYTNR------------FGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 739
+ R D ++ R A A PLV ++
Sbjct: 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTIT 401
Query: 740 DLQWSPGEKRVLASCSVDRSNRI 762
+ S + + S D S I
Sbjct: 402 AIGVSRLHPM-VLAGSADGSLII 423
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 2e-21
Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 9/155 (5%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
++ G + + ++ + + +SP K LA+ + D IRIW
Sbjct: 92 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF-LATGAEDRLIRIW 150
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D I + ++ L H D+ + + + +VSG D + +WDL + G T
Sbjct: 151 D---IENRKIVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL---RTGQCSLTL 203
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
VTTV P + A+G D + +WD
Sbjct: 204 SIEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSE 237
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 4e-19
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 22/172 (12%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+A G R + +W T + + GH +SV + ++ + + S S+D S+
Sbjct: 222 IAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VVSGSLDRSV 280
Query: 345 RIWDTR---------VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
++W+ + N+ +C +T H V ++ + + I+SG D + WD
Sbjct: 281 KLWNLQNANNKSDSKTPNSGTCEVTY-IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTES-----STFASGGADDQIALWDLA 442
K G+ + + H V +V S + FA+G D + +W
Sbjct: 340 ---KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 9e-18
Identities = 23/172 (13%), Positives = 62/172 (36%), Gaps = 23/172 (13%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+ K+ + P V+ + HT+ V +++S + LA+ + +
Sbjct: 30 VPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY-LATGC-NKTT 87
Query: 345 RIWDT--------------RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390
+++ + ++ + + + + ++ + +G +D I
Sbjct: 88 QVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 147
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+WD+ + V + H + ++++ P SG D + +WDL
Sbjct: 148 RIWDI---ENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLR 195
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 3e-15
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT---RVINTKSCMLTLPNAHTSD 368
+ + V + SPG+ + +A+ S+D ++R+WD+ ++ H
Sbjct: 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 258
Query: 369 VNVISWNRTEPLIVSGGDDGCIHVWDLR---------RFKKGSSVATFKHHTAPVTTVEW 419
V + + R +VSG D + +W+L+ G+ T+ H V +V
Sbjct: 259 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 318
Query: 420 HPTESSTFASGGADDQIALWDLA 442
SG D + WD
Sbjct: 319 TQ-NDEYILSGSKDRGVLFWDKK 340
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 4e-13
Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 29/157 (18%)
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS----CMLTLPN 363
+ V H+ + + + + + +
Sbjct: 4 YLVPYNQRANHSKPIPPFLLDLDSQS-VPDALKKQTNDYYILYNPALPREIDVELHKS-L 61
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP---------- 413
HTS V + ++ + +G + V+ + GS VA +A
Sbjct: 62 DHTSVVCCVKFSNDGEYLATGCNK-TTQVYRV---SDGSLVARLSDDSAANKDPENLNTS 117
Query: 414 --------VTTVEWHPTESSTFASGGADDQIALWDLA 442
+ +V + P + A+G D I +WD+
Sbjct: 118 SSPSSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIE 153
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Length = 393 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 8e-11
Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ +GH + V + + ++ + S S D + WD + + + +L L H + V
Sbjct: 303 EVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKK---SGNPLLML-QGHRNSVIS 357
Query: 372 ISWNRTEP------LIVSGGDDGCIHVWDLRR 397
++ + +G D +W ++
Sbjct: 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 3e-21
Identities = 25/170 (14%), Positives = 62/170 (36%), Gaps = 24/170 (14%)
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
D +I + + + +++ W+P ++ +LA + R+
Sbjct: 18 TQEDDTNSIDSSDDLDGFVKIL---KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLAR 74
Query: 349 T----------------RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392
+ + T+ V ++W+ IV+G ++G + +
Sbjct: 75 IVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRL 134
Query: 393 WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
W+ K G+ + H AP+ +V+W+ + + S ++ LW++
Sbjct: 135 WN----KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVI 179
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 3e-21
Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 36/201 (17%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW----------------TPREAGAWQVDQK 313
L + W+ + +LA G+ + E
Sbjct: 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSA 102
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
TN V L WS + + + +R+W+ T + + L N H + + +
Sbjct: 103 SSGKTTNQVTCLAWSHDGNS-IVTGVENGELRLWNK----TGALLNVL-NFHRAPIVSVK 156
Query: 374 WNRTEPLIVSGGDDGCIHVWD------LRRFK------KGSSVATFKHHTAPVTTVEWHP 421
WN+ I+S + +W+ ++ F+ + + VEW
Sbjct: 157 WNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216
Query: 422 TESSTFASGGADDQIALWDLA 442
F G I ++ +
Sbjct: 217 --DDKFVIPGPKGAIFVYQIT 235
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 4e-21
Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 14/155 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ +G + + +E G ++ + G + D++W +K +I ++
Sbjct: 178 VISGTV---MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK--FVIPGPKGAIFVY 232
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
I K+ L H ++V+ +N T L++S DDG + +W G+S F
Sbjct: 233 Q---ITEKTPTGKL-IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHG---GNGNSQNCF 285
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H+ + + W S D + LW L
Sbjct: 286 YGHSQSIVSASWVGD--DKVISCSMDGSVRLWSLK 318
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 5e-19
Identities = 40/258 (15%), Positives = 87/258 (33%), Gaps = 37/258 (14%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-DLKTALQTVDDPFQLAEH 250
+ +G + + +E G ++ + G + D++W D K + + +
Sbjct: 178 VISGTV---MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFV--Y 232
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIW---TPREAG 306
P GH ++++ T +L + + IW
Sbjct: 233 QITEKT-------PTGKLIGHHGPISVLEFNDT--NKLLLSASDDGTLRIWHGGNGNS-- 281
Query: 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
Q GH+ S+ W +K + SCS+D S+R+W + + +
Sbjct: 282 -----QNCFYGHSQSIVSASWVGDDK--VISCSMDGSVRLWSLK---QNTLLALS-IVDG 330
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
+ ++ DG ++V+DL++ S + + + P ++
Sbjct: 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN--SKSRSLYGNRDGILNPLPIPL-YAS 387
Query: 427 FASGGADDQIA--LWDLA 442
+ S +D I W+ A
Sbjct: 388 YQSSQDNDYIFDLSWNCA 405
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 5e-12
Identities = 25/270 (9%), Positives = 60/270 (22%), Gaps = 70/270 (25%)
Query: 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLGGHTNSAE 227
+ SG + G ++W K I ++ L GH
Sbjct: 201 NHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEKTP-------TGKLIGHHGPIS 251
Query: 228 DLQWS------------------DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS 269
L+++ G F
Sbjct: 252 VLEFNDTNKLLLSASDDGTLRIWHGGN------------------GN-------SQNCFY 286
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329
GH + W + + ++ +W + + + + S
Sbjct: 287 GHSQSIVSASWVGD--DKVISCSMDGSVRLW---SLKQNTL-LALSIVDGVPIFAGRISQ 340
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV-NVISWNRTEPLIVSGGDDG 388
++ A +D + ++D + + + + N + S +D
Sbjct: 341 DGQK-YAVAFMDGQVNVYDLK---KLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDY 396
Query: 389 CIHV-WDLRRFKKGSSVATFKHHTAPVTTV 417
+ W+ + V +
Sbjct: 397 IFDLSWNC---AGNKISVAYSLQEGSVVAI 423
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Length = 425 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 2e-05
Identities = 8/86 (9%), Positives = 22/86 (25%), Gaps = 6/86 (6%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
A ++++ + + L G+ + + + P +S D +
Sbjct: 345 YAVAFMDGQVNVY---DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS 401
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVIS 373
+ + V I
Sbjct: 402 WN--CAGNKISVAY-SLQEGSVVAIP 424
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 96.0 bits (239), Expect = 4e-21
Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 23/172 (13%)
Query: 288 LATGDCKRNIHIW------------TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
A I + +++ K + +V + EK +L
Sbjct: 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+ + + I+D R T + + N V+ I + +++ G G I +WD
Sbjct: 186 VALTNLSRVIIFDIR---TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWD 242
Query: 395 LRRFKKGSSVATFK-HHTAPVTTVEWHPTESS---TFASGGADDQIALWDLA 442
+R + ++ AP+T VE G + + +W+
Sbjct: 243 IR---FNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 87.2 bits (216), Expect = 3e-18
Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 22/164 (13%)
Query: 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR---V 351
R+ ++ R ++ + NS+ SPGE L + S I+IW+ + V
Sbjct: 43 RSPNMGNLR----GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIV 98
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV------- 404
S LT +S V I+ DG I V + +++ S V
Sbjct: 99 GEVYSSSLTYD--CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCEC 156
Query: 405 ------ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
F + V + E S + ++ ++D+
Sbjct: 157 IRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 84.1 bits (208), Expect = 4e-17
Identities = 34/292 (11%), Positives = 68/292 (23%), Gaps = 53/292 (18%)
Query: 192 LATGDCKRNIHIW-TPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL------QTV--- 241
L TG + I IW +++ + A +
Sbjct: 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVL 138
Query: 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW- 300
E K I L +F + + + E +L + I+
Sbjct: 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198
Query: 301 --TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM 358
T + +V + L + I IWD R +
Sbjct: 199 IRTLERLQIIENS-----PRHGAVSSICIDEECCV-LILGTTRGIIDIWDIR---FNVLI 249
Query: 359 LTLPNAHTSDVN----VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV 414
+ + + + + ++V G + +W+ KG F +
Sbjct: 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF---VKGHCQYAFINSDEQP 306
Query: 415 TTVEWHPTESS------------------------TFASGGADDQIALWDLA 442
+ + P E + A I ++ L
Sbjct: 307 SMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLN 358
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 19/180 (10%), Positives = 39/180 (21%), Gaps = 42/180 (23%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
L G + I IW +W VE Q+ ++ S +
Sbjct: 229 LILGTTRGIIDIWDIRFNVLIRSWS---FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285
Query: 345 RIWDTRVINTKSCMLTL-------------PNAHTSDVNVISWNRTE-----------PL 380
IW+ C P + R+ +
Sbjct: 286 TIWN---FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKI 342
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+++ I ++ L +V + + T + +
Sbjct: 343 LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVF---------IPTQVTANLTMLLRKMK 393
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Length = 437 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 2e-05
Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
+F G + S + +L T + +I +++ E + S
Sbjct: 322 NFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL------SSSKAVISPSRFSDV 375
Query: 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSG 384
+ P + ++ + +R + + H +N IS + L+V+
Sbjct: 376 FIP----TQVTANLTMLLRKMKR---TSTHSVDDS-LYHHDIINSISTCEVDETPLLVAC 427
Query: 385 GDDGCIHVW 393
+ G I ++
Sbjct: 428 DNSGLIGIF 436
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 94.1 bits (235), Expect = 6e-21
Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 13/158 (8%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+ TG K + +W P V Q + N + + P L ++
Sbjct: 66 VYTG-GKGCVKVWDISHPGNKS--PVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTL 121
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
IWD T L + ++ + + S DG I VWDL + V
Sbjct: 122 SIWDLAA-PTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDL---HNQTLV 176
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
F+ HT + ++ + + +GG D+ + WDL
Sbjct: 177 RQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLR 213
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 88.3 bits (220), Expect = 5e-19
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 14/156 (8%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRI 346
L G + IW A ++ + L + L SP +V SC D +I +
Sbjct: 112 LIVGGEASTLSIWDL-AAPTPRI-KAELTSSAPACYALAISPDS--KVCFSCCSDGNIAV 167
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
WD ++ + HT + I + + +GG D + WDLR +G +
Sbjct: 168 WDLH---NQTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR---EGRQLQQ 220
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
T+ + ++ + PT A G + + +
Sbjct: 221 HD-FTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVN 254
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 82.5 bits (205), Expect = 4e-17
Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 23/160 (14%)
Query: 287 VLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDL 342
V + NI +W + GHT+ + S G L + +D
Sbjct: 155 VCFSCCSDGNIAVWDLHNQTL-------VRQFQGHTDGASCIDISNDG--TKLWTGGLDN 205
Query: 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
++R WD R + TS + + + T + G + + V +
Sbjct: 206 TVRSWDLR---EGRQLQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHV----NKP 256
Query: 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H + V ++++ F S G D+ + W
Sbjct: 257 DKYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP 295
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 77.5 bits (192), Expect = 2e-15
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 11/125 (8%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
T+ + L + P + LA ++ + K L + H S V + +
Sbjct: 222 DFTSQIFSLGYCPTGEW-LAVGMESSNVEVLHV----NKPDKYQL-HLHESCVLSLKFAY 275
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
VS G D ++ W G+S+ K ++ V + + + +G D +
Sbjct: 276 CGKWFVSTGKDNLLNAWRT---PYGASIFQSK-ESSSVLSCDISV-DDKYIVTGSGDKKA 330
Query: 437 ALWDL 441
++++
Sbjct: 331 TVYEV 335
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 4e-14
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 11/133 (8%)
Query: 314 PLVGH--TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
G + + + D I R + TL H V
Sbjct: 2 YFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPR---HARQINTL--NHGEVVCA 56
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDL--RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
++ + + +GG C+ VWD+ K S + + + + P + T
Sbjct: 57 VTISNPTRHVYTGGKG-CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIV 114
Query: 430 GGADDQIALWDLA 442
GG +++WDLA
Sbjct: 115 GGEASTLSIWDLA 127
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Length = 337 | Back alignment and structure |
|---|
Score = 64.4 bits (158), Expect = 4e-11
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 19/112 (16%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLS 343
LA G N+ + P + L H + V L+++ G + S D
Sbjct: 239 LAVGMESSNVEVLHVNKPDKY--------QLHLHESCVLSLKFAYCG--KWFVSTGKDNL 288
Query: 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+ W T + + +S V + + IV+G D V+++
Sbjct: 289 LNAWRTP---YGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 95.2 bits (236), Expect = 9e-21
Identities = 48/409 (11%), Positives = 120/409 (29%), Gaps = 30/409 (7%)
Query: 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
++ K I + + W+ G ++ + +Q S TA + +
Sbjct: 18 LVFAII-KNCILSFKYQSPNHWEF----AGKWSDDFDKIQESRNTTAKEQQGQSSENENE 72
Query: 251 NKKRGKGPGIPTP--------PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302
NKK G P + + +S E ++A D +++ ++
Sbjct: 73 NKKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDV 132
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
+ + + + + + + + + D I +
Sbjct: 133 DKTSKNVLKLRKRFCFSKRPNAISIAEDDTT-VIIADKFGDVYSIDINSIPEEKFTQEPI 191
Query: 363 NAHTSDVNVISW---NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
H S + + + I++ D I + + H V+++
Sbjct: 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ--CFIVDKWLFGHKHFVSSICC 249
Query: 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479
S G DD+I WD + + L L + +
Sbjct: 250 GK--DYLLLSAGGDDKIFAWDWK----TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303
Query: 480 PQLPGTI--ISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHP--QLPGTIISTAN 535
+ + I + + + + ++ + + +K+ +L P +IS +
Sbjct: 304 DIIEFAVSKIIKSKNLPFVAFFVEATKC-IIILEMSEKQKGDLALKQIITFPYNVISLSA 362
Query: 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI 584
T+ + +++ + +E + +E S + K +S I
Sbjct: 363 HNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVNNEKSNEFDSAII 411
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 88.6 bits (219), Expect = 1e-18
Identities = 42/308 (13%), Positives = 103/308 (33%), Gaps = 18/308 (5%)
Query: 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315
L A+ + + + D +++ + Q+P+
Sbjct: 133 DKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPI 191
Query: 316 VGHTNSVEDLQWSP--GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
+GH + + D+ + + + D I+I + H V+ I
Sbjct: 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP---QCFIVDKWLFGHKHFVSSIC 248
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+ L++S G D I WD K G +++TF +++ ++ + + +
Sbjct: 249 CGKDY-LLLSAGGDDKIFAWDW---KTGKNLSTFDYNSL----IKPYLNDQHLAPPRFQN 300
Query: 434 DQIALWDLAVERDSEIEQRE--AELKDLPSQLLFIHLGQKEIKELHWHP--QLPGTIIST 489
+ + + AV + + + A + ++ + + +K+ +L P +IS
Sbjct: 301 ENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISL 360
Query: 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNL 549
+ T+ + S + + + L+ + + S I SNL
Sbjct: 361 SAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVNNEKSNEFDSAIIQSVQGDSNL 420
Query: 550 TSTEEDNE 557
+ +E+
Sbjct: 421 VTKKEEIY 428
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 68.6 bits (167), Expect = 3e-12
Identities = 49/331 (14%), Positives = 98/331 (29%), Gaps = 30/331 (9%)
Query: 131 TSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTP-PLFSFSGHLTEGFAMDWSSTEP 189
+T ++ + + ++EN+ +L + K P P + + +S E
Sbjct: 56 NTTAKEQQGQSSENENENKKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDES 115
Query: 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS-DLKTAL---QTVDDPF 245
++A D +++ ++ + + + + + + D T + + D +
Sbjct: 116 RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV-Y 174
Query: 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS--STEPGVLATGDCKRNIHIWTPR 303
+ ++ K P GH++ + S + T D +I I
Sbjct: 175 SIDINSIPEEKFTQEP------ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKIS--- 225
Query: 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP- 362
+ K L GH + V + +L S D I WD T + T
Sbjct: 226 HYPQCFIVDKWLFGHKHFVSSICCGKDY--LLLSAGGDDKIFAWD---WKTGKNLSTFDY 280
Query: 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
N+ D V + + K VA F T + +E
Sbjct: 281 NSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340
Query: 423 ESSTFASGGADDQIAL----WDLAVERDSEI 449
+ A I L+ D
Sbjct: 341 QKGDLA---LKQIITFPYNVISLSAHNDEFQ 368
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Length = 450 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 27/205 (13%), Positives = 60/205 (29%), Gaps = 25/205 (12%)
Query: 583 FIRHRGCINRVRTCQYGSTTLAGVW-GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641
F + CI + AG W + K+ TA + + NKK
Sbjct: 20 FAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79
Query: 642 PGIPTP--------PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWS 693
G P + + +S E ++A D +++ ++ +
Sbjct: 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV 139
Query: 694 VYLYTNRFGV--------------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 739
+ L + D +++ + Q+P++GH + +
Sbjct: 140 LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT 199
Query: 740 DLQWSP--GEKRVLASCSVDRSNRI 762
D+ + + + D +I
Sbjct: 200 DVHLIKDSDGHQFIITSDRDEHIKI 224
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 1e-20
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 280 WSSTEPGVLATGDCKRNIHIW-TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
S+ +P +L + + + W + + V + GH++ V+D + S
Sbjct: 25 TSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAY-ALSA 83
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
S D ++R+WD + T H SDV + ++ +I+SG D I VW +
Sbjct: 84 SWDKTLRLWD---VATGETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI--- 136
Query: 399 KKGSSVATFKHHTAPVTTVEWHPTES-----STFASGGADDQIALWDLA 442
KG +AT H V+ V P E T S G D + W+L
Sbjct: 137 -KGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN 184
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 8e-20
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 7/140 (5%)
Query: 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD--TRVINTKSCMLTL 361
+ V + L GH V L S G+ +L S S D ++ W + +
Sbjct: 2 ASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF 61
Query: 362 PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
H+ V + +S D + +WD+ G + F H + V +V+
Sbjct: 62 -KGHSHIVQDCTLTADGAYALSASWDKTLRLWDV---ATGETYQRFVGHKSDVMSVDIDK 117
Query: 422 TESSTFASGGADDQIALWDL 441
++S SG D I +W +
Sbjct: 118 -KASMIISGSRDKTIKVWTI 136
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 5e-19
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 15/136 (11%)
Query: 312 QKPLVGHTNSVEDLQWSPGEK-----RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366
L+GH + V ++ P EK + S D ++ W+ +N H
Sbjct: 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWN---LNQFQIEADF-IGHN 196
Query: 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
S++N ++ + LI S G DG I +W+L ++ T V ++ + P
Sbjct: 197 SNINTLTASPDGTLIASAGKDGEIMLWNL---AAKKAMYTLSAQD-EVFSLAFSP-NRYW 251
Query: 427 FASGGADDQIALWDLA 442
A+ I ++ L
Sbjct: 252 LAAAT-ATGIKVFSLD 266
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 3e-16
Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 21/140 (15%)
Query: 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ +GH +++ L SP G ++AS D I +W+ + K M TL + +V
Sbjct: 189 EADFIGHNSNINTLTASPDG--TLIASAGKDGEIMLWN---LAAKKAMYTL--SAQDEVF 241
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--------HTAPVTTVEWHPT 422
++++ + + I V+ L V + ++ W
Sbjct: 242 SLAFSPNRYWLAAATAT-GIKVFSL---DPQYLVDDLRPEFAGYSKAAEPHAVSLAWSA- 296
Query: 423 ESSTFASGGADDQIALWDLA 442
+ T +G D+ I +W +
Sbjct: 297 DGQTLFAGYTDNVIRVWQVM 316
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Length = 319 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 3e-08
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 17/99 (17%)
Query: 308 WQVD----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-- 361
W + L + V L +SP LA+ + I+++ ++ + + L
Sbjct: 223 WNLAAKKAMYTLSAQ-DEVFSLAFSPNRYW-LAAAT-ATGIKVFS---LDPQYLVDDLRP 276
Query: 362 -----PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
A ++W+ + +G D I VW +
Sbjct: 277 EFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV 315
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 92.6 bits (231), Expect = 1e-20
Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 21/184 (11%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+++ H + S T + I +W + +V + H + V
Sbjct: 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW---QND--KVIKTFSGIHNDVVR 188
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP--LI 381
L SCS D I++ D ++T + T H S V I P I
Sbjct: 189 HLAVVDDGH--FISCSNDGLIKLVD---MHTGDVLRTY-EGHESFVYCIKLL---PNGDI 239
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
VS G+D + +W + GS + +V+ G +D+ + ++
Sbjct: 240 VSCGEDRTVRIWSK---ENGSLKQVITLPAISIWSVDCMSN--GDIIVGSSDNLVRIFSQ 294
Query: 442 AVER 445
R
Sbjct: 295 EKSR 298
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 91.4 bits (228), Expect = 3e-20
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L GH V D+ K +AS S D ++R+W + + + +N +
Sbjct: 12 ATLKGHDQDVRDVVAVDDSK--VASVSRDGTVRLWS---KDDQWLGTVV-YTGQGFLNSV 65
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
++ + L++ GG D I+ L + T H V ++ + SG
Sbjct: 66 CYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQD---GVVISGSW 122
Query: 433 DDQIALWD 440
D +W
Sbjct: 123 DKTAKVWK 130
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 8e-20
Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 26/182 (14%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
PL++ GH ++ + GV+ +G + +W + G+ L H SV
Sbjct: 96 PLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVW---KEGSLV---YNLQAHNASVW 146
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW---NRTEPL 380
D + + + S D +I++W + T H V ++
Sbjct: 147 DAKVVSFSENKFLTASADKTIKLWQ-----NDKVIKTFSGIHNDVVRHLAVVDDGH---- 197
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+S +DG I + D+ G + T++ H + V ++ P + S G D + +W
Sbjct: 198 FISCSNDGLIKLVDM---HTGDVLRTYEGHESFVYCIKLLP--NGDIVSCGEDRTVRIWS 252
Query: 441 LA 442
Sbjct: 253 KE 254
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Length = 313 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 1e-10
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 8/102 (7%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
+ GH + V ++ P + SC D ++RIW S + + +
Sbjct: 219 RTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKE---NGSLKQVI-TLPAISIWSV 272
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV 414
I+ G D + ++ + + +S K
Sbjct: 273 DCMSNG-DIIVGSSDNLVRIFSQEK-SRWASEDEIKGELRSG 312
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 2e-20
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
++ +G R + +W A + L GHT++V + + + S S D ++
Sbjct: 169 DNIIISGSTDRTLKVW---NAETGEC-IHTLYGHTSTVRCMHLHE---KRVVSGSRDATL 221
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+WD I T C+ L H + V + ++ +VSG D + VWD + +
Sbjct: 222 RVWD---IETGQCLHVL-MGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPET---ETCL 272
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
T + HT V ++++ SG D I +WD+
Sbjct: 273 HTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVE 307
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 1e-19
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 28/182 (15%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTN 320
+ + GH + M + +G + +W T + L+GH
Sbjct: 191 CIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQC-------LHVLMGHVA 240
Query: 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380
+V +Q+ R + S + D +++WD T++C+ TL HT+ V + ++
Sbjct: 241 AVRCVQYDG---RRVVSGAYDFMVKVWD---PETETCLHTL-QGHTNRVYSLQFDGI--H 291
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+VSG D I VWD+ + G+ + T H + + +E + SG AD + +WD
Sbjct: 292 VVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWD 345
Query: 441 LA 442
+
Sbjct: 346 IK 347
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 4e-19
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 23/143 (16%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL--PNAHTSDVN 370
L GH + ++ +L S + D +++IWD I T C+ TL PN H S V
Sbjct: 313 HTLTGHQSLTSGMELKD---NILVSGNADSTVKIWD---IKTGQCLQTLQGPNKHQSAVT 366
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-----KHHTAPVTTVEWHPTESS 425
+ +N+ +++ DDG + +WD K G + V + T
Sbjct: 367 CLQFNKN--FVITSSDDGTVKLWD---LKTGEFIRNLVTLESGGSGGVVWRIRASNT-KL 420
Query: 426 TFASGGAD----DQIALWDLAVE 444
A G + ++ + D V+
Sbjct: 421 VCAVGSRNGTEETKLLVLDFDVD 443
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Length = 445 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 25/135 (18%), Positives = 36/135 (26%), Gaps = 12/135 (8%)
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
+ +PL V + + A W L H
Sbjct: 65 EEGIDEPLHIKRRKVIKPGFIHSPWK-SAYIRQHRIDTNWRR---GELKSPKVLK-GHDD 119
Query: 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
V IVSG DD + VW G + T HT V + +
Sbjct: 120 HVIT-CLQFCGNRIVSGSDDNTLKVWSA---VTGKCLRTLVGHTGGVWSSQMRDN---II 172
Query: 428 ASGGADDQIALWDLA 442
SG D + +W+
Sbjct: 173 ISGSTDRTLKVWNAE 187
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 3e-20
Identities = 23/193 (11%), Positives = 54/193 (27%), Gaps = 24/193 (12%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
P+ + D V+AT + ++ + ++ +
Sbjct: 163 PMMVLQLP-ERCYCADVIYPM-AVVATAERGLIVYQLENQP----SEFRRIESPLKHQHR 216
Query: 324 DLQWSPGEKRV---LASCSVDLSIRIWDTRVINTKSCMLTL-----------PNAHTSDV 369
+ ++ A S++ + I N T V
Sbjct: 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276
Query: 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429
N I+++ + + G DG WD + + T + P++ ++ + FA
Sbjct: 277 NGIAFHPVHGTLATVGSDGRFSFWDK---DARTKLKTSEQLDQPISACCFNHN-GNIFAY 332
Query: 430 GGADDQIALWDLA 442
+ D +
Sbjct: 333 ASSYDWSKGHEFY 345
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 8e-20
Identities = 34/179 (18%), Positives = 59/179 (32%), Gaps = 24/179 (13%)
Query: 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326
S G T GF +S + + + + D + +S+ L
Sbjct: 2 SLFGT-TSGFGTSGTS----MFGSATTDNHNPMK----------DIEVTSSPDDSIGCLS 46
Query: 327 WSP--GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+SP L + S +R W+ + + ++ HT V + W+ + +
Sbjct: 47 FSPPTLPGNFLIAGSWANDVRCWEVQ-DSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTA 104
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLA 442
D +WDL + H APV T+ W S +G D + WD
Sbjct: 105 SCDKTAKMWDL----SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 1e-16
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 15/148 (10%)
Query: 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT 354
++ W +++G Q K HT V D+ WS +V + S D + ++WD +++
Sbjct: 64 NDVRCWEVQDSG--QTIPKAQQMHTGPVLDVCWSDDGSKV-FTASCDKTAKMWD---LSS 117
Query: 355 KSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
+ + H + V I W + +++G D + WD R + + +
Sbjct: 118 NQA-IQI-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS---SNPMMVLQLPER 172
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWD 440
+P + A+ + +
Sbjct: 173 CYCADVIYPM--AVVATAERGLIVYQLE 198
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 7e-14
Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW--SPGEKRVLASCSVDLSIR 345
+ T C + +W + + H V+ + W +P + + S D +++
Sbjct: 101 VFTASCDKTAKMW-DLSSNQ----AIQIAQHDAPVKTIHWIKAPNYSC-VMTGSWDKTLK 154
Query: 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
WDTR + + M+ L P+ V + + V+ L +
Sbjct: 155 FWDTR---SSNPMMVL-QLPERCYCADVIY---PMAVVATAERGLIVYQLEN-QPSEFRR 206
Query: 406 TFKHHTAPVTTVEWHP---TESSTFASGGADDQIALWDL 441
V + + FA G + ++A+ +
Sbjct: 207 IESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Length = 368 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-10
Identities = 26/231 (11%), Positives = 54/231 (23%), Gaps = 52/231 (22%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
P+ + D V+AT + ++ + ++ + PL
Sbjct: 163 PMMVLQLP-ERCYCADVIYPM-AVVATAERGLIVYQLE-NQPSEFRRIESPLKHQHRCVA 219
Query: 228 ---DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
D Q AL +++ P P F+F H + G
Sbjct: 220 IFKDKQNKPTGFALGSIEG------RVAIHYINPPNPAKDNFTFKCHRSNG--------- 264
Query: 285 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+V + + P LA+ D
Sbjct: 265 --------------------------TNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRF 297
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
WD + ++ + T ++ +N + +
Sbjct: 298 SFWD---KDARTKLKTSEQ-LDQPISACCFNHNGNIFAYASSYDWSKGHEF 344
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 5e-20
Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 20/141 (14%)
Query: 313 KPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN- 370
K VGH + V + +SP R + S + I++W+ K H+ V+
Sbjct: 112 KRFVGHQSEVYSVAFSPDN--RQILSAGAEREIKLWNIL-GECKFSSAEK-ENHSDWVSC 167
Query: 371 ---------VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
P S G DG + VW+ TFK H + V + P
Sbjct: 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT----NFQIRYTFKAHESNVNHLSISP 223
Query: 422 TESSTFASGGADDQIALWDLA 442
A+GG D ++ +WD+
Sbjct: 224 -NGKYIATGGKDKKLLIWDIL 243
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 2e-19
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 18/166 (10%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
L +G + + IW + G + + K L GH + V DL S S S D ++
Sbjct: 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF-AISSSWDKTL 100
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
R+WD + T + H S+V ++++ I+S G + I +W++ + S
Sbjct: 101 RLWD---LRTGTTYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSS 155
Query: 405 ATFKHHTAPVTTVEWHP---------TESSTFASGGADDQIALWDL 441
A ++H+ V+ V + P + FAS G D ++ +W+
Sbjct: 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT 201
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 1e-17
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 16/145 (11%)
Query: 308 WQVDQKPLVGHTNSV------EDLQWSPGEKRVLASCSVDLSIRIWDT----RVINTKSC 357
V + L GH++ V + + L S S D ++ IW +
Sbjct: 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPV-LISGSRDKTVMIWKLYEEEQNGYFGIP 68
Query: 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
L H V+ ++ ++ +S D + +WDL + G++ F H + V +V
Sbjct: 69 HKAL-TGHNHFVSDLALSQENCFAISSSWDKTLRLWDL---RTGTTYKRFVGHQSEVYSV 124
Query: 418 EWHPTESSTFASGGADDQIALWDLA 442
+ P ++ S GA+ +I LW++
Sbjct: 125 AFSP-DNRQILSAGAEREIKLWNIL 148
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 22/149 (14%)
Query: 308 WQVDQK---PLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
W + + H ++V L SP G + +A+ D + IWD I +
Sbjct: 199 WNTNFQIRYTFKAHESNVNHLSISPNG--KYIATGGKDKKLLIWD---ILNLTYPQRE-F 252
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL----------RRFKKGSSVATFKHHTAP 413
S +N I++N + G D + +++L + + K
Sbjct: 253 DAGSTINQIAFNPKLQWVAVGTDQ-GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ 311
Query: 414 VTTVEWHPTESSTFASGGADDQIALWDLA 442
T++ W+ +G D I +
Sbjct: 312 CTSLAWNA-LGKKLFAGFTDGVIRTFSFE 339
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 5e-09
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 19/114 (16%)
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP------LIVSGGDDGCIHV 392
+ + S+ I K +L H+ V I ++ +++SG D + +
Sbjct: 2 ADNSSLDIQV-----VKRGILE---GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMI 53
Query: 393 WDLRR----FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
W L G H V+ + E+ S D + LWDL
Sbjct: 54 WKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLR 106
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Length = 343 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-05
Identities = 10/62 (16%), Positives = 15/62 (24%), Gaps = 6/62 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L T + G L W+ K+ L + D IR +
Sbjct: 283 LMTQSKAP-----VCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK-LFAGFTDGVIRTF 336
Query: 348 DT 349
Sbjct: 337 SF 338
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 6e-20
Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 30/200 (15%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNS 321
+ S ++D S G++ATG + I T R ++ ++ ++NS
Sbjct: 179 VESPMTPSQFATSVDISER--GLIATGFNNGTVQISELSTLRPLYNFESQH-SMINNSNS 235
Query: 322 VEDLQWSPGEKRVLASCSVD---LSIRIWDT---------RVINTKSCMLTLPNAHTSDV 369
+ +++SP LA I +++T V S AH+S V
Sbjct: 236 IRSVKFSPQGSL-LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV 294
Query: 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV----TTVEWHPTESS 425
+S+N + + S G DG + WD++ + T H + +
Sbjct: 295 MSLSFNDSGETLCSAGWDGKLRFWDVKT---KERITTLNMHCDDIEIEEDILAVDE-HGD 350
Query: 426 TFASGGADD---QIALWDLA 442
+ A G D W
Sbjct: 351 SLAEPGVFDVKFLKKGWRSG 370
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 9e-17
Identities = 26/211 (12%), Positives = 67/211 (31%), Gaps = 52/211 (24%)
Query: 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--------------TPREAGAWQVD 311
+ S L D K +IW Q
Sbjct: 129 WGASNDRLLS----------HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT 178
Query: 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDT---RVINTKSCMLTLPNAHTS 367
+ + + + S G ++A+ + +++I + R + ++ +++
Sbjct: 179 VESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSM-INNSN 234
Query: 368 DVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKH-------------HT 411
+ + ++ L+ D GCI +++ + G + + H+
Sbjct: 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYET---EFGERIGSLSVPTHSSQASLGEFAHS 291
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ V ++ ++ + T S G D ++ WD+
Sbjct: 292 SWVMSLSFNDS-GETLCSAGWDGKLRFWDVK 321
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 1e-10
Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 84/287 (29%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGAWQVDQKPLGGHTNS 225
+ S ++D S G++ATG + I T R ++ + ++NS
Sbjct: 179 VESPMTPSQFATSVDISER--GLIATGFNNGTVQISELSTLRPLYNFESQH-SMINNSNS 235
Query: 226 AEDLQWS-DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 284
+++S LA H S++
Sbjct: 236 IRSVKFSPQGSL----------LA--------------------IAH--------DSNSF 257
Query: 285 PGV----LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCS 339
+ G+ ++ + T H++ V L ++ G L S
Sbjct: 258 GCITLYETEFGERIGSLSVPTHSSQ-----ASLGEFAHSSWVMSLSFNDSG--ETLCSAG 310
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDV----NVISWNRTEPLIVSGGDDGCIHVWDL 395
D +R WD + TK + TL N H D+ ++++ + + G +D+
Sbjct: 311 WDGKLRFWDVK---TKERITTL-NMHCDDIEIEEDILAVDEHGDSLAEPGV------FDV 360
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ KKG + + D I + A
Sbjct: 361 KFLKKGWRSGMGADL-------------NESLCCVCLDRSIRWFREA 394
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 15/152 (9%), Positives = 33/152 (21%), Gaps = 35/152 (23%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI---- 372
H + + SCS D +++WD + +++ V+
Sbjct: 14 AHDADIFSVSACN---SFTVSCSGDGYLKVWDNK---LLDNENPKDKSYSHFVHKSGLHH 67
Query: 373 --------------------SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
S++ +D V + + K H+
Sbjct: 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL---DLLDSDMKKHSF 124
Query: 413 PVTTVEWHP--TESSTFASGGADDQIALWDLA 442
S + +W
Sbjct: 125 WALKWGASNDRLLSHRLVATDVKGTTYIWKFH 156
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Length = 397 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 6e-09
Identities = 14/134 (10%), Positives = 34/134 (25%), Gaps = 30/134 (22%)
Query: 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP------LIVS 383
G+ D + ++ + + W +V+
Sbjct: 91 GDLLFYRITREDETKKVIFE---KLDLLDSDM---KKHSFWALKWGA-SNDRLLSHRLVA 143
Query: 384 GGDDGCIHVWDLRRFKKGSSVATFKH---------------HTAPVTTVEWHPTESSTFA 428
G ++W F S+ T + T+V+ A
Sbjct: 144 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE--RGLIA 201
Query: 429 SGGADDQIALWDLA 442
+G + + + +L+
Sbjct: 202 TGFNNGTVQISELS 215
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-19
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L GH + ++++ E +L SCS D S +W + + TL + HT + I
Sbjct: 26 IKLTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSL---NGERLGTL-DGHTGTIWSI 80
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG-- 430
+ V+G D I +WD+ G VAT+K PV VE+ P + F +
Sbjct: 81 DVDCFTKYCVTGSADYSIKLWDV---SNGQCVATWKSPV-PVKRVEFSP-CGNYFLAILD 135
Query: 431 ---GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480
I +++ +ERDS + ++ P + H G W
Sbjct: 136 NVMKNPGSINIYE--IERDSATHELTKVSEE-PIHKIITHEGLDAATVAGWST 185
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 4e-19
Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 33/172 (19%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
+ G I + E + H S+ D+Q+SP + S D +
Sbjct: 190 IIAGHKDGKISKYDVSNNYEYV------DSIDLHEKSISDMQFSPDLTY-FITSSRDTNS 242
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--------------DDGCI 390
+ D T + +N + I+ GG
Sbjct: 243 FLVDVS---TLQVLKKY--ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEA 297
Query: 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + + H P+ TV P +++ASGG D I L
Sbjct: 298 RFYHK---IFEEEIGRVQGHFGPLNTVAISPQ-GTSYASGGEDGFIRLHHFE 345
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-14
Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 25/147 (17%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDL-----SIRIWDTRVINTKSCMLTLP----- 362
V+ +++SP + ++ SI I++ I S L
Sbjct: 110 ATWKSPV-PVKRVEFSPCGNY-FLAILDNVMKNPGSINIYE---IERDSATHELTKVSEE 164
Query: 363 -------NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415
+ V W+ I++G DG I +D+ V + H ++
Sbjct: 165 PIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVS--NNYEYVDSIDLHEKSIS 222
Query: 416 TVEWHPTESSTFASGGADDQIALWDLA 442
+++ P + + F + D L D++
Sbjct: 223 DMQFSP-DLTYFITSSRDTNSFLVDVS 248
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 1e-14
Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 32/157 (20%)
Query: 308 WQVD----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
W L GHT ++ + K + S D SI++WD + C+ T
Sbjct: 59 WYSLNGERLGTLDGHTGTIWSIDVDCFTKY-CVTGSADYSIKLWDV---SNGQCVATWK- 113
Query: 364 AHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKGSSVATFKHHTA------ 412
V + ++ ++ D+ G I+++++ R S+ +
Sbjct: 114 -SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIER---DSATHELTKVSEEPIHKI 169
Query: 413 -------PVTTVEWHPTESSTFASGGADDQIALWDLA 442
T W +G D +I+ +D++
Sbjct: 170 ITHEGLDAATVAGWSTK-GKYIIAGHKDGKISKYDVS 205
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 1e-13
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 8/108 (7%)
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
++ + + L H + + +N+ L+ S D VW
Sbjct: 5 HHHHHHSSGENLYFQ---GSHMKAIKL-TGHERPLTQVKYNKEGDLLFSCSKDSSASVWY 60
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
G + T HT + +++ + +G AD I LWD++
Sbjct: 61 S---LNGERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSIKLWDVS 104
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Length = 369 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 27/151 (17%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV------------- 334
T N + + QV K + +P ++ +
Sbjct: 233 FITSSRDTNSFLV---DVSTLQV-LKKYETDC-PLNTAVITPLKEFIILGGGQEAKDVTT 287
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
++ R + + + + H +N ++ + SGG+DG I +
Sbjct: 288 TSANEGKFEARFYH---KIFEEEIGRV-QGHFGPLNTVAISPQGTSYASGGEDGFIRLHH 343
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESS 425
F+K + A + H E++
Sbjct: 344 ---FEKSYFDFKYDVEKAA--EAKEHMQEAN 369
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 6e-19
Identities = 36/185 (19%), Positives = 57/185 (30%), Gaps = 12/185 (6%)
Query: 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318
G P + S ++ A V + + H
Sbjct: 327 GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAA-----AGLVLKGTMRAH 381
Query: 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWD--TRVINTKSCMLTLPNAHTSDVNVISWNR 376
T+ V + ++ S S D SI +W L H+ V + +
Sbjct: 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSS 440
Query: 377 TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
+SG DG + +WDL G S F HT V +V + ++ S D I
Sbjct: 441 DGQFALSGSWDGELRLWDL---AAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTI 496
Query: 437 ALWDL 441
LW+
Sbjct: 497 KLWNT 501
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 1e-18
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 31/158 (19%)
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIW 347
G+CK I + GH + V +++SP + + S S D ++++W
Sbjct: 501 TLGECKYTI--------------SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSV 404
+ ++ TL HT V+ ++ + P L SGG DG + +WDL +G +
Sbjct: 547 N---LSNCKLRSTL-AGHTGYVSTVAVS---PDGSLCASGGKDGVVLLWDL---AEGKKL 596
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + ++ + + + P + + I +WDL
Sbjct: 597 YSLEANS-VIHALCFSP-NRYWLCAAT-EHGIKIWDLE 631
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-13
Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 30/150 (20%)
Query: 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L GHT V + SP G + AS D + +WD + + +L A++ ++
Sbjct: 554 RSTLAGHTGYVSTVAVSPDG--SLCASGGKDGVVLLWD---LAEGKKLYSL-EANSV-IH 606
Query: 371 --VISWNRTEPLIVSGGDDGCIHVWDL----------------RRFKKGSSVATFKHHTA 412
S NR + + I +WDL S A K
Sbjct: 607 ALCFSPNRY---WLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVI 663
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWDLA 442
T++ W + ST SG D I +W +
Sbjct: 664 YCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 8e-09
Identities = 27/134 (20%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ +V + R + AHT V
Sbjct: 333 IPQMSAFWYAVRTAVINAASGRQTVDA-----ALAAAQTNAAAGLVLKGTMRAHTDMVTA 387
Query: 372 ISWNRTEP-LIVSGGDDGCIHVWDLRRFKK--GSSVATFKHHTAPVTTVEWHPTESSTFA 428
I+ +IVS D I +W L + K G + H+ V V +
Sbjct: 388 IATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFAL 446
Query: 429 SGGADDQIALWDLA 442
SG D ++ LWDLA
Sbjct: 447 SGSWDGELRLWDLA 460
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Length = 694 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 1e-05
Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 24/104 (23%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL----------- 361
L ++ + L +SP L + + + I+IWD + +KS + L
Sbjct: 597 YSLEANS-VIHALCFSPNRYW-LCAAT-EHGIKIWD---LESKSIVEDLKVDLKAEAEKA 650
Query: 362 -------PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
++W+ + SG DG I VW + R+
Sbjct: 651 DNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGRY 694
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 2e-18
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 18/136 (13%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
+ L GH + LQ+ R++ S S D +IR+WD I +C+ L H V I
Sbjct: 290 RTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWD---IECGACLRVL-EGHEELVRCI 342
Query: 373 SWNRTEPLIVSGGDDGCIHVWDL------RRFKKGSSVATFKHHTAPVTTVEWHPTESST 426
++ IVSG DG I VWDL R + T H+ V +++
Sbjct: 343 RFDNK--RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD---EFQ 397
Query: 427 FASGGADDQIALWDLA 442
S DD I +WD
Sbjct: 398 IVSSSHDDTILIWDFL 413
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 2e-18
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 16/155 (10%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ +G I IW + + L GHT SV LQ+ RV+ + S D ++R+W
Sbjct: 146 IVSGLRDNTIKIWDK-NTLECK---RILTGHTGSVLCLQYDE---RVIITGSSDSTVRVW 198
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D +NT + TL H V + +N ++V+ D I VWD+ +
Sbjct: 199 D---VNTGEMLNTL-IHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVL 252
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
H A V V++ S D I +W+ +
Sbjct: 253 VGHRAAVNVVDFD---DKYIVSASGDRTIKVWNTS 284
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 1e-16
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 12/130 (9%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L+ H +V L+++ ++ +CS D SI +WD + L H + VNV+
Sbjct: 207 NTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVV 262
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
++ IVS D I VW+ V T H + +++ SG +
Sbjct: 263 DFDDK--YIVSASGDRTIKVWNT---STCEFVRTLNGHKRGIACLQYRDR---LVVSGSS 314
Query: 433 DDQIALWDLA 442
D+ I LWD+
Sbjct: 315 DNTIRLWDIE 324
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 7e-14
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 15/112 (13%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT------RVINTKSCMLTLPNAH 365
+ L GH V +++ + + S + D I++WD R C+ TL H
Sbjct: 329 LRVLEGHEELVRCIRFDN---KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEH 384
Query: 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
+ V + ++ IVS D I +WD F + + T
Sbjct: 385 SGRVFRLQFDEF--QIVSSSHDDTILIWD---FLNDPAAQAEPPRSPSRTYT 431
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Length = 435 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 6e-07
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 365 HTSDVNVI-SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
+ + + IVSG D I +WD HT V +++
Sbjct: 129 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDK---NTLECKRILTGHTGSVLCLQYDER- 184
Query: 424 SSTFASGGADDQIALWDLA 442
+G +D + +WD+
Sbjct: 185 --VIITGSSDSTVRVWDVN 201
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 84.2 bits (209), Expect = 4e-17
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372
L GHT+ + + KR S S+D +IRIWD + M TL HT+ V ++
Sbjct: 304 YILSGHTDRIYSTIYDHERKR-CISASMDTTIRIWD---LENGELMYTL-QGHTALVGLL 358
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432
+ +VS DG I WD S HHT ++ + + SG
Sbjct: 359 RLSDK--FLVSAAADGSIRGWDA----NDYSRKFSYHHTNLSAITTFYVS-DNILVSGS- 410
Query: 433 DDQIALWDLA 442
++Q +++L
Sbjct: 411 ENQFNIYNLR 420
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 2e-16
Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 30/152 (19%)
Query: 313 KPLVGHTNSVEDLQ--WSPGEKRVLASCSVDLSIRIWDTR-------------------- 350
GH ++V L K + + S D ++ +W
Sbjct: 197 HVFEGHNSTVRCLDIVEYKNIKY-IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 255
Query: 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410
+ L H + V +S + ++VSG D + VWD+ + + H
Sbjct: 256 PEENPYFVGVL-RGHMASVRTVSGHGN--IVVSGSYDNTLIVWDV---AQMKCLYILSGH 309
Query: 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
T + + + E S D I +WDL
Sbjct: 310 TDRIYSTIYDH-ERKRCISASMDTTIRIWDLE 340
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 3e-15
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 308 WQVD----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363
W ++ L GHT V L+ S + L S + D SIR WD N S +
Sbjct: 337 WDLENGELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDA---NDYSRKFSY-- 388
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPT 422
HT+ + ++ ++ ++VSG ++ ++++L + G V A + +V +
Sbjct: 389 HHTNLSAITTFYVSDNILVSGSEN-QFNIYNL---RSGKLVHANILKDADQIWSVNFKGK 444
Query: 423 ESSTFASGGADDQIALWDL 441
T + D + ++
Sbjct: 445 ---TLVAAVEKDGQSFLEI 460
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Length = 464 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 4e-15
Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 12/141 (8%)
Query: 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362
E L + R L+ ++ W TL
Sbjct: 62 SENFVSPKGFNSLNLKLSQKYPKLSQQDRLR-LSFLENIFILKNWYN--PKFVPQRTTLR 118
Query: 363 NAHTSDVN-VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
H + V + + +++G DD I V+D + H V +++
Sbjct: 119 -GHMTSVITCLQFEDN--YVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYAH 172
Query: 422 TESSTFASGGADDQIALWDLA 442
SG D + +WD+
Sbjct: 173 --GGILVSGSTDRTVRVWDIK 191
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 81.8 bits (202), Expect = 7e-17
Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 6/202 (2%)
Query: 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317
L + ++ + G + I + ++Q L
Sbjct: 42 IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA----LTN 97
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN--VISWN 375
+ ++ + L + S D I + D R + N++ + V + + +
Sbjct: 98 NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
++ G ++ + + L + + + V P E +A D +
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217
Query: 436 IALWDLAVERDSEIEQREAELK 457
+A+ + D + +
Sbjct: 218 VAVEFFDDQGDDYNSSKRFAFR 239
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 24/173 (13%), Positives = 56/173 (32%), Gaps = 8/173 (4%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L ++ ++ + A VD + + + + + + +V I
Sbjct: 26 LLITSWDGSLTVYKF-DIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLR-RFKKGSSVA 405
D + L + +++ + + +++ DG I V D R +V
Sbjct: 85 D---LIGSPSFQAL-TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVK 140
Query: 406 TFKHHTAPVTTVEWHPTESST-FASGGADDQIALWDLAVERDSEIEQREAELK 457
+ V + +S+ G + Q+ + L + D E+ LK
Sbjct: 141 NLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 71.4 bits (175), Expect = 2e-13
Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 18/178 (10%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASC 338
L I + PR G + K L + V++ ++ L
Sbjct: 107 ICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVG 166
Query: 339 SVDLSIRIWDTRV--INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVW--- 393
+ ++ + + + + + DV ++ + DG + V
Sbjct: 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE--GYACSSIDGRVAVEFFD 224
Query: 394 DLRRFKKGSSVATFKHH---------TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
D S F+ H PV ++E+ P + G+D I+ W+L
Sbjct: 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQ 281
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 5e-12
Identities = 39/295 (13%), Positives = 83/295 (28%), Gaps = 44/295 (14%)
Query: 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG 221
L + ++ + G + I + ++Q L
Sbjct: 42 IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA----LTN 97
Query: 222 HTNSAEDLQWSDLKTAL-------QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274
+ + + + ++ + + I L S + +
Sbjct: 98 NEANLGICRICKYGDDKLIAASWDGLI----EV--IDPRNYGDGVIAVKNLNSNNTKVKN 151
Query: 275 G-FAMDWSSTEPGVLATGDCKRNIHIWTPR--EAGAWQVDQKPLVGHTNSVEDLQWSPGE 331
F MD +S+ L G + + E +++ L V P E
Sbjct: 152 KIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV---ALLPKE 205
Query: 332 KRVLASCSVD--LSIRIWDTRVINTKSCMLTLPNAH---------TSDVNVISWNRTEPL 380
+ A S+D +++ +D + + S H VN I ++
Sbjct: 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265
Query: 381 IVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADD 434
+ + G DG I W+L + + F K + V + + +DD
Sbjct: 266 LYTAGSDGIISCWNL---QTRKKIKNFAKFNEDSVVKIACSD---NILCLATSDD 314
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Length = 342 | Back alignment and structure |
|---|
Score = 62.6 bits (152), Expect = 2e-10
Identities = 12/84 (14%), Positives = 27/84 (32%)
Query: 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418
+ + A ++ I ++ L++ DG + V+ K + + P+
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 419 WHPTESSTFASGGADDQIALWDLA 442
+ G +I DL
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLI 87
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 84.2 bits (207), Expect = 1e-16
Identities = 33/246 (13%), Positives = 87/246 (35%), Gaps = 33/246 (13%)
Query: 263 PPLFSFSGHLTEGF-----AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317
+FS + G A + T+ +LA +HI+ G QV+ +
Sbjct: 3 NKIFSLAETNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIY-----GQQQVEVVIKLE 56
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
++++++++ G L + ++ + + ++ + T+ + I + +
Sbjct: 57 DRSAIKEMRFVKGIY--LVVINAKDTVYVLS---LYSQKVLTTV--FVPGKITSIDTDAS 109
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKG--------SSVATFKHHTAPVTTVEWHPTESSTFAS 429
++ G +G + V+D+ R + S +P+ +++W+P + T
Sbjct: 110 LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169
Query: 430 GGADDQIALWDLA---VERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486
+ + L +++ E S+ ++ + +HP
Sbjct: 170 SY-EYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR-TPKVIQSLYHPN--SLH 225
Query: 487 ISTANS 492
I T +
Sbjct: 226 IITIHE 231
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 72.6 bits (177), Expect = 3e-13
Identities = 23/179 (12%), Positives = 47/179 (26%), Gaps = 29/179 (16%)
Query: 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345
L + K +++ + V + + + + S+
Sbjct: 70 IYLVVINAKDTVYVLSLY-----SQKVLTTVFVPGKITSIDTDASLDW-MLIGLQNGSMI 123
Query: 346 IWDTR-------VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398
++D ++ P A S + I WN + V + + L
Sbjct: 124 VYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVEN 183
Query: 399 K---------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ S T + T V +HP S + D+ + WD
Sbjct: 184 EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDAN 241
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 2e-07
Identities = 28/266 (10%), Positives = 73/266 (27%), Gaps = 49/266 (18%)
Query: 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTE 423
+S +++ T+ L+ G +H++ ++ + K + + + +
Sbjct: 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE-----VVIKLEDRSAIKEMRFVK-- 68
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
A D + + L + ++L +I + L
Sbjct: 69 GIYLVVINAKDTVYVLSLYSQ-----------------KVLTTVFVPGKITSIDTDASLD 111
Query: 484 GTIISTAN---------SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534
+I N + +L F I + W+P+ GT++ +
Sbjct: 112 WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171
Query: 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVR 594
+ ++ + + + ++R V+ S + + I
Sbjct: 172 EYVTLTY-SLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII--- 227
Query: 595 TCQYGSTTLAGVWGEVGKVGIWDLKT 620
E + WD +
Sbjct: 228 -----------TIHEDNSLVFWDANS 242
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} Length = 902 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 2e-06
Identities = 23/181 (12%), Positives = 47/181 (25%), Gaps = 13/181 (7%)
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
+ ++L W + SV + + K +L
Sbjct: 386 FTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK---GGVRTKRQKL 442
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRR--------FKKGSSVATFKHHTAPVTTVEWHPTESS 425
++G +G + ++D F+ S K V + + E+
Sbjct: 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAA-ETL 501
Query: 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485
A + L+ V + +E E DL L + + P
Sbjct: 502 ELAVSIETGDVVLFKYEVNQFYSVEN-RPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTG 560
Query: 486 I 486
+
Sbjct: 561 V 561
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 81.3 bits (200), Expect = 2e-16
Identities = 60/352 (17%), Positives = 103/352 (29%), Gaps = 62/352 (17%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251
LATGD + I+ Q + + H S + + + D + E
Sbjct: 43 LATGDKGGRVVIF-------QQEQENKIQSH--SRGEYNVYSTFQSHEPEFDYLKSLEIE 93
Query: 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQV 310
+K + W + + I +W E +
Sbjct: 94 EK---------------------INKIRWLPQKNAAQFLLSTNDKTIKLWKISE-RDKRP 131
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
+ L D RV +DL + R NAHT +N
Sbjct: 132 EGYNLKEEDGRYRDPTTVTT-LRVPVFRPMDLMVEASPRR---------IFANAHTYHIN 181
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV-----ATFKHHTAPVTTVEWHPTESS 425
IS N +S DD I++W L + ++ A + T +T E+HP +
Sbjct: 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN 240
Query: 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485
TF + I L D+ R + L D S+L +
Sbjct: 241 TFVYSSSKGTIRLCDM----------RASALCDRHSKLFEEPEDPSNRSFFSEI---ISS 287
Query: 486 IISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 536
I S T L ++ +++ + ++ H L + S +
Sbjct: 288 ISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEN 339
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 64.4 bits (156), Expect = 7e-11
Identities = 34/298 (11%), Positives = 79/298 (26%), Gaps = 51/298 (17%)
Query: 181 AMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ 239
+ W + + I +W E + + L D
Sbjct: 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISE-RDKRPEGYNLKEEDGRYRDPTTVTTLRVPV 156
Query: 240 TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299
+ ++ H ++ +S L+ D I++
Sbjct: 157 FRPMDLMVEASPRRIFAN------------AHTYHINSISINSDYETYLSADD--LRINL 202
Query: 300 WTPREAG----AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR----- 350
W + + T + ++ P S +IR+ D R
Sbjct: 203 WHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262
Query: 351 -------VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403
+ + S ++ + ++ + +++ D + VWDL +
Sbjct: 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR-DYLSVKVWDLNMENR--P 319
Query: 404 VATFKHHTAPVT---------------TVEWHPTESSTFASGGADDQIALWDLAVERD 446
V T++ H + W+ S +G ++ ++D +RD
Sbjct: 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRD 376
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 2e-09
Identities = 22/210 (10%), Positives = 54/210 (25%), Gaps = 33/210 (15%)
Query: 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ-- 309
+ + I + A ++ K I + R +
Sbjct: 206 EITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265
Query: 310 ----------VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML 359
++ +S+ D+++S R + + LS+++WD +
Sbjct: 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRD-YLSVKVWDLN--MENRPVE 321
Query: 360 TLP--------------NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
T N D WN ++ ++++G + ++D +
Sbjct: 322 TYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN---TKRDIT 378
Query: 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQ 435
P + D+
Sbjct: 379 LEASRENNKPRTVLKPRKVCASGKRKKDEI 408
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 4e-04
Identities = 42/380 (11%), Positives = 103/380 (27%), Gaps = 83/380 (21%)
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
++G G W + KG+ ++TVE++ + A+G ++ ++
Sbjct: 1 MAGAGGGNDIQWCFSQ-VKGAVDDDVAE-ADIISTVEFNHS-GELLATGDKGGRVVIFQQ 57
Query: 442 AVERDSEIEQR-------EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494
E + R + + L +++I ++ W PQ + +
Sbjct: 58 EQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND- 116
Query: 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554
+TI + + K + + R + E
Sbjct: 117 ---KTI--------KLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVE 165
Query: 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614
+ R + + H IN + T L+ + ++
Sbjct: 166 ASPRRI---------------------FANAHTYHINSISINSDYETYLSA---DDLRIN 201
Query: 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT 674
+W L+ ++ + I + A ++
Sbjct: 202 LWHLEITDRSFN-----------------IVDIKPANMEELTEVITAAEFHPNSCNTFVY 244
Query: 675 GDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 734
K I + R A+ C R+ ++ E ++
Sbjct: 245 SSSKGTIRLCDMR-----------------ASALCDRHSKLFEEPEDP---SNRSFFSEI 284
Query: 735 TNSVEDLQWSPGEKRVLASC 754
+S+ D+++S + ++
Sbjct: 285 ISSISDVKFSHSGRYMMTRD 304
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Length = 447 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 7e-04
Identities = 30/279 (10%), Positives = 67/279 (24%), Gaps = 48/279 (17%)
Query: 156 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 215
+ + I + A ++ K I + R +
Sbjct: 206 EITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265
Query: 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTE 274
K + + +S++ +++ V FS SG ++
Sbjct: 266 SKLFEEPEDPSNRSFFSEIISSISDVK-----------------------FSHSGRYMMT 302
Query: 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334
S + + + + + + W+ + V
Sbjct: 303 R--DYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFEC---CWNGSDSVV 357
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+ S + R++D +TL + ++ + I V
Sbjct: 358 -MTGSYNNFFRMFDRN----TKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDS 412
Query: 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
L KK + WHP E+ A +
Sbjct: 413 LDFNKK-------------ILHTAWHPKENI-IAVATTN 437
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 78.3 bits (192), Expect = 1e-15
Identities = 17/169 (10%), Positives = 47/169 (27%), Gaps = 16/169 (9%)
Query: 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-----GHTNSVEDLQWSP-GEKRV 334
P +++ G C R + ++ + ++ N + +
Sbjct: 82 GGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEY 141
Query: 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394
+I S + + + ++ L+ DG + V++
Sbjct: 142 FIWADNRGTIGFQS---YEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198
Query: 395 LRRFKKGSSVATF--KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
L ++ A + V++ + + D + +DL
Sbjct: 199 LS---SPDQASSRFPVDEEAKIKEVKFAD--NGYWMVVECDQTVVCFDL 242
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 70.6 bits (172), Expect = 4e-13
Identities = 19/176 (10%), Positives = 50/176 (28%), Gaps = 12/176 (6%)
Query: 269 SGHLTEGFAMDWSSTEPGV-LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
E M + D + I + + + V +S
Sbjct: 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSG---VL 178
Query: 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGD 386
+ +LA S D + +++ + + P + + + + +V D
Sbjct: 179 HK-DSLLLALYSPDGILDVYNLS---SPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD 234
Query: 387 DGCIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ +DLR+ + T+ T + + + A + + ++
Sbjct: 235 Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYK 289
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 1e-09
Identities = 28/252 (11%), Positives = 68/252 (26%), Gaps = 38/252 (15%)
Query: 301 TPREAGAWQVDQKP-LVGHTNSVEDLQWSPGE---------KRVLASCSVDLSIRIWDTR 350
+A W + + L+ N +++ P + K V D ++ +
Sbjct: 7 GKLKAPKWPILKNLELLQAQNYSRNIKTFPYKELNKSMYYDKWVCMCRCEDGALHFTQLK 66
Query: 351 VINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK- 408
T + + T P +IS L++ + I + D K + +
Sbjct: 67 DSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQ-ITILDS---KTNKVLREIEV 122
Query: 409 HHTAPVTTVEWHPTESST-FASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467
+ + H ++ F I + ++
Sbjct: 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS---------------QYIVHSA 167
Query: 468 LGQKEIKELHWHPQLPGTIISTA--NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525
E H +++ + +++ S + F + +IKE+ +
Sbjct: 168 KSDVEYSSGVLHKD--SLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225
Query: 526 LPGTIISTANSG 537
G +
Sbjct: 226 --GYWMVVECDQ 235
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 343 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 18/162 (11%)
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
+ + +DG +H L+ K +++ T T + +QI +
Sbjct: 50 VCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYPGNQITIL 109
Query: 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT-IISTANSGFNIFR 498
D + EI ++ H ++ I N G F+
Sbjct: 110 DSKTNK---------------VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154
Query: 499 TISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540
+ D ++ E H +++ + +
Sbjct: 155 SYEDDSQYIVHSAKSDVEYSSGVLHKD--SLLLALYSPDGIL 194
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 77.3 bits (189), Expect = 5e-15
Identities = 31/160 (19%), Positives = 49/160 (30%), Gaps = 14/160 (8%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQK-------PLVGHTNSVEDLQWSPGEKRVLASCS 339
+ + + I + R QK L V D++W+P ++A C
Sbjct: 110 CMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
D SI + T TLP T V + W+ + G +G + + +
Sbjct: 170 ADGSIAVLQVT--ETVKVCATLP--STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQE 225
Query: 400 KG---SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436
K H V V W T AD +
Sbjct: 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL 265
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 69.2 bits (168), Expect = 2e-12
Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 25/181 (13%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKR---VLASCSVDLSIRIWDTRVINTKS-------CMLTL 361
Q LV + L S + S I +D R + ++ L
Sbjct: 85 QGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKL 144
Query: 362 PNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420
V + WN T P ++ DG I V + V T VT+V W
Sbjct: 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE---TVKVCATLPSTVAVTSVCWS 201
Query: 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480
P + A G + + + ++ E K +P + + ++ W
Sbjct: 202 P-KGKQLAVGKQNGTVVQYLPTLQ----------EKKVIPCPPFYESDHPVRVLDVLWIG 250
Query: 481 Q 481
Sbjct: 251 T 251
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 44.9 bits (105), Expect = 8e-05
Identities = 28/211 (13%), Positives = 53/211 (25%), Gaps = 30/211 (14%)
Query: 564 ESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW--GEVGKVGIWDLKTA 621
GD+ + + + + I+ + T A + + +D++T
Sbjct: 69 IQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF 128
Query: 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 681
K P M W+ T P ++A +I
Sbjct: 129 SNE--------------AKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174
Query: 682 HIWTPREAGAWSVYLYTNRFGV-----------LATGDCKRNIHIWTPREAGAWQVDQKP 730
+ E L + V LA G + + P + P
Sbjct: 175 AVLQVTETVKVCATL-PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP 233
Query: 731 LVG--HTNSVEDLQWSPGEKRVLASCSVDRS 759
H V D+ W + + D +
Sbjct: 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGT 264
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A Length = 434 | Back alignment and structure |
|---|
Score = 42.2 bits (98), Expect = 5e-04
Identities = 28/221 (12%), Positives = 58/221 (26%), Gaps = 16/221 (7%)
Query: 159 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP 218
K P M W+ T P ++A +I + E
Sbjct: 132 AKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA---- 187
Query: 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAM 278
T + + WS L + ++ + IP PP F S H +
Sbjct: 188 TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPP-FYESDHPVRVLDV 246
Query: 279 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338
W T + + ++ + + + +R
Sbjct: 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTER--QHH 304
Query: 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
I WD + +A +++V++++ +
Sbjct: 305 YYLSYIEEWDLVLAA---------SAASTEVSILARQSDQI 336
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 69.7 bits (170), Expect = 9e-13
Identities = 19/138 (13%), Positives = 47/138 (34%), Gaps = 16/138 (11%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLS-IRIWDTRVINTKSCMLTLP-NAHTSDVNVI 372
+ HTN ++ ++ + +A+CS D + IR++ T + +DV +
Sbjct: 191 IKAHTNPIKMVRLNRKSDM-VATCSQDGTIIRVFKTE---DGVLVREFRRGLDRADVVDM 246
Query: 373 SWNRTEPLIVSGGDDGCIHVWDLR-----RFKKGSSVATFKHHTAPVTTVEWHPTES--- 424
W+ + D +HV+++ + K+ + + + +
Sbjct: 247 KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306
Query: 425 --STFASGGADDQIALWD 440
A + +W
Sbjct: 307 RGCKIAWISESSLVVVWP 324
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 34/222 (15%), Positives = 73/222 (32%), Gaps = 23/222 (10%)
Query: 314 PLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
P +N V D +++ ++ L + S I+ N + V
Sbjct: 14 PENHVSNPVTDYEFNQ-DQSCLILST-LKSFEIY-----NVHPVAHIMSQEMRHLSKVRM 66
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+RT + G +H+WD K V+ K PV + S F
Sbjct: 67 LHRTNYVAFVTGVKEVVHIWD---DVKKQDVSRIKVDA-PVKDLFL----SREFIVVSYG 118
Query: 434 DQIALWDLA-VERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492
D I+++ + + R + + + LL ++ + + ++H + S
Sbjct: 119 DVISVFKFGNPWKRITDDIRFGGVCEFSNGLL-VYSNEFNLGQIHITKL--QSSGSATTQ 175
Query: 493 GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534
+ + L+ H IK + + + +++T
Sbjct: 176 DQGVQQKAILGKGVLIKAH--TNPIKMVRLNRK--SDMVATC 213
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 4e-06
Identities = 8/89 (8%), Positives = 30/89 (33%), Gaps = 7/89 (7%)
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT 411
+ T++ ++ N ++ V +N+ + ++ ++++
Sbjct: 6 MITRNPIVPE-NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-----IMSQEM 58
Query: 412 APVTTVEWHPTESSTFASGGADDQIALWD 440
++ V + G + + +WD
Sbjct: 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 48.5 bits (115), Expect = 6e-06
Identities = 16/148 (10%), Positives = 44/148 (29%), Gaps = 19/148 (12%)
Query: 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATG-DCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321
H + + ++AT I ++ + + +
Sbjct: 186 GKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVLVRE----FRRGLDR 240
Query: 322 VE--DLQWSPGEKRVLASCSVDLSIRIWD--TRVINTKSCM--LTLPNAHTSDVNVISWN 375
+ D++WS + LA S ++ +++ N + + S+ ++ ++
Sbjct: 241 ADVVDMKWSTDGSK-LAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299
Query: 376 RTEP------LIVSGGDDGCIHVWDLRR 397
+ I + + VW R
Sbjct: 300 LSVDKHVRGCKIAWISESSLVVVWPHTR 327
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 1e-04
Identities = 76/511 (14%), Positives = 137/511 (26%), Gaps = 156/511 (30%)
Query: 130 LTSTEEDNERELED--DENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 187
L+ EE ++ +E+ N F L K + P + T L ++
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRL-------YNDN 123
Query: 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247
+ K N+ R +P L+ AL + +
Sbjct: 124 QVFA------KYNV----SRL--------QPY------------LKLRQALLELRPAKNV 153
Query: 248 AEHNKKRG-KGPG---IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303
G G G + S+ F + W L +C +
Sbjct: 154 LID----GVLGSGKTWVALDVCLSYKVQCKMDFKIFW-------LNLKNCNSPETVLEML 202
Query: 304 EAGAWQVDQ---------KPLVGHTNSVED----LQWSPGEKRVLASCSVDLSIR-IWDT 349
+ +Q+D + +S++ L S + L L + + +
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL------LVLLNVQNA 256
Query: 350 RVINT--KSC--MLTLPNAHTSDVNV---ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402
+ N SC +LT T V +S T + +
Sbjct: 257 KAWNAFNLSCKILLT-----TRFKQVTDFLSAATTTHISLDHHSMT---------LTPDE 302
Query: 403 SVATF------KHHTAPVTTVEWHPTESSTFASGGADDQIALWD--LAVERDSEIEQREA 454
+ + P + +P S A D +A WD V D E+
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES-IRDGLATWDNWKHVNCDKLTTIIES 361
Query: 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQ 514
L L E +++ ++F + +P+ LL
Sbjct: 362 SLNVLEP---------AEYRKMFDR--------------LSVFPPSAHIPTILL------ 392
Query: 515 KEIKELHWH---PQLPGTII------STANSGFNIFRTISMSNL---TSTEEDNEREL-- 560
L W ++ S TIS+ ++ + +NE L
Sbjct: 393 ----SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES-TISIPSIYLELKVKLENEYALHR 447
Query: 561 ---EDDESEGSGDEDRRKDPVMNSYFIRHRG 588
+ + D D P ++ YF H G
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 812 | |||
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.98 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.98 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.98 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.98 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.96 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.96 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.95 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.95 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.94 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.92 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.91 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.9 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.89 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.89 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.88 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.87 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.87 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.87 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.87 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.86 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.85 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.85 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.85 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.85 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.84 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.82 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.82 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.82 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.82 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.81 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.81 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.81 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.81 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.8 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.79 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.77 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.77 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.77 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.74 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.73 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.71 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.7 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.69 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.68 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.67 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.67 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.66 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.64 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.63 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.58 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.58 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.56 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.56 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.56 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.56 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.56 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.55 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.55 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.54 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.53 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.51 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.5 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.48 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.48 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.47 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.43 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.41 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.39 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.37 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.36 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.36 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.36 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.35 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.34 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.32 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.31 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.28 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.27 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.26 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.26 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.24 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.24 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.22 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.21 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.21 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.21 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.18 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.16 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.14 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.13 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.12 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.11 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.09 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.08 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.06 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.04 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.04 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.03 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.98 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.97 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.9 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.84 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.82 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.79 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.78 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.75 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.63 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.62 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.61 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.55 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 98.54 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.53 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 98.52 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 98.5 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.48 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 98.48 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.47 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.45 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.43 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.41 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.37 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.32 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 98.3 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.29 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 98.26 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.26 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.24 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.24 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.21 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.19 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.19 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.15 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.15 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.14 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.1 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.09 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.09 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.09 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.07 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.02 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.99 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.96 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.94 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.92 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 97.92 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.89 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.89 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 97.89 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.87 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.86 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.86 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.85 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.83 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.82 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 97.81 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.77 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.77 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 97.73 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.72 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 97.71 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.71 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.68 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.68 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.68 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 97.55 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 97.54 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.48 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.47 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.46 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.45 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 97.44 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.38 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 97.26 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.24 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.17 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.15 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.13 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.1 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.08 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.07 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.07 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.97 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.92 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 96.9 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 96.73 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.43 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.41 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.18 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.1 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.02 | |
| 2cn3_A | 737 | Xyloglucanase, beta-1,4-xyloglucan hydrolase; glyc | 95.95 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.71 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 95.58 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 95.41 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 95.18 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 94.94 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 94.92 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 94.86 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 94.77 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 94.71 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 94.41 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 94.39 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 94.34 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 94.27 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 93.78 | |
| 2cn3_A | 737 | Xyloglucanase, beta-1,4-xyloglucan hydrolase; glyc | 93.73 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 93.23 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 92.58 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 92.13 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 91.98 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 91.86 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 91.43 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 91.28 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 91.2 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 90.88 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 90.48 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 89.01 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 87.51 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 84.29 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 83.33 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 83.26 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 81.64 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 80.87 |
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-60 Score=538.75 Aligned_cols=525 Identities=14% Similarity=0.165 Sum_probs=391.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+.+.+.+++|+| +|++||+++ ++.|+||++.++. ....+.+|...|++++|+|+|++||+|+.|++|+|||+.
T Consensus 16 ~~~g~~~~~~~sp-dg~~l~~~~-~~~v~l~~~~~~~----~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 16 TARGTAVVLGNTP-AGDKIQYCN-GTSVYTVPVGSLT----DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 89 (611)
T ss_dssp CCTTCCCCCEECT-TSSEEEEEE-TTEEEEEETTCSS----CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred cccCceeEEeeCC-CCCEEEeCC-CCEEEEecCCCcc----cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECC
Confidence 3567788899999 999999998 5699999998766 667789999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
++ .......+.+|.+.|.+++|+|++ .+|++++.+ +.|++||. +. ....+.+|...|++++|+|
T Consensus 90 ~~-----~~~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd~--~~----~~~~l~gh~~~v~~v~f~p 157 (611)
T 1nr0_A 90 QT-----THILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDT--GT----SNGNLTGQARAMNSVDFKP 157 (611)
T ss_dssp ST-----TCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTT--CC----BCBCCCCCSSCEEEEEECS
T ss_pred CC-----cceeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEeeC--CC----CcceecCCCCCceEEEECC
Confidence 64 224456788999999999999999 688877764 47888874 33 3567889999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK- 408 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~- 408 (812)
+++..|++|+.|++|++||.+. ..+...+ .+|...|++++|+|++++|++|+.|+.|++||++ .++.+..+.
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~---~~~~~~l-~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~---~g~~~~~~~~ 230 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPP---FKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV---DGTKTGVFED 230 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTT---BEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---TCCEEEECBC
T ss_pred CCCeEEEEEeCCCeEEEEECCC---CeEeeee-ccccCceEEEEECCCCCEEEEEECCCcEEEEECC---CCcEeeeecc
Confidence 9986799999999999999873 4455566 7899999999999999999999999999999997 466677773
Q ss_pred ------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc-------------------------
Q psy4510 409 ------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK------------------------- 457 (812)
Q Consensus 409 ------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------------------- 457 (812)
+|.+.|.+++|+|++ .+|++++.|++|++||+.+.+............
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~ 309 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 309 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEE
T ss_pred ccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEE
Confidence 799999999999997 699999999999999998764321000000000
Q ss_pred c-CCCce-EEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 458 D-LPSQL-LFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 458 ~-~~~~~-~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+ ..... .....+...|.+++|+|++. .+++++.++ +.+|+..... ........+...|.+++|+++ +.+++.+
T Consensus 310 ~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~-~~~~~~~~h~~~v~~~~~s~~--~~l~s~s 385 (611)
T 1nr0_A 310 NPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGI-SNRVFPDVHATMITGIKTTSK--GDLFTVS 385 (611)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC-EEECSSCSCSSCEEEEEECTT--SCEEEEE
T ss_pred eCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCc-eeeecccCCcceEEEEEECCC--CcEEEEE
Confidence 0 00011 12223455899999999986 455555554 5666544332 222222345678999999987 5666666
Q ss_pred CCCceEEEEeecccCccccccccc----ccc------cccCCC------CCCccccCCCccceEEecccceEEEEEEecc
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNER----ELE------DDESEG------SGDEDRRKDPVMNSYFIRHRGCINRVRTCQY 598 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~----~~~------~~~~~~------~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 598 (812)
.++. +.+|++......... .+. ....++ ............ .....|...+.+++|+|+
T Consensus 386 ~d~~-----v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~-~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 386 WDDH-----LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK-LTEVPISYNSSCVALSND 459 (611)
T ss_dssp TTTE-----EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE-EEEEECSSCEEEEEECTT
T ss_pred cCCc-----eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc-eeeeecCCCceEEEEeCC
Confidence 5532 223332221110000 000 000000 000000000000 112246778999999999
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
|++|++| +.|++|++|++.+.... .+.. .+|...|++++|+| ++++|++++.|
T Consensus 460 g~~lasg--s~D~~v~lwd~~~~~~~-----------------------~~~~-~~h~~~v~~v~fsp-dg~~las~s~d 512 (611)
T 1nr0_A 460 KQFVAVG--GQDSKVHVYKLSGASVS-----------------------EVKT-IVHPAEITSVAFSN-NGAFLVATDQS 512 (611)
T ss_dssp SCEEEEE--ETTSEEEEEEEETTEEE-----------------------EEEE-EECSSCEEEEEECT-TSSEEEEEETT
T ss_pred CCEEEEe--CCCCeEEEEEccCCcee-----------------------eeec-cCCCCceEEEEECC-CCCEEEEEcCC
Confidence 9999999 89999999999875310 2233 68999999999999 89999999999
Q ss_pred ceEEEEecCC-Cc------------eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccc-ccccCC-CcceeEeEE
Q psy4510 679 RNIHIWTPRE-AG------------AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGH-TNSVEDLQW 743 (812)
Q Consensus 679 g~v~iWd~~~-~~------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~~~gH-~~~V~~l~f 743 (812)
++|++|++.+ ++ .+..++|+|||++||+|+.|++|++|++.++.. .. ..+.+| ...|++++|
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~---~~~~~~~~h~~~~v~~v~f 589 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD---HPIIIKGAHAMSSVNSVIW 589 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS---CCEEETTSSTTSCEEEEEE
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc---ccchhhccCcccCeeEEEE
Confidence 9999999975 21 244567999999999999999999999988763 23 567899 899999999
Q ss_pred ecCCceeEEeeccCCceEEeeec
Q psy4510 744 SPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 744 s~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
+|+++ |+|+|.|++|++|++.
T Consensus 590 s~d~~--l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 590 LNETT--IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EETTE--EEEEETTSCEEEEECC
T ss_pred cCCCE--EEEecCCCCEEEEecc
Confidence 99996 9999999999999973
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-59 Score=534.53 Aligned_cols=508 Identities=18% Similarity=0.321 Sum_probs=407.4
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
...+.||.+.|+|++||| +|++||||+.|+.|+|||. +++ ....+.+|...|++++|+|++++|++++.|+.|+
T Consensus 9 ~~~L~GH~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~----~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~ 82 (577)
T 2ymu_A 9 RNRLEAHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 82 (577)
T ss_dssp EEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSC----EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEECCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCC----EEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 344679999999999999 9999999999999999995 333 5678899999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce-------------------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ------------------- 309 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~------------------- 309 (812)
+||... +++..+.+|.+.|.+++|+|++ .+|++++.|+.+++|+........
T Consensus 83 vWd~~~--------~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 153 (577)
T 2ymu_A 83 LWNRNG--------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT 153 (577)
T ss_dssp EEETTS--------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred EEECCC--------CEEEEEECCCCCEEEEEECCCC-CEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCcc
Confidence 999653 7788999999999999999999 899999999999999965431100
Q ss_pred -----------------eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 310 -----------------VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 310 -----------------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
........|...|.+++|+|++. +|++++.||.|++||.. ...+..+ ..|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~w~~~----~~~~~~~-~~~~~~v~~~ 227 (577)
T 2ymu_A 154 IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRN----GQLLQTL-TGHSSSVRGV 227 (577)
T ss_dssp EEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT----SCEEEEE-ECCSSCEEEE
T ss_pred ceecccccceeccccceeeeeeccCCCcceeeeeecCCCC-EEEEEcCCCEEEEEeCC----CcEEEEE-ecCCCCEEEE
Confidence 00122345778899999999998 59999999999999964 3344555 7899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++++.|+.|++||. .++.+..+.+|...|++++|+|++ ..|++++.|+.|++||....
T Consensus 228 ~~s~dg~~l~~~~~d~~i~~w~~----~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~~-------- 294 (577)
T 2ymu_A 228 AFSPDGQTIASASDDKTVKLWNR----NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNGQ-------- 294 (577)
T ss_dssp EECTTSSCEEEEETTSCEEEECT----TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC--------
T ss_pred EECCCCCEEEEEeCCCEEEEEeC----CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCc--------
Confidence 99999999999999999999997 467888999999999999999987 69999999999999997543
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
.+.....+...|.+++|+|++. .+++++.++ +.+|+ .... .......+...+.+++|+|+ +..+
T Consensus 295 ---------~~~~~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~-~~~~--~~~~~~~~~~~v~~~~~s~~--g~~l 359 (577)
T 2ymu_A 295 ---------LLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWN-RNGQ--HLQTLTGHSSSVWGVAFSPD--GQTI 359 (577)
T ss_dssp ---------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEE-TTSC--EEEEECCCSSCEEEEEECTT--SSEE
T ss_pred ---------EEEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEe-CCCC--eeEEEeCCCCCEEEEEECCC--CCEE
Confidence 3333444556899999999985 455555555 56665 3332 23334456679999999999 4444
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
+++..+. .+.+|+. .......+.+|...|.+++|+|++++|+++ +.|+
T Consensus 360 ~~~~~dg----~v~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~--~~d~ 407 (577)
T 2ymu_A 360 ASASDDK----TVKLWNR--------------------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASA--SDDK 407 (577)
T ss_dssp EEEETTS----EEEEEET--------------------------TCCEEEEEECCSSCEEEEEECTTSSCEEEE--ETTS
T ss_pred EEEeCCC----EEEEEcC--------------------------CCCEEEEecCCCCCeEEEEECCCCCEEEEE--eCCC
Confidence 4443321 1222221 112345678899999999999999999998 8999
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC--
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-- 689 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~-- 689 (812)
.|++|+.... ++..+.+|...|++++|+| ++++|++++.|++|++|++...
T Consensus 408 ~v~~~~~~~~--------------------------~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 408 TVKLWNRNGQ--------------------------LLQTLTGHSSSVWGVAFSP-DDQTIASASDDKTVKLWNRNGQLL 460 (577)
T ss_dssp EEEEECTTCC--------------------------EEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCEE
T ss_pred EEEEEeCCCC--------------------------EEEEecCCCCCeEEEEECC-CCCEEEEEcCCCEEEEEECCCCEE
Confidence 9999996432 5778899999999999999 7889999999999999998652
Q ss_pred -------ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEE
Q psy4510 690 -------GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762 (812)
Q Consensus 690 -------~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~i 762 (812)
..+..++|+|++++||+++.|++|++|+. +++ ++..+.+|...|++|+|||+|+ +||+++.||+|+|
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~----~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~l 534 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKL 534 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSC----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCC----EEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEE
Confidence 23445678999999999999999999995 444 5678999999999999999999 8999999999999
Q ss_pred eeecCcceEEEE--eeeeeEEEeeecchhh
Q psy4510 763 GARRDMLYCFFV--SLVHCIFVWLKYQLFV 790 (812)
Q Consensus 763 Wd~~~~~~~~~~--~~~~~~~~w~~~~~~~ 790 (812)
||........+. ....+.+.|.+...+|
T Consensus 535 wd~~~~~~~~~~~h~~~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 535 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTI 564 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EeCCCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 996433322222 2333667787766544
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-57 Score=519.53 Aligned_cols=486 Identities=18% Similarity=0.346 Sum_probs=395.0
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
.+..+.||.+.|++++|+| ++++||+++.|++|+|||+.. + ....+.+|...|.+++|+|++++|++++.|+.+
T Consensus 49 ~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd~~~-~----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 49 LLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp EEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTS-C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCC-C----EEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 3455679999999999999 999999999999999999643 3 567789999999999999999999999999999
Q ss_pred EEeeCCCCCCC---------------------------------CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 248 AEHNKKRGKGP---------------------------------GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 248 ~vwd~~~~~~~---------------------------------~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
++|+....... ............|...|.++.|+|++ .+|++|+.|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 201 (577)
T 2ymu_A 123 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDD 201 (577)
T ss_dssp EEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTS-SCEEEEETT
T ss_pred eecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCC-CEEEEEcCC
Confidence 99996542100 00112233455678889999999998 789999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|++|+... . ....+.+|...|.+++|+|+++ +|++++.|+.|++||.. ...+..+ .+|...|++++|
T Consensus 202 ~~v~~w~~~~-~----~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~i~~w~~~----~~~~~~~-~~~~~~v~~v~~ 270 (577)
T 2ymu_A 202 KTVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN----GQLLQTL-TGHSSSVNGVAF 270 (577)
T ss_dssp SEEEEECTTS-C----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTT----SCEEEEE-CCCSSCEEEEEE
T ss_pred CEEEEEeCCC-c----EEEEEecCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeCC----CCEEEEE-ecCCCCEEEEEE
Confidence 9999999643 3 4567788999999999999998 59999999999999964 3345555 789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+|++++|++++.|+.|++||. .++.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+...
T Consensus 271 ~~d~~~l~~~~~d~~i~~w~~----~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~---------- 335 (577)
T 2ymu_A 271 RPDGQTIASASDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ---------- 335 (577)
T ss_dssp CTTSSEEEEEETTSCEEEEET----TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC----------
T ss_pred cCCCCEEEEEeCCCEEEEEeC----CCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCC----------
Confidence 999999999999999999997 457788899999999999999987 69999999999999998755
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
.+.....+...+.+++|+|++. .+++++.++ +.+|. .+.. .......+...|.+++|+|++. .+++
T Consensus 336 -------~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~-~~~~--~~~~~~~~~~~v~~~~~s~dg~--~l~~ 402 (577)
T 2ymu_A 336 -------HLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWN-RNGQ--LLQTLTGHSSSVRGVAFSPDGQ--TIAS 402 (577)
T ss_dssp -------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEE-TTCC--EEEEEECCSSCEEEEEECTTSS--CEEE
T ss_pred -------eeEEEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEc-CCCC--EEEEecCCCCCeEEEEECCCCC--EEEE
Confidence 3444445566899999999985 555555555 45554 4332 2233345667999999999954 3333
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
+..+ ..+.+|+. .......+.+|...|.+++|+|++++++++ +.|+.|
T Consensus 403 ~~~d----~~v~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~--~~d~~v 450 (577)
T 2ymu_A 403 ASDD----KTVKLWNR--------------------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASA--SDDKTV 450 (577)
T ss_dssp EETT----SEEEEECT--------------------------TCCEEEEEECCSSCEEEEEECTTSSEEEEE--ETTSEE
T ss_pred EeCC----CEEEEEeC--------------------------CCCEEEEecCCCCCeEEEEECCCCCEEEEE--cCCCEE
Confidence 3222 12222321 112345678899999999999999999998 899999
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC----
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA---- 689 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~---- 689 (812)
++|++... ++..+.+|...|++++|+| ++++||+++.|++|++|+....
T Consensus 451 ~~w~~~~~--------------------------~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 451 KLWNRNGQ--------------------------LLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQT 503 (577)
T ss_dssp EEEETTSC--------------------------EEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSCEEEE
T ss_pred EEEECCCC--------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcCCCCEEEE
Confidence 99997543 5678899999999999999 8899999999999999997541
Q ss_pred -----ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 690 -----GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 690 -----~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
..+..++|+|+|++||+|+.||.|++||. +++ ++.++.+|.+.|++|+|+|||+ +|+|+|.|++|++||
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~----~~~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCC----EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 22445678999999999999999999996 444 5678999999999999999999 899999999999997
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-54 Score=488.45 Aligned_cols=455 Identities=16% Similarity=0.231 Sum_probs=343.2
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---- 244 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---- 244 (812)
+..+.||.+.|++++||| +|++||+|+.||+|+|||+.++... ....+.+|..+|.+++|+|++++|++++.+
T Consensus 52 ~~~~~~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~--~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHI--LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp CEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCC--EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred CeEecCCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCCCcce--eeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 445569999999999999 9999999999999999999765421 345678999999999999999999998865
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.|++|+. + .+...+.+|...|.+++|+|+++.+|++|+.|++|++||..... ....+.+|...|++
T Consensus 129 ~~v~~wd~--~-------~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~----~~~~l~~H~~~V~~ 195 (611)
T 1nr0_A 129 GHVFLFDT--G-------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK----FKSTFGEHTKFVHS 195 (611)
T ss_dssp EEEEETTT--C-------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE----EEEEECCCSSCEEE
T ss_pred eEEEEeeC--C-------CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe----EeeeeccccCceEE
Confidence 47888874 2 45567899999999999999985679999999999999987765 46678899999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
++|+|+++ +|++|+.|++|++||++++. ++..+.. +|...|.+++|+|++++|++|+.|++|++||++..
T Consensus 196 v~fspdg~-~las~s~D~~i~lwd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 196 VRYNPDGS-LFASTGGDGTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEECCCCC-EEEEEECCCcEEEEECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99999998 69999999999999998543 3333322 79999999999999999999999999999999742
Q ss_pred CC----------------------------------------CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 399 KK----------------------------------------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 399 ~~----------------------------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+. +.....+.+|...|++++|+|++ .+|++++.|++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEE
Confidence 10 11234556899999999999987 69999999999999
Q ss_pred EEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe-EEEEeCCCCCcc-----------
Q psy4510 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQ----------- 506 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~----------- 506 (812)
||+.+.... ..+...+...|.+++|++++ .+++++.++. .+|.........
T Consensus 351 Wd~~~~~~~---------------~~~~~~h~~~v~~~~~s~~~--~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 413 (611)
T 1nr0_A 351 WDISTGISN---------------RVFPDVHATMITGIKTTSKG--DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ 413 (611)
T ss_dssp EETTTCCEE---------------ECSSCSCSSCEEEEEECTTS--CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSC
T ss_pred EECCCCcee---------------eecccCCcceEEEEEECCCC--cEEEEEcCCceEEeecCCccccccceeeeecCCC
Confidence 999876321 01112234568888888763 4555555543 444322111000
Q ss_pred -----------c----------------EEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 507 -----------L----------------LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 507 -----------~----------------~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
. .....+...+.+++|+|+ +.++++++.+. .+.+|++....
T Consensus 414 ~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd--g~~lasgs~D~----~v~lwd~~~~~------ 481 (611)
T 1nr0_A 414 PLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND--KQFVAVGGQDS----KVHVYKLSGAS------ 481 (611)
T ss_dssp EEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT--SCEEEEEETTS----EEEEEEEETTE------
T ss_pred CcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC--CCEEEEeCCCC----eEEEEEccCCc------
Confidence 0 001112345677778887 44444443321 22222211100
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
.......+|...|++++|+|+|++|+++ +.|++|++|++.+...
T Consensus 482 ------------------~~~~~~~~h~~~v~~v~fspdg~~las~--s~d~~v~~w~~~~~~~---------------- 525 (611)
T 1nr0_A 482 ------------------VSEVKTIVHPAEITSVAFSNNGAFLVAT--DQSRKVIPYSVANNFE---------------- 525 (611)
T ss_dssp ------------------EEEEEEEECSSCEEEEEECTTSSEEEEE--ETTSCEEEEEGGGTTE----------------
T ss_pred ------------------eeeeeccCCCCceEEEEECCCCCEEEEE--cCCCCEEEEEcCCCCc----------------
Confidence 0011226799999999999999999998 8999999999987321
Q ss_pred CCCCCCCCCee--eecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc-------------eeEEEEecCCCCEE
Q psy4510 640 KGPGIPTPPLF--SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-------------AWSVYLYTNRFGVL 704 (812)
Q Consensus 640 ~~~~~~~~~~~--~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~-------------~~~~~~~s~dg~~l 704 (812)
++. .+.+|...|++++|+| ++++||||+.|++|+||++.++. .+..++|+|+++ |
T Consensus 526 --------~~~~~~~~~H~~~V~~v~fsp-dg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l 595 (611)
T 1nr0_A 526 --------LAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-I 595 (611)
T ss_dssp --------ESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-E
T ss_pred --------eeeeeeeeecccceeEEEECC-CCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-E
Confidence 111 2345999999999999 88999999999999999997632 234557899998 9
Q ss_pred EeecCCCeEEEeecC
Q psy4510 705 ATGDCKRNIHIWTPR 719 (812)
Q Consensus 705 asgs~dg~i~iwd~~ 719 (812)
++|+.|++|++|++.
T Consensus 596 ~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 596 VSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEecCCCCEEEEecc
Confidence 999999999999973
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-54 Score=533.22 Aligned_cols=522 Identities=16% Similarity=0.251 Sum_probs=414.7
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw 250 (812)
.+.+|.+.|++++|+| ++++||+|+.||+|+|||+.++. ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 610 ~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp EECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCC----EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 4558999999999999 99999999999999999999887 667788999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|+.++ +++..+.+|...|.+++|+|++ ..++++|+.||.|++||+.++. ....+.+|.+.|++++|+|
T Consensus 685 d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~----~~~~~~~h~~~v~~~~~sp 753 (1249)
T 3sfz_A 685 DSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE----CRNTMFGHTNSVNHCRFSP 753 (1249)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS----EEEEECCCSSCEEEEEECS
T ss_pred ECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc----hhheecCCCCCEEEEEEec
Confidence 99985 7889999999999999999963 2579999999999999999887 5677889999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCccc---------------------------------------------------ce
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKS---------------------------------------------------CM 358 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------------------------------------~~ 358 (812)
+++ +|++++.||.|++||+++..... .+
T Consensus 754 ~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 754 DDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp STT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred CCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 998 69999999999999987532110 11
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
..+..+|...|.+++|+|+++++++|+.+|.|++||+. .+..+..+.+|...|++++|+|++ .+|++++.|+.|++
T Consensus 833 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID---SRLKVADCRGHLSWVHGVMFSPDG-SSFLTASDDQTIRV 908 (1249)
T ss_dssp EEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred eEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC---CCceeeecCCCccceEEEEECCCC-CEEEEEeCCCeEEE
Confidence 11223788899999999999999999999999999998 577888999999999999999987 68999999999999
Q ss_pred EEcCCCCchhHHHhhhh-----------------------hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 439 WDLAVERDSEIEQREAE-----------------------LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
|++.............. ........ .......+.+++|+|++..+++++.++.+.
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~ 986 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI--DYLPEAQVSCCCLSPHLEYVAFGDEDGAIK 986 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE--EEECCSCEEEEEECTTSSEEEEEETTSCCE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE--EEcccCcEEEEEEcCCCCEEEEEcCCCCEE
Confidence 99764211000000000 00000011 111234689999999987666666666677
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc-----------------------Cccc
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN-----------------------LTST 552 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~-----------------------l~~~ 552 (812)
+|....... ......+...|.+++|+|++..++.++.++...++ .+.. +..+
T Consensus 987 i~d~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw---d~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ 1061 (1249)
T 3sfz_A 987 IIELPNNRV--FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW---NWQTGDYVFLQAHQETVKDFRLLQDSRLLSW 1061 (1249)
T ss_dssp EEETTTTSC--EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE---ETTTTEEECCBCCSSCEEEEEECSSSEEEEE
T ss_pred EEEcCCCce--eeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE---ECCCCceEEEecCCCcEEEEEEcCCCcEEEE
Confidence 777655432 22334566799999999995433333322222222 1111 1112
Q ss_pred ccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccc
Q psy4510 553 EEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
..++.+.+|+.. .......+.+|.+.|.+++|+|++++++++ +.||.|++|++.++.
T Consensus 1062 ~~dg~v~vwd~~-----------~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~--s~d~~v~iwd~~~~~---------- 1118 (1249)
T 3sfz_A 1062 SFDGTVKVWNVI-----------TGRIERDFTCHQGTVLSCAISSDATKFSST--SADKTAKIWSFDLLS---------- 1118 (1249)
T ss_dssp ESSSEEEEEETT-----------TTCCCEEEECCSSCCCCEEECSSSSSCEEE--CCSSCCCEECSSSSS----------
T ss_pred ECCCcEEEEECC-----------CCceeEEEcccCCcEEEEEECCCCCEEEEE--cCCCcEEEEECCCcc----------
Confidence 223334444332 234556788899999999999999999998 899999999998876
Q ss_pred ccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce-------------------eE
Q psy4510 633 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------------------WS 693 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~-------------------~~ 693 (812)
++..+.+|.+.|++++|+| ++.+|++++.||+|++||+.+++. +.
T Consensus 1119 ---------------~~~~l~~h~~~v~~~~~s~-dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 1182 (1249)
T 3sfz_A 1119 ---------------PLHELKGHNGCVRCSAFSL-DGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVT 1182 (1249)
T ss_dssp ---------------CSBCCCCCSSCEEEEEECS-SSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCC
T ss_pred ---------------eeeeeccCCCcEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEE
Confidence 6677889999999999999 889999999999999999987543 33
Q ss_pred EEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 694 ~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.++|+|||++|++++ |.|++||+.+++ .+..+.+|...|++++|+|||+ +|++++.||.|++|++-
T Consensus 1183 ~l~fs~dg~~l~s~~--g~v~vwd~~~g~----~~~~~~~~~~~i~~~~~s~dg~-~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1183 DVCFSPDSKTLVSAG--GYLKWWNVATGD----SSQTFYTNGTNLKKIHVSPDFR-TYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp EEEECTTSSCEEEES--SSEEEBCSSSCB----CCCCCCCSSCCCCCCEECSSSC-CEEEECTTCCEEEECCC
T ss_pred EEEECCCCCEEEECC--CeEEEEECCCCc----eeeeeeccCCcccEEEECCCCC-EEEEecCCcEEEEEeec
Confidence 467899999999986 899999999987 4678899999999999999999 89999999999999974
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-52 Score=477.30 Aligned_cols=515 Identities=14% Similarity=0.118 Sum_probs=386.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC-eeeeeEcC--CCCcEEEeeCCCceEEe
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS-AEDLQWSD--LKTALQTVDDPFQLAEH 250 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~s~--~~~~l~s~~~d~~i~vw 250 (812)
.|.+.|.+++|+| ++++||+++ ++.|+||++.++.........+.+|... |++++|+| ++++|++++.|+.|++|
T Consensus 16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6889999999999 999999998 7899999999772222267788999999 99999999 99999999999999999
Q ss_pred eCCCCCC-CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 251 NKKRGKG-PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 251 d~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
++.++.. .......+..+.+|...|.+++|+|++ .+|++++.+ +.|++|| .+. ....+.+|...|.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d--~~~----~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWD--SGN----SLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETT--TCC----EEEECCSCSSCEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEE--CCC----cceeeecCCccEEEE
Confidence 9964200 000025667888999999999999999 788888887 6888888 333 456778999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC---CeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS---DVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
+|+|+++.+|++++.||.|++||++. ...+..+ ..|.. .|.+++|+|+ +++|++|+.||.|++||++ .+
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~ 239 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SG 239 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTT---BEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCC---cceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC---CC
Confidence 99999987799999999999999884 4455555 67888 9999999999 9999999999999999998 56
Q ss_pred CceEEc-c---cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC-----Cc
Q psy4510 402 SSVATF-K---HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-----KE 472 (812)
Q Consensus 402 ~~~~~~-~---~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 472 (812)
+.+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||+...+ ........ ..
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~-----------------~~~~~~~~~~~~~~~ 300 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSK-----------------CVQKWTLDKQQLGNQ 300 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTE-----------------EEEEEECCTTCGGGC
T ss_pred CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCc-----------------EEEEEcCCCCcccCc
Confidence 778888 6 899999999999 65 799999999999999998763 22222222 46
Q ss_pred eeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc-eEE----------
Q psy4510 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIF---------- 541 (812)
Q Consensus 473 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~-~~~---------- 541 (812)
+..+.|. ++..+++++.++.+.+|+.... ........+...|.+++| |+ +++++.++. .++
T Consensus 301 ~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 301 QVGVVAT-GNGRIISLSLDGTLNFYELGHD--EVLKTISGHNKGITALTV-NP----LISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp EEEEEEE-ETTEEEEEETTSCEEEEETTEE--EEEEEECCCSSCEEEEET-TT----TEEEETTSCEEETTTTEEECCCC
T ss_pred eeEEEeC-CCCeEEEEECCCCEEEEECCCC--cEEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEEchhhcCccc
Confidence 7788886 4444444444445566654332 122233345567777777 65 222222211 110
Q ss_pred ---EEee---cccCcccccccccccccccCCCC--------------------CCcc---ccCCCccceEEecccceEEE
Q psy4510 542 ---RTIS---MSNLTSTEEDNERELEDDESEGS--------------------GDED---RRKDPVMNSYFIRHRGCINR 592 (812)
Q Consensus 542 ---~~~~---~~~l~~~~~~~~~~~~~~~~~~~--------------------~~~~---~~~~~~~~~~~~~h~~~v~~ 592 (812)
..+. ...+..+..++.+.+|+...... .... ........ ....|...+.+
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 451 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII-KSVRLNSPGSA 451 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEE-EEEECSSCEEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCcee-eecccCCCceE
Confidence 0000 01122222333334443221100 0000 00011111 22247788999
Q ss_pred EEEeccCCeEEEEeecC-cceEEEEeccccccccCCcccccccccccCCCCCCCCCCe-eeecCCCCceEEEEeCCCCCC
Q psy4510 593 VRTCQYGSTTLAGVWGE-VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPG 670 (812)
Q Consensus 593 l~~s~~g~~l~~~~~~~-dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gh~~~V~~l~~sp~~~~ 670 (812)
++|+ +++++++ +. ||.|++|++.++. .. ..+.+|...|++++|+| +++
T Consensus 452 ~~~~--~~~l~~~--~~~d~~i~~~~~~~~~-------------------------~~~~~~~~~~~~v~~~~~s~-~g~ 501 (615)
T 1pgu_A 452 VSLS--QNYVAVG--LEEGNTIQVFKLSDLE-------------------------VSFDLKTPLRAKPSYISISP-SET 501 (615)
T ss_dssp EEEC--SSEEEEE--ETTTSCEEEEETTEEE-------------------------EEEECSSCCSSCEEEEEECT-TSS
T ss_pred EEEc--CCEEEEe--ecCCCeEEEEECCCcc-------------------------ccccccCCccCceEEEEECC-CCC
Confidence 9999 8888888 77 9999999998875 22 56788999999999999 889
Q ss_pred eEEecCCCceEEEEecCCCc-----------eeEEEEecC----------CCCEEEeecCCCeEEEeecCCCCCcccccc
Q psy4510 671 VLATGDCKRNIHIWTPREAG-----------AWSVYLYTN----------RFGVLATGDCKRNIHIWTPREAGAWQVDQK 729 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~-----------~~~~~~~s~----------dg~~lasgs~dg~i~iwd~~~~~~~~~~~~ 729 (812)
+|++++.||.|++|++.+++ .+..++|+| ++++||+|+.||.|++|++.++.. ++.
T Consensus 502 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~ 578 (615)
T 1pgu_A 502 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK---IIK 578 (615)
T ss_dssp EEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC---CEE
T ss_pred EEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCce---ech
Confidence 99999999999999998733 345667899 999999999999999999998743 577
Q ss_pred cccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 730 PLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 730 ~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
.+.+|.+.|++|+|+|+++ |++++.||+|++|++..
T Consensus 579 ~~~~h~~~v~~l~~s~~~~--l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 579 ALNAHKDGVNNLLWETPST--LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ETTSSTTCEEEEEEEETTE--EEEEETTSCEEEEEEC-
T ss_pred hhhcCccceEEEEEcCCCC--eEEecCCceEEEEeeec
Confidence 8999999999999999997 99999999999999874
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-53 Score=497.94 Aligned_cols=515 Identities=10% Similarity=0.059 Sum_probs=363.6
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....++ ||.+.|++++|+| ++++||+|+.||+|+||+..+.+ .. ....|..+|.+++|+| +++|++++.|+.
T Consensus 9 ~~~~~~-gh~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~----~~-~~~~~~~~V~~l~fsp-g~~L~S~s~D~~ 80 (902)
T 2oaj_A 9 AETNKY-GMSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVE----VV-IKLEDRSAIKEMRFVK-GIYLVVINAKDT 80 (902)
T ss_dssp EEEEEE-ECSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCE----EE-EECSSCCCEEEEEEET-TTEEEEEETTCE
T ss_pred cccccc-CCCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcE----EE-EEcCCCCCEEEEEEcC-CCEEEEEECcCe
Confidence 345556 9999999999999 99999999999999999987653 22 2235788999999999 889999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-------ccccCCC
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-------KPLVGHT 319 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~~~~~h~ 319 (812)
|++||+.++ +++.++. |.+.|.+++|+|++ .+|++|+.||+|++||+.++....... ..+.+|.
T Consensus 81 v~lWd~~~~-------~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 81 VYVLSLYSQ-------KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEEETTTC-------SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEEECCCC-------cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 999999885 6666775 67899999999999 899999999999999998765210000 3457899
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-----------------CcCCCCeEEEEEcCCCCEEE
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-----------------NAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~~v~~l~~~~~~~~l~ 382 (812)
+.|++++|+|++..+|++|+.||.| +||++.. .++..+. ..|...|++++|+|+|++|+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 9999999999865579999999999 9999853 3333331 23457899999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEE--c---cc-------------CCCCEEEEEEcc----CCCcEEEEEECC-----CC
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVAT--F---KH-------------HTAPVTTVEWHP----TESSTFASGGAD-----DQ 435 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~--~---~~-------------h~~~v~~v~~~p----~~~~~l~s~~~d-----g~ 435 (812)
+|+.||.|++||+++ ++++.. + .. |..+|++++|++ ++..+|++|+.+ ..
T Consensus 228 sgs~Dg~i~lWd~~~---g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 228 TIHEDNSLVFWDANS---GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEETTCCEEEEETTT---CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEECCCeEEEEECCC---CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999984 455442 2 11 355799999964 434678888776 37
Q ss_pred EEEEEcCCCCchhH---HHhhhhhccCCCceEEeecCCCceeEEEEcCC---------CCCEEEEEeC-CCeEEEEeCCC
Q psy4510 436 IALWDLAVERDSEI---EQREAELKDLPSQLLFIHLGQKEIKELHWHPQ---------LPGTIISTAN-SGFNIFRTISD 502 (812)
Q Consensus 436 v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---------~~~~~~~~~~-~~~~~~~~~~~ 502 (812)
+.+|++........ ...................+...|.++.+.++ .+..+++.+. +.+.+|.....
T Consensus 305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g 384 (902)
T 2oaj_A 305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG 384 (902)
T ss_dssp EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence 99998632100000 00000000000011111123457888888662 2334455555 44667664322
Q ss_pred CCccc-----EEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 503 LPSQL-----LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 503 ~~~~~-----~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
..... .....+...|+++++++.. ...|...... . .
T Consensus 385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~-----------------~~~w~~~~~~--------------~--------~ 425 (902)
T 2oaj_A 385 IFTDKASLFPQNLSWLRPLATTSMAASVP-----------------NKLWLGALSA--------------A--------Q 425 (902)
T ss_dssp CEECCGGGSCGGGTTBTTBEEEEEEEEEE-----------------HHHHHHHHHT--------------T--------B
T ss_pred CcccccccCCCcccccCCCeeEEEEEEcC-----------------HHHHHHHHhc--------------c--------c
Confidence 11100 0011223456666654421 0111100000 0 0
Q ss_pred ccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee-ee----
Q psy4510 578 VMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF-SF---- 652 (812)
Q Consensus 578 ~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 652 (812)
.....+.+|...+.+++|+|+++.|++| +.|++|++||+.++... .+ ..+. .+
T Consensus 426 ~~~~~l~G~~~~v~sv~~spdg~~laSg--s~DgtVrlWd~~~g~~~--~~------------------~~~~~~l~~~~ 483 (902)
T 2oaj_A 426 NKDYLLKGGVRTKRQKLPAEYGTAFITG--HSNGSVRIYDASHGDIQ--DN------------------ASFEVNLSRTL 483 (902)
T ss_dssp CCCCSCCCSBCCCCCCCCCSEEEEEEEE--ETTSEEEEEESSCCTTT--TT------------------BCEEEEHHHHT
T ss_pred CCCCcccCCcCCCCcccccccCcEEEEe--cCCCcEEEEECCCcccc--CC------------------ceEEeechhhc
Confidence 0112456788888899999999999999 89999999999887411 00 0010 11
Q ss_pred -cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc-----------------------------------------
Q psy4510 653 -SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG----------------------------------------- 690 (812)
Q Consensus 653 -~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~----------------------------------------- 690 (812)
.+|...|++|+|+| ++++||+|+.||+|+||++.+++
T Consensus 484 ~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (902)
T 2oaj_A 484 NKAKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVR 562 (902)
T ss_dssp TCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCS
T ss_pred CCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCC
Confidence 28999999999999 89999999999999999987542
Q ss_pred --------------eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccc-cccccc-CCCcceeEeEEe-----cCC--
Q psy4510 691 --------------AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQV-DQKPLV-GHTNSVEDLQWS-----PGE-- 747 (812)
Q Consensus 691 --------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~-~~~~~~-gH~~~V~~l~fs-----~dg-- 747 (812)
.+..++||||| +||+|+.|++|+|||+++...... ..+.+. +|.+.|++|+|| |||
T Consensus 563 ~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 563 QGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSE
T ss_pred CccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCc
Confidence 12345699999 999999999999999876542100 113565 999999999999 886
Q ss_pred -ceeEEeeccCCceEEeee---cCcc
Q psy4510 748 -KRVLASCSVDRSNRIGAR---RDML 769 (812)
Q Consensus 748 -~~~L~s~s~Dg~i~iWd~---~~~~ 769 (812)
+ +|++++.|++|++||+ .+++
T Consensus 642 ~~-~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 642 SI-LMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp EE-EEEEEETTSEEEEEEEEECGGGC
T ss_pred ce-EEEEEecCCcEEEEEEecCCCCc
Confidence 6 8999999999999999 5555
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-49 Score=465.78 Aligned_cols=480 Identities=15% Similarity=0.200 Sum_probs=382.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
......+.+|.+.|.+++|+| ++++||+|+.||.|+|||+.++. ....+.+|..+|++++|+|++++|++++.++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCc----eEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 344556679999999999999 99999999999999999998876 5677889999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++|++.++ +.+..+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++.. ....+.+|...|.++
T Consensus 78 ~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~---~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 78 RIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSE---EEEEEECCSSCEEEE
T ss_pred eEEEEECCCC-------cEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCce---EEEEEcCCCCcEEEE
Confidence 9999999885 7788899999999999999999 7999999999999999987632 456678899999999
Q ss_pred EEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 326 QWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 326 ~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+|+| ++. +|++++.||.|++||++.. .....+...+...+.+++|+| ++++|++|+.||.|++||++ .+.
T Consensus 147 ~~~p~~~~-~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~ 219 (814)
T 3mkq_A 147 AFNPKDPS-TFASGCLDRTVKVWSLGQS---TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKS 219 (814)
T ss_dssp EEETTEEE-EEEEEETTSEEEEEETTCS---SCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT---TTE
T ss_pred EEEcCCCC-EEEEEeCCCeEEEEECCCC---cceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC---CCc
Confidence 9999 555 7999999999999999853 334444355668999999999 88999999999999999998 467
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
.+..+.+|...|++++|+|++ .+|++++.||.|++||+.+.+ .......+...+.+++|+|++
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~----------------~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK----------------VEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS----------------EEEEECCSSSSEEEEEECTTC
T ss_pred EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc----------------EEEEeecCCCcEEEEEEccCC
Confidence 788899999999999999997 599999999999999998763 233334445689999999998
Q ss_pred CCE-EEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCce--EEEEeec---ccCccccccc
Q psy4510 483 PGT-IISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN--IFRTISM---SNLTSTEEDN 556 (812)
Q Consensus 483 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~--~~~~~~~---~~l~~~~~~~ 556 (812)
..+ ++++..+++.+|+.... ...+.++|+ +.+++.+..... .+..... +.+....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 343 (814)
T 3mkq_A 283 RKNYIASGFDNGFTVLSLGND--------------EPTLSLDPV--GKLVWSGGKNAAASDIFTAVIRGNEEVEQDE--- 343 (814)
T ss_dssp GGGEEEEEETTEEEEEECSCC--------------SCCEEECSS--SEEEEECCTTSCTTCEEEEECCSCCCCCSSS---
T ss_pred CceEEEEEeCCCEEEEEcCCC--------------CceeEECCC--CCEEEECcccccceeeeeeecccccccccCc---
Confidence 664 67777777777764332 234567777 556655433211 1111111 1100000
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccc
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNK 636 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 636 (812)
...........+...+.+++|+|+|++++++ + +|.+.+|++....
T Consensus 344 ------------------~~~~~~~~~~~~~~~~~~~~~spdg~~la~~--~-~~~~~i~~~~~~~-------------- 388 (814)
T 3mkq_A 344 ------------------PLSLQTKELGSVDVFPQSLAHSPNGRFVTVV--G-DGEYVIYTALAWR-------------- 388 (814)
T ss_dssp ------------------CBCCCCEEECCCSSCCSEEEECTTSSEEEEE--E-TTEEEEEETTTTE--------------
T ss_pred ------------------cceeeeecCCCCccCCceeEECCCCCEEEEe--c-CCEEEEEECcccc--------------
Confidence 0111233455667788999999999999987 5 8999999976442
Q ss_pred ccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc--eeEEEEecCCC---CEEEeecCCC
Q psy4510 637 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--AWSVYLYTNRF---GVLATGDCKR 711 (812)
Q Consensus 637 ~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~--~~~~~~~s~dg---~~lasgs~dg 711 (812)
..+.+.+.+++|+| ++++||+++.+|.|++|+...+. .+....++|+| ++|++++.++
T Consensus 389 ----------------~~~~~~i~~~~~sp-dg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~ 451 (814)
T 3mkq_A 389 ----------------NKAFGKCQDFVWGP-DSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDG 451 (814)
T ss_dssp ----------------EEEEEECSEEEECT-TSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETT
T ss_pred ----------------ccCCCceEEEEEeC-CCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCC
Confidence 12345788999999 88899999999999999875543 33445689998 6899999999
Q ss_pred eEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEee------ccCCceEEee
Q psy4510 712 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC------SVDRSNRIGA 764 (812)
Q Consensus 712 ~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~------s~Dg~i~iWd 764 (812)
.|++||+.+++ ++..+.+|.. .++|||||+ +|+++ +.++.+.+|-
T Consensus 452 ~v~~~d~~~~~----~~~~~~~~~~---~v~~s~dg~-~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 452 FVYFFDWDNGT----LVRRIDVNAK---DVIWSDNGE-LVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp EEEEECTTTCC----EEEEESSCEE---EEEECTTSS-EEEEEECCCSSCSCSEEEEEE
T ss_pred EEEEEECCcCc----EEEEEecCCC---EEEEcCCCC-EEEEEEcCcccCCceEEEEEe
Confidence 99999999887 4667777765 899999999 79999 6666666664
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-48 Score=482.43 Aligned_cols=477 Identities=15% Similarity=0.214 Sum_probs=374.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|.+.|++++|+|++++|++|+.|+.|++|++.++ .++.++.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d 678 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG-------EKLLDIKAHEDEVLCCAFSSDD-SYIATCSAD 678 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CEEEEeccCCCCEEEEEEecCC-CEEEEEeCC
Confidence 44567899999999999999999999999999999999885 7888999999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|+|++||+.++. ....+.+|...|.+++|+|++ ..++++|+.||.|++||+++ ..++..+ .+|...|++++
T Consensus 679 ~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~ 750 (1249)
T 3sfz_A 679 KKVKIWDSATGK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ---KECRNTM-FGHTNSVNHCR 750 (1249)
T ss_dssp SEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS---SSEEEEE-CCCSSCEEEEE
T ss_pred CeEEEEECCCCc----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC---cchhhee-cCCCCCEEEEE
Confidence 999999999887 567788999999999999953 33799999999999999984 4455666 78999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCC---------------------------------------------------CC
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKK---------------------------------------------------GS 402 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~---------------------------------------------------~~ 402 (812)
|+|++++|++|+.||.|++||++.... +.
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 999999999999999999999874210 00
Q ss_pred ceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 403 SVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 403 ~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.+..+ .+|...|.+++|+|++ .++++++.|+.|++||+.... .......+...|.+++|+|+
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~~~----------------~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRL----------------KVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTTTE----------------EEEEECCCSSCEEEEEECTT
T ss_pred ceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCc----------------eeeecCCCccceEEEEECCC
Confidence 11111 2678899999999987 699999999999999998763 23333445568999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----------------------------cccE------EeecCCCCeeEEEEcCCC
Q psy4510 482 LPGTIISTANSGFNIFRTISDLP-----------------------------SQLL------FIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~------~~~~~~~~i~~~~~~p~~ 526 (812)
+..++.++.++.+.+|....... .... ........+.+++++|++
T Consensus 894 g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 973 (1249)
T 3sfz_A 894 GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL 973 (1249)
T ss_dssp SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC
Confidence 86555444455567775321100 0000 011123578899999995
Q ss_pred CCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEe
Q psy4510 527 PGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 527 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
...+++..++... ++++.. ......+.+|...|.+++|+|+|++++++
T Consensus 974 ~~l~~g~~~g~i~------i~d~~~-------------------------~~~~~~~~~h~~~v~~l~~s~dg~~l~s~- 1021 (1249)
T 3sfz_A 974 EYVAFGDEDGAIK------IIELPN-------------------------NRVFSSGVGHKKAVRHIQFTADGKTLISS- 1021 (1249)
T ss_dssp SEEEEEETTSCCE------EEETTT-------------------------TSCEEECCCCSSCCCCEEECSSSSCEEEE-
T ss_pred CEEEEEcCCCCEE------EEEcCC-------------------------CceeeecccCCCceEEEEECCCCCEEEEE-
Confidence 4333333222221 122111 12244567899999999999999999998
Q ss_pred ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 607 WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 607 ~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
+.||.|++|++.++. ...+.+|...|.+++|+| ++ .+++++.|++|++||+
T Consensus 1022 -~~dg~i~vwd~~~~~--------------------------~~~~~~~~~~v~~~~~~~-~~-~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A 1022 -SEDSVIQVWNWQTGD--------------------------YVFLQAHQETVKDFRLLQ-DS-RLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp -CSSSBEEEEETTTTE--------------------------EECCBCCSSCEEEEEECS-SS-EEEEEESSSEEEEEET
T ss_pred -cCCCEEEEEECCCCc--------------------------eEEEecCCCcEEEEEEcC-CC-cEEEEECCCcEEEEEC
Confidence 899999999999875 223568999999999999 55 7889999999999999
Q ss_pred CCCcee----------EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeecc
Q psy4510 687 REAGAW----------SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756 (812)
Q Consensus 687 ~~~~~~----------~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~ 756 (812)
.+++.. ..++++|++++|++|+.||+|++|++.+++ ....+.+|.+.|++++|||+|+ +||+++.
T Consensus 1073 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~----~~~~l~~h~~~v~~~~~s~dg~-~lat~~~ 1147 (1249)
T 3sfz_A 1073 ITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS----PLHELKGHNGCVRCSAFSLDGI-LLATGDD 1147 (1249)
T ss_dssp TTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS----CSBCCCCCSSCEEEEEECSSSS-EEEEEET
T ss_pred CCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc----eeeeeccCCCcEEEEEECCCCC-EEEEEeC
Confidence 886543 334689999999999999999999999887 4678999999999999999999 8999999
Q ss_pred CCceEEeeecCcceE-EE-----------EeeeeeEEEeeecchhh
Q psy4510 757 DRSNRIGARRDMLYC-FF-----------VSLVHCIFVWLKYQLFV 790 (812)
Q Consensus 757 Dg~i~iWd~~~~~~~-~~-----------~~~~~~~~~w~~~~~~~ 790 (812)
||+|++||+.++... .+ .....+.+.|++...+|
T Consensus 1148 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l 1193 (1249)
T 3sfz_A 1148 NGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTL 1193 (1249)
T ss_dssp TSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCE
T ss_pred CCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEE
Confidence 999999999887621 11 12223667777766554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=427.67 Aligned_cols=457 Identities=17% Similarity=0.190 Sum_probs=353.5
Q ss_pred CccCcCCCCCc-eEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCc----ccccccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 168 PLFSFSGHLTE-GFAMDWSST-EPGVLATGDCKRNIHIWTPREAGA----WQVDQKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 168 ~i~~~~gh~~~-i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
.+..+.+|.+. |++++|+|. ++++||+|+.||.|+|||+.++.. .......+..|..+|.+++|+|++++|+++
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 44556689999 999999995 789999999999999999975410 112556778899999999999999999999
Q ss_pred eCC----CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 242 DDP----FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 242 ~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
+.+ +.|++|+ .+ +++..+.+|...|.+++|+|+++.+|++|+.|+.|++||+.+.. ....+.+
T Consensus 135 ~~~~~~~~~v~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~----~~~~~~~ 201 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK----FSASDRT 201 (615)
T ss_dssp ECCSSCSEEEEETT--TC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE----EEEEECS
T ss_pred ccCCCCccEEEEEE--CC-------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc----eeeeecc
Confidence 987 6899998 32 67788999999999999999985589999999999999998776 5667788
Q ss_pred CCC---CEEEEEEcCC-CCeEEEEEECCCeEEEEECCCCCcccceeecCC---cCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 318 HTN---SVEDLQWSPG-EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN---AHTSDVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 318 h~~---~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
|.. .|.+++|+|+ ++ +|++++.||.|++||+++ ...+..+.. .|...|.+++|+ ++++|++++.||.|
T Consensus 202 ~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 202 HHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS---GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATI 276 (615)
T ss_dssp SSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT---CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEE
T ss_pred cCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC---CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcE
Confidence 998 9999999999 77 699999999999999984 344555534 899999999999 99999999999999
Q ss_pred EEEecCCCCCCCceEEcccC----CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 391 HVWDLRRFKKGSSVATFKHH----TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
++||++ .++.+..+..+ ...+.++.|. ++ .++++++.|+.|++||+.... .+...
T Consensus 277 ~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~----------------~~~~~ 335 (615)
T 1pgu_A 277 RVWDVT---TSKCVQKWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDE----------------VLKTI 335 (615)
T ss_dssp EEEETT---TTEEEEEEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEE----------------EEEEE
T ss_pred EEEECC---CCcEEEEEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCc----------------EEEEE
Confidence 999998 46677777766 4678899886 44 699999999999999998752 23333
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeec
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~ 546 (812)
..+...|.+++| |+ +++++.++....+... .+. ..+...|.+++|.+. ..+++++.++. +.+
T Consensus 336 ~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~-----~~~-~~~~~~v~~~~~~~~--~~l~~~~~d~~-----i~~ 397 (615)
T 1pgu_A 336 SGHNKGITALTV-NP----LISGSYDGRIMEWSSS-----SMH-QDHSNLIVSLDNSKA--QEYSSISWDDT-----LKV 397 (615)
T ss_dssp CCCSSCEEEEET-TT----TEEEETTSCEEETTTT-----EEE-CCCCSCEEEEECCST--TCCEEEETTTE-----EEE
T ss_pred eCCCCCEEEEEe-cC----cEEECCCCeEEEEEch-----hhc-CcccCceEEEEECCC--cEEEEEeCCCC-----EEE
Confidence 345568999999 76 5555555544333333 122 455667888888333 34444443321 111
Q ss_pred ccCc-----------------------------------------------------------cccc-ccccccccccCC
Q psy4510 547 SNLT-----------------------------------------------------------STEE-DNERELEDDESE 566 (812)
Q Consensus 547 ~~l~-----------------------------------------------------------~~~~-~~~~~~~~~~~~ 566 (812)
|++. .+.. ++.+.+|+..
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~-- 475 (615)
T 1pgu_A 398 NGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS-- 475 (615)
T ss_dssp TTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETT--
T ss_pred EEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECC--
Confidence 1111 1111 2333333222
Q ss_pred CCCCccccCCCccc-eEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCC
Q psy4510 567 GSGDEDRRKDPVMN-SYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIP 645 (812)
Q Consensus 567 ~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (812)
..... ..+..|...|.+++|+|++++|+++ +.||.|++|++.++.
T Consensus 476 ---------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~dg~i~iw~~~~~~----------------------- 521 (615)
T 1pgu_A 476 ---------DLEVSFDLKTPLRAKPSYISISPSETYIAAG--DVMGKILLYDLQSRE----------------------- 521 (615)
T ss_dssp ---------EEEEEEECSSCCSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTTE-----------------------
T ss_pred ---------CccccccccCCccCceEEEEECCCCCEEEEc--CCCCeEEEeeCCCCc-----------------------
Confidence 01111 4456788999999999999999998 899999999999876
Q ss_pred CCCeeeecC-CCCceEEEEeCCC---------CCCeEEecCCCceEEEEecCCC-c----------eeEEEEecCCCCEE
Q psy4510 646 TPPLFSFSG-HLTEGFAMDWSST---------EPGVLATGDCKRNIHIWTPREA-G----------AWSVYLYTNRFGVL 704 (812)
Q Consensus 646 ~~~~~~~~g-h~~~V~~l~~sp~---------~~~~las~s~Dg~v~iWd~~~~-~----------~~~~~~~s~dg~~l 704 (812)
++..+.+ |...|++++|+|. ++.+||+++.||+|++|++.++ + .+..++|+|+++ |
T Consensus 522 --~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 522 --VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp --EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred --ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence 5667777 9999999999993 4779999999999999999885 2 234567899999 9
Q ss_pred EeecCCCeEEEeecCC
Q psy4510 705 ATGDCKRNIHIWTPRE 720 (812)
Q Consensus 705 asgs~dg~i~iwd~~~ 720 (812)
++++.||+|++|++.+
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 9999999999999864
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=434.92 Aligned_cols=540 Identities=10% Similarity=0.050 Sum_probs=359.3
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|...|.+++|+| +++||+++.|++|+|||+.+++ ....+. |...|++++|+|++++|++|+.||.|++||+.
T Consensus 56 ~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~----~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 56 EDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQK----VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp SSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCS----EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCc----EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 5778999999999 5699999999999999999876 334443 77899999999999999999999999999998
Q ss_pred CCCCCCCCCCCc-----------eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc------
Q psy4510 254 RGKGPGIPTPPL-----------FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV------ 316 (812)
Q Consensus 254 ~~~~~~~~~~~~-----------~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~------ 316 (812)
++ ... ..+.+|.+.|.+++|+|++...|++|+.||.| +||++++.. ...+.
T Consensus 129 ~~-------~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g 196 (902)
T 2oaj_A 129 RD-------QLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPF 196 (902)
T ss_dssp TT-------EEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTT
T ss_pred CC-------ccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce----EEEEecccCCc
Confidence 75 211 23478999999999999765789999999999 999988752 23333
Q ss_pred ------------CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--ecC--C-------------cCCC
Q psy4510 317 ------------GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML--TLP--N-------------AHTS 367 (812)
Q Consensus 317 ------------~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~--~-------------~~~~ 367 (812)
+|...|++++|+|++. +|++|+.||+|++||++++. ++. .+. . .|..
T Consensus 197 ~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~---~~~~r~l~~~~~~~~~~~~~~~~~~~~~ 272 (902)
T 2oaj_A 197 APGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGH---MIMARTVFETEINVPQPDYIRDSSTNAA 272 (902)
T ss_dssp CCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCC---EEEEECSSCSCTTSCCTTCCCCCSSCCC
T ss_pred CCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCc---EEEEEeecccccCCCCCcCCCCCccccC
Confidence 3467899999999998 69999999999999998543 222 110 1 2355
Q ss_pred CeEEEEEc----CCC-CEEEEEeCC-----CcEEEEecCCC---------------CCCCceEEcc-cCCCCEEEEEEcc
Q psy4510 368 DVNVISWN----RTE-PLIVSGGDD-----GCIHVWDLRRF---------------KKGSSVATFK-HHTAPVTTVEWHP 421 (812)
Q Consensus 368 ~v~~l~~~----~~~-~~l~sg~~d-----g~i~iwd~~~~---------------~~~~~~~~~~-~h~~~v~~v~~~p 421 (812)
.|++++|+ |++ .+|++|+.+ +.+++|++... ........+. .|...|..+.+.|
T Consensus 273 ~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 352 (902)
T 2oaj_A 273 KISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIP 352 (902)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECC
T ss_pred CeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECC
Confidence 79999995 444 478888765 37999985310 0112233333 4678899999866
Q ss_pred C---------CCcEEEEEECCCCEEEEEcCCCCchhHH-HhhhhhccCCCceE---E---------------------ee
Q psy4510 422 T---------ESSTFASGGADDQIALWDLAVERDSEIE-QREAELKDLPSQLL---F---------------------IH 467 (812)
Q Consensus 422 ~---------~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~---~---------------------~~ 467 (812)
+ ++..+++++.|+.|++||+..+...... .....+....+.+. + ..
T Consensus 353 ~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~ 432 (902)
T 2oaj_A 353 RQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK 432 (902)
T ss_dssp SSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC
T ss_pred CCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc
Confidence 2 3347888999999999999654211000 00000000000000 0 11
Q ss_pred cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcc---cEEe-------ecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 468 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQ---LLFI-------HLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 468 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
.+...+..++|+|++. ++++++.|+...+|........ .+.. ..+...|.+++|+|++ .+++++..+
T Consensus 433 G~~~~v~sv~~spdg~-~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg--~~LAsgs~D 509 (902)
T 2oaj_A 433 GGVRTKRQKLPAEYGT-AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET--LELAVSIET 509 (902)
T ss_dssp CSBCCCCCCCCCSEEE-EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT--TEEEEEETT
T ss_pred CCcCCCCcccccccCc-EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC--CeEEEEecC
Confidence 2223566778888764 6677777775544444433321 1111 1455789999999995 444444332
Q ss_pred --ceEEEEeecccCcc----ccccccccccc--ccCCCCC--------CccccCCCccceEEecccceEEEEEEeccCCe
Q psy4510 538 --FNIFRTISMSNLTS----TEEDNERELED--DESEGSG--------DEDRRKDPVMNSYFIRHRGCINRVRTCQYGST 601 (812)
Q Consensus 538 --~~~~~~~~~~~l~~----~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~ 601 (812)
..+|..-....... ........... ....... .........+...+.+|.+.|++++|||+| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 22222211100000 00000000000 0000000 000000012345677899999999999999 9
Q ss_pred EEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec-CCCCceEEEEeC-----CCC--CCeEE
Q psy4510 602 TLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWS-----STE--PGVLA 673 (812)
Q Consensus 602 l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~V~~l~~s-----p~~--~~~la 673 (812)
|++| +.|++|+|||+.+...... ..+..+. +|.+.|++|+|+ |++ +.+|+
T Consensus 589 lAsg--s~D~tv~lwd~~~~~~~~~--------------------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~ 646 (902)
T 2oaj_A 589 VGIA--YAAGSLMLIDRRGPAIIYM--------------------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMV 646 (902)
T ss_dssp EEEE--ETTSEEEEEETTTTEEEEE--------------------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEE
T ss_pred EEEE--eCCCcEEEEECCCCeEEEE--------------------eehhHhccccccceEEEEEEEEecCCCCCcceEEE
Confidence 9998 8999999999877541000 0012343 899999999999 832 48999
Q ss_pred ecCCCceEEEEec---CCCc----------------eeEEEEec----------------------CCCCEEEeecCCCe
Q psy4510 674 TGDCKRNIHIWTP---REAG----------------AWSVYLYT----------------------NRFGVLATGDCKRN 712 (812)
Q Consensus 674 s~s~Dg~v~iWd~---~~~~----------------~~~~~~~s----------------------~dg~~lasgs~dg~ 712 (812)
+|+.|++|++||+ .+|+ ++.+..|+ +++.+||++ +..
T Consensus 647 sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ 724 (902)
T 2oaj_A 647 CGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDD 724 (902)
T ss_dssp EEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSE
T ss_pred EEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccc
Confidence 9999999999999 4433 33444344 566677776 778
Q ss_pred EEEeecCCCCCcccccccccCCCcceeEe---E------EecCCceeEEeeccCCceEEeeecCcc
Q psy4510 713 IHIWTPREAGAWQVDQKPLVGHTNSVEDL---Q------WSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 713 i~iwd~~~~~~~~~~~~~~~gH~~~V~~l---~------fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
||||++.++++ .+...+|...+.++ . |+++|. .|++++.||+|++|++.+.+
T Consensus 725 ir~~~~~~~k~----~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~~g~i~~~s~p~l~ 785 (902)
T 2oaj_A 725 IRLITLGKSKS----THKGFKYPLAATGLSYISTVEKNNDRKNLT-VIITLEINGHLRVFTIPDFK 785 (902)
T ss_dssp EEEECTTCCCE----EEEECSSCEEEEEEEEEEEECSSSCEEEEE-EEEEEETTSEEEEEETTTCC
T ss_pred eEEEeCccccc----eeeEcccceeeeEEEEEEeccccccccCce-EEEEEeCCCcEEEEECcchH
Confidence 99999999874 44556676667776 6 789998 89999999999999998887
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=411.10 Aligned_cols=365 Identities=18% Similarity=0.299 Sum_probs=280.6
Q ss_pred CCCCCeeeeChhHHhhhhccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCc
Q psy4510 60 LDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNER 139 (812)
Q Consensus 60 ~~~~~~~~~d~~~y~~~~~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~ 139 (812)
|+++.++. |+|+|.+.++||||++||+|+..+..++.|| ++++++||++.+ +.|+|+++++. ++....+.+
T Consensus 28 wk~n~~~~-----y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~-~~~~~~GT~t~~-~~n~i~i~~~~-lp~~~~~~~- 98 (430)
T 2xyi_A 28 WKKNTPFL-----YDLVMTHALEWPSLTAQWLPDVTKQDGKDYS-VHRLILGTHTSD-EQNHLLIASVQ-LPSEDAQFD- 98 (430)
T ss_dssp HHHHHHHH-----EEEEEEEECSSCCSCEEECSCCEECTTCSCE-EEEEEEECCCSS-SCEEEEEEEEE-EC--------
T ss_pred HhhCChHH-----HHHHhhcCCCCCceEEEECcccccccCCCcc-eEEEEEEEcCCC-CCCEEEEEEEE-CCCCccccc-
Confidence 56666654 5599999999999999999999888888898 589999999998 88999999987 433221111
Q ss_pred ccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc------cc
Q psy4510 140 ELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------WQ 213 (812)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~------~~ 213 (812)
. .+.|++++ +...+....+++. ..... +|.+.|++++|+|+++.+||+|+.+|.|+||++.+... ..
T Consensus 99 -~--~~~d~~~~-~~~~~~~~~~~~~--~~~~~-~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~ 171 (430)
T 2xyi_A 99 -G--SHYDNEKG-EFGGFGSVCGKIE--IEIKI-NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGEC 171 (430)
T ss_dssp -----------------------CEE--EEEEE-EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCC
T ss_pred -c--cccccccc-ccccccCCCCceE--EEEEE-cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccC
Confidence 1 11111111 1100111233332 23334 78899999999994488999999999999999986210 01
Q ss_pred ccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 214 VDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 214 ~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
.....+.+|...|.+++|+|+++ +|++++.||.|++|++..+........+...+.+|...|.+++|+|.+..+|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 25667789999999999999998 99999999999999998742111111235678899999999999996668999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.||.|++||+++.... .....+..|...|++++|+|+++++|++|+.||.|++||++.. ..++..+ ..|...|.++
T Consensus 252 ~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~--~~~~~~~-~~h~~~v~~i 327 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTS-KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL--KLKLHSF-ESHKDEIFQV 327 (430)
T ss_dssp TTSEEEEEETTCSCSS-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT--TSCSEEE-ECCSSCEEEE
T ss_pred CCCeEEEEECCCCCCC-cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC--CCCeEEe-ecCCCCEEEE
Confidence 9999999999976311 1345567899999999999999888999999999999999953 2344555 6799999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCC-----------CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKK-----------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
+|+|+++ +|++|+.||.|+|||++.... ...+..+.+|...|++++|+|+++.+|++++.||.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9999996 899999999999999985221 2567788899999999999999866999999999999999
Q ss_pred cCCC
Q psy4510 441 LAVE 444 (812)
Q Consensus 441 ~~~~ 444 (812)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 9754
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=409.58 Aligned_cols=459 Identities=13% Similarity=0.117 Sum_probs=349.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..+.+.+|...|++++|+|++++|++++.+|.|++|++.++ ..+..+.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d 76 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDD 76 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETT
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-------ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCC
Confidence 45678899999999999999999999999999999999875 7788899999999999999998 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
|.|++|++.++. ....+.+|.+.|++++|+|+++ .|++++.||.|++||++.. ......+ ..|...|.+++|
T Consensus 77 g~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~--~~~~~~~-~~~~~~v~~~~~ 148 (814)
T 3mkq_A 77 FRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENN--WALEQTF-EGHEHFVMCVAF 148 (814)
T ss_dssp SEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGT--SEEEEEE-ECCSSCEEEEEE
T ss_pred CeEEEEECCCCc----EEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCC--ceEEEEE-cCCCCcEEEEEE
Confidence 999999999887 5667788999999999999999 5999999999999999843 1233334 689999999999
Q ss_pred cC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-CCCEEEEEEcc--CCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 375 NR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHP--TESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 375 ~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+| ++++|++|+.||.|++||++. ......+..+ ...|..++|+| ++ .+|++++.||.|++||+....
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~----- 219 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQ---STPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKS----- 219 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTC---SSCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTE-----
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC---CcceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCc-----
Confidence 99 788999999999999999974 4455555544 48999999999 65 699999999999999998763
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
.+.....+...|..++|+|+++ .+++++. +.+.+|+..... .......+...+.+++|+|++...
T Consensus 220 -----------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 220 -----------CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp -----------EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS--EEEEECCSSSSEEEEEECTTCGGG
T ss_pred -----------EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--EEEEeecCCCcEEEEEEccCCCce
Confidence 2223334456899999999986 4555554 456666654432 222334455789999999996655
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
+++++.++... .+... .....+.++|+|+.++++ +.
T Consensus 286 ~~~~~~~~~~~--~~~~~----------------------------------------~~~~~~~~~~~g~~~~~~--~~ 321 (814)
T 3mkq_A 286 YIASGFDNGFT--VLSLG----------------------------------------NDEPTLSLDPVGKLVWSG--GK 321 (814)
T ss_dssp EEEEEETTEEE--EEECS----------------------------------------CCSCCEEECSSSEEEEEC--CT
T ss_pred EEEEEeCCCEE--EEEcC----------------------------------------CCCceeEECCCCCEEEEC--cc
Confidence 55555443211 11111 112346778888877776 33
Q ss_pred cce---EEE------EeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCce
Q psy4510 610 VGK---VGI------WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680 (812)
Q Consensus 610 dg~---I~i------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~ 680 (812)
+.. +.. |++..+. ........+..|...+.+++|+| ++++|++++ |+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~-~~~ 378 (814)
T 3mkq_A 322 NAAASDIFTAVIRGNEEVEQDE---------------------PLSLQTKELGSVDVFPQSLAHSP-NGRFVTVVG-DGE 378 (814)
T ss_dssp TSCTTCEEEEECCSCCCCCSSS---------------------CBCCCCEEECCCSSCCSEEEECT-TSSEEEEEE-TTE
T ss_pred cccceeeeeeecccccccccCc---------------------cceeeeecCCCCccCCceeEECC-CCCEEEEec-CCE
Confidence 332 111 1111111 01113445667778899999999 888999988 899
Q ss_pred EEEEecCCCce-----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCC---ceeEE
Q psy4510 681 IHIWTPREAGA-----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE---KRVLA 752 (812)
Q Consensus 681 v~iWd~~~~~~-----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg---~~~L~ 752 (812)
+.+|++..... +..++|+|+|+++|+++.+|.|++|+ .+.+|...|.+++|+|+| + +|+
T Consensus 379 ~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~------------~~~~~~~~v~~~~~s~dg~~~~-~l~ 445 (814)
T 3mkq_A 379 YVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK------------NFKEVTSWSVPMHSAIDRLFSG-ALL 445 (814)
T ss_dssp EEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEE------------TTEECTTCCCCCSSCCCEEECS-SSE
T ss_pred EEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEE------------CCCCccceEEcCCcCccceecc-eEE
Confidence 99999876322 23467899999999999999999995 356788889999999998 6 699
Q ss_pred eeccCCceEEeeecCcceEEEEeeeeeEEEeeecchhhhh
Q psy4510 753 SCSVDRSNRIGARRDMLYCFFVSLVHCIFVWLKYQLFVDV 792 (812)
Q Consensus 753 s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 792 (812)
+++.|++|++||+.++............+.|+....+|-+
T Consensus 446 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~dg~~la~ 485 (814)
T 3mkq_A 446 GVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMI 485 (814)
T ss_dssp EEEETTEEEEECTTTCCEEEEESSCEEEEEECTTSSEEEE
T ss_pred EEecCCEEEEEECCcCcEEEEEecCCCEEEEcCCCCEEEE
Confidence 9999999999999988743333222237778776655443
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=367.06 Aligned_cols=290 Identities=18% Similarity=0.359 Sum_probs=257.2
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|..+|++++|+|++++|++|+.|+.|++||+.++ ....++.+|.+.|.+++|+|++ .+|++|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-------~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~ 172 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHSG-KLLASCSADM 172 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 4567899999999999999999999999999999999985 7788999999999999999998 7999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|++||+.+.. ....+.+|...|.+++|+|++. +|++|+.|++|++||+++ ..++..+ .+|...|.++.|+
T Consensus 173 ~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 173 TIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT---GYCVKTF-TGHREWVRMVRPN 243 (410)
T ss_dssp CCCEEETTSSC----EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEC
T ss_pred eEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC---CcEEEEE-eCCCccEEEEEEC
Confidence 99999998876 5677889999999999999998 699999999999999984 4556666 7899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC-------------------CcEEEEEECCCCE
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE-------------------SSTFASGGADDQI 436 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-------------------~~~l~s~~~dg~v 436 (812)
|++.+|++|+.||.|++||++ .......+..|...|.+++|+|++ +.+|++|+.|+.|
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred CCCCEEEEEcCCCeEEEEECC---CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 999999999999999999998 467788899999999999999963 2478888888889
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKE 516 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (812)
++||+.+...
T Consensus 321 ~iwd~~~~~~---------------------------------------------------------------------- 330 (410)
T 1vyh_C 321 KMWDVSTGMC---------------------------------------------------------------------- 330 (410)
T ss_dssp EEEETTTTEE----------------------------------------------------------------------
T ss_pred EEEECCCCce----------------------------------------------------------------------
Confidence 9998865410
Q ss_pred eeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe
Q psy4510 517 IKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC 596 (812)
Q Consensus 517 i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 596 (812)
...+.+|...|.+++|+
T Consensus 331 ---------------------------------------------------------------~~~~~~h~~~v~~v~~~ 347 (410)
T 1vyh_C 331 ---------------------------------------------------------------LMTLVGHDNWVRGVLFH 347 (410)
T ss_dssp ---------------------------------------------------------------EEEEECCSSCEEEEEEC
T ss_pred ---------------------------------------------------------------EEEEECCCCcEEEEEEc
Confidence 11233456688899999
Q ss_pred ccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecC
Q psy4510 597 QYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 676 (812)
Q Consensus 597 ~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s 676 (812)
|++++|+++ +.||.|++||+.++. ++..+.+|...|++++|+| ++.+|+||+
T Consensus 348 ~~g~~l~s~--s~D~~i~vwd~~~~~-------------------------~~~~~~~h~~~v~~l~~~~-~~~~l~sgs 399 (410)
T 1vyh_C 348 SGGKFILSC--ADDKTLRVWDYKNKR-------------------------CMKTLNAHEHFVTSLDFHK-TAPYVVTGS 399 (410)
T ss_dssp SSSSCEEEE--ETTTEEEEECCTTSC-------------------------CCEEEECCSSCEEEEEECS-SSSCEEEEE
T ss_pred CCCCEEEEE--eCCCeEEEEECCCCc-------------------------eEEEEcCCCCcEEEEEEcC-CCCEEEEEe
Confidence 999999998 899999999998775 6788999999999999999 788999999
Q ss_pred CCceEEEEec
Q psy4510 677 CKRNIHIWTP 686 (812)
Q Consensus 677 ~Dg~v~iWd~ 686 (812)
.||+|++|++
T Consensus 400 ~D~~i~vW~~ 409 (410)
T 1vyh_C 400 VDQTVKVWEC 409 (410)
T ss_dssp TTSEEEEEC-
T ss_pred CCCcEEEEeC
Confidence 9999999986
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=352.74 Aligned_cols=296 Identities=18% Similarity=0.296 Sum_probs=255.7
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
......+.+|.+.|++++|+| ++.+||+|+.||+|+|||+.++. ....+..|..+|.+++|+|++++|++++.|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCc----eeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 345566779999999999999 99999999999999999998876 5677889999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++||+.++ +++..+.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++.. ....+.+|...|.++
T Consensus 78 ~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 78 RIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCV 146 (304)
T ss_dssp EEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEE
T ss_pred EEEEEECCCC-------cEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEE
Confidence 9999999985 7788999999999999999998 7999999999999999987642 345678999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+|+|.+..+|++|+.||+|++||++... ....+...|...+..++|+| ++++|++|+.||.|++||++ .++.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~---~~~~ 220 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQST---PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSC 220 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSS---CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT---TTEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCC---ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC---CCcc
Confidence 9999654479999999999999998533 33444456778899999987 56799999999999999998 5778
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
+..+.+|...|.+++|+|++ .+|++|+.||+|++||+.+.+ .......+...+.+++|+|++.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK----------------VEKTLNVGLERSWCIATHPTGR 283 (304)
T ss_dssp EEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC----------------EEEEECCSSSSEEEEEECTTCG
T ss_pred ceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc----------------eeeeccCCCccEEEEEECCCCC
Confidence 99999999999999999997 599999999999999998873 2223334456899999999876
Q ss_pred C-EEEEEeCCCeEEEEeC
Q psy4510 484 G-TIISTANSGFNIFRTI 500 (812)
Q Consensus 484 ~-~~~~~~~~~~~~~~~~ 500 (812)
. +++++..++..+|...
T Consensus 284 ~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 284 KNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp GGCEEEEETTEEEEEECC
T ss_pred ceEEEEecCCceEEEEec
Confidence 5 4788888888877654
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=366.59 Aligned_cols=250 Identities=21% Similarity=0.384 Sum_probs=228.7
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
...+.||.++|++++|+| ++.+||+|+.||+|+|||+.+++ ....+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~----~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGD----FERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCC----CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred eEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCc----EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 445669999999999999 99999999999999999999887 6678899999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||+.++ .++.++.+|...|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|.+++|+
T Consensus 176 iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 176 LWDFQGF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp EEETTSS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEEC
T ss_pred EEeCCCC-------ceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEeCCCccEEEEEEC
Confidence 9999874 7788899999999999999998 899999999999999999887 567788999999999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--------------------CCEEEEEeCCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--------------------EPLIVSGGDDG 388 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~sg~~dg 388 (812)
|++. +|++|+.||+|++||+++ ..+...+ ..|...|.+++|+|+ +.+|++|+.||
T Consensus 244 ~~g~-~l~s~s~D~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 244 QDGT-LIASCSNDQTVRVWVVAT---KECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp TTSS-EEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred CCCC-EEEEEcCCCeEEEEECCC---CceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9998 799999999999999984 4455555 789999999999996 66999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++ .+..+..+.+|...|++++|+|++ .+|++|+.|+.|++||+...
T Consensus 319 ~i~iwd~~---~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 319 TIKMWDVS---TGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EEEEEETT---TTEEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTS
T ss_pred eEEEEECC---CCceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC
Confidence 99999998 577889999999999999999987 68999999999999998655
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=358.28 Aligned_cols=325 Identities=16% Similarity=0.180 Sum_probs=229.8
Q ss_pred eEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCC
Q psy4510 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPR 303 (812)
Q Consensus 230 ~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~ 303 (812)
.+.+++.++ .++.+.....|++... ....|...|.+++|+|+| .+|++|+. |+.|++|+..
T Consensus 12 d~g~~~~~~-~~~g~~~~~~w~~p~~-----------~p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~ 78 (357)
T 4g56_B 12 DLGTENLYF-QSNGSSKGSAWGRPVT-----------APACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDP 78 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSC
T ss_pred CCCccceEE-ecCCCccccccCCCCC-----------CcccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECC
Confidence 333444443 3344566778876542 234799999999999999 89999997 7889999988
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
++...........+|...|.+++|+|++. +++++.||+|+|||+.++...........+|...|++++|+|++++|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 156 (357)
T 4g56_B 79 EGAPNESLCTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS 156 (357)
T ss_dssp C---CGGGCSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE
T ss_pred CCCcceeEecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE
Confidence 77532223344567889999999999985 6678899999999998654332222222579999999999999999999
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
|+.||.|++||++ .++.+..+.+|...|++++|+|++..++++++.|++|++||+++.+.. .
T Consensus 157 gs~dg~v~iwd~~---~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~--------------~- 218 (357)
T 4g56_B 157 GGKDFSVKVWDLS---QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA--------------T- 218 (357)
T ss_dssp EETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB--------------C-
T ss_pred EeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee--------------e-
Confidence 9999999999998 577889999999999999999998779999999999999999876320 0
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~ 543 (812)
T Consensus 219 -------------------------------------------------------------------------------- 218 (357)
T 4g56_B 219 -------------------------------------------------------------------------------- 218 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC-eEEEEeecCcceEEEEeccccc
Q psy4510 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS-TTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
......|...+.+++|+|++. +++++ +.|+.|++||+.++.
T Consensus 219 ------------------------------------~~~~~~~~~~v~~v~~sp~~~~~la~g--~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 219 ------------------------------------RIDFCASDTIPTSVTWHPEKDDTFACG--DETGNVSLVNIKNPD 260 (357)
T ss_dssp ------------------------------------BCCCTTCCSCEEEEEECTTSTTEEEEE--ESSSCEEEEESSCGG
T ss_pred ------------------------------------eeeeccccccccchhhhhcccceEEEe--ecccceeEEECCCCc
Confidence 000112233577788888755 55666 789999999998876
Q ss_pred cccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCC
Q psy4510 623 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFG 702 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~ 702 (812)
++..+.+|...|++++|+|+++.+||+|+.|++|+|||+.
T Consensus 261 -------------------------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~--------------- 300 (357)
T 4g56_B 261 -------------------------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD--------------- 300 (357)
T ss_dssp -------------------------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT---------------
T ss_pred -------------------------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC---------------
Confidence 6788999999999999999555567777776666666653
Q ss_pred EEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEec-CCceeEEeeccCCceEEeeecCc
Q psy4510 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~-dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+++ ++ ...+|.+.|++|+||| +++ +|||||.||+|++|++...
T Consensus 301 -----------------~~~----~~-~~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 301 -----------------FSE----VF-RDLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -----------------SCE----EE-EECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC--
T ss_pred -----------------CCc----Ee-EECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCCC
Confidence 333 12 2347999999999998 788 8999999999999999654
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-41 Score=352.28 Aligned_cols=294 Identities=20% Similarity=0.307 Sum_probs=254.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|...|++++|+|++++|++++.|+.|++||+.++ .++..+..|...|.+++|+|++ .+|++|+.|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d 118 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPSG-NYVACGGLD 118 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-------CEEEEEECSSSCEEEEEECTTS-SEEEEEETT
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------CcceEeecCCccEEEEEECCCC-CEEEEEeCC
Confidence 45678899999999999999999999999999999999875 7788899999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|++|++.+..........+.+|.+.|.++.|++++. +++++.|++|++||+++ ..++..+ .+|...|.+++|
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~ 192 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIET---GQQTTTF-TGHTGDVMSLSL 192 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEE
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCC---CcEEEEE-cCCCCceEEEEE
Confidence 99999999876532234566789999999999998874 89999999999999984 4455556 789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+|++++|++|+.||.|++||++ .+..+..+.+|...|++++|+|++ .+|++|+.|++|++||++..+.
T Consensus 193 ~~~~~~l~sg~~d~~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~-------- 260 (340)
T 1got_B 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQE-------- 260 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETT---TCSEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------
T ss_pred CCCCCEEEEEeCCCcEEEEECC---CCeeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcE--------
Confidence 9999999999999999999998 567888999999999999999987 6999999999999999976520
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+.... .
T Consensus 261 ---------~~~~~-------------------------------------------------------~---------- 266 (340)
T 1got_B 261 ---------LMTYS-------------------------------------------------------H---------- 266 (340)
T ss_dssp ---------EEEEC-------------------------------------------------------C----------
T ss_pred ---------EEEEc-------------------------------------------------------c----------
Confidence 00000 0
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
..+...|.+++|+|+|++++++ +.||.|+
T Consensus 267 -------------------------------------------------~~~~~~v~~~~~s~~g~~l~~g--~~d~~i~ 295 (340)
T 1got_B 267 -------------------------------------------------DNIICGITSVSFSKSGRLLLAG--YDDFNCN 295 (340)
T ss_dssp -------------------------------------------------TTCCSCEEEEEECTTSSEEEEE--ETTSEEE
T ss_pred -------------------------------------------------CCcccceEEEEECCCCCEEEEE--CCCCeEE
Confidence 0011257889999999999998 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+||+.+.. ++..+.+|.+.|.+++|+| ++.+||||+.|++|+|||
T Consensus 296 vwd~~~~~-------------------------~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 296 VWDALKAD-------------------------RAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTTCC-------------------------EEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred EEEcccCc-------------------------EeeEeecCCCcEEEEEEcC-CCCEEEEEcCCccEEecC
Confidence 99998775 6778999999999999999 888999999999999996
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=349.13 Aligned_cols=290 Identities=17% Similarity=0.268 Sum_probs=251.9
Q ss_pred cccCCCCCCeeeeeEcCC----CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 217 KPLGGHTNSAEDLQWSDL----KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~----~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
+.+.+|.+.|.+++|+++ +++|++|+.|++|++|++..+ .......+.+|...|.+++|+|++ .++++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~-----~~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s 99 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE-----RLDLQWSLEGHQLGVVSVDISHTL-PIAASSS 99 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECSSS-SEEEEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC-----CeeeeeeeccCCCCEEEEEECCCC-CEEEEEe
Confidence 566799999999999985 568999999999999999764 223456789999999999999998 7999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++||+.++. ....+..|...+.+++|+|+++ +|++++.||.|++|+++.. .....+ ..|...|.++
T Consensus 100 ~D~~i~lWd~~~~~----~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~---~~~~~~-~~~~~~v~~~ 170 (321)
T 3ow8_A 100 LDAHIRLWDLENGK----QIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESG---KKEYSL-DTRGKFILSI 170 (321)
T ss_dssp TTSEEEEEETTTTE----EEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTC---SEEEEE-ECSSSCEEEE
T ss_pred CCCcEEEEECCCCC----EEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCC---ceeEEe-cCCCceEEEE
Confidence 99999999999876 4566778888999999999999 6999999999999999854 334445 5788899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++|+.||.|++||++ .++.+..+.+|..+|.+++|+|++ .+|++++.|+.|++||++....
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~------ 240 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIA---TGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANL------ 240 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCE------
T ss_pred EECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcce------
Confidence 999999999999999999999998 567888999999999999999987 6999999999999999875410
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
T Consensus 241 -------------------------------------------------------------------------------- 240 (321)
T 3ow8_A 241 -------------------------------------------------------------------------------- 240 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcce
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK 612 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~ 612 (812)
...+.+|...|.+++|+|++++|+++ +.|++
T Consensus 241 -----------------------------------------------~~~~~~h~~~v~~~~~sp~~~~l~s~--s~D~~ 271 (321)
T 3ow8_A 241 -----------------------------------------------AGTLSGHASWVLNVAFCPDDTHFVSS--SSDKS 271 (321)
T ss_dssp -----------------------------------------------EEEECCCSSCEEEEEECTTSSEEEEE--ETTSC
T ss_pred -----------------------------------------------eEEEcCCCCceEEEEECCCCCEEEEE--eCCCc
Confidence 01233456688999999999999998 89999
Q ss_pred EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 613 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
|++||+.++. ++.++.+|...|++++|+| ++.+|++++.||+|+|||.
T Consensus 272 v~iwd~~~~~-------------------------~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 272 VKVWDVGTRT-------------------------CVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEETTTTE-------------------------EEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEEC
T ss_pred EEEEeCCCCE-------------------------EEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence 9999999876 7888999999999999999 7889999999999999996
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-42 Score=371.75 Aligned_cols=363 Identities=18% Similarity=0.266 Sum_probs=281.2
Q ss_pred CCCeeeeeEcCCCC-cEEEe----------eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE
Q psy4510 223 TNSAEDLQWSDLKT-ALQTV----------DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 223 ~~~V~~l~~s~~~~-~l~s~----------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
...|.+++|+|+++ +|+++ +.|+.|++|++.++. ..+++..+ .|...|.+++|+|++ .+|++|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~----~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~ 85 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAAD----SEKPIASL-QVDSKFNDLDWSHNN-KIIAGA 85 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGG----GCSCSCCC-CCSSCEEEEEECSSS-SCEEEE
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCC----CCcEEEEE-ecCCceEEEEECCCC-CeEEEE
Confidence 34788999999997 88999 889999999998752 11233333 588999999999998 799999
Q ss_pred eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC------cccceeecCCcC
Q psy4510 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN------TKSCMLTLPNAH 365 (812)
Q Consensus 292 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~ 365 (812)
+.||.|++|++............+.+|...|.+++|+|++..+|++++.||.|++||++... ....+.. ...|
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~ 164 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ-SMSS 164 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC-SCCS
T ss_pred ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc-ccCC
Confidence 99999999999873211114667788999999999999844479999999999999998654 2112222 2578
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEcccC------CCCEEEEEEccCCCcEEEEEECCC---C
Q psy4510 366 TSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH------TAPVTTVEWHPTESSTFASGGADD---Q 435 (812)
Q Consensus 366 ~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~s~~~dg---~ 435 (812)
...|.+++|+|+ +.+|++|+.||.|++||++ ..+.+..+..| ...|.+++|+|++..+|++++.|+ .
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 999999999999 6799999999999999998 46677777766 789999999999878999999998 9
Q ss_pred EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCC
Q psy4510 436 IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQK 515 (812)
Q Consensus 436 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (812)
|++||++.....
T Consensus 242 i~~~d~~~~~~~-------------------------------------------------------------------- 253 (416)
T 2pm9_A 242 ILIWDLRNANTP-------------------------------------------------------------------- 253 (416)
T ss_dssp CCEEETTSTTSC--------------------------------------------------------------------
T ss_pred EEEEeCCCCCCC--------------------------------------------------------------------
Confidence 999999765210
Q ss_pred CeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe-cccceEEEEE
Q psy4510 516 EIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI-RHRGCINRVR 594 (812)
Q Consensus 516 ~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 594 (812)
...+. +|...|.+++
T Consensus 254 ----------------------------------------------------------------~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 254 ----------------------------------------------------------------LQTLNQGHQKGILSLD 269 (416)
T ss_dssp ----------------------------------------------------------------SBCCCSCCSSCEEEEE
T ss_pred ----------------------------------------------------------------cEEeecCccCceeEEE
Confidence 00112 3555788899
Q ss_pred Eec-cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEE
Q psy4510 595 TCQ-YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 673 (812)
Q Consensus 595 ~s~-~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~la 673 (812)
|+| ++++++++ +.||.|++||+.++. ++..+.+|...|++++|+|+++.+|+
T Consensus 270 ~s~~~~~~l~s~--~~dg~v~~wd~~~~~-------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 270 WCHQDEHLLLSS--GRDNTVLLWNPESAE-------------------------QLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp ECSSCSSCEEEE--ESSSEEEEECSSSCC-------------------------EEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred eCCCCCCeEEEE--eCCCCEEEeeCCCCc-------------------------cceeecCCCCceEEEEECCCCCCEEE
Confidence 998 88889998 889999999998876 67889999999999999994338999
Q ss_pred ecCCCceEEEEecCCCceeEE------------EEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 674 TGDCKRNIHIWTPREAGAWSV------------YLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 674 s~s~Dg~v~iWd~~~~~~~~~------------~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
+++.|+.|++|++.++..... ..+.+.+..++.++..+.+ . + .....|...|+++
T Consensus 323 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~-~~~~~~~~~~~~~ 389 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVF---H---------L-QAPTWYGEPSPAA 389 (416)
T ss_dssp ECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSS---C---------C-CCCSTTCCCSCCC
T ss_pred EEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccc---c---------c-cCCccccCCccce
Confidence 999999999999987542211 1122223333333322211 1 1 3445578889999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+|||+|+ +|++++.|++|+||++...
T Consensus 390 ~~s~dg~-~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 390 HWAFGGK-LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp EEETTTE-EECBCTTSSCBCCBCCCCC
T ss_pred EEeeCCe-EEEEeCCCCeEEEEEeccC
Confidence 9999999 8999999999999998754
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=344.33 Aligned_cols=309 Identities=14% Similarity=0.153 Sum_probs=237.8
Q ss_pred EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC----CCCCCCCCCceEEcCCCCcEE
Q psy4510 201 IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG----KGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 201 v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.+.|++... ....|...|.+++|+|||++|++++ ++++++|+.... ...............|...|.
T Consensus 16 ~r~w~~~~~--------~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (344)
T 4gqb_B 16 AREWNLPPN--------APACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA 86 (344)
T ss_dssp -------CC--------SCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE
T ss_pred ccccCCCCC--------CcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEE
Confidence 456765432 2345778899999999999998887 778888873210 000000111223334677899
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
+++|+|+ +.|++|+.||+|+|||+.+++........+.+|.+.|++++|+|+++ +|++|+.||+|++||+++ ..
T Consensus 87 ~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~---~~ 160 (344)
T 4gqb_B 87 DLTWVGE--RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQ---QV 160 (344)
T ss_dssp EEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT---TE
T ss_pred EEEEeCC--CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCC---Cc
Confidence 9999998 47889999999999999988754444455678999999999999998 699999999999999984 45
Q ss_pred ceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcc--cCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 357 CMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 357 ~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
++..+ .+|...|++++|++++. +|++|+.||.|++||++. ++++..+. .|...+++++|+|++..+|++|+.|
T Consensus 161 ~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 161 VLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp EEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEE-cCcCCceEEEEecCCCCCceeeeccccccccccccc---cceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 56666 78999999999999985 899999999999999984 56666653 4566899999999888899999999
Q ss_pred CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC
Q psy4510 434 DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG 513 (812)
Q Consensus 434 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (812)
|.|++||+++.+.
T Consensus 237 g~v~~wd~~~~~~------------------------------------------------------------------- 249 (344)
T 4gqb_B 237 GTVSLVDTKSTSC------------------------------------------------------------------- 249 (344)
T ss_dssp SEEEEEESCC--C-------------------------------------------------------------------
T ss_pred CcEEEEECCCCcE-------------------------------------------------------------------
Confidence 9999999876521
Q ss_pred CCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEE
Q psy4510 514 QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRV 593 (812)
Q Consensus 514 ~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 593 (812)
...+.+|...|+++
T Consensus 250 ------------------------------------------------------------------~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 250 ------------------------------------------------------------------VLSSAVHSQCVTGL 263 (344)
T ss_dssp ------------------------------------------------------------------CEEEECCSSCEEEE
T ss_pred ------------------------------------------------------------------EEEEcCCCCCEEEE
Confidence 11244566688899
Q ss_pred EEeccCC-eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE
Q psy4510 594 RTCQYGS-TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 672 (812)
Q Consensus 594 ~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l 672 (812)
+|+|++. +|+++ +.|++|+|||+.+++ +..+.+|.+.|++|+|+|++..+|
T Consensus 264 ~fsp~g~~~lasg--s~D~~i~vwd~~~~~--------------------------~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 264 VFSPHSVPFLASL--SEDCSLAVLDSSLSE--------------------------LFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp EECSSSSCCEEEE--ETTSCEEEECTTCCE--------------------------EEEECCCSSCEEEEEECSSSTTEE
T ss_pred EEccCCCeEEEEE--eCCCeEEEEECCCCc--------------------------EEEEcCCCCCEEEEEEeCCCCeEE
Confidence 9999885 67777 899999999998775 446789999999999999655678
Q ss_pred EecCCCceEEEEecCCC
Q psy4510 673 ATGDCKRNIHIWTPREA 689 (812)
Q Consensus 673 as~s~Dg~v~iWd~~~~ 689 (812)
+|+|.|++|++|++.+.
T Consensus 316 as~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 316 TTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEETTSCEEEEECCC-
T ss_pred EEEcCCCeEEEEECCCC
Confidence 89999999999998753
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=336.98 Aligned_cols=297 Identities=18% Similarity=0.268 Sum_probs=239.7
Q ss_pred CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.....++.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++. ....+..|...|.+++|+|+++ +|++|+.|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d 76 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV----EVRSIQVTETPVRAGKFIARKN-WIIVGSDD 76 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGT-EEEEEETT
T ss_pred ceeEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc----eeEEeeccCCcEEEEEEeCCCC-EEEEECCC
Confidence 36678899999999999999999 899999999999999998876 5677888999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
++|++||+++ ..++..+ .+|...|++++|+|++++|++|+.||+|++||++. .......+.+|...|.+++|+|
T Consensus 77 ~~i~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~--~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 77 FRIRVFNYNT---GEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN--NWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp SEEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG--TTEEEEEECCCCSCEEEEEECT
T ss_pred CEEEEEECCC---CcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC--CcchhhhhcccCCcEEEEEECC
Confidence 9999999984 4455666 78999999999999999999999999999999984 3345677899999999999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.++.+|++|+.|++|++||+..... ....
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~----------------~~~~----------------------------------- 179 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTP----------------NFTL----------------------------------- 179 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSC----------------SEEE-----------------------------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCc----------------ccee-----------------------------------
Confidence 7668999999999999999875521 0000
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 180 -------------------------------------------------------------------------------- 179 (304)
T 2ynn_A 180 -------------------------------------------------------------------------------- 179 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccceEEEEEEec--cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCce
Q psy4510 582 YFIRHRGCINRVRTCQ--YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 659 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~--~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V 659 (812)
...|...+..+.|+| ++++++++ +.|++|++||+.++. ++.++.+|...|
T Consensus 180 -~~~~~~~v~~~~~~~~~~~~~l~s~--s~D~~i~iWd~~~~~-------------------------~~~~~~~h~~~v 231 (304)
T 2ynn_A 180 -TTGQERGVNYVDYYPLPDKPYMITA--SDDLTIKIWDYQTKS-------------------------CVATLEGHMSNV 231 (304)
T ss_dssp -ECCCTTCEEEEEECCSTTCCEEEEE--ETTSEEEEEETTTTE-------------------------EEEEEECCSSCE
T ss_pred -ccCCcCcEEEEEEEEcCCCCEEEEE--cCCCeEEEEeCCCCc-------------------------cceeeCCCCCCE
Confidence 001112344445544 66788888 899999999999876 788899999999
Q ss_pred EEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCccee
Q psy4510 660 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 739 (812)
Q Consensus 660 ~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~ 739 (812)
.+++|+| ++.+|++|+.||+|++||+ .+++ +..++.+|...|.
T Consensus 232 ~~~~~~p-~~~~l~s~s~Dg~i~iWd~--------------------------------~~~~----~~~~~~~~~~~~~ 274 (304)
T 2ynn_A 232 SFAVFHP-TLPIIISGSEDGTLKIWNS--------------------------------STYK----VEKTLNVGLERSW 274 (304)
T ss_dssp EEEEECS-SSSEEEEEETTSCEEEEET--------------------------------TTCC----EEEEECCSSSSEE
T ss_pred EEEEECC-CCCEEEEEcCCCeEEEEEC--------------------------------CCCc----eeeeccCCCccEE
Confidence 9999999 6666666666666655554 4444 4567788889999
Q ss_pred EeEEecCCcee-EEeeccCCceEEeeecC
Q psy4510 740 DLQWSPGEKRV-LASCSVDRSNRIGARRD 767 (812)
Q Consensus 740 ~l~fs~dg~~~-L~s~s~Dg~i~iWd~~~ 767 (812)
+++|+|+++.. ||+|+ |..+.+|++.+
T Consensus 275 ~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp EEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred EEEECCCCCceEEEEec-CCceEEEEecc
Confidence 99999998644 56555 55577777754
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=345.62 Aligned_cols=328 Identities=19% Similarity=0.331 Sum_probs=251.4
Q ss_pred cccccCCCCC-CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCc-eEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 215 DQKPLGGHTN-SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~-~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
....+.+|.. .|.+++|+|++++|++|+.|+.|++|++.++ ..... ....+|...|.+++|+|++ .+|++|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-----~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s 80 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-----SWICKSVLSEGHQRTVRKVAWSPCG-NYLASAS 80 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-----EEEEEEEECSSCSSCEEEEEECTTS-SEEEEEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-----cceeeeeeccccCCcEEEEEECCCC-CEEEEEE
Confidence 4567889988 9999999999999999999999999999874 11112 2236899999999999998 8999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++|++..... .....+.+|...|.+++|+|+++ +|++|+.|++|++||++......++..+ ..|...|.++
T Consensus 81 ~D~~v~iw~~~~~~~--~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~ 156 (345)
T 3fm0_A 81 FDATTCIWKKNQDDF--ECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHV 156 (345)
T ss_dssp TTSCEEEEEECCC-E--EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEEE
T ss_pred CCCcEEEEEccCCCe--EEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEEE
Confidence 999999999887641 13567889999999999999998 6999999999999999865544455555 7899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++|+.|+.|++||++... ......+.+|...|++++|+|++ .+|++++.|++|++||+......
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~-~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~----- 229 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNE----- 229 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCT-----
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCC-EEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCC-----
Confidence 999999999999999999999997411 13457889999999999999997 69999999999999997543210
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
..+.. . ..+ +. ...
T Consensus 230 ------------------~~~~~------------~-~~~-------------------------------~~--~~~-- 243 (345)
T 3fm0_A 230 ------------------QGVAC------------S-GSD-------------------------------PS--WKC-- 243 (345)
T ss_dssp ------------------TCCCC------------C-----------------------------------CE--EEE--
T ss_pred ------------------cccee------------e-ccC-------------------------------Cc--cce--
Confidence 00000 0 000 00 000
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe-cccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI-RHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
...+. .|...|.+++|+|++..++++ +.|+
T Consensus 244 -----------------------------------------------~~~~~~~h~~~v~~v~~~~~~~~l~s~--~~d~ 274 (345)
T 3fm0_A 244 -----------------------------------------------ICTLSGFHSRTIYDIAWCQLTGALATA--CGDD 274 (345)
T ss_dssp -----------------------------------------------EEEECSSCSSCEEEEEECTTTCCEEEE--ETTS
T ss_pred -----------------------------------------------eEEecCCCCCcEEEEEEecCCCEEEEE--eCCC
Confidence 01111 256689999999999999998 7899
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~ 690 (812)
.|++|+............ ........+|...|++|+|+|+++.+||||+.||+|++|++.+++
T Consensus 275 ~i~vw~~~~~~~~~~~~~----------------~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 275 AIRVFQEDPNSDPQQPTF----------------SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp CEEEEEECTTSCTTSCCE----------------EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred eEEEEEeCCCCCcceeeE----------------EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 999999876531100000 001233468999999999999544689999999999999886543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=357.70 Aligned_cols=310 Identities=21% Similarity=0.320 Sum_probs=253.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+.+.+.+|.+.|++++|+|++++|++|+.|++|++||..++ .....+.+|...|.+++|+|++ .+|++|+.|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-------~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d 129 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-------QKTHAIKLHCPWVMECAFAPNG-QSVACGGLD 129 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-------EEEEEEECCCTTCCCCEECTTS-SEEEECCSS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ccceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 55678999999999999999999999999999999999875 7788899999999999999999 899999999
Q ss_pred CcEEEEeCCCCCc---ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce-eecCCcCCCCeE
Q psy4510 295 RNIHIWTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM-LTLPNAHTSDVN 370 (812)
Q Consensus 295 g~i~vwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~ 370 (812)
+.|++|++.+... .......+.+|.+.|.+++|.|++...|++|+.|++|++||++++...... .....+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 9999999976421 111345678999999999999987667999999999999999854322111 112357899999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhH
Q psy4510 371 VISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449 (812)
Q Consensus 371 ~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 449 (812)
+++|++ ++++|++|+.||.|++||++. ....+..+.+|.+.|++++|+|++ .+|++|+.|++|++||+++..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~--~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~---- 282 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRI--TSRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGH---- 282 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTT--TCCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTE----
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCC--CCcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCc----
Confidence 999987 678999999999999999985 456788999999999999999987 699999999999999998762
Q ss_pred HHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 450 EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
.+..... .+.
T Consensus 283 -------------~~~~~~~-----------------------------------------------------~~~---- 292 (380)
T 3iz6_a 283 -------------QLQVYNR-----------------------------------------------------EPD---- 292 (380)
T ss_dssp -------------EEEEECC-----------------------------------------------------CCS----
T ss_pred -------------EEEEecc-----------------------------------------------------ccc----
Confidence 1110000 000
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
....+...|++++|+|+|+++++| +.
T Consensus 293 ----------------------------------------------------~~~~~~~~v~~~~~s~~g~~l~~g--~~ 318 (380)
T 3iz6_a 293 ----------------------------------------------------RNDNELPIVTSVAFSISGRLLFAG--YS 318 (380)
T ss_dssp ----------------------------------------------------SSCCSSCSCSEEEECSSSSEEEEE--CT
T ss_pred ----------------------------------------------------ccccccCceEEEEECCCCCEEEEE--EC
Confidence 000111257789999999999998 89
Q ss_pred cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee----cCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 610 VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF----SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 610 dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
||.|++||+..+. .+..+ .+|.+.|++++|+| ++.+|+||+.|++|+||+
T Consensus 319 dg~i~vwd~~~~~-------------------------~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 319 NGDCYVWDTLLAE-------------------------MVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp TSCEEEEETTTCC-------------------------EEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCc-------------------------eEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEe
Confidence 9999999998765 33333 68999999999999 788999999999999999
Q ss_pred cCCC
Q psy4510 686 PREA 689 (812)
Q Consensus 686 ~~~~ 689 (812)
+...
T Consensus 373 ~~~~ 376 (380)
T 3iz6_a 373 FSGH 376 (380)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 8653
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=354.05 Aligned_cols=265 Identities=17% Similarity=0.288 Sum_probs=222.7
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
....+.||.+.|++++|+| ++++||||+.||+|+|||+.++. ....+.+|...|.+++|+|++++|++++.|+.+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQ----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTE----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred EeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCc----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 4556779999999999999 99999999999999999998876 567788999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQ 326 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v~~~~ 326 (812)
++|++...............+.+|.+.+.++.|+|++...|++|+.|++|++||+.++....... ....+|...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 99999764322223345567899999999999999876789999999999999999887322111 12267999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|.+..+|++|+.||+|++||++.. ..++..+ .+|...|++++|+|++++|++|+.||+|++||++ .+..+..
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~--~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~---~~~~~~~ 286 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRIT--SRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR---TGHQLQV 286 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTT--CCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT---TTEEEEE
T ss_pred eecCCCCEEEEEECCCeEEEEECCCC--CcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC---CCcEEEE
Confidence 98855458999999999999999842 2344555 7899999999999999999999999999999998 4556666
Q ss_pred cccCC-------CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 407 FKHHT-------APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 407 ~~~h~-------~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+..+. ..|++++|+|++ .+|++|+.||.|++||+...
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTC
T ss_pred ecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCC
Confidence 65432 348999999997 69999999999999998755
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.86 Aligned_cols=291 Identities=17% Similarity=0.202 Sum_probs=237.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC-------CCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-------AGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~-------~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+|...|.+++|+| +|++|++++ |+++++||... .............|...|.+++|+|++ .|++++.||.
T Consensus 28 ~~~~~v~~~~fs~-dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRS-DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECT-TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred cccCCEEEEEECC-CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 5667899999999 999999988 67888886321 111111122233467889999999985 6889999999
Q ss_pred eEEeeCCCCCCCCCCCCCc----eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 247 LAEHNKKRGKGPGIPTPPL----FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~----~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
|+|||+.++ +.+ ..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|
T Consensus 105 v~lWd~~~~-------~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~----~~~~~~~h~~~V 172 (344)
T 4gqb_B 105 VELWELDEN-------ETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV----VLSSYRAHAAQV 172 (344)
T ss_dssp EEEEEECTT-------SSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCE
T ss_pred EEEEeccCC-------CceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEcCcCCce
Confidence 999999886 333 2355899999999999999 899999999999999999886 677889999999
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
++++|+|++..+|++|+.||+|++||+++.. +...+. ..|...+++++|+|++ ++|++|+.||.|++||++ .
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~---~ 246 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPK---PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK---S 246 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSS---CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC---C
T ss_pred EEEEecCCCCCceeeeccccccccccccccc---eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC---C
Confidence 9999999998789999999999999999543 333331 3566779999999965 589999999999999998 5
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 480 (812)
++++..+.+|...|++++|+|++..+|++|+.|++|++||+... ++.....+...|.+++|+|
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----------------~~~~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----------------ELFRSQAHRDFVRDATWSP 309 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-----------------EEEEECCCSSCEEEEEECS
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----------------cEEEEcCCCCCEEEEEEeC
Confidence 77889999999999999999998778999999999999999876 4555556667899999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCC
Q psy4510 481 QLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+++.++++++.|+..++|....
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC
T ss_pred CCCeEEEEEcCCCeEEEEECCC
Confidence 9988999998888766665544
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=338.51 Aligned_cols=289 Identities=19% Similarity=0.326 Sum_probs=246.5
Q ss_pred cCcCCCCCceEEEEeCCC---CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 170 FSFSGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~---~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
..+.+|.+.|++++|+|. ++.+||||+.|++|+||++..... .....+.+|...|.+++|++++.++++++.|+.
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~--~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL--DLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe--eeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 344589999999999982 367999999999999999876531 134568999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+..|...+.+++|+|++ .+|++|+.+|.|++|++.++. ....+..|...|.+++
T Consensus 104 i~lWd~~~~-------~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~----~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 104 IRLWDLENG-------KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGK----KEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEEETTTT-------EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCS----EEEEEECSSSCEEEEE
T ss_pred EEEEECCCC-------CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCc----eeEEecCCCceEEEEE
Confidence 999999885 7788888999999999999999 899999999999999999887 4556778889999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|+++ +|++|+.||.|++||+++ ...+..+ .+|...|++++|+|++++|++|+.||.|++||++ ....+..
T Consensus 172 ~spdg~-~lasg~~dg~i~iwd~~~---~~~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~---~~~~~~~ 243 (321)
T 3ow8_A 172 YSPDGK-YLASGAIDGIINIFDIAT---GKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGT 243 (321)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT---TCCEEEE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC---CcEEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC---CcceeEE
Confidence 999999 699999999999999984 4455566 7899999999999999999999999999999998 4677889
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+.+|...|.+++|+|++ .+|++++.|++|++||+.+.. .+.....+...|.+++|+|++. .+
T Consensus 244 ~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~----------------~~~~~~~h~~~v~~v~~s~~g~-~l 305 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT----------------CVHTFFDHQDQVWGVKYNGNGS-KI 305 (321)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----------------EEEEECCCSSCEEEEEECTTSS-EE
T ss_pred EcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE----------------EEEEEcCCCCcEEEEEECCCCC-EE
Confidence 99999999999999997 699999999999999998773 2223334456899999999976 45
Q ss_pred EEEeCCC-eEEEE
Q psy4510 487 ISTANSG-FNIFR 498 (812)
Q Consensus 487 ~~~~~~~-~~~~~ 498 (812)
++++.++ +.+|+
T Consensus 306 ~s~~~d~~i~vwd 318 (321)
T 3ow8_A 306 VSVGDDQEIHIYD 318 (321)
T ss_dssp EEEETTCCEEEEE
T ss_pred EEEeCCCeEEEEe
Confidence 5555554 56665
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=342.99 Aligned_cols=295 Identities=14% Similarity=0.184 Sum_probs=240.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecC------CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~------dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
+|...|.+++||| +|++||+|+. |+.|++|+..++...........+|...|.+++|+|+++ +++++.|+.|
T Consensus 40 ~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 40 CMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred cccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 7999999999999 9999999997 788999998887654445556678999999999999986 5567889999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++||+.++.. .........+|.+.|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|++++|
T Consensus 118 ~lWd~~~~~~---~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~----~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 118 ELWEILEKES---LLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA----VLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp EEC-----------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEE
T ss_pred EEeeccccce---eEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEE
Confidence 9999987621 112234566899999999999999 899999999999999999876 56778899999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
+|++..++++++.||.|++||++++..... ... ..|...+++++|+|++ .+|++|+.|+.|++||++ .++.+..
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~-~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~---~~~~~~~ 264 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDF-CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK---NPDSAQT 264 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCC-TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS---CGGGCEE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeee-eee-ccccccccchhhhhcccceEEEeecccceeEEECC---CCcEeEE
Confidence 999877899999999999999986543222 122 4677889999999985 589999999999999998 4678889
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+.+|...|++++|+|++..+|++|+.|++|++||+.+. +++....+...|++++|+|....++
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----------------~~~~~~~H~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----------------EVFRDLSHRDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----------------EEEEECCCSSCEEEEEECSSSTTEE
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----------------cEeEECCCCCCEEEEEEeCCCCCEE
Confidence 99999999999999998789999999999999999877 4444555667899999999666788
Q ss_pred EEEeCCCeEEEEeC
Q psy4510 487 ISTANSGFNIFRTI 500 (812)
Q Consensus 487 ~~~~~~~~~~~~~~ 500 (812)
++++.|+...+|.+
T Consensus 328 ~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 328 TTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEETTSCEEEEEC
T ss_pred EEEcCCCeEEEEEC
Confidence 88887775444443
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=339.66 Aligned_cols=295 Identities=20% Similarity=0.310 Sum_probs=251.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|...|++++|+|++++|++++.|+.|++||..++ .....+..|...|.+++|+|++ .+|++|+.|
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d 127 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-------NKEHAVTMPCTWVMACAYAPSG-CAIACGGLD 127 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCEEEECTTS-SEEEEESTT
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CcceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 44567899999999999999999999999999999998874 6677888899999999999999 899999999
Q ss_pred CcEEEEeCCCCCc--ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREAGA--WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
+.+++|++..... .......+.+|...|.+++|+|++. .|++++.||+|++||+++ ..++..+ .+|...|.++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~---~~~~~~~-~~h~~~v~~~ 202 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVES---GQLLQSF-HGHGADVLCL 202 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEE
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC---CeEEEEE-cCCCCCeEEE
Confidence 9999999875421 1113455678999999999999998 599999999999999984 4455666 7899999999
Q ss_pred EEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 373 SWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 373 ~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+|+|. +++|++|+.||.|++||++ .++.+..+.+|...|++++|+|++ .+|++++.|++|++||++....
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~---- 274 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADRE---- 274 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE----
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE----
Confidence 99884 6799999999999999998 577889999999999999999987 6999999999999999875410
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeE
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTI 530 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~ 530 (812)
..... .
T Consensus 275 -------------~~~~~-------------------------------------------------------~------ 280 (354)
T 2pbi_B 275 -------------VAIYS-------------------------------------------------------K------ 280 (354)
T ss_dssp -------------EEEEC-------------------------------------------------------C------
T ss_pred -------------EEEEc-------------------------------------------------------C------
Confidence 00000 0
Q ss_pred EEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc
Q psy4510 531 ISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV 610 (812)
Q Consensus 531 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d 610 (812)
..+...+.+++|+|++++++++ +.|
T Consensus 281 -----------------------------------------------------~~~~~~~~~~~~s~~g~~l~~g--~~d 305 (354)
T 2pbi_B 281 -----------------------------------------------------ESIIFGASSVDFSLSGRLLFAG--YND 305 (354)
T ss_dssp -----------------------------------------------------TTCCSCEEEEEECTTSSEEEEE--ETT
T ss_pred -----------------------------------------------------CCcccceeEEEEeCCCCEEEEE--ECC
Confidence 0001256788999999999998 899
Q ss_pred ceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 611 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+.|++||+.++. ++..+.+|.+.|++++|+| ++.+|++|+.|++|+||+
T Consensus 306 ~~i~vwd~~~~~-------------------------~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 306 YTINVWDVLKGS-------------------------RVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SCEEEEETTTCS-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred CcEEEEECCCCc-------------------------eEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 999999998776 5778899999999999999 888999999999999996
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=360.30 Aligned_cols=258 Identities=18% Similarity=0.377 Sum_probs=212.7
Q ss_pred CCCceEEEEeCCCCCC-eEEEe----------cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 175 HLTEGFAMDWSSTEPG-VLATG----------DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~-~lat~----------~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
+..+|.+++|+| ++. +||+| +.||.|+||++.++... .......|...|++++|+|++++|++++.
T Consensus 11 ~~~~v~~~~~sp-~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSH-DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCS-SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhhhcceEeeCC-CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEecCCceEEEEECCCCCeEEEEcc
Confidence 456789999999 876 99999 88999999999876532 12223468999999999999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-----ceeccccccCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-----WQVDQKPLVGH 318 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~~~~~h 318 (812)
|+.|++|++..... ...++..+.+|...|.+++|+|++..+|++|+.||.|++||+.+... .......+.+|
T Consensus 88 dg~v~vw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 88 NGSLELYSTNEANN---AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSCEEEECCSSTTS---CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred CCeEEEeecccccc---cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 99999999987210 12577888999999999999998448999999999999999988751 11112345679
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC------CCCeEEEEEcCCC-CEEEEEeCCC---
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH------TSDVNVISWNRTE-PLIVSGGDDG--- 388 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~v~~l~~~~~~-~~l~sg~~dg--- 388 (812)
...|.+++|+|++..+|++++.||.|++||++.. ..+..+ ..+ ...|.+++|+|++ .+|++++.|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK---KEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT---EEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC---CcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 9999999999995558999999999999999853 344444 333 7889999999998 5999999998
Q ss_pred cEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++. ...++..+. +|...|++++|+|.++.+|++++.|+.|++||+...
T Consensus 241 ~i~~~d~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 241 SILIWDLRN--ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CCCEEETTS--TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred eEEEEeCCC--CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 999999985 235677787 899999999999944579999999999999998765
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=332.54 Aligned_cols=305 Identities=22% Similarity=0.344 Sum_probs=247.6
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
....++.+|.+.|.+++|+|+++.+|++|+.|++|++|++..... .......+.+|...|.+++|+|+++ +|++|+.|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D 86 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-YALSASWD 86 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-EEEEEeCC
Confidence 345678999999999999998768999999999999999875432 1224567889999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
++|++||+++ ..++..+ .+|...|.+++|+|++.+|++|+.|+.|++||++ +..+..+.+|...|.++.|+|
T Consensus 87 ~~v~~wd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~----~~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 87 KTLRLWDVAT---GETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK----GQCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp SEEEEEETTT---TEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECC
T ss_pred CEEEEEECCC---CCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCeEEEEeccCCcEEEEEEcc
Confidence 9999999984 4455556 7899999999999999999999999999999995 467888999999999999999
Q ss_pred CC-----CcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 422 TE-----SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 422 ~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
.. ..+|++++.|+.|++||+...+.
T Consensus 159 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------------------------------------------- 188 (319)
T 3frx_A 159 NEKADDDSVTIISAGNDKMVKAWNLNQFQI-------------------------------------------------- 188 (319)
T ss_dssp C------CCEEEEEETTSCEEEEETTTTEE--------------------------------------------------
T ss_pred CCCCCCCccEEEEEeCCCEEEEEECCcchh--------------------------------------------------
Confidence 63 34899999999999999865410
Q ss_pred EEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCC
Q psy4510 497 FRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKD 576 (812)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (812)
T Consensus 189 -------------------------------------------------------------------------------- 188 (319)
T 3frx_A 189 -------------------------------------------------------------------------------- 188 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC
Q psy4510 577 PVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 656 (812)
Q Consensus 577 ~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~ 656 (812)
...+.+|...|.+++|+|++++|+++ +.||.|++||+.+.. ++..+..+
T Consensus 189 ---~~~~~~h~~~v~~~~~sp~g~~l~s~--~~dg~i~iwd~~~~~-------------------------~~~~~~~~- 237 (319)
T 3frx_A 189 ---EADFIGHNSNINTLTASPDGTLIASA--GKDGEIMLWNLAAKK-------------------------AMYTLSAQ- 237 (319)
T ss_dssp ---EEEECCCCSCEEEEEECTTSSEEEEE--ETTCEEEEEETTTTE-------------------------EEEEEECC-
T ss_pred ---heeecCCCCcEEEEEEcCCCCEEEEE--eCCCeEEEEECCCCc-------------------------EEEEecCC-
Confidence 01233456688999999999999998 899999999999876 56666654
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCc
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 736 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~ 736 (812)
..|.+++|+| ++.+|++++.+ .+++|++..+.... .+... .......|..
T Consensus 238 ~~v~~~~~sp-~~~~la~~~~~-~i~v~~~~~~~~~~-----------------------~~~~~-----~~~~~~~~~~ 287 (319)
T 3frx_A 238 DEVFSLAFSP-NRYWLAAATAT-GIKVFSLDPQYLVD-----------------------DLRPE-----FAGYSKAAEP 287 (319)
T ss_dssp SCEEEEEECS-SSSEEEEEETT-EEEEEEETTEEEEE-----------------------EECCC-----CTTCCGGGCC
T ss_pred CcEEEEEEcC-CCCEEEEEcCC-CcEEEEeCcCeeee-----------------------ccCcc-----ccccccCcCc
Confidence 6899999999 78788887754 48899875432211 11111 1223455677
Q ss_pred ceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 737 SVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 737 ~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
.|.+++|||||+ +|++|+.||+|+|||+..+
T Consensus 288 ~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 288 HAVSLAWSADGQ-TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred ceeEEEECCCCC-EEEEeecCceEEEEEEeec
Confidence 899999999999 8999999999999999764
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=354.18 Aligned_cols=348 Identities=18% Similarity=0.243 Sum_probs=274.3
Q ss_pred CCCCceEEEEeCCCCCC-eEEEecCCCcEEEEcc----CCCC------cccccccccCC------CCCCeeeeeEcCCCC
Q psy4510 174 GHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTP----REAG------AWQVDQKPLGG------HTNSAEDLQWSDLKT 236 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~----~~~~------~~~~~~~~l~~------h~~~V~~l~~s~~~~ 236 (812)
.|.+.|++++|+| +++ +||+|+.||.|+||++ .++. ........+.+ |...|++++|+|+++
T Consensus 43 ~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 43 VKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 5669999999999 999 9999999999999999 7766 22222333333 688999999999999
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
+|++++.++.|++|+.. ...+..+.+|...|.+++|+|++ .+|++++.||.|++||+.++. ....+.
T Consensus 122 ~l~~~~~dg~i~i~~~~--------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~----~~~~~~ 188 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKT--------GALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGT----VMQHFE 188 (425)
T ss_dssp EEEEEETTSCEEEEETT--------SCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTE----EEEEEC
T ss_pred EEEEEeCCCeEEEEeCC--------CCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCc----EEEEee
Confidence 99999999999999933 27788899999999999999998 799999999999999998876 344555
Q ss_pred CCCCC---------------EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 317 GHTNS---------------VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 317 ~h~~~---------------v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
.+... +.+++|+|++ .+++++.+|.|++||++.. ..+..+ ..|...|.+++|+|++++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~---~~~~~~-~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEK---TPTGKL-IGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp CC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCS---SCSEEE-CCCSSCEEEEEEETTTTEE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCC---ceeeee-ccCCCceEEEEECCCCCEE
Confidence 55555 9999999986 4899999999999999853 344455 6889999999999999999
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
++++.||.|++||++ ....+..+..|...|.+++|+|++ +|++++.|+.|++||+.....
T Consensus 263 ~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~--------------- 322 (425)
T 1r5m_A 263 LSASDDGTLRIWHGG---NGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTL--------------- 322 (425)
T ss_dssp EEEETTSCEEEECSS---SBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEE---------------
T ss_pred EEEcCCCEEEEEECC---CCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcE---------------
Confidence 999999999999998 466788888999999999999986 899999999999999875510
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
.
T Consensus 323 --~----------------------------------------------------------------------------- 323 (425)
T 1r5m_A 323 --L----------------------------------------------------------------------------- 323 (425)
T ss_dssp --E-----------------------------------------------------------------------------
T ss_pred --e-----------------------------------------------------------------------------
Confidence 0
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
..+..|...|.+++|+|++++++++ +.||.|++|++.+.
T Consensus 324 ---------------------------------------~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 324 ---------------------------------------ALSIVDGVPIFAGRISQDGQKYAVA--FMDGQVNVYDLKKL 362 (425)
T ss_dssp ---------------------------------------EEEECTTCCEEEEEECTTSSEEEEE--ETTSCEEEEECHHH
T ss_pred ---------------------------------------EecccCCccEEEEEEcCCCCEEEEE--ECCCeEEEEECCCC
Confidence 0112233478888999999999998 78999999999876
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCC--ceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT--EGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~--~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
........ .............++..+.+|.. .|++++|+| ++++|++++.||.|++|+++
T Consensus 363 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 363 NSKSRSLY-----GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HC-------------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEEEECC
T ss_pred ccceeeee-----cccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceEEEEeec
Confidence 42110000 00000011112336788999977 999999999 78899999999999999985
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=352.36 Aligned_cols=367 Identities=14% Similarity=0.162 Sum_probs=274.3
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeC----CCCCCCCCCCCCceEEcC----
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNK----KRGKGPGIPTPPLFSFSG---- 270 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~----~~~~~~~~~~~~~~~~~~---- 270 (812)
.+.+|++.... .......|..+|++++|+|+++ +|++++.|+.|++|++ .++.... .......+..
T Consensus 26 ~~~~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 100 (425)
T 1r5m_A 26 IDSSDDLDGFV----KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYW-KLTIIAELRHPFAL 100 (425)
T ss_dssp --------CCC----EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CE-EEEEEEEEECCCCC
T ss_pred ccccccchhhh----hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccc-cccccccccccccc
Confidence 34567665433 2233345669999999999999 9999999999999999 7651000 0002333333
Q ss_pred ------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeE
Q psy4510 271 ------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 271 ------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
|.+.|.+++|+|++ .+|++|+.||.|++|+ .++. ....+.+|...|.+++|+|+++ +|++++.||.|
T Consensus 101 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~-~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i 173 (425)
T 1r5m_A 101 SASSGKTTNQVTCLAWSHDG-NSIVTGVENGELRLWN-KTGA----LLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVT 173 (425)
T ss_dssp C------CBCEEEEEECTTS-SEEEEEETTSCEEEEE-TTSC----EEEEECCCCSCEEEEEECTTSS-EEEEEETTCCE
T ss_pred cccccCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEe-CCCC----eeeeccCCCccEEEEEECCCCC-EEEEEecCCeE
Confidence 78899999999998 8999999999999999 3443 4667788999999999999998 69999999999
Q ss_pred EEEECCCCCcccceeecCCcCCCC---------------eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSD---------------VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~---------------v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
++||+++. ..+..+ ..+... +.+++|++++ .+++++.+|.|++||++ ....+..+..
T Consensus 174 ~iwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~---~~~~~~~~~~ 245 (425)
T 1r5m_A 174 ILWNVISG---TVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQIT---EKTPTGKLIG 245 (425)
T ss_dssp EEEETTTT---EEEEEE-CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETT---CSSCSEEECC
T ss_pred EEEECCCC---cEEEEe-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcC---CCceeeeecc
Confidence 99999843 334444 444444 8999999875 68899999999999998 4677888889
Q ss_pred CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 410 h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
|...|.+++|+|++ .+|++++.|+.|++||+...+.
T Consensus 246 ~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~------------------------------------------- 281 (425)
T 1r5m_A 246 HHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNS------------------------------------------- 281 (425)
T ss_dssp CSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSC-------------------------------------------
T ss_pred CCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCcc-------------------------------------------
Confidence 99999999999987 5999999999999999875421
Q ss_pred eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCC
Q psy4510 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
T Consensus 282 -------------------------------------------------------------------------------- 281 (425)
T 1r5m_A 282 -------------------------------------------------------------------------------- 281 (425)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCe
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL 649 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (812)
...+..|...|.+++|+|++ .++++ +.||.|++||+.++. ++
T Consensus 282 ----------~~~~~~~~~~i~~~~~~~~~-~l~~~--~~d~~i~i~d~~~~~-------------------------~~ 323 (425)
T 1r5m_A 282 ----------QNCFYGHSQSIVSASWVGDD-KVISC--SMDGSVRLWSLKQNT-------------------------LL 323 (425)
T ss_dssp ----------SEEECCCSSCEEEEEEETTT-EEEEE--ETTSEEEEEETTTTE-------------------------EE
T ss_pred ----------ceEecCCCccEEEEEECCCC-EEEEE--eCCCcEEEEECCCCc-------------------------Ee
Confidence 01122344578889999998 77777 789999999998876 67
Q ss_pred eeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccc
Q psy4510 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQK 729 (812)
Q Consensus 650 ~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~ 729 (812)
..+.+|...|.+++|+| ++.+|++++.||.|++|++.++....... .+..++.+... ..+ ++.
T Consensus 324 ~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~---------~~~~~~~~~~~---~~~----~~~ 386 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSL---------YGNRDGILNPL---PIP----LYA 386 (425)
T ss_dssp EEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC-----------------------CE---ECC----EEE
T ss_pred EecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeee---------ecccccccCcc---cch----hhh
Confidence 78889999999999999 78899999999999999997654221111 12223322211 111 456
Q ss_pred cccCCCc--ceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 730 PLVGHTN--SVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 730 ~~~gH~~--~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.+.+|.. .|++++|+|+++ +|++++.||.|++|+++
T Consensus 387 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 387 SYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred hhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 7888876 999999999999 89999999999999986
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=335.03 Aligned_cols=294 Identities=17% Similarity=0.283 Sum_probs=247.9
Q ss_pred CCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 164 ~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
+..+....+.||.+.|++++|+| ++++||||+.||+|+|||+.++. ....+..|...|.+++|+|++++|++++.
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCC----EEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred ccchhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCC----cceEeecCCccEEEEEECCCCCEEEEEeC
Confidence 44556677889999999999999 99999999999999999998876 56677889999999999999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
|+.+++|++.++.. .......+.+|.+.|.++.|++++ .+++|+.|++|++||+.++. ....+.+|.+.|.
T Consensus 118 d~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~ 188 (340)
T 1got_B 118 DNICSIYNLKTREG---NVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQ----QTTTFTGHTGDVM 188 (340)
T ss_dssp TCEEEEEETTTCSB---SCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTE----EEEEECCCSSCEE
T ss_pred CCeEEEEECccCCC---cceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCc----EEEEEcCCCCceE
Confidence 99999999987410 123456788999999999999985 69999999999999999876 5677889999999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+++|+|++. +|++|+.||.|++||+++ ..++..+ .+|...|++++|+|++++|++|+.||.|++||++. .+.
T Consensus 189 ~~~~~~~~~-~l~sg~~d~~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~~~ 260 (340)
T 1got_B 189 SLSLAPDTR-LFVSGACDASAKLWDVRE---GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRA---DQE 260 (340)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTT---CSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEE
T ss_pred EEEECCCCC-EEEEEeCCCcEEEEECCC---CeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC---CcE
Confidence 999999998 799999999999999984 4455666 78999999999999999999999999999999984 455
Q ss_pred eEEcc--cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 404 VATFK--HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 404 ~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+..+. .+...|++++|+|++ .+|++|+.|+.|++||+.... .+.....+...|.+++|+|+
T Consensus 261 ~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~----------------~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 261 LMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKAD----------------RAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC----------------EEEEEECCSSCEEEEEECTT
T ss_pred EEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCc----------------EeeEeecCCCcEEEEEEcCC
Confidence 55554 234579999999997 699999999999999998763 23334455668999999999
Q ss_pred CCCEEEEEeCCC-eEEE
Q psy4510 482 LPGTIISTANSG-FNIF 497 (812)
Q Consensus 482 ~~~~~~~~~~~~-~~~~ 497 (812)
+.. +++++.|+ +.+|
T Consensus 324 g~~-l~s~s~D~~i~iW 339 (340)
T 1got_B 324 GMA-VATGSWDSFLKIW 339 (340)
T ss_dssp SSC-EEEEETTSCEEEE
T ss_pred CCE-EEEEcCCccEEec
Confidence 854 55555554 5555
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=331.97 Aligned_cols=254 Identities=19% Similarity=0.323 Sum_probs=217.2
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....+.||.+.|++++|+|.++++||||+.|++|++|++..... .......+.+|...|.+++|+|++++|++++.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 34456799999999999994558999999999999999875432 22346678999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.|++|++||+... ....+.+|...|.+++
T Consensus 89 v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-----~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 89 LRLWDVATG-------ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-----CLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-----EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-----eEEEEeccCCcEEEEE
Confidence 999999885 7788999999999999999998 89999999999999999743 4567789999999999
Q ss_pred EcCCCC-----eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 327 WSPGEK-----RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 327 ~~p~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
|+|.+. .+|++++.|+.|++||++. ......+ .+|...|++++|+|++++|++|+.||.|++||++ ..
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~---~~ 228 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQ---FQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA---AK 228 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTT---TEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT---TT
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCc---chhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC---CC
Confidence 999643 2699999999999999984 3344555 7899999999999999999999999999999998 45
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+..+.. ...|.+++|+|++ .+|++++.+ .+++|++...
T Consensus 229 ~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 229 KAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp EEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETTE
T ss_pred cEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCcC
Confidence 66777764 4689999999997 577777754 5999998654
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=332.33 Aligned_cols=311 Identities=17% Similarity=0.292 Sum_probs=230.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc-c-CCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-V-GHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~-~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+++.++.+|.+.|++++|+|+ +|++|+.|++|++|++..+... ....+ . +|...|.+++|+|+++ +|++|+.
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~ 78 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT--LIDVLDETAHKKAIRSVAWRPHTS-LLAAGSF 78 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE--EEEEECTTCCCSCEEEEEECTTSS-EEEEEET
T ss_pred ccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE--EEEEEecCCccCCEEEEEECCCCC-EEEEEeC
Confidence 567789999999999999985 9999999999999999875321 12233 3 4999999999999998 7999999
Q ss_pred CCeEEEEECCCCC----cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-CCCCceEEcccCCCCEE
Q psy4510 341 DLSIRIWDTRVIN----TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-KKGSSVATFKHHTAPVT 415 (812)
Q Consensus 341 dg~i~iwd~~~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~h~~~v~ 415 (812)
|++|++||++... ...++..+ .+|...|++++|+|++++|++|+.|+.|++||++.. .....+..+.+|...|.
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred CCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 9999999986421 12234444 789999999999999999999999999999999532 12346778899999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
+++|+|++ .+|++++.|++|++||+..... .
T Consensus 158 ~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~---------------~--------------------------------- 188 (330)
T 2hes_X 158 HVIWHPSE-ALLASSSYDDTVRIWKDYDDDW---------------E--------------------------------- 188 (330)
T ss_dssp EEEECSSS-SEEEEEETTSCEEEEEEETTEE---------------E---------------------------------
T ss_pred EEEECCCC-CEEEEEcCCCeEEEEECCCCCe---------------e---------------------------------
Confidence 99999986 6999999999999999753300 0
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
T Consensus 189 -------------------------------------------------------------------------------- 188 (330)
T 2hes_X 189 -------------------------------------------------------------------------------- 188 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceEEecccceEEEEEEecc--CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQY--GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS 653 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~--g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (812)
....+.+|.+.|.+++|+|+ +.+++++ +.|++|++|++........ ....+...+.
T Consensus 189 ---~~~~~~~h~~~v~~~~~~~~~~~~~l~s~--s~D~~v~iw~~~~~~~~~~-----------------~~~~~~~~~~ 246 (330)
T 2hes_X 189 ---CVAVLNGHEGTVWSSDFDKTEGVFRLCSG--SDDSTVRVWKYMGDDEDDQ-----------------QEWVCEAILP 246 (330)
T ss_dssp ---EEEEECCCSSCEEEEEECCSSSSCEEEEE--ETTSCEEEEEEEEECTTSC-----------------EEEEEEEECC
T ss_pred ---EEEEccCCCCcEEEEEecCCCCeeEEEEE--eCCCeEEEEEecCCCcccc-----------------ceeEEeeecc
Confidence 01124456667888888888 5678887 8999999999976531100 0001344455
Q ss_pred C-CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccccc
Q psy4510 654 G-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 732 (812)
Q Consensus 654 g-h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~ 732 (812)
+ |...|++++|++ ++ +|++++.||+|+||+..++.. +.....+.
T Consensus 247 ~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~~~~~~---------------------------------~~~~~~~~ 291 (330)
T 2hes_X 247 DVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEEVDGEW---------------------------------KVFAKRAL 291 (330)
T ss_dssp SCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEEETTEE---------------------------------EEEEEESC
T ss_pred cccccceEEEEEcC-CC-EEEEEeCCCEEEEEEcCCCce---------------------------------EEEecccc
Confidence 5 899999999997 54 788888888888888632210 00112345
Q ss_pred CCCc-ceeEeEEec--CCceeEEeeccCCceEEeeecC
Q psy4510 733 GHTN-SVEDLQWSP--GEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 733 gH~~-~V~~l~fs~--dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+|.. .|++++|+| +++ +|||||.||+|+||+++.
T Consensus 292 ~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 292 CHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred ccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 7776 899999999 677 899999999999999865
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=335.19 Aligned_cols=311 Identities=20% Similarity=0.375 Sum_probs=248.2
Q ss_pred CccCcCCCCC-ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLT-EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~-~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.+..+.+|.+ .|++++|+| ++++||||+.|++|+||++.++... .......+|...|++++|+|++++|++++.|+.
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWI-CKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEE-EEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcce-eeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 4556668987 999999999 9999999999999999998775421 112234789999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
+++|++..+ ...++..+.+|...|.+++|+|++ .+|++|+.|++|++||+...... .....+.+|...|.+++
T Consensus 85 v~iw~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 85 TCIWKKNQD-----DFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEY-ECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEEEEECCC------EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCE-EEEEEECCCCSCEEEEE
T ss_pred EEEEEccCC-----CeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCe-EEEEEecCcCCCeEEEE
Confidence 999998774 234678899999999999999998 89999999999999999876532 13456788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-----
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----- 401 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----- 401 (812)
|+|++. +|++|+.|+.|++||++... ..+...+ .+|...|++++|+|++++|++|+.||.|+|||.+.....
T Consensus 158 ~~p~~~-~l~s~s~d~~i~~w~~~~~~-~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 158 WHPSQE-LLASASYDDTVKLYREEEDD-WVCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ECSSSS-CEEEEETTSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred ECCCCC-EEEEEeCCCcEEEEEecCCC-EEEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcccee
Confidence 999998 69999999999999987432 2234455 789999999999999999999999999999997532111
Q ss_pred -------CceEEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe--e-cCC
Q psy4510 402 -------SSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI--H-LGQ 470 (812)
Q Consensus 402 -------~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 470 (812)
..+..+.+ |...|.+++|+|++ ..|++++.|+.|++|+....... ..+...... + .+.
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~----------~~~~~~~~~~~~~~h~ 303 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDP----------QQPTFSLTAHLHQAHS 303 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCT----------TSCCEEEEEEETTSSS
T ss_pred eccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCc----------ceeeEEEEeeeccccc
Confidence 12334444 88999999999987 58999999999999998765321 011111111 1 344
Q ss_pred CceeEEEEcCCCCCEEEEEeCCCe-EEEEeCC
Q psy4510 471 KEIKELHWHPQLPGTIISTANSGF-NIFRTIS 501 (812)
Q Consensus 471 ~~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 501 (812)
..|.+++|+|+++.++++++.|+. .+|+...
T Consensus 304 ~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 304 QDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 589999999998888988888775 5555443
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-39 Score=335.11 Aligned_cols=265 Identities=24% Similarity=0.334 Sum_probs=208.9
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-C-CCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-G-GHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-~-~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+..+.+|.++|++++|+| + +||||+.|++|+||++..+... ....+ . +|...|++++|+|++++|++++.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFT--LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp EEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCE--EEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeE--EEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 4556679999999999999 6 9999999999999999875321 22333 3 4999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++|++...........++..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+............+.+|...|.++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 999999864311111234567889999999999999998 8999999999999999964432122356678899999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCC--
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKG-- 401 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~-- 401 (812)
+|+|++. +|++|+.|++|++||++... ..++..+ .+|...|.+++|+|+ +.+|++|+.|++|++||++.....
T Consensus 160 ~~~p~~~-~l~s~s~D~~i~iW~~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEA-LLASSSYDDTVRIWKDYDDD-WECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSS-EEEEEETTSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EECCCCC-EEEEEcCCCeEEEEECCCCC-eeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 9999998 69999999999999987431 2355555 789999999999998 669999999999999999742111
Q ss_pred ---CceEEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 402 ---SSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 402 ---~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
.....+.. |...|.+++|++.+ +|++++.||.|++||...
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET
T ss_pred ceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC
Confidence 23445554 89999999999753 799999999999999753
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=333.79 Aligned_cols=216 Identities=19% Similarity=0.311 Sum_probs=183.8
Q ss_pred cccccCCCCCCeeeeeE-----cC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEE
Q psy4510 215 DQKPLGGHTNSAEDLQW-----SD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~-----s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 288 (812)
....+.+|...|++++| ++ ++++|++|+.|++|++|++...........+...+.+|...|.+++|+|++ .+|
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEE
Confidence 45678899999999999 76 899999999999999999976421111124567789999999999999998 899
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
++|+.|++|++||+.++. ....+.+|...|.+++|+|+++ +|++++.|+.|++||++.. ..........|...
T Consensus 92 ~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGE--CKFSSAEKENHSDW 164 (343)
T ss_dssp EEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSC--EEEECCTTTSCSSC
T ss_pred EEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCC--ceeeeecccCCCce
Confidence 999999999999999887 5677889999999999999998 6999999999999999731 11111112478899
Q ss_pred eEEEEEcCCC----------CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 369 VNVISWNRTE----------PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 369 v~~l~~~~~~----------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
|.+++|+|++ .+|++|+.||.|++||. .......+.+|...|.+++|+|++ .+|++|+.|+.|++
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~----~~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT----NFQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLI 239 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET----TTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC----CCceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEE
Confidence 9999999987 69999999999999995 356677889999999999999997 69999999999999
Q ss_pred EEcCC
Q psy4510 439 WDLAV 443 (812)
Q Consensus 439 wd~~~ 443 (812)
||+..
T Consensus 240 wd~~~ 244 (343)
T 2xzm_R 240 WDILN 244 (343)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99853
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-38 Score=330.85 Aligned_cols=297 Identities=16% Similarity=0.252 Sum_probs=247.6
Q ss_pred CCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 165 ~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
..+....+.||.+.|++++|+| ++++||||+.||+|+|||..+.. ....+..|...|.+++|+|++++|++++.|
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTN----KEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred ccEEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCC----cceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 3456677889999999999999 99999999999999999988776 455677899999999999999999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.+++|++....... .......+.+|...|.+++|+|++ ..|++|+.|++|++||+.++. ....+.+|...|.+
T Consensus 128 ~~i~v~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~ 201 (354)
T 2pbi_B 128 NKCSVYPLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQ----LLQSFHGHGADVLC 201 (354)
T ss_dssp SEEEEEECCCCTTCC-SGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEE
T ss_pred CCEEEEEEecccccc-ccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCe----EEEEEcCCCCCeEE
Confidence 999999987642111 124556788999999999999998 799999999999999999887 56778899999999
Q ss_pred EEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 325 LQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 325 ~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
++|+|+. ..+|++|+.||.|++||+++ ..++..+ ..|...|++++|+|++++|++|+.|++|++||++. ...
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~---~~~ 274 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRS---GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA---DRE 274 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCC---CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcE
Confidence 9998853 23799999999999999984 4456666 78999999999999999999999999999999984 445
Q ss_pred eEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 404 VATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 404 ~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+..+.. +...+.+++|+|++ .+|++|+.|+.|++||+.... .+.....+...|.+++|+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~----------------~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 275 VAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGS----------------RVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS----------------EEEEECCCSSCEEEEEECTT
T ss_pred EEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCc----------------eEEEEECCCCcEEEEEECCC
Confidence 555543 34578999999997 699999999999999997763 23334455668999999999
Q ss_pred CCCEEEEEeCCC-eEEE
Q psy4510 482 LPGTIISTANSG-FNIF 497 (812)
Q Consensus 482 ~~~~~~~~~~~~-~~~~ 497 (812)
+. .+++++.++ +.+|
T Consensus 338 g~-~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 338 GT-AFCSGSWDHTLRVW 353 (354)
T ss_dssp SS-CEEEEETTSEEEEE
T ss_pred CC-EEEEEcCCCCEEec
Confidence 86 455555555 4554
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=356.43 Aligned_cols=343 Identities=13% Similarity=0.116 Sum_probs=240.7
Q ss_pred CCCCeeeeeEcCCC---------CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 222 HTNSAEDLQWSDLK---------TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 222 h~~~V~~l~~s~~~---------~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
+.+.|.+|+|+|++ ++||+++.++. . -..+|++ .+|++++
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~----------------~--------------~~~~~~~-~~laS~s 180 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM----------------D--------------EPLNEHL-EMFDKEK 180 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEeccc----------------C--------------Cccchhh-hhhccCC
Confidence 56789999999987 78888875421 0 0136887 7899999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-----CeEEEEEECCCeEEEEECCCCCcc--------ccee
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE-----KRVLASCSVDLSIRIWDTRVINTK--------SCML 359 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-----~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~ 359 (812)
.|++|+||++.++.........+.+|.+.|.+++|+|++ ..+||+++.||+|++||+...... .+..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 999999999977652111123456788999999999972 237999999999999999754321 1122
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE--EEccCCCcEEEEEECCCCEE
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV--EWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~~l~s~~~dg~v~ 437 (812)
.+ .+|...|++++|++++ .|++|+.||+|++||++. ...+...+.+|...|++| .|+|++..+|++++.|++|+
T Consensus 261 ~l-~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~--~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 261 TL-SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTD--PEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp EE-CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTB--CSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred EE-EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCC--CCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 34 6789999999999864 899999999999999985 234567788999999999 56776547999999999999
Q ss_pred EEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCe
Q psy4510 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEI 517 (812)
Q Consensus 438 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 517 (812)
+||++..+.. ..
T Consensus 337 lWD~~~~~~~--------------~~------------------------------------------------------ 348 (524)
T 2j04_B 337 IFNPKDIATT--------------KT------------------------------------------------------ 348 (524)
T ss_dssp EECGGGHHHH--------------CE------------------------------------------------------
T ss_pred EEECCCCCcc--------------cc------------------------------------------------------
Confidence 9998765210 00
Q ss_pred eEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEeccc--ceEEEEEE
Q psy4510 518 KELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHR--GCINRVRT 595 (812)
Q Consensus 518 ~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~ 595 (812)
+.+|. ..|.+++|
T Consensus 349 -----------------------------------------------------------------~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 349 -----------------------------------------------------------------TVSRFRGSNLVPVVY 363 (524)
T ss_dssp -----------------------------------------------------------------EEEECSCCSCCCEEE
T ss_pred -----------------------------------------------------------------cccccccCcccceEe
Confidence 00000 13566889
Q ss_pred eccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEec
Q psy4510 596 CQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 596 s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~ 675 (812)
+|+++.++++ +.|++|++||+.++. ++.++.+|.+.|++|+||| ++.+|++|
T Consensus 364 sp~~~~l~s~--~~d~tv~lwd~~~~~-------------------------~~~~l~gH~~~V~sva~Sp-~g~~l~Sg 415 (524)
T 2j04_B 364 CPQIYSYIYS--DGASSLRAVPSRAAF-------------------------AVHPLVSRETTITAIGVSR-LHPMVLAG 415 (524)
T ss_dssp ETTTTEEEEE--CSSSEEEEEETTCTT-------------------------CCEEEEECSSCEEEEECCS-SCCBCEEE
T ss_pred CCCcCeEEEe--CCCCcEEEEECcccc-------------------------cceeeecCCCceEEEEeCC-CCCeEEEE
Confidence 9999888887 889999999998875 5677889999999999999 78899999
Q ss_pred CCCceEEEEecCCCc--------------eeEEEEecCCCCEEEeecCCCeEEEeecC-CCCCcccccccccCCCcceeE
Q psy4510 676 DCKRNIHIWTPREAG--------------AWSVYLYTNRFGVLATGDCKRNIHIWTPR-EAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 676 s~Dg~v~iWd~~~~~--------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~-~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+.||+|++|++..+. .+-..+|+|+|+.+.. .. .+++|... ++. ++.++.+|...|.+
T Consensus 416 s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~----~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 416 SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDV----SKAKIDAHGINITC 488 (524)
T ss_dssp ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC-----------------CCCSCCC
T ss_pred ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCc----ceeeecCCCceEEE
Confidence 999999999986521 1113457888875532 22 23344333 233 56789999999999
Q ss_pred eEEecCC---ceeEEeeccCCceEEeeecCc
Q psy4510 741 LQWSPGE---KRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 741 l~fs~dg---~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
|+|+|++ . +||+|+.||+||||+++-.
T Consensus 489 Vafsp~~~~~~-~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 489 TKWNETSAGGK-CYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EEECCSTTTTT-EEEEECTTSEEEEEECSCC
T ss_pred EECCCCCCccH-HHHhhccCceEEEEEcccc
Confidence 9999995 5 7999999999999998754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-38 Score=336.71 Aligned_cols=315 Identities=24% Similarity=0.333 Sum_probs=241.4
Q ss_pred EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC--------
Q psy4510 201 IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-------- 272 (812)
Q Consensus 201 v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-------- 272 (812)
..+|+...............+|...|.+++|+|+|++|++++ ++.+++|++.++ ..+..+.+|.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g-------~~~~~l~~~~~~~~~~~~ 113 (393)
T 1erj_A 42 YILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG-------SLVARLSDDSAANKDPEN 113 (393)
T ss_dssp EEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC-------CEEEEECC----------
T ss_pred EEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC-------CEEEEecCcccccccccc
Confidence 446655444332222223336999999999999999999976 689999999875 4455555443
Q ss_pred ----------CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 273 ----------TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 273 ----------~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
..|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|.+++|+|++. .|++++.|+
T Consensus 114 ~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~ 187 (393)
T 1erj_A 114 LNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRK----IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDR 187 (393)
T ss_dssp -------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred ccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc----EEEEEccCCCCEEEEEEcCCCC-EEEEecCCC
Confidence 248999999999 899999999999999998876 5667889999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEc-------ccCCCCE
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-------KHHTAPV 414 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-------~~h~~~v 414 (812)
+|++||+++ ..+...+ .+...+.+++|+| ++++|++|+.||.|++||++. +..+..+ .+|...|
T Consensus 188 ~v~iwd~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~---~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 188 TVRIWDLRT---GQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET---GFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEEEETTT---TEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT---CCEEEEEC------CCCSSCE
T ss_pred cEEEEECCC---CeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC---CcEEEeecccccCCCCCCCCE
Confidence 999999984 3344444 3567899999999 788999999999999999984 5555554 5799999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
++++|+|++ .+|++++.|+.|++||+....... ... .
T Consensus 260 ~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~-----------------~~~----------~--------------- 296 (393)
T 1erj_A 260 YSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKS-----------------DSK----------T--------------- 296 (393)
T ss_dssp EEEEECTTS-SEEEEEETTSEEEEEEC-----------------------------------------------------
T ss_pred EEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcc-----------------ccc----------C---------------
Confidence 999999997 699999999999999997652100 000 0
Q ss_pred EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcccc
Q psy4510 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRR 574 (812)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (812)
+.
T Consensus 297 -----------------------------~~------------------------------------------------- 298 (393)
T 1erj_A 297 -----------------------------PN------------------------------------------------- 298 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------CC-------------------------------------------------
Confidence 00
Q ss_pred CCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC
Q psy4510 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 654 (812)
Q Consensus 575 ~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 654 (812)
...+...+.+|...|.+++|+|++.+|+++ +.||.|++||+.++. ++..+.+
T Consensus 299 -~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg--s~D~~v~iwd~~~~~-------------------------~~~~l~~ 350 (393)
T 1erj_A 299 -SGTCEVTYIGHKDFVLSVATTQNDEYILSG--SKDRGVLFWDKKSGN-------------------------PLLMLQG 350 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEE--ETTSEEEEEETTTCC-------------------------EEEEEEC
T ss_pred -CCcceEEEecccCcEEEEEECCCCCEEEEE--eCCCeEEEEECCCCe-------------------------EEEEECC
Confidence 000122456777889999999999999998 899999999998876 6788999
Q ss_pred CCCceEEEEeCCC-----CCCeEEecCCCceEEEEec
Q psy4510 655 HLTEGFAMDWSST-----EPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 655 h~~~V~~l~~sp~-----~~~~las~s~Dg~v~iWd~ 686 (812)
|.+.|.+++|++. ++.+||||+.||+|+||++
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999999872 2345555555555555554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=323.65 Aligned_cols=294 Identities=25% Similarity=0.431 Sum_probs=240.7
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
....++.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++. ....+.+|...|.+++|+|+++ +|++|+.||
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~ 87 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSN-LLVSASDDK 87 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred eeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCCC-EEEEECCCC
Confidence 4567789999999999999998 799999999999999998876 5667789999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.|++||+++ ..++..+ .+|...|.+++|+|++++|++|+.||.|++||++ .++.+..+..|..+|.+++|+|+
T Consensus 88 ~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 88 TLKIWDVSS---GKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK---TGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp EEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEECCC---CcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC---CCEEEEEecCCCCcEEEEEEcCC
Confidence 999999984 4455555 7899999999999999999999999999999998 46788899999999999999998
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+ .+|++++.|+.|++||+...+. +...
T Consensus 161 ~-~~l~~~~~d~~i~~wd~~~~~~-----------------~~~~----------------------------------- 187 (312)
T 4ery_A 161 G-SLIVSSSYDGLCRIWDTASGQC-----------------LKTL----------------------------------- 187 (312)
T ss_dssp S-SEEEEEETTSCEEEEETTTCCE-----------------EEEE-----------------------------------
T ss_pred C-CEEEEEeCCCcEEEEECCCCce-----------------eeEE-----------------------------------
Confidence 6 6999999999999999876521 0000
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
T Consensus 188 -------------------------------------------------------------------------------- 187 (312)
T 4ery_A 188 -------------------------------------------------------------------------------- 187 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEE-
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA- 661 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~- 661 (812)
...+...+..++|+|++++++++ +.||.|++||+.++. ++..+.+|...+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~-------------------------~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAA--TLDNTLKLWDYSKGK-------------------------CLKTYTGHKNEKYCI 240 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEE--ETTTEEEEEETTTTE-------------------------EEEEECSSCCSSSCC
T ss_pred eccCCCceEEEEECCCCCEEEEE--cCCCeEEEEECCCCc-------------------------EEEEEEecCCceEEE
Confidence 00112256778899999999998 899999999998876 56677777654322
Q ss_pred -EEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 662 -MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 662 -l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
..++ .+++.+|++|+.||.|++||+.+++ ++..+.+|.+.|.+
T Consensus 241 ~~~~~--------------------------------~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~ 284 (312)
T 4ery_A 241 FANFS--------------------------------VTGGKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVIS 284 (312)
T ss_dssp CEEEE--------------------------------CSSSCEEEECCTTSCEEEEETTTCC----EEEEECCCSSCEEE
T ss_pred EEEEE--------------------------------eCCCcEEEEECCCCEEEEEECCCch----hhhhhhccCCcEEE
Confidence 2222 2344556666666666666666665 46678899999999
Q ss_pred eEEecCCceeEEeec--cCCceEEeeec
Q psy4510 741 LQWSPGEKRVLASCS--VDRSNRIGARR 766 (812)
Q Consensus 741 l~fs~dg~~~L~s~s--~Dg~i~iWd~~ 766 (812)
++|+|+++ +|++++ .|++|++|+..
T Consensus 285 ~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 285 TACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred EeecCcCC-ceEEEEccCCccEEEecCC
Confidence 99999999 899886 69999999864
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=326.01 Aligned_cols=328 Identities=16% Similarity=0.188 Sum_probs=262.0
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
|..+|.+++|+|+|++++++..++.+.+|..... .......+|...|.+++|+|++ .+|++++ ||.|++|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH-------ARQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE-------EEEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc-------cccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEE
Confidence 4568999999999999999888877777755442 3334455899999999999998 7899998 99999999
Q ss_pred CCCCCccee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 302 PREAGAWQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 302 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
+.++..... ......+|...|.+++|+|+++ +|++++.||.|++||++.... .....+ ..|...|.+++|+|++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~-~~~~~~-~~~~~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTP-RIKAEL-TSSAPACYALAISPDSKV 155 (337)
T ss_dssp TTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC---EEEEEE-ECSSSCEEEEEECTTSSE
T ss_pred CCCCCceeeeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCc-ceeeec-ccCCCceEEEEECCCCCE
Confidence 987653111 1111227899999999999998 699999999999999985431 123344 678899999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLP 460 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 460 (812)
|++++.||.|++||++ .++.+..+..|...|.+++|+|++ .+|++++.|+.|++||+...+.
T Consensus 156 l~~~~~dg~v~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~-------------- 217 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQ-------------- 217 (337)
T ss_dssp EEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE--------------
T ss_pred EEEEeCCCcEEEEeCC---CCceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCce--------------
Confidence 9999999999999998 467788899999999999999986 6999999999999999876510
Q ss_pred CceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceE
Q psy4510 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540 (812)
Q Consensus 461 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~ 540 (812)
..
T Consensus 218 ---~~--------------------------------------------------------------------------- 219 (337)
T 1gxr_A 218 ---LQ--------------------------------------------------------------------------- 219 (337)
T ss_dssp ---EE---------------------------------------------------------------------------
T ss_pred ---Ee---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccc
Q psy4510 541 FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620 (812)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~ 620 (812)
...+...+.+++|+|++++++++ +.+|.|++|++.+
T Consensus 220 ------------------------------------------~~~~~~~v~~~~~s~~~~~l~~~--~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 220 ------------------------------------------QHDFTSQIFSLGYCPTGEWLAVG--MESSNVEVLHVNK 255 (337)
T ss_dssp ------------------------------------------EEECSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTS
T ss_pred ------------------------------------------eecCCCceEEEEECCCCCEEEEE--cCCCcEEEEECCC
Confidence 00112356778899999999988 7899999999987
Q ss_pred cccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCC
Q psy4510 621 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR 700 (812)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~d 700 (812)
.. ...+.+|...|.+++|+| ++++|++++.||.|++|++.+
T Consensus 256 ~~--------------------------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~------------ 296 (337)
T 1gxr_A 256 PD--------------------------KYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPY------------ 296 (337)
T ss_dssp SC--------------------------EEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT------------
T ss_pred CC--------------------------eEEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCC------------
Confidence 64 345778999999999999 676777777777776666543
Q ss_pred CCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 701 FGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 701 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
++. . ....|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 297 --------------------~~~----~-~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 297 --------------------GAS----I-FQSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp --------------------CCE----E-EEEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEEE
T ss_pred --------------------CeE----E-EEecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEEe
Confidence 331 1 2234678899999999999 89999999999999974
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=326.17 Aligned_cols=326 Identities=14% Similarity=0.184 Sum_probs=268.4
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
|.++|.+++|+| +|+++|++..++.+.+|...... ......+|...|++++|+|++++|++++ ++.|++|++.+
T Consensus 8 ~~~~v~~~~~s~-dg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTA-DGQMQPVPFPPDALIGPGIPRHA----RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECS-SSCEEECCCCTTSSSSTTCCSEE----EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTS
T ss_pred cCCceeEEEECC-CCCEEEeecCCCcEeccccCCcc----ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCC
Confidence 457899999999 99999999888877777554433 2333458999999999999999999999 99999999987
Q ss_pred CCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+. ...++..+. +|...|.+++|+|++ .+|++|+.||.|++|++.++.. .....+..|...|.+++|+|+++
T Consensus 82 ~~----~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 82 PG----NKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp TT----CCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECTTSS
T ss_pred CC----ceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc--ceeeecccCCCceEEEEECCCCC
Confidence 52 223444544 799999999999998 8999999999999999988752 12455678999999999999998
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
+|++++.||.|++||+++ ...+..+ ..|...|.+++|+|++++|++++.||.|++||++. ++.+..+ .|..
T Consensus 155 -~l~~~~~dg~v~~~d~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~-~~~~ 225 (337)
T 1gxr_A 155 -VCFSCCSDGNIAVWDLHN---QTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQH-DFTS 225 (337)
T ss_dssp -EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEE-ECSS
T ss_pred -EEEEEeCCCcEEEEeCCC---Cceeeee-ecccCceEEEEECCCCCEEEEEecCCcEEEEECCC---CceEeee-cCCC
Confidence 699999999999999984 3445555 67999999999999999999999999999999984 4555555 4788
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
.+.+++|+|++ .+|++++.++.|++||+.....
T Consensus 226 ~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~~---------------------------------------------- 258 (337)
T 1gxr_A 226 QIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDK---------------------------------------------- 258 (337)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEETTSSCE----------------------------------------------
T ss_pred ceEEEEECCCC-CEEEEEcCCCcEEEEECCCCCe----------------------------------------------
Confidence 99999999997 6999999999999999875410
Q ss_pred CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcc
Q psy4510 493 GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDED 572 (812)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 572 (812)
T Consensus 259 -------------------------------------------------------------------------------- 258 (337)
T 1gxr_A 259 -------------------------------------------------------------------------------- 258 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee
Q psy4510 573 RRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 652 (812)
Q Consensus 573 ~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (812)
..+..|...|.+++|+|++++++++ +.||.|++|++.++. .+ ..
T Consensus 259 --------~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~~~~~~~~~-------------------------~~-~~ 302 (337)
T 1gxr_A 259 --------YQLHLHESCVLSLKFAYCGKWFVST--GKDNLLNAWRTPYGA-------------------------SI-FQ 302 (337)
T ss_dssp --------EEECCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTCC-------------------------EE-EE
T ss_pred --------EEEcCCccceeEEEECCCCCEEEEe--cCCCcEEEEECCCCe-------------------------EE-EE
Confidence 0112234478889999999999988 889999999998875 23 23
Q ss_pred cCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 653 ~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
..|...|.+++|+| ++++|++++.||.|++|++
T Consensus 303 ~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 303 SKESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECSSCEEEEEECT-TSCEEEEEETTSCEEEEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEecCCCeEEEEEE
Confidence 45888999999999 7889999999999999986
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=320.87 Aligned_cols=292 Identities=20% Similarity=0.378 Sum_probs=246.1
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.....+.||.+.|++++|+| ++++||+|+.||.|+||++.+++ ....+.+|...|.+++|+|++++|++++.|+.
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeEEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCCCEEEEECCCCE
Confidence 34556679999999999999 99999999999999999998876 56678899999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.||.|++||+.++. ....+..|...|.+++
T Consensus 89 i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 89 LKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVH 156 (312)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCE----EEEEecCCCCcEEEEE
Confidence 999999875 7788999999999999999998 899999999999999999876 5667788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|++. +|++++.||.|++||+++ ..++..+...+...+.+++|+|++++|++++.||.|++||++ .++.+..
T Consensus 157 ~~~~~~-~l~~~~~d~~i~~wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~ 229 (312)
T 4ery_A 157 FNRDGS-LIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS---KGKCLKT 229 (312)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT---CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT---TTEEEEE
T ss_pred EcCCCC-EEEEEeCCCcEEEEECCC---CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC---CCcEEEE
Confidence 999998 699999999999999984 344555546677889999999999999999999999999998 4667888
Q ss_pred cccCCCCEE--EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 407 FKHHTAPVT--TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 407 ~~~h~~~v~--~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
+.+|...+. ...+++.+..+|++|+.||.|++||+.... .+.....+...|..++|+|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------------~~~~~~~h~~~v~~~~~~p~~~~ 293 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------------IVQKLQGHTDVVISTACHPTENI 293 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC----------------EEEEECCCSSCEEEEEECSSSSE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch----------------hhhhhhccCCcEEEEeecCcCCc
Confidence 888876543 234555455799999999999999998773 22233344568999999999865
Q ss_pred EEEEEe-CCC-eEEEE
Q psy4510 485 TIISTA-NSG-FNIFR 498 (812)
Q Consensus 485 ~~~~~~-~~~-~~~~~ 498 (812)
++.++. .++ +.+|+
T Consensus 294 l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 294 IASAALENDKTIKLWK 309 (312)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred eEEEEccCCccEEEec
Confidence 444432 344 55654
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=352.81 Aligned_cols=240 Identities=12% Similarity=0.073 Sum_probs=190.0
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC------CCcEEEeeCCCceEEeeCCCCCCCC----C
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL------KTALQTVDDPFQLAEHNKKRGKGPG----I 260 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~------~~~l~s~~~d~~i~vwd~~~~~~~~----~ 260 (812)
+||+|+.|++|+||++.+++........+.+|.+.|.+++|+|+ +.+||+++.|++|++|++..+.... .
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 34446688999999998765322223446778899999999997 5799999999999999998752110 1
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE--EEcCCCCeEEEEE
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL--QWSPGEKRVLASC 338 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~l~s~ 338 (812)
...+..++.+|...|.+++|+|+ ..|++|+.||+|++||+.++.. ....+.+|...|+++ +|+|++.++|+||
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 12456789999999999999986 5899999999999999987642 344578899999999 5678773489999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCC--CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHT--SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 416 (812)
+.|++|+|||+++ ..++..+ .+|. ..|.+++|+|+++.|++++.|++|++||++. ...+..+.+|.+.|++
T Consensus 330 S~D~tvklWD~~~---~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~---~~~~~~l~gH~~~V~s 402 (524)
T 2j04_B 330 AVDGYFYIFNPKD---IATTKTT-VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA---AFAVHPLVSRETTITA 402 (524)
T ss_dssp ETTSEEEEECGGG---HHHHCEE-EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC---TTCCEEEEECSSCEEE
T ss_pred ccCCeEEEEECCC---CCccccc-ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc---cccceeeecCCCceEE
Confidence 9999999999984 3333333 3443 3588999999999999999999999999984 5667788899999999
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
|+|+|++ .+|++|+.|++|++||+..
T Consensus 403 va~Sp~g-~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 403 IGVSRLH-PMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EECCSSC-CBCEEEETTTEEECCBSCS
T ss_pred EEeCCCC-CeEEEEECCCEEEEEechH
Confidence 9999997 5899999999999999754
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=323.51 Aligned_cols=309 Identities=21% Similarity=0.301 Sum_probs=244.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
....+|+||.+.|++|+|+|+++.+|+||+.||+|+|||+.+... .......+.+|...|.+++|+|+++ +|++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-FALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-EEEEEccc
Confidence 445679999999999999998668999999999999999987653 2234567889999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
+.|++|+.... ...... ..+...+..+.+++.+++|++|+.|+.+++||++. .........+|...+..++|++
T Consensus 108 ~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~--~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 108 GTLRLWDLTTG---TTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp SEEEEEETTTT---EEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS--CEEEEECSSSCSSCEEEEEECS
T ss_pred ccceEEeeccc---ceeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeCC--CceEEEEeccccCcccceEEcc
Confidence 99999999843 223333 56778899999999999999999999999999974 3344556778999999999998
Q ss_pred CCC-cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 422 TES-STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 422 ~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
++. .++++++.|+.|++||+...+.
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~------------------------------------------------------ 207 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKL------------------------------------------------------ 207 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEE------------------------------------------------------
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCce------------------------------------------------------
Confidence 753 4788999999999999876510
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccc
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMN 580 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (812)
.
T Consensus 208 -------------------------------------------------------------------------------~ 208 (340)
T 4aow_A 208 -------------------------------------------------------------------------------K 208 (340)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------e
Confidence 1
Q ss_pred eEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceE
Q psy4510 581 SYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 660 (812)
Q Consensus 581 ~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 660 (812)
..+.+|.+.|++++|+|++++|+++ +.||.|++||+.+.. ++..+.++ ..|.
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~--s~Dg~i~iwd~~~~~-------------------------~~~~~~~~-~~v~ 260 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASG--GKDGQAMLWDLNEGK-------------------------HLYTLDGG-DIIN 260 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEE--ETTCEEEEEETTTTE-------------------------EEEEEECS-SCEE
T ss_pred eEecCCCCcEEEEEECCCCCEEEEE--eCCCeEEEEEeccCc-------------------------eeeeecCC-ceEE
Confidence 1223455688899999999999998 899999999998876 45566544 5899
Q ss_pred EEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 661 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 661 ~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+++|+| ++ .+++++.|+.|++||+.++.... .+.... ......+|...|++
T Consensus 261 ~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~~-----------------------~~~~~~----~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 261 ALCFSP-NR-YWLCAATGPSIKIWDLEGKIIVD-----------------------ELKQEV----ISTSSKAEPPQCTS 311 (340)
T ss_dssp EEEECS-SS-SEEEEEETTEEEEEETTTTEEEE-----------------------EECCC-----------CCCCCEEE
T ss_pred eeecCC-CC-ceeeccCCCEEEEEECCCCeEEE-----------------------eccccc----eeeeccCCCCCEEE
Confidence 999999 55 56667789999999986543322 222111 23456789999999
Q ss_pred eEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 741 LQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 741 l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
|+|+|||+ +||||+.||+|+|||++.|.
T Consensus 312 l~~s~dg~-~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 312 LAWSADGQ-TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEEEEC--
T ss_pred EEECCCCC-EEEEEeCCCEEEEEeCCCcC
Confidence 99999999 89999999999999999874
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=321.90 Aligned_cols=328 Identities=20% Similarity=0.259 Sum_probs=242.1
Q ss_pred EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC
Q psy4510 194 TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272 (812)
Q Consensus 194 t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~ 272 (812)
+|-..|+..+|-............+|.||.+.|++|+|+|+ +++|+||+.|++|+|||+...... ...+...+.+|.
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~--~~~~~~~l~~h~ 86 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN--YGIPQRALRGHS 86 (340)
T ss_dssp -----------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC--SEEEEEEECCCS
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc--cceeeEEEeCCC
Confidence 34444554444323222222355679999999999999998 679999999999999999875210 123567889999
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..|.+++|+|++ .+|++|+.|+.|++|+..... .......+...+..+.+++++. +|++++.|+.+++||+...
T Consensus 87 ~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 87 HFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGT----TTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSC
T ss_pred CCEEEEEECCCC-CEEEEEcccccceEEeecccc----eeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCC
Confidence 999999999999 899999999999999998876 4555667888899999999998 5999999999999998742
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
........+|...+.+++|++++. ++++++.|+.|++||++ ..+.+..+.+|.++|++++|+|++ .+|++|
T Consensus 161 ---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~---~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~ 233 (340)
T 4aow_A 161 ---CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA---NCKLKTNHIGHTGYLNTVTVSPDG-SLCASG 233 (340)
T ss_dssp ---EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEE
T ss_pred ---ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC---CCceeeEecCCCCcEEEEEECCCC-CEEEEE
Confidence 223333478999999999998764 88999999999999998 567888999999999999999987 699999
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI 510 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (812)
+.|+.|++||+...+ .+...
T Consensus 234 s~Dg~i~iwd~~~~~-----------------~~~~~------------------------------------------- 253 (340)
T 4aow_A 234 GKDGQAMLWDLNEGK-----------------HLYTL------------------------------------------- 253 (340)
T ss_dssp ETTCEEEEEETTTTE-----------------EEEEE-------------------------------------------
T ss_pred eCCCeEEEEEeccCc-----------------eeeee-------------------------------------------
Confidence 999999999987652 11000
Q ss_pred ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceE
Q psy4510 511 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCI 590 (812)
Q Consensus 511 ~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 590 (812)
.+...+
T Consensus 254 --------------------------------------------------------------------------~~~~~v 259 (340)
T 4aow_A 254 --------------------------------------------------------------------------DGGDII 259 (340)
T ss_dssp --------------------------------------------------------------------------ECSSCE
T ss_pred --------------------------------------------------------------------------cCCceE
Confidence 001245
Q ss_pred EEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCC
Q psy4510 591 NRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670 (812)
Q Consensus 591 ~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~ 670 (812)
.+++|+|++. ++++ +.|+.|++||+.+........ .........+|...|++++|+| +++
T Consensus 260 ~~~~~~~~~~-~~~~--~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~~~~h~~~v~~l~~s~-dg~ 319 (340)
T 4aow_A 260 NALCFSPNRY-WLCA--ATGPSIKIWDLEGKIIVDELK----------------QEVISTSSKAEPPQCTSLAWSA-DGQ 319 (340)
T ss_dssp EEEEECSSSS-EEEE--EETTEEEEEETTTTEEEEEEC----------------CC-------CCCCCEEEEEECT-TSS
T ss_pred EeeecCCCCc-eeec--cCCCEEEEEECCCCeEEEecc----------------ccceeeeccCCCCCEEEEEECC-CCC
Confidence 6677777765 4444 568999999998764210000 0112334568999999999999 788
Q ss_pred eEEecCCCceEEEEecCCCc
Q psy4510 671 VLATGDCKRNIHIWTPREAG 690 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~ 690 (812)
+|++|+.||+|+|||+.+|.
T Consensus 320 ~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 320 TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEETTSCEEEEEEEC--
T ss_pred EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999987653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-37 Score=334.02 Aligned_cols=243 Identities=14% Similarity=0.183 Sum_probs=203.6
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+++++|+| ++++|++|+.||.|++||+.+.. ....+..| ..+...+|++++++|++++.++.|++|++.++
T Consensus 57 ~~~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~----~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~- 129 (420)
T 3vl1_A 57 DAGKGNTFEK-VGSHLYKARLDGHDFLFNTIIRD----GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN- 129 (420)
T ss_dssp BCCTTCEEEE-EETTEEEEEETTEEEEEECCSEE----TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-
T ss_pred ccccceeeee-cCCeEEEEEcCCcEEEEEecccc----eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-
Confidence 4455689999 99999999999999999998765 44555555 45556688999999999999999999999874
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.+...+.+|.+.|.+++|+|++ .+|++|+.|+.|++||+.++. ....+.+|...|.+++|+|+++ +|+
T Consensus 130 ------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~ 197 (420)
T 3vl1_A 130 ------LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS----NPRTLIGHRATVTDIAIIDRGR-NVL 197 (420)
T ss_dssp ------EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC----CCEEEECCSSCEEEEEEETTTT-EEE
T ss_pred ------ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc----CceEEcCCCCcEEEEEEcCCCC-EEE
Confidence 5666778999999999999998 799999999999999999887 5677889999999999999998 699
Q ss_pred EEECCCeEEEEECCCCCcccceeecC--CcCCCCe---------------------EEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLP--NAHTSDV---------------------NVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~v---------------------~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
+++.||.|++||++++. ++..+. ..|...| .+++|+|++++|++|+.||.|++|
T Consensus 198 s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEETTSCEEEEETTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEcCCCcEEEeECCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 99999999999998543 333331 2344444 445567889999999999999999
Q ss_pred ecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|++. +..+..+ ..|...|++++|+|++..+|++++.||.|++||++..
T Consensus 275 d~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 275 NVFS---KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp ETTT---CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred ECCC---CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9984 4444444 5688999999999998659999999999999999876
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=326.11 Aligned_cols=306 Identities=22% Similarity=0.326 Sum_probs=230.8
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC------------------CCCEEEEEEcCC
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH------------------TNSVEDLQWSPG 330 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h------------------~~~v~~~~~~p~ 330 (812)
.+|.+.|.+++|+|++ .+|++|+ ++.+++|++.++.. ...+..| ...|++++|+|+
T Consensus 61 ~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSL----VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp EECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCE----EEEECC-----------------CCCCBEEEEEECTT
T ss_pred cCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCE----EEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 3699999999999999 7888876 68999999988763 2333322 235999999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
++ +|++|+.||.|++||+.+ ...+..+ .+|...|.+++|+|++++|++|+.|+.|++||++. ++....+. +
T Consensus 135 g~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~-~ 205 (393)
T 1erj_A 135 GK-FLATGAEDRLIRIWDIEN---RKIVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLTLS-I 205 (393)
T ss_dssp SS-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEE-C
T ss_pred CC-EEEEEcCCCeEEEEECCC---CcEEEEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEEEE-c
Confidence 98 699999999999999984 3445555 78999999999999999999999999999999983 55555554 5
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+.+++|+|.++.+|++|+.|+.|++||+.+... .....
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~-----------------~~~~~---------------------- 246 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-----------------VERLD---------------------- 246 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-----------------EEEEC----------------------
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-----------------EEeec----------------------
Confidence 678999999995457999999999999999876521 00000
Q ss_pred CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCC
Q psy4510 491 NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGD 570 (812)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 570 (812)
.
T Consensus 247 ---------------------------------~---------------------------------------------- 247 (393)
T 1erj_A 247 ---------------------------------S---------------------------------------------- 247 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------c----------------------------------------------
Confidence 0
Q ss_pred ccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee
Q psy4510 571 EDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 650 (812)
Q Consensus 571 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (812)
......+|...|.+++|+|++++|+++ +.||.|++||+.......... ......+..
T Consensus 248 --------~~~~~~~h~~~v~~v~~~~~g~~l~s~--s~d~~v~~wd~~~~~~~~~~~-------------~~~~~~~~~ 304 (393)
T 1erj_A 248 --------ENESGTGHKDSVYSVVFTRDGQSVVSG--SLDRSVKLWNLQNANNKSDSK-------------TPNSGTCEV 304 (393)
T ss_dssp -------------CCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEEC----------------------------CEEE
T ss_pred --------cccCCCCCCCCEEEEEECCCCCEEEEE--eCCCEEEEEECCCCCCccccc-------------CCCCCcceE
Confidence 000123566789999999999999998 899999999998754211000 001123566
Q ss_pred eecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccc
Q psy4510 651 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP 730 (812)
Q Consensus 651 ~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~ 730 (812)
.+.+|...|.+++|+| ++.+|++|+.|++|++||+ .+++ .+..
T Consensus 305 ~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~--------------------------------~~~~----~~~~ 347 (393)
T 1erj_A 305 TYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDK--------------------------------KSGN----PLLM 347 (393)
T ss_dssp EEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEET--------------------------------TTCC----EEEE
T ss_pred EEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEEC--------------------------------CCCe----EEEE
Confidence 7889999999999999 5656666666655555554 4444 3456
Q ss_pred ccCCCcceeEeEEec------CCceeEEeeccCCceEEeeecCc
Q psy4510 731 LVGHTNSVEDLQWSP------GEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 731 ~~gH~~~V~~l~fs~------dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+.+|.+.|.+++|++ ++. +|||||.||+|+||+++..
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC
T ss_pred ECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccccc
Confidence 789999999999986 677 8999999999999998764
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=333.24 Aligned_cols=341 Identities=12% Similarity=0.126 Sum_probs=262.5
Q ss_pred EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc
Q psy4510 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT 354 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 354 (812)
+.+++|+|++ .+|++|+.||.|++|++.+.. ....+..| ..+....|+|+++ +|++|+.||.|++||++.
T Consensus 59 ~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~----~~~~~~~~-~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~--- 128 (420)
T 3vl1_A 59 GKGNTFEKVG-SHLYKARLDGHDFLFNTIIRD----GSKMLKRA-DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNF--- 128 (420)
T ss_dssp CTTCEEEEEE-TTEEEEEETTEEEEEECCSEE----TTTTSCSC-CEEEEEEECSSSC-EEEEEETTSCEEEECTTS---
T ss_pred ccceeeeecC-CeEEEEEcCCcEEEEEecccc----eeeEEecC-CceEEEEEecCCC-EEEEEECCCCEEEEeCCC---
Confidence 4478999999 789999999999999998765 34445555 4555667899998 699999999999999983
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
......+ ..|...|++++|+|++++|++|+.||.|++||++ .++.+..+.+|...|++++|+|++ .+|++++.|+
T Consensus 129 ~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~ 203 (420)
T 3vl1_A 129 NLQREID-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK---DGSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDG 203 (420)
T ss_dssp CEEEEET-TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT---TCCCCEEEECCSSCEEEEEEETTT-TEEEEEETTS
T ss_pred cceeeec-ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC---CCcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCC
Confidence 3344444 7899999999999999999999999999999998 466788899999999999999986 6999999999
Q ss_pred CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCC
Q psy4510 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQ 514 (812)
Q Consensus 435 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (812)
.|++||+.+.+ .......+. .+.
T Consensus 204 ~v~iwd~~~~~-----------------~~~~~~~~~----------------------------------------~~~ 226 (420)
T 3vl1_A 204 TIRLWECGTGT-----------------TIHTFNRKE----------------------------------------NPH 226 (420)
T ss_dssp CEEEEETTTTE-----------------EEEEECBTT----------------------------------------BTT
T ss_pred cEEEeECCCCc-----------------eeEEeecCC----------------------------------------CCC
Confidence 99999998763 111111000 011
Q ss_pred CCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEE
Q psy4510 515 KEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVR 594 (812)
Q Consensus 515 ~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 594 (812)
..+.++++.|..... ....+...+.+++
T Consensus 227 ~~v~~~~~~~~~~~~----------------------------------------------------~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQ----------------------------------------------------LHEISTSKKNNLE 254 (420)
T ss_dssp CCEEEEEEEECCCSS----------------------------------------------------CGGGCCCCCCTTC
T ss_pred CCccEEEEecCCcce----------------------------------------------------eeecccCcccceE
Confidence 234444444431100 1122344677889
Q ss_pred EeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCC-eEE
Q psy4510 595 TCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLA 673 (812)
Q Consensus 595 ~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~-~la 673 (812)
|+|++++++++ +.||.|++||+.++.. ......+|...|++++|+| ++. +|+
T Consensus 255 ~s~~~~~l~~~--~~dg~i~i~d~~~~~~------------------------~~~~~~~~~~~v~~~~~~~-~~~~~l~ 307 (420)
T 3vl1_A 255 FGTYGKYVIAG--HVSGVITVHNVFSKEQ------------------------TIQLPSKFTCSCNSLTVDG-NNANYIY 307 (420)
T ss_dssp SSCTTEEEEEE--ETTSCEEEEETTTCCE------------------------EEEECCTTSSCEEEEEECS-SCTTEEE
T ss_pred EcCCCCEEEEE--cCCCeEEEEECCCCce------------------------eEEcccccCCCceeEEEeC-CCCCEEE
Confidence 99999999998 8999999999988752 2333456889999999999 565 999
Q ss_pred ecCCCceEEEEecCCCce------------eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcc-----cccccccCCCc
Q psy4510 674 TGDCKRNIHIWTPREAGA------------WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQ-----VDQKPLVGHTN 736 (812)
Q Consensus 674 s~s~Dg~v~iWd~~~~~~------------~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~-----~~~~~~~gH~~ 736 (812)
+++.||.|++||+.+++. +..+ +.+++++|++|+.|++|++|++....... .....+.+|.+
T Consensus 308 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 999999999999987432 2333 45578999999999999999998743211 01234678889
Q ss_pred ceeEeEEecCCc---eeEEeeccCCceEEeeecCc
Q psy4510 737 SVEDLQWSPGEK---RVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 737 ~V~~l~fs~dg~---~~L~s~s~Dg~i~iWd~~~~ 768 (812)
.|.+++|+|+++ + |+++|.+|.+++|++.++
T Consensus 387 ~v~~~~~s~~~~~~g~-l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGE-VLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp CCCEEEEECCSSSSCE-EEEEETTTEEEEEESCC-
T ss_pred ceEEEEEccCCCCcce-EEEEcCCceEEEEeccCC
Confidence 999999999998 5 666777899999998763
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=318.22 Aligned_cols=309 Identities=19% Similarity=0.283 Sum_probs=237.0
Q ss_pred CCccCcCCCCCceEEEEe-----CCCCCCeEEEecCCCcEEEEccCCCCcc---cccccccCCCCCCeeeeeEcCCCCcE
Q psy4510 167 PPLFSFSGHLTEGFAMDW-----SSTEPGVLATGDCKRNIHIWTPREAGAW---QVDQKPLGGHTNSAEDLQWSDLKTAL 238 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~-----sp~~~~~lat~~~dg~v~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~l 238 (812)
..+..+.||.+.|++++| +|.++++||||+.|++|+|||+...+.. ......+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 445667799999999999 6658999999999999999999765421 22456788999999999999999999
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
++++.|++|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.|++|++||+.... ........+|
T Consensus 92 ~s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~ 161 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGEC--KFSSAEKENH 161 (343)
T ss_dssp EEEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCE--EEECCTTTSC
T ss_pred EEEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCc--eeeeecccCC
Confidence 99999999999999885 7788999999999999999998 799999999999999997432 1122334478
Q ss_pred CCCEEEEEEcCCCC---------eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy4510 319 TNSVEDLQWSPGEK---------RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389 (812)
Q Consensus 319 ~~~v~~~~~~p~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~ 389 (812)
...|.+++|+|++. .+|++++.||.|++||.+ ......+ .+|...|++++|+|++++|++|+.||.
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEE-cCccccceEEEECCCCCEEEEEcCCCe
Confidence 99999999999872 379999999999999954 2334444 689999999999999999999999999
Q ss_pred EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEE-eec
Q psy4510 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF-IHL 468 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 468 (812)
|++||++. ...+...+. +...|.+++|+|++ .+++ ++.|+.|++||+.+....... .....+..... ...
T Consensus 237 v~iwd~~~--~~~~~~~~~-~~~~v~~v~~sp~~-~~la-~~~d~~v~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 237 LLIWDILN--LTYPQREFD-AGSTINQIAFNPKL-QWVA-VGTDQGVKIFNLMTQSKAPVC----TIEAEPITKAEGQKG 307 (343)
T ss_dssp EEEEESSC--CSSCSEEEE-CSSCEEEEEECSSS-CEEE-EEESSCEEEEESSSCCSCSEE----ECCCCSGGGBTTBCC
T ss_pred EEEEECCC--Ccccceeec-CCCcEEEEEECCCC-CEEE-EECCCCEEEEEeCCCCCCceE----EeecCcchhhhhhcC
Confidence 99999964 233444443 55679999999986 4555 556888999999876421000 00000000000 012
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
+...|.+++|+|++..+++++.++.+.+|..
T Consensus 308 ~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp SCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 3346999999999876555444444566653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=338.21 Aligned_cols=315 Identities=15% Similarity=0.208 Sum_probs=240.1
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.......+|...|++|+|+|..+.+||+|+.||+|+|||+.++... ....+.+|.+.|++|+|+|.+..+|++|+.||
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 4445677899999999999977689999999999999999876531 23456789999999999995444799999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+|++||++... .. .......+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|++++|+|+
T Consensus 188 ~v~iwd~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~----~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 188 TTRLQDFKGNI-LR-VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD----GKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp CEEEEETTSCE-EE-EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS----SCBCCCSBCCSSCEEEEEECTT
T ss_pred EEEEeeccCCc-ee-EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC----cceeEEEecccceEEeeeecCC
Confidence 99999997421 11 111113445568899999999999999999999999996 4567788999999999999999
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+..+|++++.|+.|++||++......
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~------------------------------------------------------ 287 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKA------------------------------------------------------ 287 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSS------------------------------------------------------
T ss_pred CceEEEEecCcceeeEEecccccccc------------------------------------------------------
Confidence 88899999999999999997653100
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
....
T Consensus 288 ----------------------------------------------------------------------------~~~~ 291 (435)
T 4e54_B 288 ----------------------------------------------------------------------------SFLY 291 (435)
T ss_dssp ----------------------------------------------------------------------------CCSB
T ss_pred ----------------------------------------------------------------------------eEEE
Confidence 0001
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC-----
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT----- 657 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~----- 657 (812)
..+|...|++++|+|+|++|+++ +.||.|+|||+.++. +...+.+|..
T Consensus 292 ~~~h~~~v~~~~~spdg~~l~s~--~~D~~i~iwd~~~~~-------------------------~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 292 SLPHRHPVNAACFSPDGARLLTT--DQKSEIRVYSASQWD-------------------------CPLGLIPHPHRHFQH 344 (435)
T ss_dssp CCBCSSCEEECCBCTTSSEEEEE--ESSSCEEEEESSSSS-------------------------SEEEECCCCCCCCSS
T ss_pred eeeccccccceeECCCCCeeEEE--cCCCEEEEEECCCCc-------------------------cceEEeccccccccc
Confidence 23466689999999999999998 899999999998875 3333444432
Q ss_pred -ceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEE-eecCCCeEEEeecCCCCCcccccccccCCC
Q psy4510 658 -EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHT 735 (812)
Q Consensus 658 -~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~~gH~ 735 (812)
.+..+.|+| ++.++++++ ++++.+++ ++..++.|++||..+++. +.....+|.
T Consensus 345 ~~~~~~~~~~-~~~~~~~~~---------------------~~d~~~~~~~~~~~~~i~iwd~~~g~~---~~~l~~~~~ 399 (435)
T 4e54_B 345 LTPIKAAWHP-RYNLIVVGR---------------------YPDPNFKSCTPYELRTIDVFDGNSGKM---MCQLYDPES 399 (435)
T ss_dssp SCCCBCEECS-SSSCEEEEC---------------------CCCTTSCCSSTTCCCCEEEECSSSCCE---EEEECCSSC
T ss_pred ceeEEEEEcC-CCCEEEEEE---------------------cCCCCeEEEEecCCCEEEEEECCCCcE---EEEEeCCCC
Confidence 344567888 555655553 23344333 344567899999998874 223346788
Q ss_pred cceeEe-EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 736 NSVEDL-QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 736 ~~V~~l-~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
..|.++ +|+|+|+ +||+|+ |++|+||++++++
T Consensus 400 ~~v~s~~~fspdg~-~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 400 SGISSLNEFNPMGD-TLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCCCEEEECTTSS-CEEEEC-SSEEEECCCC---
T ss_pred CcEEEEEEECCCCC-EEEEEc-CCcEEEEECCcCe
Confidence 899998 6999999 798876 8899999999886
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-35 Score=322.59 Aligned_cols=323 Identities=20% Similarity=0.340 Sum_probs=268.9
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
....+.||.+.|.. ++++ ++++||+|+.||.|+|||+.+++ ....+.+|...|.+++|+ +++|++++.|+.|
T Consensus 110 ~~~~l~~h~~~v~~-~~~~-~g~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp CCEEEECSTTSCEE-EEEE-ETTEEEEEETTSCEEEEETTTCC----EEEECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred eeEEecccCCCcEE-EEEE-cCCEEEEEECCCcEEEEECCCCc----EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 34556689987543 3556 78999999999999999999887 667888999999999998 6799999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++||+.++ +++..+.+|...|.+++|++ ..|++|+.||+|++||+.++. ....+.+|...|.+++|
T Consensus 182 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 182 KVWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ----CLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC----EEEEEECCSSCEEEEEE
T ss_pred EEEECCcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCc----EEEEEcCCcccEEEEEE
Confidence 99999885 77889999999999999964 689999999999999999887 56677889999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
++. ++++|+.||.|++||+++ ..++..+ .+|...|.+++| ++.++++|+.||.|++||++ .++.+..+
T Consensus 248 --~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~---~~~~~~~~ 315 (445)
T 2ovr_B 248 --DGR-RVVSGAYDFMVKVWDPET---ETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE---TGNCIHTL 315 (445)
T ss_dssp --CSS-CEEEEETTSCEEEEEGGG---TEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT---TCCEEEEE
T ss_pred --CCC-EEEEEcCCCEEEEEECCC---CcEeEEe-cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC---CCCEEEEE
Confidence 455 599999999999999984 4456666 689999999999 68899999999999999998 57788999
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
.+|...+.++.+++ .+|++++.||.|++||+...+. ......
T Consensus 316 ~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~-----------------~~~~~~------------------ 357 (445)
T 2ovr_B 316 TGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQC-----------------LQTLQG------------------ 357 (445)
T ss_dssp CCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE-----------------EEEECS------------------
T ss_pred cCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcE-----------------EEEEcc------------------
Confidence 99999999998863 5899999999999999976521 000000
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
T Consensus 358 -------------------------------------------------------------------------------- 357 (445)
T 2ovr_B 358 -------------------------------------------------------------------------------- 357 (445)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
...|...|.+++|+ +++++++ +.||.|++||+.++.
T Consensus 358 ---------------~~~~~~~v~~~~~~--~~~l~s~--~~dg~v~iwd~~~~~------------------------- 393 (445)
T 2ovr_B 358 ---------------PNKHQSAVTCLQFN--KNFVITS--SDDGTVKLWDLKTGE------------------------- 393 (445)
T ss_dssp ---------------TTSCSSCEEEEEEC--SSEEEEE--ETTSEEEEEETTTCC-------------------------
T ss_pred ---------------CCCCCCCEEEEEEC--CCEEEEE--eCCCeEEEEECCCCc-------------------------
Confidence 01234467777774 5678888 899999999999876
Q ss_pred Ceeee-----cCCCCceEEEEeCCCCCCeEEecCCCce----EEEEecC
Q psy4510 648 PLFSF-----SGHLTEGFAMDWSSTEPGVLATGDCKRN----IHIWTPR 687 (812)
Q Consensus 648 ~~~~~-----~gh~~~V~~l~~sp~~~~~las~s~Dg~----v~iWd~~ 687 (812)
.+..+ .+|.+.|++++|+| ++.+||+|+.||+ |.+||+.
T Consensus 394 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 394 FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred eeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEECC
Confidence 44444 57889999999999 7889999999987 8888875
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-36 Score=307.46 Aligned_cols=263 Identities=16% Similarity=0.240 Sum_probs=217.7
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCc
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQ 246 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~ 246 (812)
+..+.||.+.|++++|+| +|++||||+.|++|+||++..... .....+.+|..+|.+++|+++ +++|++++.|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~--~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CEECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ceeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCc--EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 344569999999999999 999999999999999999975421 156788999999999999864 899999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
|++||+.++ ....+..+.+|...|.+++|+|+ + .+|++|+.|++|++||+...... ....+.+|...|.+
T Consensus 79 v~iWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~--~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 79 VMIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNS 150 (297)
T ss_dssp EEEEEBSSS-----CBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCB--CCEEEECCSSCEEE
T ss_pred EEEEEcCCC-----ceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCce--eeeeeecccCccce
Confidence 999999875 23567788999999999999997 5 79999999999999999876421 13456789999999
Q ss_pred EEEcCCC------------CeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCCC---CEEEEEeCCC
Q psy4510 325 LQWSPGE------------KRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRTE---PLIVSGGDDG 388 (812)
Q Consensus 325 ~~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~dg 388 (812)
++|+|++ ..+|++|+.|++|++||++...... ....+ .+|...|++++|+|++ ++|++|+.|+
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 9999973 2379999999999999998543221 33445 7899999999999985 6999999999
Q ss_pred cEEEEecCCCCCCCceEEc--ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATF--KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|+|||++..........+ ..|...|.+++|+|++ .+|++++.|+.|++|+....
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEECCC
Confidence 9999999752211122333 5688999999999997 68999999999999998644
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=319.45 Aligned_cols=307 Identities=17% Similarity=0.183 Sum_probs=242.1
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.....+.+|...|.+++|+|+++.+|++|+.||.|++||+.++... ......+|...|.+++|+|++..+|++++.|+
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT--SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE--EEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc--eeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 5567788999999999999998679999999999999999977631 12233479999999999995444799999999
Q ss_pred eEEEEECCCCCcccceeec--CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEc
Q psy4510 343 SIRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 420 (812)
.|++||++. ..+..+ ...|...|.+++|+|++++|++|+.||.|++||++ +.++..+..|...|.+++|+
T Consensus 142 ~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 142 ATTLRDFSG----SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEEETTS----CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEEC
T ss_pred EEEEEECCC----CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEEC
Confidence 999999984 222222 24456889999999999999999999999999994 56888999999999999999
Q ss_pred cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
|++..+|++++.|+.|++||++..... .
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------------------------~---------------- 241 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDK------------------------------------N---------------- 241 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCST------------------------------------T----------------
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcc------------------------------------c----------------
Confidence 998659999999999999999765210 0
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccc
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMN 580 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (812)
. .
T Consensus 242 ----------------------------~--------------------------------------------------~ 243 (383)
T 3ei3_B 242 ----------------------------S--------------------------------------------------Y 243 (383)
T ss_dssp ----------------------------C--------------------------------------------------E
T ss_pred ----------------------------c--------------------------------------------------e
Confidence 0 0
Q ss_pred eEEecccceEEEEEEec-cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec------
Q psy4510 581 SYFIRHRGCINRVRTCQ-YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS------ 653 (812)
Q Consensus 581 ~~~~~h~~~v~~l~~s~-~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 653 (812)
....+|...|.+++|+| ++++++++ +.||.|++||+.+... +..+.
T Consensus 244 ~~~~~~~~~v~~~~~s~~~~~~l~~~--~~d~~i~iwd~~~~~~-------------------------~~~~~~~~~~~ 296 (383)
T 3ei3_B 244 IAEMPHEKPVNAAYFNPTDSTKLLTT--DQRNEIRVYSSYDWSK-------------------------PDQIIIHPHRQ 296 (383)
T ss_dssp EEEEECSSCEEEEEECTTTSCEEEEE--ESSSEEEEEETTBTTS-------------------------CSEEEECCBCC
T ss_pred EEEecCCCceEEEEEcCCCCCEEEEE--cCCCcEEEEECCCCcc-------------------------ccccccccccc
Confidence 01113556889999999 99999998 8899999999988752 22222
Q ss_pred -CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccccc
Q psy4510 654 -GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 732 (812)
Q Consensus 654 -gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~ 732 (812)
.|...+. ++|+| ++..++ ++++|++++ +|+.|+.|++||+.+++ ++..+.
T Consensus 297 ~~~~~~~~-~~~~p-~~~~~~---------------------~~~s~dg~~--s~s~d~~i~iwd~~~~~----~~~~l~ 347 (383)
T 3ei3_B 297 FQHLTPIK-ATWHP-MYDLIV---------------------AGRYPDDQL--LLNDKRTIDIYDANSGG----LVHQLR 347 (383)
T ss_dssp CTTSCCCC-CEECS-SSSEEE---------------------EECBCCTTT--CTTCCCCEEEEETTTCC----EEEEEC
T ss_pred cccccceE-EeccC-CCCceE---------------------EEecCCccc--ccCCCCeEEEEecCCCc----eeeeec
Confidence 3444444 47777 443333 235777877 88889999999988887 455666
Q ss_pred C--CCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 733 G--HTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 733 g--H~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+ |...+.+++|+|+|+ +|++|+ |++|+|||+++
T Consensus 348 ~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 348 DPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp BTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred CCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 6 567788889999999 899997 99999999875
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=322.52 Aligned_cols=326 Identities=20% Similarity=0.312 Sum_probs=261.5
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|.+.|.. ++++++++|++|+.||.|++||+.++ +.+..+.+|.+.|.+++|++ .+|++|+.||
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg 179 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMRD---NIIISGSTDR 179 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEET---TEEEEEETTS
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEecC---CEEEEEeCCC
Confidence 4567889987643 24456899999999999999999885 77889999999999999983 6999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|++||+.++. ....+.+|...|.+++|++ + .+++|+.||.|++||+++ ..++..+ ..|...|.+++|
T Consensus 180 ~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~---~~~~~~~-~~~~~~v~~~~~- 247 (445)
T 2ovr_B 180 TLKVWNAETGE----CIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIET---GQCLHVL-MGHVAAVRCVQY- 247 (445)
T ss_dssp CEEEEETTTTE----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSS---CCEEEEE-ECCSSCEEEEEE-
T ss_pred eEEEEECCcCc----EEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCC---CcEEEEE-cCCcccEEEEEE-
Confidence 99999999886 5677889999999999963 4 699999999999999984 4445555 689999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
+++++++|+.||.|++||++ .+..+..+.+|...|.++.| ++ .++++++.|+.|++||+.+.+.
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~--------- 311 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNC--------- 311 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCE---------
T ss_pred -CCCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCE---------
Confidence 67899999999999999998 46788899999999999999 33 6899999999999999976521
Q ss_pred hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
..
T Consensus 312 --------~~---------------------------------------------------------------------- 313 (445)
T 2ovr_B 312 --------IH---------------------------------------------------------------------- 313 (445)
T ss_dssp --------EE----------------------------------------------------------------------
T ss_pred --------EE----------------------------------------------------------------------
Confidence 00
Q ss_pred CCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEE
Q psy4510 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGI 615 (812)
Q Consensus 536 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~i 615 (812)
.+.+|...+.++.+ ++++++++ +.||.|++
T Consensus 314 ----------------------------------------------~~~~~~~~v~~~~~--~~~~l~~~--~~dg~i~v 343 (445)
T 2ovr_B 314 ----------------------------------------------TLTGHQSLTSGMEL--KDNILVSG--NADSTVKI 343 (445)
T ss_dssp ----------------------------------------------EECCCCSCEEEEEE--ETTEEEEE--ETTSCEEE
T ss_pred ----------------------------------------------EEcCCcccEEEEEE--eCCEEEEE--eCCCeEEE
Confidence 01112223444443 46678888 89999999
Q ss_pred EeccccccccCCcccccccccccCCCCCCCCCCeeeecC---CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCcee
Q psy4510 616 WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG---HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 692 (812)
Q Consensus 616 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~ 692 (812)
||+.++. ++..+.+ |...|++++|++ .+|++++.||.|++||+.+++..
T Consensus 344 wd~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 344 WDIKTGQ-------------------------CLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EETTTCC-------------------------EEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCc-------------------------EEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCcee
Confidence 9998876 5666665 888999999965 47888888877777777654433
Q ss_pred EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCc----eEEeeecCc
Q psy4510 693 SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS----NRIGARRDM 768 (812)
Q Consensus 693 ~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~----i~iWd~~~~ 768 (812)
.... .....+|.+.|++++|+|++. +||+|+.||+ |.|||++..
T Consensus 396 ~~~~-------------------------------~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 396 RNLV-------------------------------TLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEE-------------------------------ECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred eeee-------------------------------ccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 3221 001246788999999999999 8999999998 999999864
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=324.69 Aligned_cols=322 Identities=13% Similarity=0.129 Sum_probs=252.4
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.-..+|.+++|||||+++|+++.|++|+ +...+ ..+.+|...|++++|+|+| .++.+.+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~----------~~l~gh~~~v~~V~FsPdg--------~~~~~~~~ 72 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA----------KDINCNSKNLFHVKEFPLE--------FENKLDFE 72 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC----------SCCSSBGGGTEEEEEECCC--------CCCTTTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc----------ceecCCCccEEEEEECCCC--------CcceEEEE
Confidence 4458999999999999999999999999 64432 2347999999999999997 45666666
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC-----CeEEEEEc
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-----DVNVISWN 375 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~v~~l~~~ 375 (812)
+..... ...+ .|...|.+++|+|+|. .||+++.||.|++||... ++..+ . |.. .|.+++|+
T Consensus 73 ~~~~~~-----~~~~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~-----~l~~l-~-~~~~~~~~sv~svafS 138 (588)
T 2j04_A 73 LAQQNG-----LLNS-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK-----MLTNL-D-SKGNLSSRTYHCFEWN 138 (588)
T ss_dssp CCCSSC-----SSTT-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE-----EEEEC-C-CSSCSTTTCEEEEEEC
T ss_pred eCCCce-----Eeec-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc-----eeeec-c-CCCccccccEEEEEEc
Confidence 543222 2222 4588999999999999 599999999999999642 44444 4 554 59999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCC----ceEEc----ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGS----SVATF----KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~----~~~~~----~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
|+|++||+|+.||+|+|||+....... .+.++ .+|...|.+++|+|++ +++++.|+.|++||+......
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc
Confidence 999999999999999999998521111 25665 6788899999999985 888999999999998765210
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLP 527 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 527 (812)
T Consensus 216 -------------------------------------------------------------------------------- 215 (588)
T 2j04_A 216 -------------------------------------------------------------------------------- 215 (588)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEE-ecccceEEEEEEeccCCeEEEEe
Q psy4510 528 GTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYF-IRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 528 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
.....+ .+|...|.+++|+ |+.++++
T Consensus 216 --------------------------------------------------~~~~tL~~~h~~~V~svaFs--g~~LASa- 242 (588)
T 2j04_A 216 --------------------------------------------------PVSRMIQNASRRKITDLKIV--DYKVVLT- 242 (588)
T ss_dssp --------------------------------------------------CCEEEEECCCSSCCCCEEEE--TTEEEEE-
T ss_pred --------------------------------------------------cceeeecccccCcEEEEEEE--CCEEEEE-
Confidence 000112 2455678888998 6788887
Q ss_pred ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEe--CCCCCCeEEecCCCceEEEE
Q psy4510 607 WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW--SSTEPGVLATGDCKRNIHIW 684 (812)
Q Consensus 607 ~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~--sp~~~~~las~s~Dg~v~iW 684 (812)
+ +++|++|++.++. ......||.+.|.+++| +| ++..|++++.||+ ++|
T Consensus 243 -~-~~tIkLWd~~~~~-------------------------~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw 293 (588)
T 2j04_A 243 -C-PGYVHKIDLKNYS-------------------------ISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVL 293 (588)
T ss_dssp -C-SSEEEEEETTTTE-------------------------EEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEE
T ss_pred -e-CCeEEEEECCCCe-------------------------EEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEE
Confidence 4 6999999999876 22223389999999999 99 7889999999999 999
Q ss_pred ecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeecc
Q psy4510 685 TPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756 (812)
Q Consensus 685 d~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~ 756 (812)
.... ..++||+..+|+. |+++++|+...+. ...+.+ ...|.+++|||||+ +||+++.
T Consensus 294 ~~d~------~~~spd~~l~a~~--d~~v~lW~~~g~~-----l~~~~~-~~~I~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 294 LEDE------LHVTADNIIAPYL--EKKFKKWSTIWNE-----FNNYET-TLVIHGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp ESSS------EEEECCCSSHHHH--HHHHHHTTTTTTS-----SSSSCC-EEEEEEEEECTTSS-EEEEEEE
T ss_pred eecc------EEECCCceEEEEc--CCEEEEEECCCCc-----eeeecc-ceEEEEEEECCCCC-EEEEEEe
Confidence 9882 3489999999886 9999999975543 345555 78899999999999 7998873
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=330.13 Aligned_cols=376 Identities=12% Similarity=0.118 Sum_probs=261.0
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-CCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~ 260 (812)
.|+| ++..+++++ .|+... + ....+ .+|.+.|++++|+| ++++|++|+.|+.|++|++.+.....
T Consensus 34 ~f~~-~~~~~~~~~------~w~~~g-~----~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~- 100 (437)
T 3gre_A 34 EFGP-IQEIVRSPN------MGNLRG-K----LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE- 100 (437)
T ss_dssp GGCC-CCCCCCCCC------GGGCCC-C----EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-
T ss_pred hcCC-ccccccccc------cccccc-e----EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-
Confidence 4778 888888776 377443 2 45556 89999999999999 99999999999999999987611000
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC---CCCccee------ccccccC--CCCCEEEEE--E
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR---EAGAWQV------DQKPLVG--HTNSVEDLQ--W 327 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~---~~~~~~~------~~~~~~~--h~~~v~~~~--~ 327 (812)
..++...+ +|.+.|.+++|+|++ .+|++|+.||.|++||+. .+..... ....+.. +...+.++. +
T Consensus 101 ~~~~~~~~-~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 101 VYSSSLTY-DCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CCSCSEEE-ECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred ccceeeec-cCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 12334444 599999999999988 899999999999999995 3321100 0111112 566777777 5
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
++++. +|++++.||.|++||+++ ..++..+ .. |...|++++|+|++++|++|+.||.|++||++ .+.++.
T Consensus 179 ~~~~~-~l~~~~~d~~i~iwd~~~---~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~---~~~~~~ 250 (437)
T 3gre_A 179 NEEKS-LLVALTNLSRVIIFDIRT---LERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR---FNVLIR 250 (437)
T ss_dssp CSSCE-EEEEEETTSEEEEEETTT---CCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEE
T ss_pred cCCCC-EEEEEeCCCeEEEEeCCC---CeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC---CccEEE
Confidence 67777 799999999999999984 4445555 34 88999999999999999999999999999998 467777
Q ss_pred Ecc-cCCCCEEEEEEccC---CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 406 TFK-HHTAPVTTVEWHPT---ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 406 ~~~-~h~~~v~~v~~~p~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.+. .|..+|++++|+|. +..+|++++.|+.|++||+...+. +.....+..
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----------------~~~~~~~~~---------- 304 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC----------------QYAFINSDE---------- 304 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE----------------EEEEESSSS----------
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE----------------EEEEEcCCC----------
Confidence 775 78889999977763 235999999999999999987631 111111111
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccc
Q psy4510 482 LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELE 561 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 561 (812)
.+..+.|+|+...+
T Consensus 305 ----------------------------------~~~~~~~~~~~~~l-------------------------------- 318 (437)
T 3gre_A 305 ----------------------------------QPSMEHFLPIEKGL-------------------------------- 318 (437)
T ss_dssp ----------------------------------CCCGGGGSCBCSSG--------------------------------
T ss_pred ----------------------------------CCccceeccccccc--------------------------------
Confidence 22222333331100
Q ss_pred cccCCCCCCccccCCCccceEEe--cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 562 DDESEGSGDEDRRKDPVMNSYFI--RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
....+. .|...|.+++|+ ++++|+++ +.||.|++||+.++.
T Consensus 319 -----------------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~--~~d~~i~~wd~~~~~----------------- 361 (437)
T 3gre_A 319 -----------------EELNFCGIRSLNALSTISVS-NDKILLTD--EATSSIVMFSLNELS----------------- 361 (437)
T ss_dssp -----------------GGCCCCCCCSGGGGCCEEEE-TTEEEEEE--GGGTEEEEEETTCGG-----------------
T ss_pred -----------------ccceecccccCCceEEEEEC-CceEEEec--CCCCeEEEEECCCcc-----------------
Confidence 000122 377889999999 77888888 899999999999886
Q ss_pred CCCCCCCCCeeeecCCCC---ceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEe
Q psy4510 640 KGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIW 716 (812)
Q Consensus 640 ~~~~~~~~~~~~~~gh~~---~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iw 716 (812)
++..+.+|.. ......+++ ...+++.. |
T Consensus 362 --------~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~--------~ 392 (437)
T 3gre_A 362 --------SSKAVISPSRFSDVFIPTQVTA---------------------------------NLTMLLRK--------M 392 (437)
T ss_dssp --------GCEEEECC--CCCEEEEEEEET---------------------------------TEEEEEEE--------C
T ss_pred --------cceEEecccccCceEEEEEeec---------------------------------ceEEEEEe--------c
Confidence 5666777643 233333333 12222222 2
Q ss_pred ecCCCCCcccccccccCCCcceeEeEEecC--CceeEEeeccCCceEEee
Q psy4510 717 TPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 717 d~~~~~~~~~~~~~~~gH~~~V~~l~fs~d--g~~~L~s~s~Dg~i~iWd 764 (812)
+..... ....+..|.+.|++++|+++ +. +|+||+.||+|+||+
T Consensus 393 ~~~~~~----~~~~~~~h~~~I~~i~~~~~~~~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 393 KRTSTH----SVDDSLYHHDIINSISTCEVDETP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp C-----------------CCCEEEEEEEESSSSE-EEEEEETTSCEEEEC
T ss_pred cccccc----ccCcccccccceeeEeeeccCCce-EEEEEcCCceEEEeC
Confidence 222222 23456779999999999998 66 899999999999995
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=340.64 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=216.7
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
..+.+|.+.|++++|+|.++++||||+.||+|+||++.+.... ......+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3567999999999999956789999999999999999875432 224567889999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||+.++ ..+..+.+|...|.+++|+|++ .+|++|+.|++|++||+..... ........+|...|.+++|+
T Consensus 456 vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 456 LWDLAAG-------VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEETTTT-------EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEEC
T ss_pred EEECCCC-------cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEe
Confidence 9999885 6778899999999999999998 7999999999999999865432 11233446799999999999
Q ss_pred CCCC-eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 329 PGEK-RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 329 p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
|++. .+|++|+.|++|++||++. ..+...+ .+|...|++++|+|++++|++|+.||.|++||++ .++.+..+
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~---~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~---~~~~~~~~ 599 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSN---CKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA---EGKKLYSL 599 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT---TTEEEECC
T ss_pred CCCCcceEEEEeCCCeEEEEECCC---CcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC---CCceEEEe
Confidence 9873 3799999999999999984 3445555 7899999999999999999999999999999998 45666666
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
. +...|.+++|+|++ .+|++++ ++.|++||+...
T Consensus 600 ~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 600 E-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp B-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTT
T ss_pred c-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCC
Confidence 5 45689999999986 4666555 667999999876
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-34 Score=319.42 Aligned_cols=317 Identities=20% Similarity=0.352 Sum_probs=259.5
Q ss_pred CCceEEcCCCCcE-EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v-~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.+...+.+|...+ .++.++ + .+|++|+.||+|++||+.++. ....+.+|.+.|.+++|+|++ +|++|+.|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~----~~~~~~~h~~~V~~l~~~~~~--~l~s~s~d 182 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHGG--ILVSGSTD 182 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSTT--EEEEEETT
T ss_pred cceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCc----EEEEEeCCCcCEEEEEEcCCC--EEEEEeCC
Confidence 4556889999875 666664 4 699999999999999999886 567788999999999999987 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEecCCCCCCC-----------------
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN--RTEPLIVSGGDDGCIHVWDLRRFKKGS----------------- 402 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~----------------- 402 (812)
|+|++||+++ ..++..+ .+|...|.+++|+ ++++++++|+.||.|++||++......
T Consensus 183 g~i~vwd~~~---~~~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 183 RTVRVWDIKK---GCCTHVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp SCEEEEETTT---TEEEEEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred CCEEEEECCC---CcEEEEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 9999999984 4455666 7899999999998 567799999999999999998532111
Q ss_pred ---ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc
Q psy4510 403 ---SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479 (812)
Q Consensus 403 ---~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 479 (812)
.+..+.+|...|.++. +++ .+|++++.|+.|++||+.+.+ .
T Consensus 259 ~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~-----------------~---------------- 302 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMK-----------------C---------------- 302 (464)
T ss_dssp CTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTE-----------------E----------------
T ss_pred CeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCc-----------------E----------------
Confidence 2567788999998885 444 589999999999999987551 0
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 480 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
T Consensus 303 -------------------------------------------------------------------------------- 302 (464)
T 3v7d_B 303 -------------------------------------------------------------------------------- 302 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
...+.+|...|.+++|+|++++++++ +.||.|++||+.++.
T Consensus 303 --------------------~~~~~~~~~~v~~~~~~~~~~~l~sg--~~dg~i~vwd~~~~~----------------- 343 (464)
T 3v7d_B 303 --------------------LYILSGHTDRIYSTIYDHERKRCISA--SMDTTIRIWDLENGE----------------- 343 (464)
T ss_dssp --------------------EEEECCCSSCEEEEEEETTTTEEEEE--ETTSCEEEEETTTTE-----------------
T ss_pred --------------------EEEecCCCCCEEEEEEcCCCCEEEEE--eCCCcEEEEECCCCc-----------------
Confidence 00123345578899999999999998 899999999999876
Q ss_pred CCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------eEEEEecCCCCEEEeecCC
Q psy4510 640 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------WSVYLYTNRFGVLATGDCK 710 (812)
Q Consensus 640 ~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------~~~~~~s~dg~~lasgs~d 710 (812)
++..+.+|...|.+++|++ .+|++++.||+|++||+.++.. ....++++++++|++|+ |
T Consensus 344 --------~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d 411 (464)
T 3v7d_B 344 --------LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E 411 (464)
T ss_dssp --------EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T
T ss_pred --------EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C
Confidence 7888999999999999975 5999999999999999998433 34567899999999999 8
Q ss_pred CeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 711 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 711 g~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
|.|++||+.+++. +...+.+|...|++++|+ +++++++++.||.+.+|-
T Consensus 412 g~i~iwd~~~g~~---~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 412 NQFNIYNLRSGKL---VHANILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TEEEEEETTTCCE---EESCTTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEE
T ss_pred CeEEEEECCCCcE---EehhhccCCCcEEEEEec--CCEEEEEEEeCCeEEEEE
Confidence 9999999999884 333478899999999997 443677777787665553
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=322.01 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=213.0
Q ss_pred CccCcCCCCCce-EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i-~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....+.||.+.| .++.+ ++++||+|+.||+|++||+.+++ ....+.+|...|.+++|++++ +|++++.|+.
T Consensus 113 ~~~~l~~h~~~v~~~~~~---~~~~l~sgs~dg~i~vwd~~~~~----~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEEEECCSSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred ceEEEcCCCCCcEEEEEE---CCCEEEEEcCCCcEEEEECCCCc----EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 344566898885 55555 56799999999999999998876 667788999999999999988 8999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCccee--------------
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQV-------------- 310 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~~~-------------- 310 (812)
|++||+.++ +++..+.+|.+.|.+++|++ ++ .+|++|+.||+|++||+.+......
T Consensus 185 i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 185 VRVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp EEEEETTTT-------EEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred EEEEECCCC-------cEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 999999885 77889999999999999995 54 7899999999999999987653111
Q ss_pred -----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 311 -----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 311 -----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
....+.+|...|.++ ++++. ++++++.||.|++||+++ ..++..+ .+|...|.+++|+|+++++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQ---MKCLYIL-SGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCC---CcEEEEe-cCCCCCEEEEEEcCCCCEEEEEe
Confidence 133567888888887 45666 699999999999999984 4556666 78999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.||.|++||++ .++.+..+.+|...|.++.|++ .+|++++.||.|++||+...
T Consensus 330 ~dg~i~vwd~~---~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 330 MDTTIRIWDLE---NGELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp TTSCEEEEETT---TTEEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTC
T ss_pred CCCcEEEEECC---CCcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCC
Confidence 99999999998 5778999999999999999984 58999999999999998765
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=307.60 Aligned_cols=311 Identities=14% Similarity=0.179 Sum_probs=252.0
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.....+.+|.+.|.+++|+|++ .+|++|+.||.|++||+.++. ....+.+|...|.+++|+|+++ +|++++.||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE----RLGTLDGHTGTIWSIDVDCFTK-YCVTGSADY 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS-EEEEEETTT
T ss_pred cccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch----hhhhhhhcCCcEEEEEEcCCCC-EEEEEeCCC
Confidence 3446689999999999999998 799999999999999999887 5677889999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCC--------CceEEccc
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKG--------SSVATFKH 409 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~--------~~~~~~~~ 409 (812)
.|++||+++ ..++..+ .+...|.+++|+|++++|++++.+ |.|++||++..... ..+..+..
T Consensus 97 ~i~iwd~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 171 (369)
T 3zwl_B 97 SIKLWDVSN---GQCVATW--KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT 171 (369)
T ss_dssp EEEEEETTT---CCEEEEE--ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC
T ss_pred eEEEEECCC---CcEEEEe--ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC
Confidence 999999984 4445555 278899999999999999999999 99999999853221 24455566
Q ss_pred CCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 410 HTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 410 h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
|.. .+.+++|+|++ .+|++++.||.|++||+..... .
T Consensus 172 ~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~----------------~------------------------ 210 (369)
T 3zwl_B 172 HEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYE----------------Y------------------------ 210 (369)
T ss_dssp CTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTE----------------E------------------------
T ss_pred CcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcE----------------e------------------------
Confidence 666 99999999987 6999999999999999875310 0
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
T Consensus 211 -------------------------------------------------------------------------------- 210 (369)
T 3zwl_B 211 -------------------------------------------------------------------------------- 210 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
...+..|...|.+++|+|++++++++ +.||.|++||+.+..
T Consensus 211 ------------~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~------------------------- 251 (369)
T 3zwl_B 211 ------------VDSIDLHEKSISDMQFSPDLTYFITS--SRDTNSFLVDVSTLQ------------------------- 251 (369)
T ss_dssp ------------EEEEECCSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTCC-------------------------
T ss_pred ------------EEEEecCCCceeEEEECCCCCEEEEe--cCCceEEEEECCCCc-------------------------
Confidence 01122344578889999999999998 899999999998875
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccc
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVD 727 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~ 727 (812)
++..+. +...+.+++|+| ++.++++++.++.+.+|... .......+++|+..+++ .
T Consensus 252 ~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~------------------~~~~~~~i~~~d~~~~~----~ 307 (369)
T 3zwl_B 252 VLKKYE-TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTS------------------ANEGKFEARFYHKIFEE----E 307 (369)
T ss_dssp EEEEEE-CSSCEEEEEECS-SSSEEEEEECCC-------------------------------CEEEEEETTTCC----E
T ss_pred eeeeec-CCCCceeEEecC-CCceEEEeecCCCceEEEEe------------------cCCCcceeEEEecCCCc----c
Confidence 455555 778999999999 78899999999888777642 12224479999999887 4
Q ss_pred cccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 728 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 728 ~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+..+.+|...|++++|+|+++ +|++++.||+|+||+++.+.
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHH
T ss_pred hhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECcccc
Confidence 678899999999999999999 89999999999999998764
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=310.44 Aligned_cols=310 Identities=15% Similarity=0.154 Sum_probs=240.3
Q ss_pred cccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEE
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
....+.+|...|++++|+|++ ++|++++.|+.|++|++.++ .....+ .+|...|.+++|+|++..+|++|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-------NKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-------TCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-------ccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 345678999999999999999 99999999999999999875 444444 47999999999999543899999
Q ss_pred eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 292 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
+.|+.|++||+.... ........+|...|.+++|+|+++ +|++++.||.|++||++ ..++..+ ..|...|.+
T Consensus 138 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~----~~~~~~~-~~h~~~v~~ 209 (383)
T 3ei3_B 138 SIRGATTLRDFSGSV--IQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD----GHEIFKE-KLHKAKVTH 209 (383)
T ss_dssp ETTTEEEEEETTSCE--EEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT----SCEEEEE-ECSSSCEEE
T ss_pred eCCCEEEEEECCCCc--eEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC----CCEEEEe-ccCCCcEEE
Confidence 999999999998632 111222334558899999999998 69999999999999995 3345555 689999999
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 372 ISWNRTEP-LIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 372 l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
++|+|+++ +|++|+.||.|++||++..+. ...+..+ .|...|++++|+| ++ .+|++++.|+.|++||+......
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~~~- 286 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWSKP- 286 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTTSC-
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCccc-
Confidence 99999999 999999999999999986433 3344444 7999999999999 76 69999999999999999877421
Q ss_pred HHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCC
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG 528 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 528 (812)
..+..+ +.. ...+...+. +.|+|+
T Consensus 287 -------------~~~~~~------------~~~---------------------------~~~~~~~~~-~~~~p~--- 310 (383)
T 3ei3_B 287 -------------DQIIIH------------PHR---------------------------QFQHLTPIK-ATWHPM--- 310 (383)
T ss_dssp -------------SEEEEC------------CBC---------------------------CCTTSCCCC-CEECSS---
T ss_pred -------------cccccc------------ccc---------------------------ccccccceE-EeccCC---
Confidence 111111 100 000011222 244444
Q ss_pred eEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec
Q psy4510 529 TIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG 608 (812)
Q Consensus 529 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~ 608 (812)
+.+..++|+|++++ ++ +
T Consensus 311 -----------------------------------------------------------~~~~~~~~s~dg~~--s~--s 327 (383)
T 3ei3_B 311 -----------------------------------------------------------YDLIVAGRYPDDQL--LL--N 327 (383)
T ss_dssp -----------------------------------------------------------SSEEEEECBCCTTT--CT--T
T ss_pred -----------------------------------------------------------CCceEEEecCCccc--cc--C
Confidence 24556788899988 55 8
Q ss_pred CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC--CCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 609 EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 609 ~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
.||.|++||+.++. ++..+.+ |...+..++|+| ++.+|++++ |+.|+||++
T Consensus 328 ~d~~i~iwd~~~~~-------------------------~~~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 328 DKRTIDIYDANSGG-------------------------LVHQLRDPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CCCCEEEEETTTCC-------------------------EEEEECBTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEEC
T ss_pred CCCeEEEEecCCCc-------------------------eeeeecCCCCCceEEEEEEec-CccEEEEec-CCcEEEEec
Confidence 99999999998876 5777776 457788889999 788999997 899999998
Q ss_pred CC
Q psy4510 687 RE 688 (812)
Q Consensus 687 ~~ 688 (812)
++
T Consensus 381 ~~ 382 (383)
T 3ei3_B 381 ED 382 (383)
T ss_dssp C-
T ss_pred CC
Confidence 63
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=336.47 Aligned_cols=215 Identities=22% Similarity=0.297 Sum_probs=184.1
Q ss_pred cccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
..+.+|.+.|++++|++++ ++|++|+.|++|++|++...... ...+...+.+|...|.+++|+|++ .+|++|+.||
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg 452 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDG 452 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCC-CEEEEEeCCC
Confidence 4578999999999999875 68999999999999999764100 113356789999999999999999 8999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|+|||+.++. ....+.+|...|.+++|+|+++ .|++|+.|++|++||+..... ..+.....+|...|.+++|+
T Consensus 453 ~v~vwd~~~~~----~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 453 ELRLWDLAAGV----STRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEEEEETTTTE----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEEC
T ss_pred cEEEEECCCCc----ceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEe
Confidence 99999999876 5677889999999999999998 599999999999999863211 11222225788999999999
Q ss_pred CCC--CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 376 RTE--PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 376 ~~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|++ .+|++|+.||.|++||++ ..+....+.+|.+.|++++|+|++ .+|++|+.||+|++||+...
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLS---NCKLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTT
T ss_pred CCCCcceEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCC
Confidence 987 589999999999999998 467788899999999999999987 69999999999999999766
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=304.11 Aligned_cols=307 Identities=14% Similarity=0.175 Sum_probs=241.6
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|...|++++|+|++++|++++.|+.|++|++.++ +++..+.+|...|.+++|+|++ .+|++++.||
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 96 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-------ERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADY 96 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-------hhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 3457899999999999999999999999999999999875 7888999999999999999998 8999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC-----CeEEEEECCCCCcccc--------eeecC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-----LSIRIWDTRVINTKSC--------MLTLP 362 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~--------~~~~~ 362 (812)
.|++||+.++. ....+. |...|.+++|+|+++ +|++++.+ |.|++||++....... +..+
T Consensus 97 ~i~iwd~~~~~----~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~- 169 (369)
T 3zwl_B 97 SIKLWDVSNGQ----CVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI- 169 (369)
T ss_dssp EEEEEETTTCC----EEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-
T ss_pred eEEEEECCCCc----EEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-
Confidence 99999999886 344444 888999999999999 68889888 9999999985433211 1222
Q ss_pred CcCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 363 NAHTS--DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 363 ~~~~~--~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
..|.. .+.+++|+|++++|++|+.||.|++||++. ....+..+..|...|.+++|+|++ .+|++++.|+.|++||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN--NYEYVDSIDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVD 246 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT--TTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC--CcEeEEEEecCCCceeEEEECCCC-CEEEEecCCceEEEEE
Confidence 34444 899999999999999999999999999984 367788899999999999999986 6999999999999999
Q ss_pred cCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEE
Q psy4510 441 LAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 520 (812)
+...+ ..........+..+.|+|++..+++++..++..++
T Consensus 247 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------------- 286 (369)
T 3zwl_B 247 VSTLQ-----------------VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVT----------------------- 286 (369)
T ss_dssp TTTCC-----------------EEEEEECSSCEEEEEECSSSSEEEEEECCC----------------------------
T ss_pred CCCCc-----------------eeeeecCCCCceeEEecCCCceEEEeecCCCceEE-----------------------
Confidence 98763 22222234445555555554333322222111110
Q ss_pred EEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC
Q psy4510 521 HWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS 600 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~ 600 (812)
T Consensus 287 -------------------------------------------------------------------------------- 286 (369)
T 3zwl_B 287 -------------------------------------------------------------------------------- 286 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCce
Q psy4510 601 TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680 (812)
Q Consensus 601 ~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~ 680 (812)
..........|++|++.+.. ++..+.+|...|++++|+| ++++|++++.||.
T Consensus 287 --~~~~~~~~~~i~~~d~~~~~-------------------------~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 287 --TTSANEGKFEARFYHKIFEE-------------------------EIGRVQGHFGPLNTVAISP-QGTSYASGGEDGF 338 (369)
T ss_dssp ----------CEEEEEETTTCC-------------------------EEEEEECCSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred --EEecCCCcceeEEEecCCCc-------------------------chhheecccCcEEEEEECC-CCCEEEEEcCCCe
Confidence 00000223379999998876 6788899999999999999 7889999999999
Q ss_pred EEEEecCC
Q psy4510 681 IHIWTPRE 688 (812)
Q Consensus 681 v~iWd~~~ 688 (812)
|++|++.+
T Consensus 339 v~iw~~~~ 346 (369)
T 3zwl_B 339 IRLHHFEK 346 (369)
T ss_dssp EEEEEECH
T ss_pred EEEEECcc
Confidence 99998864
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=317.30 Aligned_cols=341 Identities=15% Similarity=0.183 Sum_probs=237.3
Q ss_pred EEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.+..+.+.|.+++|+|++ .+|++|+.|+.|++|++.++. ......+.+|...|.+++|+|+++ +|++++.||.|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSEEE
T ss_pred eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeEEE
Confidence 344567899999999998 799999999999999998762 015677889999999999999998 6999999999999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-CCCCEEEEEEccCCCc
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESS 425 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~ 425 (812)
||++......+...+ ..|...|.+++|+|++++|++|+.||.|++||++.......+..+.. |...|++++|+|++ .
T Consensus 82 wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 159 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-V 159 (377)
T ss_dssp C------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS-S
T ss_pred EEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC-C
Confidence 999865423344555 67999999999999999999999999999999985332235677777 99999999999986 6
Q ss_pred EEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy4510 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505 (812)
Q Consensus 426 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (812)
+|++++.|+.|++||+....... .+ .. .+.+
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~----------~~-------~~---------~~~~----------------------- 190 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDA----------KP-------EA---------SVWG----------------------- 190 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-----------CC-------CS---------CSSC-----------------------
T ss_pred EEEEEeCCCEEEEEEEEecccCC----------Cc-------cc---------cccc-----------------------
Confidence 99999999999999997652100 00 00 0000
Q ss_pred ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEec
Q psy4510 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR 585 (812)
Q Consensus 506 ~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (812)
... + ...+...+ +
T Consensus 191 ---------~~~------~---------------------------------------------------~~~~~~~~-~ 203 (377)
T 3dwl_C 191 ---------SRL------P---------------------------------------------------FNTVCAEY-P 203 (377)
T ss_dssp ---------SCC------C---------------------------------------------------EEEEEECC-C
T ss_pred ---------ccc------c---------------------------------------------------hhhhhhcc-c
Confidence 000 0 00011122 6
Q ss_pred ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeC
Q psy4510 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 665 (812)
Q Consensus 586 h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~s 665 (812)
|...|.+++|+|++++|+++ +.||.|++||+.++... ..++..+.+|...|.+++|+
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~--~~d~~i~iwd~~~~~~~---------------------~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYA--GHDSSVTIAYPSAPEQP---------------------PRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEE--ETTTEEC-CEECSTTSC---------------------EEECCCEECSSSCEEEEEEE
T ss_pred CCceEEEEEECCCCCEEEEE--eCCCcEEEEECCCCCCc---------------------ceeeEeecCCCCceEEEEEc
Confidence 77899999999999999998 89999999999987620 01266788999999999999
Q ss_pred CCCCCeEEecCCCceEEEEecCC-Cce--------------------------eEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 666 STEPGVLATGDCKRNIHIWTPRE-AGA--------------------------WSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 666 p~~~~~las~s~Dg~v~iWd~~~-~~~--------------------------~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
| ++++|++++.|+.+ +|+... +.. .....|++.. ..++..+.
T Consensus 261 ~-~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 329 (377)
T 3dwl_C 261 N-ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR---------STFRNMDL 329 (377)
T ss_dssp E-TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------------------
T ss_pred C-CCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc---------ccccchhh
Confidence 9 78899999887777 555542 210 0000011110 11111111
Q ss_pred CCCCCcccccccccCCCcceeEeEEecCCce---eEEeeccCCceEEeee
Q psy4510 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKR---VLASCSVDRSNRIGAR 765 (812)
Q Consensus 719 ~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~---~L~s~s~Dg~i~iWd~ 765 (812)
..... .......+|.+.|++|++.+.+.. .|+|||.||+|+|||+
T Consensus 330 ~g~~~--~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 330 KGSSQ--SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccc--cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 10000 023345679999999998766542 4999999999999985
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-35 Score=322.89 Aligned_cols=294 Identities=18% Similarity=0.205 Sum_probs=227.0
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCce
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i 247 (812)
.....+|..+|+|++|+|.++++||+|+.||.|+|||+.++... ....+.+|.+.|++|+|+| ++.+|++++.|++|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 33445788999999999977889999999999999999876532 3456779999999999998 68899999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEc---CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFS---GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
++||+.++ ....+. .+...+.+++|+|++ .+|++|+.||.|++||++.. ....+.+|...|++
T Consensus 190 ~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~-----~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 190 RLQDFKGN--------ILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGK-----ELWNLRMHKKKVTH 255 (435)
T ss_dssp EEEETTSC--------EEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSC-----BCCCSBCCSSCEEE
T ss_pred EEeeccCC--------ceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcc-----eeEEEecccceEEe
Confidence 99999763 233332 233467899999998 89999999999999998754 35678899999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
++|+|+++.+|++|+.|+.|++||++.......+... .+|...|++++|+|++++|++|+.||.|+|||++. +...
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~---~~~~ 331 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ---WDCP 331 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS---SSSE
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEe-eeccccccceeECCCCCeeEEEcCCCEEEEEECCC---Cccc
Confidence 9999999888999999999999999876544443333 68999999999999999999999999999999984 4555
Q ss_pred EEcccCCC------CEEEEEEccCCCcEEEEEE------------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 405 ATFKHHTA------PVTTVEWHPTESSTFASGG------------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 405 ~~~~~h~~------~v~~v~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
..+..|.. .+....|+|.+. ++++++ .++.|++||..+++. +...
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~----------------~~~l 394 (435)
T 4e54_B 332 LGLIPHPHRHFQHLTPIKAAWHPRYN-LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM----------------MCQL 394 (435)
T ss_dssp EEECCCCCCCCSSSCCCBCEECSSSS-CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE----------------EEEE
T ss_pred eEEecccccccccceeEEEEEcCCCC-EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE----------------EEEE
Confidence 55555432 233456777653 444443 345799999988732 2222
Q ss_pred e-cCCCceeEE-EEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 467 H-LGQKEIKEL-HWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 467 ~-~~~~~v~~~-~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
. .+...|.++ +|+|++. ++++++++.+.+|+..
T Consensus 395 ~~~~~~~v~s~~~fspdg~-~lasg~d~~i~iW~~~ 429 (435)
T 4e54_B 395 YDPESSGISSLNEFNPMGD-TLASAMGYHILIWSQQ 429 (435)
T ss_dssp CCSSCCCCCCEEEECTTSS-CEEEECSSEEEECCCC
T ss_pred eCCCCCcEEEEEEECCCCC-EEEEEcCCcEEEEECC
Confidence 2 334467776 6999975 4556665556666443
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-34 Score=308.32 Aligned_cols=216 Identities=16% Similarity=0.156 Sum_probs=185.2
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
+..|..+|++++|+|++++|++++.++.|++|++.++ ...++..+.+|...|.+++|+|++ .+|++|+.||.|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-----cEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEE
Confidence 3458999999999999999999999999999999874 122788899999999999999998 8999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+||+.++.. .....+..|...|.+++|+|+++ +|++++.||.|++||++..........+...|...|.+++|+|++
T Consensus 78 vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 78 VWTLKGRTW--KPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEETTEE--EEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEECCCCee--eeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 999977641 12334567899999999999998 699999999999999986543333445557789999999999999
Q ss_pred CEEEEEeCCCcEEEEecCC---------------CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 379 PLIVSGGDDGCIHVWDLRR---------------FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~---------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
++|++|+.||.|++||++. ...+..+..+..|...|.+++|+|++ .+|++++.|+.|++||+..
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGG
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCC
Confidence 9999999999999999742 11457788888999999999999987 6999999999999999875
Q ss_pred C
Q psy4510 444 E 444 (812)
Q Consensus 444 ~ 444 (812)
.
T Consensus 234 ~ 234 (372)
T 1k8k_C 234 K 234 (372)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=314.29 Aligned_cols=346 Identities=13% Similarity=0.235 Sum_probs=244.1
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--------
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF-------- 268 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------- 268 (812)
++.++||++.... ....+.+|.+.|++++|+| ++++|++++.||.|++|++.++. .......
T Consensus 22 ~~~~~v~~~~~~~----~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~~~~~ 92 (408)
T 4a11_B 22 ESTRRVLGLELNK----DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSS-----RQSYYTCKAVCSIGR 92 (408)
T ss_dssp HHHHHHHTEEECT----TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCS-----SSSCEEECEEEEECT
T ss_pred cCcceeeccccCc----ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCc-----ccceEeccccccccc
Confidence 4568888887765 5667888999999999999 99999999999999999999862 1111111
Q ss_pred ---cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC--eEEEEEECCCe
Q psy4510 269 ---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK--RVLASCSVDLS 343 (812)
Q Consensus 269 ---~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~ 343 (812)
.+|...|.+++|+|++..+|++++.||.|++||+.++. ....+ .+...+.+++|+|.+. .++++++.||.
T Consensus 93 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (408)
T 4a11_B 93 DHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ----TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPK 167 (408)
T ss_dssp TCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE----EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSS
T ss_pred cccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc----cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCe
Confidence 36999999999999655899999999999999999875 23333 3778899999998543 27999999999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEc---------------
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATF--------------- 407 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~--------------- 407 (812)
|++||+++. ..+..+ ..|...|.+++|+|+++ +|++|+.||.|++||++.. ...+..+
T Consensus 168 v~~~d~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 168 VQLCDLKSG---SCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA--SGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EEEEESSSS---CCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS--SCCSEECCTTTTCSCCCTTTSS
T ss_pred EEEEeCCCc---ceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC--Ccccccccccccccceeecccc
Confidence 999999853 345555 68999999999999998 6999999999999999862 2234444
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
..|...|.+++|+|++ .+|++++.||.|++||+...... ...... .
T Consensus 242 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~-----------------~~~~~~----------~------ 287 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENT-----------------LVNYGK----------V------ 287 (408)
T ss_dssp CSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCBC-----------------CCCCCC----------C------
T ss_pred ccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCccc-----------------eecccc----------c------
Confidence 5789999999999986 69999999999999999876320 000000 0
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
. ..
T Consensus 288 -------------------------~----------~~------------------------------------------ 290 (408)
T 4a11_B 288 -------------------------C----------NN------------------------------------------ 290 (408)
T ss_dssp -------------------------C----------CC------------------------------------------
T ss_pred -------------------------c----------cc------------------------------------------
Confidence 0 00
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
....+........+..++++ +.++.|++||+.++.
T Consensus 291 ------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~d~~~~~------------------------- 325 (408)
T 4a11_B 291 ------------------SKKGLKFTVSCGCSSEFVFV--PYGSTIAVYTVYSGE------------------------- 325 (408)
T ss_dssp ------------------CSSCCCCEECCSSSSCEEEE--EETTEEEEEETTTCC-------------------------
T ss_pred ------------------ccccceeEEecCCCceEEEE--ecCCEEEEEECcCCc-------------------------
Confidence 00000000111223345555 578999999999876
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE--------EecCCCCEEEeecCCCeEEEeecC
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY--------LYTNRFGVLATGDCKRNIHIWTPR 719 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~--------~~s~dg~~lasgs~dg~i~iwd~~ 719 (812)
++..+.+|...|++++|+| ++.+|++++.||.|++|++.+++..... ..........+.+.++.+++|+..
T Consensus 326 ~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 326 QITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred ceeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCc
Confidence 7888999999999999999 7889999999999999999986554321 122334456677789999999865
Q ss_pred C
Q psy4510 720 E 720 (812)
Q Consensus 720 ~ 720 (812)
.
T Consensus 405 ~ 405 (408)
T 4a11_B 405 Q 405 (408)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=308.10 Aligned_cols=262 Identities=21% Similarity=0.331 Sum_probs=213.6
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEE
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAE 249 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~v 249 (812)
+.||.+.|++++|+| +|++||||+.|++|+|||+.++.. .....+.+|..+|.+++|++ ++++|++++.|++|++
T Consensus 9 ~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~--~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQ--ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -----CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEE--EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCc--EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 348999999999999 999999999999999999976542 13567889999999999986 4899999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
||+.++ ...+...+.+|...|.+++|+|+. ..+|++|+.|++|++|++.....+. ....+.+|...|.+++|+
T Consensus 86 Wd~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 86 WREENG-----TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp ECCSSS-----CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBCCCEEC
T ss_pred EECCCC-----cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcceEEEc
Confidence 999875 235667888999999999999983 2789999999999999998764322 245667899999999999
Q ss_pred CCC----------------CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC----CEEEEEeCCC
Q psy4510 329 PGE----------------KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE----PLIVSGGDDG 388 (812)
Q Consensus 329 p~~----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----~~l~sg~~dg 388 (812)
|+. ..+|++|+.|++|++||++......++..+ .+|...|++++|+|++ ++|++|+.||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 973 136999999999999999743222345555 7899999999999986 7999999999
Q ss_pred cEEEEecCCCCCC-CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|++|+++..... .....+..|...|.+++|+|++ .+|++++.|++|++|+....
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEECTT
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEECCC
Confidence 9999999752211 1223456789999999999997 68999999999999998643
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=307.65 Aligned_cols=320 Identities=17% Similarity=0.254 Sum_probs=238.3
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC---CCeEEEEE
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG---EKRVLASC 338 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~~l~s~ 338 (812)
...+.+|...|.+++|+|++..++++|+. ||.|++|++.++.. ......+|...|.+++|+|+ +. +|++|
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~ 86 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL---KLLREIEKAKPIKCGTFGATSLQQR-YLATG 86 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE---EEEEEEEESSCEEEEECTTCCTTTC-CEEEE
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc---cceeeecccCcEEEEEEcCCCCCCc-eEEEe
Confidence 34567899999999999998667778876 99999999998762 12223478999999999999 45 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE------EcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS------WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~------~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
+.||.|++||++... ..+..+ ..|...|.+++ |+|++++|++|+.||.|++||++. ...++..+..|.+
T Consensus 87 ~~dg~i~iwd~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPE--MPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ--KDDPVANMEPVQG 161 (357)
T ss_dssp ETTSCEEEECTTSCS--SCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS--CSSCSEEECCCTT
T ss_pred cCCCeEEEEeCCCCC--ccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC--CCCcceeccccCC
Confidence 999999999998543 144555 68999999995 468899999999999999999985 2236777766554
Q ss_pred ----CEEEEE----EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 413 ----PVTTVE----WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 413 ----~v~~v~----~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
.|.++. |+|++ .+|++++.|+.|++||++... ..
T Consensus 162 ~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-----------------~~-------------------- 203 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA-----------------LR-------------------- 203 (357)
T ss_dssp SCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE-----------------EE--------------------
T ss_pred CCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc-----------------ee--------------------
Confidence 899998 67776 699999999999999987651 00
Q ss_pred EEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccccc
Q psy4510 485 TIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDE 564 (812)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 564 (812)
T Consensus 204 -------------------------------------------------------------------------------- 203 (357)
T 3i2n_A 204 -------------------------------------------------------------------------------- 203 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCccceEEecccceEEEEEEec---cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCC
Q psy4510 565 SEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ---YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641 (812)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~---~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 641 (812)
....|...|.+++|+| ++.+++++ +.||.|++||+.+....
T Consensus 204 -----------------~~~~~~~~v~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~----------------- 247 (357)
T 3i2n_A 204 -----------------WETNIKNGVCSLEFDRKDISMNKLVAT--SLEGKFHVFDMRTQHPT----------------- 247 (357)
T ss_dssp -----------------EEEECSSCEEEEEESCSSSSCCEEEEE--ESTTEEEEEEEEEEETT-----------------
T ss_pred -----------------eecCCCCceEEEEcCCCCCCCCEEEEE--CCCCeEEEEeCcCCCcc-----------------
Confidence 0112233677778888 78889888 89999999999886511
Q ss_pred CCCCCCCeeeecCCCCceEEEEeCCCCCC-eEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCC
Q psy4510 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPRE 720 (812)
Q Consensus 642 ~~~~~~~~~~~~gh~~~V~~l~~sp~~~~-~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~ 720 (812)
.......+.+|...|++++|+| ++. +|++++.||.|++||+.++...... .++|...... +..
T Consensus 248 ---~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~g~~~~~~---~~~------- 311 (357)
T 3i2n_A 248 ---KGFASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKK--DSEGIEMGVA---GSV------- 311 (357)
T ss_dssp ---TEEEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--C--CTTSCCCCCC---CEE-------
T ss_pred ---cceeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccc--cCCCCccccc---ccc-------
Confidence 0001223459999999999999 566 8999999999999998754432211 1222111100 000
Q ss_pred CCCcccccccccCCCcceeEeEEecCCceeEE-eeccCCceEEeeecCcc
Q psy4510 721 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA-SCSVDRSNRIGARRDML 769 (812)
Q Consensus 721 ~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~-s~s~Dg~i~iWd~~~~~ 769 (812)
.++..+.+|...|++++|+|+|+ +|+ |++.||.|+|||+....
T Consensus 312 -----~~~~~~~~~~~~v~~~~~s~~~~-~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 312 -----SLLQNVTLSTQPISSLDWSPDKR-GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSST-TEEEEEETTSEEEEEEECC--
T ss_pred -----ceeeccccCCCCeeEEEEcCCCC-eEEEEecCCCcEEEEECCCcc
Confidence 14557889999999999999999 677 89999999999998764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-34 Score=297.16 Aligned_cols=290 Identities=16% Similarity=0.207 Sum_probs=240.0
Q ss_pred CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.++..++.+|.+.|.+++| |++ .+|++|+.||.|++||+.+.. ....+..|...|.+++|+|++. +|++++.|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 80 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW----LGTVVYTGQGFLNSVCYDSEKE-LLLFGGKD 80 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE----EEEEEEECSSCEEEEEEETTTT-EEEEEETT
T ss_pred HHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE----EEEEeecCCccEEEEEECCCCC-EEEEecCC
Confidence 4677889999999999999 887 799999999999999997765 4566778999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
|.|++|++........+..+ ..|...|.+++| +++++++|+.||.|++||. ...+..+..|...|.++.|+|
T Consensus 81 g~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 81 TMINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp SCEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-----TEEEEEEECCSSCEEEEEEEE
T ss_pred CeEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-----CcEEEecccCCCceeEEEEcc
Confidence 99999999876655666666 789999999999 5679999999999999993 467888889999999999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.+..+|++++.|+.|++||.... ..
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~~~~-------------------~~------------------------------------ 177 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQNDKV-------------------IK------------------------------------ 177 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETTEE-------------------EE------------------------------------
T ss_pred CCCCEEEEEECCCCEEEEecCce-------------------EE------------------------------------
Confidence 44579999999999999993211 00
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 178 -------------------------------------------------------------------------------- 177 (313)
T 3odt_A 178 -------------------------------------------------------------------------------- 177 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEe-cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceE
Q psy4510 582 YFI-RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 660 (812)
Q Consensus 582 ~~~-~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 660 (812)
.+. .|...+.+++|+|++. ++++ +.||.|++||+.++. ++..+.+|...|+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~--~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~i~ 229 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISC--SNDGLIKLVDMHTGD-------------------------VLRTYEGHESFVY 229 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEE--ETTSEEEEEETTTCC-------------------------EEEEEECCSSCEE
T ss_pred EEeccCcccEEEEEEcCCCe-EEEc--cCCCeEEEEECCchh-------------------------hhhhhhcCCceEE
Confidence 001 1334678889999888 7777 799999999998876 6788899999999
Q ss_pred EEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 661 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 661 ~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+++|+| ++ .|++++.||.|++||+. +++ +...+.+|...|++
T Consensus 230 ~~~~~~-~~-~l~~~~~dg~v~iwd~~--------------------------------~~~----~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 230 CIKLLP-NG-DIVSCGEDRTVRIWSKE--------------------------------NGS----LKQVITLPAISIWS 271 (313)
T ss_dssp EEEECT-TS-CEEEEETTSEEEEECTT--------------------------------TCC----EEEEEECSSSCEEE
T ss_pred EEEEec-CC-CEEEEecCCEEEEEECC--------------------------------CCc----eeEEEeccCceEEE
Confidence 999999 55 56677776666666653 443 34566778889999
Q ss_pred eEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 741 LQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 741 l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
++|+|+++ |++++.||.|++|+++.++
T Consensus 272 ~~~~~~~~--~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 272 VDCMSNGD--IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEECTTSC--EEEEETTSCEEEEESCGGG
T ss_pred EEEccCCC--EEEEeCCCcEEEEeCCCCc
Confidence 99999998 5679999999999999876
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=309.84 Aligned_cols=338 Identities=16% Similarity=0.215 Sum_probs=239.7
Q ss_pred EEcCCCCcEEEEEecCC---CCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCEEEEEEcCCCC---eEEEEEE
Q psy4510 267 SFSGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQWSPGEK---RVLASCS 339 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~---~~l~s~~ 339 (812)
...+|.+.|.+++|+|+ +...+++++.++.|++|++.++....... .....|...|.+++|+|++. .+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 44667777777899999998765321111 11223778899999999942 3799999
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEc---ccCCCCEE
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATF---KHHTAPVT 415 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~ 415 (812)
.||.|++||+.+ ...+..+ ..|...|++++|+| ++++|++|+.||.|++||++ .++.+..+ ..|...|.
T Consensus 93 ~dg~i~v~d~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 93 SRGIIRIINPIT---MQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ---TDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp TTCEEEEECTTT---CCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT---TTEEEEEECSTTSCSSCEE
T ss_pred CCCEEEEEEchh---ceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee---cCeEEEEecccccccCcee
Confidence 999999999984 3445555 68999999999999 88999999999999999998 45666776 78999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
+++|+|++ .+|++++.||.|++||+...+....... .+.++|+...+....
T Consensus 166 ~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~------ 216 (366)
T 3k26_A 166 SADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKE----------------------SYDYNPNKTNRPFIS------ 216 (366)
T ss_dssp EEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHH----------------------HHTCCGGGCSSCCCC------
T ss_pred EEEECCCC-CEEEEecCCCCEEEEECCCCccccccce----------------------eEEecCCCCcccccc------
Confidence 99999986 6999999999999999987632211100 011122211000000
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
...
T Consensus 217 ------------------------~~~----------------------------------------------------- 219 (366)
T 3k26_A 217 ------------------------QKI----------------------------------------------------- 219 (366)
T ss_dssp ------------------------EEE-----------------------------------------------------
T ss_pred ------------------------eee-----------------------------------------------------
Confidence 000
Q ss_pred CCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 655 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh 655 (812)
..........|...|.+++|+ +++++++ +.||.|++||+.+........ ........++..+.+|
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~--~~d~~i~~wd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 284 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GDLILSK--SCENAIVCWKPGKMEDDIDKI-----------KPSESNVTILGRFDYS 284 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TTEEEEE--CSSSEEEEEEESSTTCCGGGC-----------CTTCCCEEEEEEEECS
T ss_pred ccCccccccCCcceEEEEEEc--CCEEEEE--ecCCEEEEEeCCCcccccccc-----------ccCCcchheecccccc
Confidence 000122334577889999998 7788888 899999999998765321000 0011112357778899
Q ss_pred CCceEEEEeCCCC--CCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccC
Q psy4510 656 LTEGFAMDWSSTE--PGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 733 (812)
Q Consensus 656 ~~~V~~l~~sp~~--~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~g 733 (812)
...|++++|+| + +.+|++++.||.|++||+ .+++........+.+
T Consensus 285 ~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~--------------------------------~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 285 QCDIWYMRFSM-DFWQKMLALGNQVGKLYVWDL--------------------------------EVEDPHKAKCTTLTH 331 (366)
T ss_dssp SCCSSCCCCEE-CTTSSEEEEECTTSCEEEEEC--------------------------------CSSSGGGCEEEEECC
T ss_pred CCcEEEEEEcC-CCCCcEEEEEecCCcEEEEEC--------------------------------CCCCCccccceEEcc
Confidence 99999999998 5 556666666555555554 444322112335666
Q ss_pred C--CcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 734 H--TNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 734 H--~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
| ...|++++|+|+++ +|++++.||.|+|||+.
T Consensus 332 ~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 332 HKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred cccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence 6 78999999999999 89999999999999985
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-35 Score=316.69 Aligned_cols=253 Identities=13% Similarity=0.191 Sum_probs=205.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|.++|++++|+| ++++||+|+.||.|+||++.++.. .....+.+|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 9 ~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 9 ILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGW--KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp ECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEE--EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred cCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCce--EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 3668999999999 999999999999999999987620 1667888999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEK 332 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~ 332 (812)
++. ...+...+.+|...|.+++|+|++ .+|++|+.|+.|++||+..+..+. ....+.+ |...|.+++|+|+++
T Consensus 86 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 86 PDG----TWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWW-VSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp -------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CC-CCEEECSSCCSCEEEEEECTTSS
T ss_pred CCC----ceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccce-eeeEeecccCCCeEEEEEcCCCC
Confidence 851 134778888999999999999998 799999999999999998875322 1445566 999999999999998
Q ss_pred eEEEEEECCCeEEEEECCCCC---------------cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVIN---------------TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
+|++++.||.|++||++... ...++..+ .|...|++++|+|++++|++|+.||.|++||++.
T Consensus 160 -~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 160 -LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp -EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred -EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 69999999999999986322 12233333 8999999999999999999999999999999985
Q ss_pred CCCCCc----eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 398 FKKGSS----VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 398 ~~~~~~----~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+.. +..+..|..+|.+++|+|++ .+|++++.+ .+.+|+...
T Consensus 237 ---~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~-~~~~~~~~~ 281 (377)
T 3dwl_C 237 ---PEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNY-SPILLQGNE 281 (377)
T ss_dssp ---TTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSS-SEEEECCCC
T ss_pred ---CCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCC-cEEEEEeCC
Confidence 344 67788999999999999997 577777655 566887764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=311.59 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=178.1
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC---CC---CEE
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST---EP---GVL 288 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~---~~l 288 (812)
....+.+|...|++++|+| ++|++++.|+.|++|++.++... ....++..+.+|...|.+++|+|+ .. .+|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4567889999999999999 89999999999999999885100 012367888999999999999998 22 489
Q ss_pred EEEeCCCcEEEEeCCCCCcc-eeccccccCC-----CCCEEEEEEc----CCCCeE-EEEEECCCeEEEEECCC------
Q psy4510 289 ATGDCKRNIHIWTPREAGAW-QVDQKPLVGH-----TNSVEDLQWS----PGEKRV-LASCSVDLSIRIWDTRV------ 351 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~-~~~~~~~~~h-----~~~v~~~~~~----p~~~~~-l~s~~~dg~i~iwd~~~------ 351 (812)
++|+.||.|++|++.++... ......+..| ...|.+++|+ |+++ + |++++.||.|++||++.
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999887620 0015566777 5899999999 9998 6 99999999999999985
Q ss_pred CCccc--ceeecC------CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc---C---CCCEEEE
Q psy4510 352 INTKS--CMLTLP------NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH---H---TAPVTTV 417 (812)
Q Consensus 352 ~~~~~--~~~~~~------~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---h---~~~v~~v 417 (812)
..... ....+. ..|...|.+++|+|++ +|++|+.||.|++||++ ..+.+..+.. | ...|.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS---TLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT---TTEEEEEEECCC---CCCCCEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC---CCceeEEEeccccccccCCccceE
Confidence 22211 000221 4578899999999999 99999999999999998 4677888888 9 9999999
Q ss_pred EEccCCCcEEEEEECC---CCEEEEEcCCC
Q psy4510 418 EWHPTESSTFASGGAD---DQIALWDLAVE 444 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~d---g~v~iwd~~~~ 444 (812)
+|+|++ .+|++++.| +.|++||+...
T Consensus 240 ~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 240 KFSPQG-SLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EECSST-TEEEEEEEETTEEEEEEEETTTC
T ss_pred EECCCC-CEEEEEecCCCCceEEEEECCCC
Confidence 999986 699999999 99999999865
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=311.14 Aligned_cols=256 Identities=13% Similarity=0.186 Sum_probs=215.1
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCC----C---CcE
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDL----K---TAL 238 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~----~---~~l 238 (812)
....+.+|.+.|++++|+| ++||+|+.||.|+||++.+... .......+.+|..+|++++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 3445568999999999988 7999999999999999988652 12245667799999999999999 9 999
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCC-----ceEEcCC-----CCcEEEEEec----CCCCCE-EEEEeCCCcEEEEeCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPP-----LFSFSGH-----LTEGFAMDWS----STEPGV-LATGDCKRNIHIWTPR 303 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~~~h-----~~~v~~l~~s----p~~~~~-l~sg~~dg~i~vwd~~ 303 (812)
++++.|+.|++|++.++ .. +..+.+| ...|.+++|+ |++ .+ |++|+.||.|++||+.
T Consensus 85 ~s~~~dg~i~iw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITRE-------DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp EEEETTSCEEEEEEEEC-------TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEE
T ss_pred EEEcCCCCEEEEEccCC-------cccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCC
Confidence 99999999999999885 44 7788888 5999999999 988 67 9999999999999998
Q ss_pred C------CCccee-ccccc-------cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc---C-
Q psy4510 304 E------AGAWQV-DQKPL-------VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA---H- 365 (812)
Q Consensus 304 ~------~~~~~~-~~~~~-------~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~- 365 (812)
. ...... ....+ ..|...|.+++|+|++ +|++++.||.|++||+++ ...+..+ .. |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~---~~~~~~~-~~~~~h~ 230 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST---LRPLYNF-ESQHSMI 230 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT---TEEEEEE-ECCC---
T ss_pred ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC---CceeEEE-ecccccc
Confidence 8 442110 00044 4588999999999999 699999999999999984 3445555 45 8
Q ss_pred --CCCeEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceEEccc-------------CCCCEEEEEEccCCCcEE
Q psy4510 366 --TSDVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKH-------------HTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 366 --~~~v~~l~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~l 427 (812)
...|.+++|+|++++|++|+.| |.|++||++ ..+.+..+.. |...|.+++|+|++ .+|
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 306 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE---FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETL 306 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT---TCCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEE
T ss_pred ccCCccceEEECCCCCEEEEEecCCCCceEEEEECC---CCcccceeccCcccccccccccccCCcEEEEEECCCC-CEE
Confidence 8999999999999999999999 999999998 4678888888 99999999999987 699
Q ss_pred EEEECCCCEEEEEcCCC
Q psy4510 428 ASGGADDQIALWDLAVE 444 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~ 444 (812)
++++.|+.|++||+...
T Consensus 307 ~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEETTSEEEEEETTTT
T ss_pred EEEeCCCeEEEEEcCCC
Confidence 99999999999999766
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=308.21 Aligned_cols=257 Identities=14% Similarity=0.235 Sum_probs=208.3
Q ss_pred CCCCCceEEEEeCCC---CCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCC----CCcEEEeeCC
Q psy4510 173 SGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDL----KTALQTVDDP 244 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~---~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~----~~~l~s~~~d 244 (812)
.+|.++|++++|+|. ...++++++.++.|+||++.+++...... .....|...|++++|+|+ +++|++++.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 389999999999982 24455555556799999998766332211 122247789999999999 6689999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC-CCCCEEEEEeCCCcEEEEeCCCCCcceeccccc---cCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---VGHTN 320 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---~~h~~ 320 (812)
+.|++|++.++ +++..+.+|...|.+++|+| ++ .+|++|+.||.|++||+.++. ....+ .+|..
T Consensus 95 g~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~ 162 (366)
T 3k26_A 95 GIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDT----LVAIFGGVEGHRD 162 (366)
T ss_dssp CEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTE----EEEEECSTTSCSS
T ss_pred CEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCe----EEEEecccccccC
Confidence 99999999875 77888999999999999999 55 899999999999999998876 33333 68999
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce------------------------eecCCcCCCCeEEEEEcC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM------------------------LTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------------~~~~~~~~~~v~~l~~~~ 376 (812)
.|.+++|+|++. +|++++.||.|++||+++......+ ......|...|.+++|+
T Consensus 163 ~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 163 EVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred ceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 999999999998 6999999999999999853211100 01113489999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCC-----------CCceEEcccCCCCEEEEEEccC--CCcEEEEEECCCCEEEEEcCC
Q psy4510 377 TEPLIVSGGDDGCIHVWDLRRFKK-----------GSSVATFKHHTAPVTTVEWHPT--ESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 377 ~~~~l~sg~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~--~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+++|++++.||.|++||++.... ...+..+..|...|++++|+|+ + .+|++++.||.|++||+..
T Consensus 241 -~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 -GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp -TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEEEEECCS
T ss_pred -CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEEEEECCC
Confidence 77999999999999999985321 0237788889999999999998 6 6999999999999999987
Q ss_pred CC
Q psy4510 444 ER 445 (812)
Q Consensus 444 ~~ 445 (812)
..
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 63
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=304.92 Aligned_cols=261 Identities=16% Similarity=0.170 Sum_probs=202.2
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc---------cccCCCCCCeeeeeEcC-CCCcE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ---------KPLGGHTNSAEDLQWSD-LKTAL 238 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~---------~~l~~h~~~V~~l~~s~-~~~~l 238 (812)
...+.+|.+.|++++|+|.++++||+|+.||.|+||++.+........ ....+|...|.+++|+| ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 344558999999999999889999999999999999999876422111 11246999999999999 77899
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCC--CEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
++++.|+.|++|++.++ .+...+. +...+.++.|+|.++ .++++|+.+|.|++||+.++. ....+.
T Consensus 116 ~s~~~d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~----~~~~~~ 183 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTL-------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS----CSHILQ 183 (408)
T ss_dssp EEEETTSEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC----CCEEEC
T ss_pred EEEeCCCeEEEeeCCCC-------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc----eeeeec
Confidence 99999999999999874 4555554 778899999999653 389999999999999999876 567788
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc------------eeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC------------MLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
+|...|.+++|+|+++++|++++.||.|++||++....... .......|...|.+++|+|++++|++|
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 89999999999999997899999999999999986431111 111115788999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCC----CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHT----APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.||.|++||++. +.....+..+. .....+.+.......+++++.++.|++||+...
T Consensus 264 ~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 264 GTDNRMRLWNSSN---GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp ETTSCEEEEETTT---CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred cCCCeEEEEECCC---CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 9999999999985 33322222211 111112222222346777778899999998765
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=302.83 Aligned_cols=290 Identities=22% Similarity=0.340 Sum_probs=235.2
Q ss_pred CCCCCee--eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 221 GHTNSAE--DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 221 ~h~~~V~--~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+|...+. +++|+ +..+++++.++.|++|++.++ .....+.. |...|.+++|+|++ .+|++|+.||.|
T Consensus 89 ~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~-------~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i 158 (401)
T 4aez_A 89 GIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSG-------SVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLV 158 (401)
T ss_dssp TCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTC-------CEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCC-------cEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeE
Confidence 4555444 45555 467899999999999999885 44455544 88999999999998 899999999999
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
++||+.++. ....+.+|...|.+++|++ . +|++++.||.|++||++... ..+..+ ..|...|.+++|+|+
T Consensus 159 ~iwd~~~~~----~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 159 DIYDVESQT----KLRTMAGHQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIAN--HQIGTL-QGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEETTTCC----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTT
T ss_pred EEEECcCCe----EEEEecCCCCceEEEEECC--C-EEEEEcCCCCEEEEecccCc--ceeeEE-cCCCCCeeEEEEcCC
Confidence 999999887 5667789999999999953 4 79999999999999998532 234444 789999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE--CCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG--ADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
+++|++|+.||.|++||++ ...++..+..|...|.+++|+|++..++++++ .|+.|++||+.+.+.
T Consensus 229 ~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--------- 296 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDAR---SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--------- 296 (401)
T ss_dssp SSEEEEEETTSCEEEEETT---CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE---------
T ss_pred CCEEEEEeCCCeEEEccCC---CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE---------
Confidence 9999999999999999998 46788889999999999999998888888876 799999999976521
Q ss_pred hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
...
T Consensus 297 --------~~~--------------------------------------------------------------------- 299 (401)
T 4aez_A 297 --------VNT--------------------------------------------------------------------- 299 (401)
T ss_dssp --------EEE---------------------------------------------------------------------
T ss_pred --------EEE---------------------------------------------------------------------
Confidence 000
Q ss_pred CCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEE
Q psy4510 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGI 615 (812)
Q Consensus 536 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~i 615 (812)
..+...|.+++|+|+++.+++++++.||.|++
T Consensus 300 ------------------------------------------------~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 300 ------------------------------------------------VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSI 331 (401)
T ss_dssp ------------------------------------------------EECSSCEEEEEECSSSSEEEEEECTTTCEEEE
T ss_pred ------------------------------------------------EeCCCcEEEEEECCCCCeEEEEeecCCCcEEE
Confidence 00122577888999999999865468999999
Q ss_pred EeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce
Q psy4510 616 WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 691 (812)
Q Consensus 616 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~ 691 (812)
|++.++... ....+.+|...|++++|+| ++.+|++++.||.|++|++.+++.
T Consensus 332 ~~~~~~~~~-----------------------~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 332 WSYSSSGLT-----------------------KQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEETTEEE-----------------------EEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEECCC---
T ss_pred EecCCccce-----------------------eEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcc
Confidence 999886421 3455789999999999999 788899999888888888876544
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-33 Score=302.31 Aligned_cols=286 Identities=20% Similarity=0.347 Sum_probs=233.7
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
.++.|+||+. +.|++| .|++|+|||..++ ....+..+.+|...|++|+|+|++ .+|++|+.||+|+|||+.+
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg-----~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCC-----CEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCC
Confidence 4678999975 466665 5999999999986 222333455788899999999999 8999999999999999998
Q ss_pred CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
+. ....+.+|...+.+++|++ . +|++|+.|+.+++||.+... ..+..+ .+|...+..+.|+|++++++++
T Consensus 179 ~~----~~~~~~~h~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~--~~~~~~-~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 179 QK----RLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp TE----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEEE
T ss_pred Cc----EEEEEeCCCCceEEEeeCC--C-EEEEEeCCCceeEeeecccc--eeeEEe-cccccceeeeeecCCCCeeeee
Confidence 86 5677889999999998864 4 79999999999999998532 334444 7899999999999999999999
Q ss_pred eCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEEEEE--CCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 385 GDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFASGG--ADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
+.||.+++|+.+.... ...+.....|...|.+++|+|.+..++++++ .|++|++||+.+...
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--------------- 313 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--------------- 313 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE---------------
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc---------------
Confidence 9999999999985322 2356778889999999999999888887754 699999999976621
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
....
T Consensus 314 --~~~~-------------------------------------------------------------------------- 317 (420)
T 4gga_A 314 --LSAV-------------------------------------------------------------------------- 317 (420)
T ss_dssp --EEEE--------------------------------------------------------------------------
T ss_pred --ceee--------------------------------------------------------------------------
Confidence 1000
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
.+...+.++.|+++++.+++++++.||.|+|||+.++
T Consensus 318 -------------------------------------------~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 318 -------------------------------------------DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp -------------------------------------------ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred -------------------------------------------ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 0012466777888888898887678999999999987
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
. ++.++.||.+.|++|+|+| ++.+||||+.|++|+|||+..
T Consensus 355 ~-------------------------~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 355 A-------------------------KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp C-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSC
T ss_pred c-------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCC
Confidence 6 7889999999999999999 788999999999998888753
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=301.35 Aligned_cols=310 Identities=16% Similarity=0.168 Sum_probs=242.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|.++|++++|+| ++++||+|+.||.|+|||+.+++. .....+.+|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 6 ~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKW--VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEE--EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcE--EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999 999999999999999999987641 1456677999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
++ ...+...+.+|...|.+++|+|++ .+|++|+.||.|++|++.....+........+|...|.+++|+|++.
T Consensus 83 ~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 155 (372)
T 1k8k_C 83 GR-----TWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV- 155 (372)
T ss_dssp TT-----EEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-
T ss_pred CC-----eeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-
Confidence 74 123344557899999999999998 89999999999999999987644333444567899999999999998
Q ss_pred EEEEEECCCeEEEEECCCC---------------CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVI---------------NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
+|++++.||.|++||++.. ....++..+ ..|...|.+++|+|++++|++++.||.|++||++
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-- 232 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-- 232 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG--
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC--
Confidence 6999999999999997521 123445555 6899999999999999999999999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC--CCchhH--------H-------HhhhhhccCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV--ERDSEI--------E-------QREAELKDLPS 461 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~--~~~~~~--------~-------~~~~~~~~~~~ 461 (812)
.++.+..+..|..+|.+++|+|++ .+|+++ .|+.|++|++.. +.-... . ...-...+...
T Consensus 233 -~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 233 -KKMAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp -GTTEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred -CCceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 467889999999999999999986 566666 899999999987 210000 0 00000000000
Q ss_pred ce-------EEe-ecCCCceeEEEEcCCCC---CEEEEEeCCCeEEEEe
Q psy4510 462 QL-------LFI-HLGQKEIKELHWHPQLP---GTIISTANSGFNIFRT 499 (812)
Q Consensus 462 ~~-------~~~-~~~~~~v~~~~~~p~~~---~~~~~~~~~~~~~~~~ 499 (812)
.. ... ..+...|.+++|++... .++++++.|+...+|.
T Consensus 310 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp ---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 11 111 24456899999886654 6888888777544443
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-33 Score=289.78 Aligned_cols=288 Identities=17% Similarity=0.247 Sum_probs=240.9
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+.+..+.+|.+.|++++| | ++++||+|+.||.|+|||+.+.. ....+..|...|.+++|+|++++|++++.++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQW----LGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSE----EEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred HHHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCE----EEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 4566677899999999999 8 99999999999999999997765 5667788999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.+++|++.... ..+++..+.+|...|.+++|. + .+|++|+.||.|++|| ... ....+..|...|.++
T Consensus 82 ~i~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~----~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 82 MINGVPLFATS----GEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGS----LVYNLQAHNASVWDA 148 (313)
T ss_dssp CEEEEETTCCT----TSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTE----EEEEEECCSSCEEEE
T ss_pred eEEEEEeeecC----CCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCc----EEEecccCCCceeEE
Confidence 99999998742 346678899999999999993 4 7999999999999999 332 456677899999999
Q ss_pred EEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 326 QWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 326 ~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
+|.| ++. +|++++.||.|++||.. .....+...|...|.+++|+|++. +++|+.||.|++||++ .++.+
T Consensus 149 ~~~~~~~~-~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~---~~~~~ 218 (313)
T 3odt_A 149 KVVSFSEN-KFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH---TGDVL 218 (313)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT---TCCEE
T ss_pred EEccCCCC-EEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC---chhhh
Confidence 9998 555 79999999999999943 234555345899999999999997 9999999999999998 56788
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
..+..|...|++++|+|++ .|++++.||.|++||+...+ .......+...|.+++|+|++.
T Consensus 219 ~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~- 279 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGS----------------LKQVITLPAISIWSVDCMSNGD- 279 (313)
T ss_dssp EEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCC----------------EEEEEECSSSCEEEEEECTTSC-
T ss_pred hhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCc----------------eeEEEeccCceEEEEEEccCCC-
Confidence 9999999999999999987 48899999999999998874 2233334455899999999976
Q ss_pred EEEEEeCCCeEEEEeCC
Q psy4510 485 TIISTANSGFNIFRTIS 501 (812)
Q Consensus 485 ~~~~~~~~~~~~~~~~~ 501 (812)
+++++.++.+.+|+...
T Consensus 280 ~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEEETTSCEEEEESCG
T ss_pred EEEEeCCCcEEEEeCCC
Confidence 55544455566666543
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-33 Score=295.33 Aligned_cols=307 Identities=17% Similarity=0.246 Sum_probs=232.8
Q ss_pred CCCCCceEEEEeCCCCCC-eEEEecC---CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC---CCcEEEeeCCC
Q psy4510 173 SGHLTEGFAMDWSSTEPG-VLATGDC---KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL---KTALQTVDDPF 245 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~-~lat~~~---dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~d~ 245 (812)
.+|.+.|++++|+| ++. ++++|+. ||.|+||++.+++. ......+|..+|.+++|+|+ +++|++++.|+
T Consensus 15 ~~h~~~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 15 KGFNYTVFDCKWVP-CSAKFVTMGNFARGTGVIQLYEIQHGDL---KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EECSSCEEEEEECT-TSSEEEEEEC--CCCEEEEEEEECSSSE---EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred cCCCCceEEEEEcC-CCceEEEecCccCCCcEEEEEeCCCCcc---cceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 47999999999999 775 6667776 99999999998763 22233479999999999999 69999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEe------cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW------SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
.|++|++.++ ..++..+.+|...|.+++| +|++ .+|++|+.||.|++||+.++.. ....+..|.
T Consensus 91 ~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~ 160 (357)
T 3i2n_A 91 NLHIWNLEAP------EMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDD---PVANMEPVQ 160 (357)
T ss_dssp CEEEECTTSC------SSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSS---CSEEECCCT
T ss_pred eEEEEeCCCC------CccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCC---cceeccccC
Confidence 9999999985 2488999999999999965 6777 7999999999999999998753 233333333
Q ss_pred ----CCEEEEE----EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC---CCCEEEEEeCCC
Q psy4510 320 ----NSVEDLQ----WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR---TEPLIVSGGDDG 388 (812)
Q Consensus 320 ----~~v~~~~----~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~sg~~dg 388 (812)
..|.+++ |+|++. +|++++.||.|++||++... .. .. ..|...|.+++|+| ++.+|++|+.||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~-~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMA---LR-WE-TNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTE---EE-EE-EECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred CCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCc---ee-ee-cCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 3899998 678888 69999999999999998533 22 22 57889999999999 889999999999
Q ss_pred cEEEEecCCCCCCCceE--EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCC---Cce
Q psy4510 389 CIHVWDLRRFKKGSSVA--TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLP---SQL 463 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~---~~~ 463 (812)
.|++||++.......+. .+..|...|++++|+|++..+|++++.||.|++||+..................+ ..+
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 99999998533222222 3448999999999999975589999999999999998764321100000000000 123
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEe
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRT 499 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~ 499 (812)
.....+...|.+++|+|+++.++++++.++ +.+|+.
T Consensus 315 ~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred eccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 333445568999999999988876677665 455554
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-32 Score=280.80 Aligned_cols=260 Identities=18% Similarity=0.285 Sum_probs=207.8
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCK 294 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~d 294 (812)
..+.+|...|++++|+|+|++|++++.|++|++|++... ..+++.++.+|.+.|.+++|+|+ + .+|++|+.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-----~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 76 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-----CBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-----CcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCC
Confidence 457799999999999999999999999999999999753 23678899999999999999864 5 799999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
++|++||+.++.. .....+.+|...|.+++|+|+ +. +|++++.||.|++||++...... ...+ .+|...|+++
T Consensus 77 ~~v~iWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~-~~~~-~~h~~~v~~~ 151 (297)
T 2pm7_B 77 GKVMIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS-PIII-DAHAIGVNSA 151 (297)
T ss_dssp TEEEEEEBSSSCB--CCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC-CEEE-ECCSSCEEEE
T ss_pred CEEEEEEcCCCce--EEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee-eeee-ecccCccceE
Confidence 9999999987641 124456789999999999997 66 79999999999999998643221 2333 6899999999
Q ss_pred EEcCC-------------CCEEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCC--CcEEEEEECCCCE
Q psy4510 373 SWNRT-------------EPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTE--SSTFASGGADDQI 436 (812)
Q Consensus 373 ~~~~~-------------~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~v 436 (812)
+|+|+ +++|++|+.|+.|++||++.... ......+.+|...|.+++|+|++ ..+|++++.|++|
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 99997 46999999999999999974211 11456788999999999999985 4799999999999
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEe--ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFI--HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
++||+...... ...... ..+...|.+++|+|++..++.++.++.+.+|...
T Consensus 232 ~iWd~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 232 IIWTQDNEQGP-------------WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEESSTTSC-------------CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEeCCCCCc-------------cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999764210 011111 2334579999999998766555555567777654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=310.91 Aligned_cols=258 Identities=13% Similarity=0.141 Sum_probs=204.7
Q ss_pred CCccCc-CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 167 PPLFSF-SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 167 ~~i~~~-~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
+.+.++ .+|.+.|++++|+|.++++||||+.||+|+|||+.+........ ....+|...|++++|+|++++|++++.|
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 456666 78999999999999788999999999999999987621111111 1222699999999999999999999999
Q ss_pred CceEEeeCC---CCCCCCCCCCCceEEcC------------CCCcEEEEE--ecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 245 FQLAEHNKK---RGKGPGIPTPPLFSFSG------------HLTEGFAMD--WSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 245 ~~i~vwd~~---~~~~~~~~~~~~~~~~~------------h~~~v~~l~--~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
+.|++|++. .+ +.+..+.+ +...+.++. +++++ .+|++|+.||.|++||+.++.
T Consensus 133 g~i~vwd~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~- 203 (437)
T 3gre_A 133 GQIIVLKVNHYQQE-------SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLE- 203 (437)
T ss_dssp SEEEEEEEEEEEET-------TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCC-
T ss_pred CEEEEEEeccccCC-------ceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCe-
Confidence 999999995 32 33333332 344555555 45666 799999999999999999887
Q ss_pred ceeccccccC--CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC----CCCEE
Q psy4510 308 WQVDQKPLVG--HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR----TEPLI 381 (812)
Q Consensus 308 ~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~~~l 381 (812)
....+.+ |...|++++|+|++. +|++|+.||.|++||++. ..++..+...|...|++++|+| ++.+|
T Consensus 204 ---~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l 276 (437)
T 3gre_A 204 ---RLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF---NVLIRSWSFGDHAPITHVEVCQFYGKNSVIV 276 (437)
T ss_dssp ---EEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT---TEEEEEEBCTTCEEEEEEEECTTTCTTEEEE
T ss_pred ---eeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC---ccEEEEEecCCCCceEEEEeccccCCCccEE
Confidence 4566666 889999999999988 699999999999999984 4555655447788999996665 56699
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEccc--------------------------CCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKH--------------------------HTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
++|+.||.|++||++. ++.+..+.+ |...|++++|+ ++ .+|++|+.|+.
T Consensus 277 ~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~ 351 (437)
T 3gre_A 277 VGGSSKTFLTIWNFVK---GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSS 351 (437)
T ss_dssp EEESTTEEEEEEETTT---TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTE
T ss_pred EEEcCCCcEEEEEcCC---CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCe
Confidence 9999999999999984 444554443 55668888998 44 69999999999
Q ss_pred EEEEEcCCCC
Q psy4510 436 IALWDLAVER 445 (812)
Q Consensus 436 v~iwd~~~~~ 445 (812)
|++||+...+
T Consensus 352 i~~wd~~~~~ 361 (437)
T 3gre_A 352 IVMFSLNELS 361 (437)
T ss_dssp EEEEETTCGG
T ss_pred EEEEECCCcc
Confidence 9999998774
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=284.18 Aligned_cols=283 Identities=20% Similarity=0.340 Sum_probs=230.3
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
.++|+||+++ .||+| .|++|+|||+.++ +.+..+ .+|...|.+++|+|++ .+|++|+.||+|++|++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg-------~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~ 97 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSG-------DILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQ 97 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTC-------CEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCC-------CEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecC
Confidence 5789999886 56655 5999999999986 545544 5788899999999999 899999999999999999
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
+++ ....+.+|...+.++.+.+ . ++++++.++.+++|+..... ..+..+ .+|...+.++.+++++++|++
T Consensus 98 ~~~----~~~~~~~h~~~~~~~~~~~--~-~l~s~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 98 QQK----RLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp TTE----EEEEEECCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEE
T ss_pred Cce----eEEEecCccceEEEeecCC--C-EEEEEecCCceEeeecCCCc--eeEEEE-cCccCceEEEEEcCCCCEEEE
Confidence 887 5677889999888877654 4 79999999999999988532 233444 789999999999999999999
Q ss_pred EeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEE--EEECCCCEEEEEcCCCCchhHHHhhhhhccCC
Q psy4510 384 GGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFA--SGGADDQIALWDLAVERDSEIEQREAELKDLP 460 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 460 (812)
++.||.|++||++..+. .........|.+.|.++.++|.+..++. +++.++.|++||......
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-------------- 233 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-------------- 233 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE--------------
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc--------------
Confidence 99999999999985332 2345566778899999999998877664 455688999999876521
Q ss_pred CceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceE
Q psy4510 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540 (812)
Q Consensus 461 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~ 540 (812)
..
T Consensus 234 ---~~--------------------------------------------------------------------------- 235 (318)
T 4ggc_A 234 ---LS--------------------------------------------------------------------------- 235 (318)
T ss_dssp ---EE---------------------------------------------------------------------------
T ss_pred ---cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccc
Q psy4510 541 FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620 (812)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~ 620 (812)
...+...+..+.|+|+++.+++++++.|+.|++||+.+
T Consensus 236 ------------------------------------------~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 236 ------------------------------------------AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp ------------------------------------------EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ------------------------------------------cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 01112256677888888888887667899999999998
Q ss_pred cccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 621 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
+. ++.++.+|.+.|++++|+| ++.+|||||.||+|+|||+..
T Consensus 274 ~~-------------------------~~~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 274 MA-------------------------KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CC-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSC
T ss_pred Cc-------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCC
Confidence 76 7889999999999999999 788999999999999999854
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=304.90 Aligned_cols=265 Identities=9% Similarity=0.085 Sum_probs=199.3
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.-...|.+++||| ||+++||++.|++|+ |... .+.+.+|...|.+++|+|+| .++.+.+|+.+
T Consensus 13 ~~~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~-------~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~ 75 (588)
T 2j04_A 13 EFEDWKNNLTWAR-DGTLYLTTFPDISIG--QPKY-------AKDINCNSKNLFHVKEFPLE-------FENKLDFELAQ 75 (588)
T ss_dssp CCSSSSCCEEECT-TSCEEEECSSSEEEE--EECC-------CSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC
T ss_pred HhhccEEEEEECC-CCCEEEEEcCCceee--cccc-------cceecCCCccEEEEEECCCC-------CcceEEEEeCC
Confidence 4457789999999 999999999999999 5333 23457999999999999999 45555555433
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-----CEEEEEEc
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN-----SVEDLQWS 328 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-----~v~~~~~~ 328 (812)
. ..+.++ +|...|.+++|||+| .+||+++.||.|++|+... ....+. |.. .|.+++|+
T Consensus 76 ~--------~~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafS 138 (588)
T 2j04_A 76 Q--------NGLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWN 138 (588)
T ss_dssp S--------SCSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEEC
T ss_pred C--------ceEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEc
Confidence 2 222222 458899999999999 8999999999999999543 233344 554 59999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCccc----ceeec---CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKS----CMLTL---PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~---~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
|+|+ +||+|+.||+|+|||+..+.... .+.++ ..+|...|.+++|+|+| +++++.|+.|++||+......
T Consensus 139 PDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC
T ss_pred CCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc
Confidence 9999 69999999999999998643211 12333 26688999999999999 888899999999999752211
Q ss_pred CceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce-EEeecCCCceeEEEE-
Q psy4510 402 SSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL-LFIHLGQKEIKELHW- 478 (812)
Q Consensus 402 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~- 478 (812)
....++ .+|...|.+++|+ + +.||+++ +++|++||+... +. .+...+...|..+.|
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~-----------------~~~~~~~gh~~~V~~va~~ 274 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNY-----------------SISSLKTGSLENFHIIPLN 274 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTT-----------------EEEEEECSCCSCCCEEEET
T ss_pred cceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCC-----------------eEEEEEcCCCceEEEEEee
Confidence 134566 4788999999999 4 6888887 699999999877 33 334355567888888
Q ss_pred -cCCCCCEEEEEeCCCeEEE
Q psy4510 479 -HPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 479 -~p~~~~~~~~~~~~~~~~~ 497 (812)
+|++ ..++++..+|..+|
T Consensus 275 ~s~d~-~~La~a~edG~klw 293 (588)
T 2j04_A 275 HEKES-TILLMSNKTSYKVL 293 (588)
T ss_dssp TCSSC-EEEEECSSCEEEEE
T ss_pred eCCCC-CEEEEEcCCCCEEE
Confidence 7775 24444444444343
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=296.16 Aligned_cols=242 Identities=20% Similarity=0.386 Sum_probs=200.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
+..++||+ + ++||+|. |++|+|||+.+++.. ....+.+|...|++|+|+|+|++|++|+.|+.|++|++.++
T Consensus 108 ~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~--~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--- 179 (420)
T 4gga_A 108 LNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--- 179 (420)
T ss_dssp CBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---
T ss_pred ceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEE--EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---
Confidence 45699998 5 5888886 899999999988732 23345688899999999999999999999999999999985
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+++..+.+|...+.+++|++ .+|++|+.|+.+++|+...... ....+.+|...+..+.|+|++. +++++
T Consensus 180 ----~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~---~~~~~~~h~~~~~~~~~~~~g~-~l~s~ 248 (420)
T 4gga_A 180 ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLRWAPDGR-HLASG 248 (420)
T ss_dssp ----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred ----cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce---eeEEecccccceeeeeecCCCC-eeeee
Confidence 78899999999999999875 6899999999999999987653 4566789999999999999999 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEE--eCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSG--GDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+.|+.|++|+.+..............|...|.+++|+|.+. +++++ +.|+.|++||++ .+..+..+.. ...+.
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~---t~~~~~~~~~-~~~v~ 324 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSAVDA-HSQVC 324 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT---TTEEEEEEEC-SSCEE
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC---ccccceeecc-cccee
Confidence 99999999999865443333333378899999999999875 66654 579999999998 4666666664 45789
Q ss_pred EEEEccCCCcEEEEEE--CCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGG--ADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~ 444 (812)
++.|+|++. .+++++ .|+.|++||+.+.
T Consensus 325 ~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 325 SILWSPHYK-ELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp EEEEETTTT-EEEEEECTTTCCEEEEETTTC
T ss_pred eeeecCCCC-eEEEEEecCCCEEEEEECCCC
Confidence 999999975 555543 6899999998765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=291.16 Aligned_cols=295 Identities=11% Similarity=0.058 Sum_probs=216.6
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCC-------ceEEeeCCCCCCCCC---CCCCceEEcCCCCcEEEEEecCCCCCEEEEE-
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPF-------QLAEHNKKRGKGPGI---PTPPLFSFSGHLTEGFAMDWSSTEPGVLATG- 291 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~-------~i~vwd~~~~~~~~~---~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg- 291 (812)
..||++++|+|++++|++|+.+. .|++|++..+..... .......+.+|...+.++++++ ..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGC 90 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEEC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEE
Confidence 45899999999999999997543 599999876421000 0001134678888888888765 355554
Q ss_pred ----------eCCCcEEEEeCCCCCcceec-----cccccCCCCCEEEEEEcCCCCeEEE--EEECCCeEEEEECCCCCc
Q psy4510 292 ----------DCKRNIHIWTPREAGAWQVD-----QKPLVGHTNSVEDLQWSPGEKRVLA--SCSVDLSIRIWDTRVINT 354 (812)
Q Consensus 292 ----------~~dg~i~vwd~~~~~~~~~~-----~~~~~~h~~~v~~~~~~p~~~~~l~--s~~~dg~i~iwd~~~~~~ 354 (812)
+.|+++++|++......... ......+...+.+++|+|+|+. ++ +++.|++|+|||+++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~-la~as~~~d~~i~iwd~~~--- 166 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV-AAIASSKVPAIMRIIDPSD--- 166 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC-EEEEESCSSCEEEEEETTT---
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE-EEEEECCCCCEEEEeECCC---
Confidence 45788999998765431111 1122345567999999999995 44 445799999999984
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce--EEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..++..+ .|...|.+++|+|+|++|++++.++ +++|+... +..+ .....|...|.+++|+|++ .++++++.
T Consensus 167 ~~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~---~~~~~~~~~~~~~~~v~~v~fspdg-~~l~~~s~ 239 (365)
T 4h5i_A 167 LTEKFEI--ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVT---GSCIARKTDFDKNWSLSKINFIADD-TVLIAASL 239 (365)
T ss_dssp TEEEEEE--ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTT---CCEEEEECCCCTTEEEEEEEEEETT-EEEEEEEE
T ss_pred CcEEEEe--CCCCceEEEEEccCCceEEecccee-EEEEEecc---CcceeeeecCCCCCCEEEEEEcCCC-CEEEEEec
Confidence 4445555 4778899999999999999998665 66666553 3333 3456788899999999997 68888887
Q ss_pred CC----CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 433 DD----QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 433 dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
|+ .+++|++..... ..
T Consensus 240 d~~~~~~i~~~~~~~~~~-----------------~~------------------------------------------- 259 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNT-----------------SV------------------------------------------- 259 (365)
T ss_dssp SSSCCEEEEEEEEETTEE-----------------EE-------------------------------------------
T ss_pred CCcceeEEeeccccccee-----------------cc-------------------------------------------
Confidence 76 466676544310 00
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccc
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRG 588 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 588 (812)
.....+.+|..
T Consensus 260 ---------------------------------------------------------------------~~~~~~~~~~~ 270 (365)
T 4h5i_A 260 ---------------------------------------------------------------------LRSKQVTNRFK 270 (365)
T ss_dssp ---------------------------------------------------------------------EEEEEEESSCS
T ss_pred ---------------------------------------------------------------------eeeeeecCCCC
Confidence 00123455667
Q ss_pred eEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeee-ecCCCCceEEEEeCCC
Q psy4510 589 CINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFAMDWSST 667 (812)
Q Consensus 589 ~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~~sp~ 667 (812)
.|++++|+|+|++|++| +.|++|+|||+.+++ ++.. +.+|...|++|+|||
T Consensus 271 ~V~~~~~Spdg~~lasg--s~D~~V~iwd~~~~~-------------------------~~~~~~~gH~~~V~~v~fSp- 322 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLA--SNDNSIALVKLKDLS-------------------------MSKIFKQAHSFAITEVTISP- 322 (365)
T ss_dssp CEEEEEECTTSCEEEEE--ETTSCEEEEETTTTE-------------------------EEEEETTSSSSCEEEEEECT-
T ss_pred CeEeEEECCCCCceEEE--cCCCEEEEEECCCCc-------------------------EEEEecCcccCCEEEEEECC-
Confidence 89999999999999999 899999999999876 5665 589999999999999
Q ss_pred CCCeEEecCCCceEEEEecCC
Q psy4510 668 EPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~ 688 (812)
++++|||||.|++||||++..
T Consensus 323 dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 323 DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEeCCCeEEEEEcCC
Confidence 888999999999999999854
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=306.79 Aligned_cols=317 Identities=14% Similarity=0.195 Sum_probs=230.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-------ccccccccCCCC------------CCeeeeeEcCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------WQVDQKPLGGHT------------NSAEDLQWSDL 234 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-------~~~~~~~l~~h~------------~~V~~l~~s~~ 234 (812)
.|.+.|++++|+| ++++||+|+.||.|+||++.+... .......+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 4678999999999 999999999999999999987652 112356778998 89999999999
Q ss_pred C--CcEEEeeCCCceEEeeCCCCCCC--------------------CCCC------------CCceE-EcCCCCcEEEEE
Q psy4510 235 K--TALQTVDDPFQLAEHNKKRGKGP--------------------GIPT------------PPLFS-FSGHLTEGFAMD 279 (812)
Q Consensus 235 ~--~~l~s~~~d~~i~vwd~~~~~~~--------------------~~~~------------~~~~~-~~~h~~~v~~l~ 279 (812)
+ .+|++++.|+.|++|++..+... .... .+... ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 78999999999999998763100 0000 00112 368999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCCCCCccee----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQV----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
|+|++ .+|++| .|+.|++||+........ ....+.+|...|++++|+|++..+|++|+.||.|++||+++....
T Consensus 185 ~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 99998 789998 799999999985432110 012467899999999999998448999999999999999865421
Q ss_pred c-ceeecCCcCCC------------CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC---------
Q psy4510 356 S-CMLTLPNAHTS------------DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP--------- 413 (812)
Q Consensus 356 ~-~~~~~~~~~~~------------~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~--------- 413 (812)
. .+..+ ..|.. .|.+++|+|++++|++++. |.|++||++. .+.++..+..|...
T Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~--~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 263 DRHSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM--ENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp CTTCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC--CSSCSCCEESCGGGTTTHHHHHH
T ss_pred cceeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC--Cccccceeecccccccccccccc
Confidence 1 13344 55554 8999999999999999999 9999999985 35677777777532
Q ss_pred ------EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh---hhccCCCceEE-------------eecCCC
Q psy4510 414 ------VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA---ELKDLPSQLLF-------------IHLGQK 471 (812)
Q Consensus 414 ------v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~ 471 (812)
+..++|+|++ .+|++|+.||.|++||+.+.+......... .....++.... ......
T Consensus 339 ~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp TSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred ccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 3359999997 689999999999999998875321000000 00000000000 112234
Q ss_pred ceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 472 EIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.|..++|+|+++ ++++++.+++.+|..
T Consensus 418 ~i~~~~~~p~~~-~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 418 KILHTAWHPKEN-IIAVATTNNLYIFQD 444 (447)
T ss_dssp CCCEEEECSSSS-EEEEECSSCEEEEEC
T ss_pred ceeEEEECCCCC-EEEEEecceeeeecc
Confidence 689999999985 666777778877753
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-33 Score=296.04 Aligned_cols=263 Identities=16% Similarity=0.237 Sum_probs=219.5
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPF 245 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~ 245 (812)
.+..+.||.+.|++++|+| ++++||+|+.||.|+||++..... .....+.+|...|++++|+++ +++|++++.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp --CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcc--eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3455679999999999999 999999999999999999974321 255678899999999999987 99999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.|++||+.++ ....+..+.+|...|.+++|+|+ + .+|++|+.||.|++||+...... ....+.+|...|.
T Consensus 80 ~v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 80 KVLIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVN 151 (379)
T ss_dssp CEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCC--CEEEEECCTTCEE
T ss_pred EEEEEEcCCC-----ceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCce--eeEEecCCCCceE
Confidence 9999999885 22377888899999999999999 6 89999999999999999887421 2345678999999
Q ss_pred EEEEcC-------------CCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCC---CCEEEEEeC
Q psy4510 324 DLQWSP-------------GEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRT---EPLIVSGGD 386 (812)
Q Consensus 324 ~~~~~p-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~ 386 (812)
+++|+| ++. +|++++.||.|++||++...... ....+ .+|...|.+++|+|+ +++|++|+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred EEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEE-ecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 999999 466 79999999999999998654332 23344 789999999999999 889999999
Q ss_pred CCcEEEEecCCCCCCCceEEc--ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATF--KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
||.|++||++..........+ ..|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEET
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCCC
Confidence 999999999853222223333 3488999999999997 58999999999999999855
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-33 Score=298.62 Aligned_cols=297 Identities=12% Similarity=0.218 Sum_probs=232.3
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..++++|....++++|+.||.|+||++............+.+|...|++++|+| ++++|++++.|+.|++|++.++...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 358888833345667899999999999775543335667889999999999999 9999999999999999999885322
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc--cCCCCCEEEEEEcCCCCeEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.....++..+.+|...|.+++|+|++..+|++|+.||.|++||+.++. ....+ .+|...|.+++|+|++. +|+
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 192 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----AVLTLGPDVHPDTIYSVDWSRDGA-LIC 192 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----EEEEECTTTCCSCEEEEEECTTSS-CEE
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----ccEEEecCCCCCceEEEEECCCCC-EEE
Confidence 112267889999999999999999986799999999999999999876 45556 78999999999999998 599
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEecCCCCCCCceEEc-ccCC
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNRTEPLIVSG---GDDGCIHVWDLRRFKKGSSVATF-KHHT 411 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg---~~dg~i~iwd~~~~~~~~~~~~~-~~h~ 411 (812)
+++.||.|++||+++ ...+..+...|... +.+++|+|++.+|++| +.|+.|++||++... .++... ..|.
T Consensus 193 ~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~ 267 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRK---GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE--EPLSLQELDTS 267 (402)
T ss_dssp EEETTSEEEEEETTT---TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS--SCSEEEECCCC
T ss_pred EEecCCcEEEEeCCC---CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc--CCceEEeccCC
Confidence 999999999999985 33444443466655 8999999999999999 789999999998633 223333 2477
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..|.+++|+|++..++++++.|+.|++||+...+.. ...+..+.+...|.+++|+|++..+ +++.
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~-------------~~~l~~~~~~~~v~~~~~sp~~~~~--~s~~ 332 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF-------------LHYLSMFSSKESQRGMGYMPKRGLE--VNKC 332 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC-------------EEEEEEECCSSCCSEEEECCGGGSC--GGGT
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc-------------eEeecccccCCcccceEEecccccc--eecc
Confidence 889999999998544456667999999999877410 1334445556789999999996433 3344
Q ss_pred CCeEEEEeCC
Q psy4510 492 SGFNIFRTIS 501 (812)
Q Consensus 492 ~~~~~~~~~~ 501 (812)
+.+.+|....
T Consensus 333 ~~~~~~~l~~ 342 (402)
T 2aq5_A 333 EIARFYKLHE 342 (402)
T ss_dssp EEEEEEEEET
T ss_pred eeEEEEEcCC
Confidence 4566666544
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-32 Score=288.21 Aligned_cols=268 Identities=16% Similarity=0.219 Sum_probs=221.5
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEE
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAE 249 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~v 249 (812)
+.||.+.|++++|+| ++++||+|+.||.|+||++.+..........+.+|...|++++|+| ++++|++++.|+.|++
T Consensus 7 ~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp ECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred CcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 358999999999999 9999999999999999999987654446677889999999999999 6999999999999999
Q ss_pred eeCCCCCCCC--CCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCccee---------cccccc
Q psy4510 250 HNKKRGKGPG--IPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQV---------DQKPLV 316 (812)
Q Consensus 250 wd~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~---------~~~~~~ 316 (812)
|++..+.... ...+++..+.+|...|.+++|+|+ + .+|++|+.||.|++||+.++..... ......
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9998752110 011447788899999999999998 7 8999999999999999988763110 001123
Q ss_pred CCCCCEEEEEEcCC---CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC----CEEEEEeCCCc
Q psy4510 317 GHTNSVEDLQWSPG---EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE----PLIVSGGDDGC 389 (812)
Q Consensus 317 ~h~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----~~l~sg~~dg~ 389 (812)
+|...+.+++|+|+ +. +|++++.++.+.+|+..... ...+..+ .+|...|++++|+|++ ++|++|+.||.
T Consensus 165 ~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGK-LHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSC-EEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred CcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCc-eeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 68889999999997 55 79999999999888876432 2234445 7899999999999998 79999999999
Q ss_pred EEEEecCCCC-------------------------------------------CCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 390 IHVWDLRRFK-------------------------------------------KGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 390 i~iwd~~~~~-------------------------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|++||++... ....+..+.+|...|++++|+|++ .+
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~ 320 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG-TI 320 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS-CC
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC-CE
Confidence 9999997421 014667788899999999999987 69
Q ss_pred EEEEECCCCEEEEEcCCCC
Q psy4510 427 FASGGADDQIALWDLAVER 445 (812)
Q Consensus 427 l~s~~~dg~v~iwd~~~~~ 445 (812)
|++++.||.|++||+...+
T Consensus 321 l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEETTSCEEEEEECTTS
T ss_pred EEEecCCCcEEEEecCcCc
Confidence 9999999999999998774
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=298.60 Aligned_cols=332 Identities=19% Similarity=0.297 Sum_probs=237.8
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-------ceeccccccCCC------------CCEEEEEEcCC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------WQVDQKPLVGHT------------NSVEDLQWSPG 330 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-------~~~~~~~~~~h~------------~~v~~~~~~p~ 330 (812)
.|.+.|.+++|+|++ .+||+|+.||.|+||++.++.. .......+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 367899999999998 8999999999999999987651 111255677898 88999999999
Q ss_pred CC-eEEEEEECCCeEEEEECCCCCcc------------------------------------cceeecCCcCCCCeEEEE
Q psy4510 331 EK-RVLASCSVDLSIRIWDTRVINTK------------------------------------SCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 331 ~~-~~l~s~~~dg~i~iwd~~~~~~~------------------------------------~~~~~~~~~~~~~v~~l~ 373 (812)
+. ..|++++.||.|++||+...... .+...+..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 83 26999999999999998742210 011123368999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceE-------EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-------TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-------~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
|+|++++|++| .||.|++||++. ....+. .+.+|...|++++|+|++..+|++|+.||.|++||++....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEI--TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTE--EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCC--CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999999998 799999999974 223333 36789999999999999767999999999999999987631
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCC
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
.. ..+.. + .-+..
T Consensus 262 ~~----------------------~~~~~---------------------~-----------------------~~~~~- 274 (447)
T 3dw8_B 262 CD----------------------RHSKL---------------------F-----------------------EEPED- 274 (447)
T ss_dssp SC----------------------TTCEE---------------------E-----------------------CCC---
T ss_pred cc----------------------ceeeE---------------------e-----------------------ccCCC-
Confidence 00 00000 0 00000
Q ss_pred CCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEe
Q psy4510 527 PGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 527 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
+.....+..|...|.+++|+|++++|+++
T Consensus 275 --------------------------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~- 303 (447)
T 3dw8_B 275 --------------------------------------------------PSNRSFFSEIISSISDVKFSHSGRYMMTR- 303 (447)
T ss_dssp -----------------------------------------------------CCHHHHHTTCEEEEEECTTSSEEEEE-
T ss_pred --------------------------------------------------ccccccccccCceEEEEEECCCCCEEEEe-
Confidence 00011234566799999999999999988
Q ss_pred ecCcceEEEEeccc-cccccCCcccccccccccCCCCCCCCCCeeeecCCCCc---------------eEEEEeCCCCCC
Q psy4510 607 WGEVGKVGIWDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE---------------GFAMDWSSTEPG 670 (812)
Q Consensus 607 ~~~dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~---------------V~~l~~sp~~~~ 670 (812)
+. +.|++||+.. +. ++..+.+|... +..++|+| ++.
T Consensus 304 -~~-~~v~iwd~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~ 355 (447)
T 3dw8_B 304 -DY-LSVKVWDLNMENR-------------------------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDS 355 (447)
T ss_dssp -ES-SEEEEEETTCCSS-------------------------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSS
T ss_pred -eC-CeEEEEeCCCCcc-------------------------ccceeeccccccccccccccccccccceEEEECC-CCC
Confidence 66 9999999986 43 55667777532 34599999 788
Q ss_pred eEEecCCCceEEEEecCCCceeEEEEecC--------CCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeE
Q psy4510 671 VLATGDCKRNIHIWTPREAGAWSVYLYTN--------RFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 742 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~~~~~~~~s~--------dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~ 742 (812)
+|++++.||.|++||+.+++...+..... ..+.+..++.. .... .......+...|.+++
T Consensus 356 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 356 VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKR---------KKDE---ISVDSLDFNKKILHTA 423 (447)
T ss_dssp EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCC---------CTTC---EEGGGCCTTSCCCEEE
T ss_pred EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCc---------cccc---ccccccccCCceeEEE
Confidence 99999999999999999988775543111 01122222111 1111 1112234567899999
Q ss_pred EecCCceeEEeeccCCceEEeee
Q psy4510 743 WSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 743 fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
|+|++. +||+++.++ +.+|.-
T Consensus 424 ~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 424 WHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp ECSSSS-EEEEECSSC-EEEEEC
T ss_pred ECCCCC-EEEEEecce-eeeecc
Confidence 999999 899888776 777754
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=294.74 Aligned_cols=316 Identities=23% Similarity=0.440 Sum_probs=247.4
Q ss_pred CceEEEEeCCCCC----------CeEEEecC----CCcEEEEccCC-----------------------CCccccccccc
Q psy4510 177 TEGFAMDWSSTEP----------GVLATGDC----KRNIHIWTPRE-----------------------AGAWQVDQKPL 219 (812)
Q Consensus 177 ~~i~~~~~sp~~~----------~~lat~~~----dg~v~iwd~~~-----------------------~~~~~~~~~~l 219 (812)
-+..++.|.| +. .+|+.|+. ...|.|+++.- ..........+
T Consensus 46 wp~l~~~~~p-~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 124 (430)
T 2xyi_A 46 WPSLTAQWLP-DVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIK 124 (430)
T ss_dssp SCCSCEEECS-CCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEE
T ss_pred CCceEEEECc-ccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEE
Confidence 4567788888 43 45777653 35677776530 01111223456
Q ss_pred CCCCCCeeeeeEcCC-CCcEEEeeCCCceEEeeCCCCCCC---CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 220 GGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGP---GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~-~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
..|.+.|++++|+|+ +.+|++++.+|.|++|++...... .....++..+.+|...|++|+|+|++..+|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 789999999999997 689999999999999999762100 0124788899999999999999999856999999999
Q ss_pred cEEEEeCCCCCcc---eeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 296 NIHIWTPREAGAW---QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 296 ~i~vwd~~~~~~~---~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++...... ......+.+|...|.+++|+|++..+|++++.||.|++||++.......+..+ ..|...|+++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i 283 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVNCL 283 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSCEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCCeEEE
Confidence 9999999885421 11245567899999999999966668999999999999999975434455555 6899999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+|+|+++ +|++|+.||.|++||++. ...++..+..|...|++++|+|++..+|++++.|+.|++||+.......
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~--~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~--- 358 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ--- 358 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTC--TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC---
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCC--CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc---
Confidence 9999997 899999999999999996 3567889999999999999999987899999999999999998743211
Q ss_pred hhhhhccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEEeCCCe-EEEEe
Q psy4510 452 REAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGF-NIFRT 499 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~-~~~~~ 499 (812)
........++++++.+.++. .|.+++|+|++++++++++.++. .+|+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 11123445667888887765 69999999999988888888875 55554
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-31 Score=277.19 Aligned_cols=242 Identities=20% Similarity=0.357 Sum_probs=197.9
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..+++||+ ++ +||+|. |++|+|||+.+++.. ....+.+|...|++++|+|++++|++|+.|+.|++|++.++
T Consensus 28 ~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~--~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--- 99 (318)
T 4ggc_A 28 LNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--- 99 (318)
T ss_dssp CBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT---
T ss_pred ceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEE--EEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc---
Confidence 35699999 65 888876 899999999988732 22345688899999999999999999999999999999985
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+++..+.+|...+.++.+.+ .++++|+.++.+++|+...... ....+.+|...+..+.|+++++ +|+++
T Consensus 100 ----~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~l~s~ 168 (318)
T 4ggc_A 100 ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLRWAPDGR-HLASG 168 (318)
T ss_dssp ----EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred ----eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce---eEEEEcCccCceEEEEEcCCCC-EEEEE
Confidence 78889999999998877654 6899999999999999887653 4566788999999999999998 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-E--EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-L--IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~--l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+.||.|++||++++............+...|.+++++|.+. . +++|+.++.|++||.+. .. ......+...+.
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~---~~-~~~~~~~~~~v~ 244 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GA-CLSAVDAHSQVC 244 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT---CC-EEEEEECSSCEE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc---cc-ccccccceeeee
Confidence 99999999999876544333333367888999999999876 3 35667889999999973 33 344455778899
Q ss_pred EEEEccCCCcEEEEE--ECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASG--GADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~--~~dg~v~iwd~~~~ 444 (812)
.+.|+|.+. .++++ +.|+.|++||+.+.
T Consensus 245 ~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 245 SILWSPHYK-ELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp EEEEETTTT-EEEEEECTTTCCEEEEETTTC
T ss_pred eeeeccccc-ceEEEEEcCCCEEEEEECCCC
Confidence 999999975 44443 37999999998765
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=285.97 Aligned_cols=264 Identities=21% Similarity=0.318 Sum_probs=202.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEe
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~ 292 (812)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.++ ...++..+.+|.+.|.+++|+|. + .+|++|+
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~-----~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s 78 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG-----GQILIADLRGHEGPVWQVAWAHPMYG-NILASCS 78 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT-----EEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEE
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC-----CcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEE
Confidence 34567799999999999999999999999999999999874 12356789999999999999864 5 7999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 370 (812)
.|++|++||+.++.. .....+.+|...|++++|+|+ +. +|++|+.||.|++||++...... ......+|...|.
T Consensus 79 ~D~~v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 79 YDRKVIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCN 154 (316)
T ss_dssp TTSCEEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBC
T ss_pred CCCEEEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcc
Confidence 999999999987631 123457789999999999998 55 69999999999999998542221 1233378999999
Q ss_pred EEEEcCC-----------------CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC---CcEEEEE
Q psy4510 371 VISWNRT-----------------EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE---SSTFASG 430 (812)
Q Consensus 371 ~l~~~~~-----------------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~---~~~l~s~ 430 (812)
+++|+|+ +++|++|+.|+.|++||++.......+..+.+|...|.+++|+|++ ..+|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 9999997 3689999999999999997421124677889999999999999985 3689999
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
+.|++|++|++...... ......+ ..+...|.+++|+|++..++.++.++.+.+|+..
T Consensus 235 s~D~~v~iw~~~~~~~~----------~~~~~~~--~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSN----------TWSPKLL--HKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCEEEEEECSSTTCC----------CCBCCEE--EECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCeEEEEEccCcccc----------chhhhhh--hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999999763110 0001222 3345689999999998766555556667777653
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-32 Score=284.43 Aligned_cols=281 Identities=9% Similarity=0.036 Sum_probs=230.1
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEe
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEH 250 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vw 250 (812)
..+|.+.|++++|+| ++++||+|+.||.|+||++.+..... ....+.+|...|.+++|+|+++ +|++++.++.|++|
T Consensus 7 ~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNV-DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEE-EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccc-cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 348999999999999 99999999999999999998765221 2344558999999999999999 99999999999999
Q ss_pred eC-CCCCCCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC---------CCcceeccccccCC
Q psy4510 251 NK-KRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---------AGAWQVDQKPLVGH 318 (812)
Q Consensus 251 d~-~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~---------~~~~~~~~~~~~~h 318 (812)
++ .++ ....+.+ |...|.+++|+| + .+|++++.|+.|++||+.+ .. ....+. |
T Consensus 85 d~~~~~--------~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~-~ 149 (342)
T 1yfq_A 85 DLIGSP--------SFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNL----NSNNTK-V 149 (342)
T ss_dssp CSSSSS--------SEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEES----CSSSSS-S
T ss_pred EeccCC--------ceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCC----eeeEEe-e
Confidence 99 763 3477888 999999999999 6 8999999999999999986 43 344444 8
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC-CCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecC
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV-INTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~ 396 (812)
...|.+++|+|++ +++++.|+.|++||++. .... .......|...|.+++|+| +++++++|+.||.|++|+++
T Consensus 150 ~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 150 KNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDN--GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp CCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCC--CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred CCceEEEEecCCc---EEEEeCCCeEEEEECCcccccc--ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 8999999999876 88999999999999986 3322 2222257888999999999 99999999999999999998
Q ss_pred CCC---CCCceEEcccCCC---------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 397 RFK---KGSSVATFKHHTA---------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 397 ~~~---~~~~~~~~~~h~~---------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
... ....+..+..|.. .|.+++|+|++ .+|++++.||.|++||+...+ .+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~----------------~~~ 287 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRK----------------KIK 287 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE----------------EEE
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCccHh----------------Hhh
Confidence 520 0267778888765 99999999987 589999999999999998773 222
Q ss_pred EeecC-CCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 465 FIHLG-QKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 465 ~~~~~-~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
....+ ...|.+++ |++. .+++++.++.
T Consensus 288 ~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~ 315 (342)
T 1yfq_A 288 NFAKFNEDSVVKIA--CSDN-ILCLATSDDT 315 (342)
T ss_dssp ECCCCSSSEEEEEE--ECSS-EEEEEEECTH
T ss_pred hhhcccCCCceEec--CCCC-eEEEEecCCc
Confidence 23333 56799998 7764 6666666664
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-31 Score=287.50 Aligned_cols=285 Identities=21% Similarity=0.367 Sum_probs=227.6
Q ss_pred CCCCCceE--EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 173 SGHLTEGF--AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 173 ~gh~~~i~--~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
.+|.+.+. ++.|++ ..+++++.||.|+||++.++.. ...+. .|...|++++|+|++++|++++.+|.|++
T Consensus 88 ~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~----~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~i 160 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSV----SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI 160 (401)
T ss_dssp TTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCE----EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcE----eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEE
Confidence 37776644 455554 5678888899999999998773 23333 38999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|++.++ +.+..+.+|...|.+++|++ .+|++|+.||.|++||+..... ....+.+|.+.|.+++|+|
T Consensus 161 wd~~~~-------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 161 YDVESQ-------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH---QIGTLQGHSSEVCGLAWRS 227 (401)
T ss_dssp EETTTC-------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECT
T ss_pred EECcCC-------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcc---eeeEEcCCCCCeeEEEEcC
Confidence 999875 77888999999999999954 6999999999999999985443 4567788999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEe--CCCcEEEEecCCCCCCCceEE
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGG--DDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~--~dg~i~iwd~~~~~~~~~~~~ 406 (812)
++. +|++|+.||.|++||++. ...+..+ ..|...|.+++|+|++. ++++|+ .||.|++||++ .+..+..
T Consensus 228 ~~~-~l~s~~~d~~v~iwd~~~---~~~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~---~~~~~~~ 299 (401)
T 4aez_A 228 DGL-QLASGGNDNVVQIWDARS---SIPKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA---TGARVNT 299 (401)
T ss_dssp TSS-EEEEEETTSCEEEEETTC---SSEEEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT---TCCEEEE
T ss_pred CCC-EEEEEeCCCeEEEccCCC---CCccEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC---CCCEEEE
Confidence 988 699999999999999984 4445555 67999999999999875 777765 79999999998 4666777
Q ss_pred cccCCCCEEEEEEccCCCcEEEEE--ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASG--GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
+. +...|.+++|+|++ .+|+++ +.||.|++||+...... .......+...|.+++|+|++.
T Consensus 300 ~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~--------------~~~~~~~h~~~v~~~~~s~dg~- 362 (401)
T 4aez_A 300 VD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLT--------------KQVDIPAHDTRVLYSALSPDGR- 362 (401)
T ss_dssp EE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEE--------------EEEEEECCSSCCCEEEECTTSS-
T ss_pred Ee-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccce--------------eEEEecCCCCCEEEEEECCCCC-
Confidence 65 67789999999997 467774 37999999999875321 2222345566899999999986
Q ss_pred EEEEEeCCC-eEEEEeCCC
Q psy4510 485 TIISTANSG-FNIFRTISD 502 (812)
Q Consensus 485 ~~~~~~~~~-~~~~~~~~~ 502 (812)
.+++++.++ +.+|+....
T Consensus 363 ~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 363 ILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEECTTSEEEEEECCC-
T ss_pred EEEEEeCCCcEEEEECCCC
Confidence 455555555 556655443
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-31 Score=283.24 Aligned_cols=310 Identities=15% Similarity=0.187 Sum_probs=213.7
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCC
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDL 342 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg 342 (812)
...+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++.........+.+|...|.+++|+|. +. +|++++.||
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDK 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTS
T ss_pred cccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCC
Confidence 34578999999999999998 799999999999999998765433346667889999999999994 66 799999999
Q ss_pred eEEEEECCCCCcc------cceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceE---------
Q psy4510 343 SIRIWDTRVINTK------SCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVA--------- 405 (812)
Q Consensus 343 ~i~iwd~~~~~~~------~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~--------- 405 (812)
.|++||++..... ..+..+ ..|...|.+++|+|+ +++|++|+.||.|++||++..+....+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 9999999864321 334445 689999999999999 9999999999999999998533222111
Q ss_pred -EcccCCCCEEEEEEccC--CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 406 -TFKHHTAPVTTVEWHPT--ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 406 -~~~~h~~~v~~v~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
....|...+.+++|+|+ .+.+|++++.++.+.+|+...... .
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~------------------ 205 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-----------------H------------------ 205 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-----------------E------------------
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce-----------------e------------------
Confidence 01257778889999886 246888888888886666543310 0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccc
Q psy4510 483 PGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELED 562 (812)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 562 (812)
T Consensus 206 -------------------------------------------------------------------------------- 205 (351)
T 3f3f_A 206 -------------------------------------------------------------------------------- 205 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCccccCCCccceEEecccceEEEEEEeccC----CeEEEEeecCcceEEEEeccccccccCCccccccccccc
Q psy4510 563 DESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYG----STTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKR 638 (812)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g----~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 638 (812)
....+.+|...|++++|+|++ ++++++ +.||.|++||+......
T Consensus 206 ----------------~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~-------------- 253 (351)
T 3f3f_A 206 ----------------VAAKLPGHKSLIRSISWAPSIGRWYQLIATG--CKDGRIRIFKITEKLSP-------------- 253 (351)
T ss_dssp ----------------EEEECCCCCSCEEEEEECCCSSCSSEEEEEE--ETTSCEEEEEEEECC----------------
T ss_pred ----------------eeeecCCCCcceeEEEECCCCCCcceEEEEE--cCCCeEEEEeCCCCcCc--------------
Confidence 011223456678888899988 678887 89999999999876421
Q ss_pred CCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 639 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 639 ~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
.....+...+....+++ ....++++..+ +.....+.+|+.
T Consensus 254 -----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 293 (351)
T 3f3f_A 254 -----------LASEESLTNSNMFDNSA-DVDMDAQGRSD----------------------------SNTEEKAELQSN 293 (351)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -----------cccCCcccceeccCCCc-ccccccccccc----------------------------cccceeeeeccc
Confidence 11222222333333333 22223322221 222334555554
Q ss_pred CCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 719 ~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
...+ ++..+.+|...|++|+|+|+++ +|+||+.||+|+||++..+.
T Consensus 294 ~~~~----~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 294 LQVE----LLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEE----EEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTS
T ss_pred cccc----EEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCc
Confidence 4443 4667889999999999999999 89999999999999999876
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=288.79 Aligned_cols=243 Identities=23% Similarity=0.424 Sum_probs=210.7
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
..+....+|...|+|++| ++++||+|+.||.|+|||+.+++ ....+.+|...|.+++| ++++|++|+.||.
T Consensus 124 ~~~~~~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~ 194 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVLCLQY--DERVIITGSSDST 194 (435)
T ss_dssp CCEECCCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCC----EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred eEEecccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCe----EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCe
Confidence 334444478889999886 78999999999999999998877 66778899999999999 7889999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +.+..+.+|...|.+++|++ ..|++|+.||.|++||+.++.... ....+.+|...|.+++
T Consensus 195 i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 195 VRVWDVNTG-------EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEESSSC-------CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCE-EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCce-eeeEecCCCCcEEEEE
Confidence 999999985 77889999999999999974 599999999999999998876321 2256788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
| +++ +|++|+.||.|++||+++ ..++..+ .+|...|.+++|+ ++++++|+.||.|++||++ .+..+..
T Consensus 264 ~--~~~-~l~s~~~dg~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~---~~~~~~~ 331 (435)
T 1p22_A 264 F--DDK-YIVSASGDRTIKVWNTST---CEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRV 331 (435)
T ss_dssp E--ETT-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEEE
T ss_pred e--CCC-EEEEEeCCCeEEEEECCc---CcEEEEE-cCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECC---CCCEEEE
Confidence 9 555 699999999999999984 4455666 6899999999994 6799999999999999998 5788999
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+|...|.+++|. +.+|++|+.||.|++||+...
T Consensus 332 ~~~h~~~v~~~~~~---~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 332 LEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ECCCSSCEEEEECC---SSEEEEEETTSCEEEEEHHHH
T ss_pred EeCCcCcEEEEEec---CCEEEEEeCCCcEEEEECCCC
Confidence 99999999999993 368999999999999998655
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=289.58 Aligned_cols=309 Identities=15% Similarity=0.141 Sum_probs=226.5
Q ss_pred ccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCC--CCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhc
Q psy4510 78 EAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSK--KFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHN 155 (812)
Q Consensus 78 ~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~--~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (812)
.+++..|..++.|.||. .+++.|.... ..-.|.|.+.++..-... ..
T Consensus 10 ~~~~g~PV~sv~fs~dg-----------~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~---------------~~----- 58 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNND-----------TLLVAGGGGEGNNGIPNKLTVLRVDPTKDT---------------EK----- 58 (365)
T ss_dssp EEECSSCEEEEEEEETT-----------EEEEEEECCSSSSSCCEEEEEEEECTTSSS---------------HH-----
T ss_pred ecCCCCCEEEEEEeCCC-----------cEEEEECCCccccCCCCEEEEEEEcCCCcc---------------ee-----
Confidence 45688999999999985 3567664321 223689999987411000 00
Q ss_pred ccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEE-----------ecCCCcEEEEccCCCCccccc-----cccc
Q psy4510 156 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT-----------GDCKRNIHIWTPREAGAWQVD-----QKPL 219 (812)
Q Consensus 156 ~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat-----------~~~dg~v~iwd~~~~~~~~~~-----~~~l 219 (812)
..+.......+.+|.+.|.++++++ +.+++ |+.|+.+++|++......... ....
T Consensus 59 ------~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~ 129 (365)
T 4h5i_A 59 ------EQFHILSEFALEDNDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDAS 129 (365)
T ss_dssp ------HHEEEEEEEECCTTSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCC
T ss_pred ------eeeeeeeEEEccCCCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeec
Confidence 0000011122447778888887644 45554 456888999998765432111 1223
Q ss_pred CCCCCCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
..+...+++++|||||++|++++ .|++|+|||+.++ +++..+. |.+.|.+++|+|++ .+|++++. +.+
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-------~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~-~~~ 199 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-------TEKFEIE-TRGEVKDLHFSTDG-KVVAYITG-SSL 199 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT-------EEEEEEE-CSSCCCEEEECTTS-SEEEEECS-SCE
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-------cEEEEeC-CCCceEEEEEccCC-ceEEeccc-eeE
Confidence 34566799999999999987544 7899999999885 6666664 77889999999999 78999885 557
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC----eEEEEECCCCCcccc-eeecCCcCCCCeEEE
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL----SIRIWDTRVINTKSC-MLTLPNAHTSDVNVI 372 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~-~~~~~~~~~~~v~~l 372 (812)
++|+..++.. .......+|...|.+++|+|+++ ++++++.|+ .+++|++........ ...+ ..|...|+++
T Consensus 200 ~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~ 275 (365)
T 4h5i_A 200 EVISTVTGSC--IARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV-TNRFKGITSM 275 (365)
T ss_dssp EEEETTTCCE--EEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEE
T ss_pred EEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeee-cCCCCCeEeE
Confidence 7777766652 12345567889999999999998 588888877 688899875432221 2233 6788999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|+|+|++||+|+.|+.|+|||++ +++++.. +.+|..+|++|+|+|++ ++|++|+.|++|+|||+...
T Consensus 276 ~~Spdg~~lasgs~D~~V~iwd~~---~~~~~~~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 276 DVDMKGELAVLASNDNSIALVKLK---DLSMSKIFKQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EECTTSCEEEEEETTSCEEEEETT---TTEEEEEETTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCTT
T ss_pred EECCCCCceEEEcCCCEEEEEECC---CCcEEEEecCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999999998 4677776 47899999999999997 69999999999999999654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-31 Score=278.52 Aligned_cols=303 Identities=11% Similarity=0.046 Sum_probs=238.8
Q ss_pred ccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCC-EEEEEeCCCc
Q psy4510 218 PLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRN 296 (812)
Q Consensus 218 ~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~sg~~dg~ 296 (812)
...+|.+.|++++|+|++++|++++.|+.|++|++..+. ...+...+.+|...|.+++|+|++ . +|++|+.||.
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 80 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA----KNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGE 80 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT----TEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC----ccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCe
Confidence 456899999999999999999999999999999998741 112356677899999999999998 8 9999999999
Q ss_pred EEEEeC-CCCCcceeccccccC--CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc------ccceeecCCcCCC
Q psy4510 297 IHIWTP-REAGAWQVDQKPLVG--HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT------KSCMLTLPNAHTS 367 (812)
Q Consensus 297 i~vwd~-~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~ 367 (812)
|++|++ .++. ...+.+ |...|.+++|+| +. +|++++.||.|++||++.... ..++..+ .|..
T Consensus 81 i~~wd~~~~~~-----~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~ 151 (342)
T 1yfq_A 81 ILKVDLIGSPS-----FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKN 151 (342)
T ss_dssp EEEECSSSSSS-----EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCC
T ss_pred EEEEEeccCCc-----eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCC
Confidence 999999 7764 356777 999999999999 66 799999999999999984100 3334444 3889
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEecCC-CCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRR-FKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|.+++|++++ +++|+.+|.|++||++. .. .........|...|.+++|+| ++ .+|++++.||.|++|++....
T Consensus 152 ~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 152 KIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED-DNGTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CEEEEEECSSE--EEEEESTTEEEEEESSCCTT-CCCEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTC
T ss_pred ceEEEEecCCc--EEEEeCCCeEEEEECCcccc-ccceeeecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCC
Confidence 99999999887 99999999999999985 22 223445567889999999999 86 699999999999999997651
Q ss_pred chhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
... . ...+..+ ..+..
T Consensus 228 ~~~-------------~-------~~~~~~~--------------------------------------------~~~~~ 243 (342)
T 1yfq_A 228 DDY-------------N-------SSKRFAF--------------------------------------------RCHRL 243 (342)
T ss_dssp CST-------------T-------CTTCEEE--------------------------------------------ECCCC
T ss_pred ccc-------------c-------cccceee--------------------------------------------ecccc
Confidence 000 0 0000000 00000
Q ss_pred CCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE
Q psy4510 526 LPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG 605 (812)
Q Consensus 526 ~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~ 605 (812)
......|...|.+++|+|++++|+++
T Consensus 244 ------------------------------------------------------~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 244 ------------------------------------------------------NLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp ------------------------------------------------------CTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred ------------------------------------------------------cccccccceeEEEEEEcCCCCEEEEe
Confidence 00011355689999999999999998
Q ss_pred eecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC-CCceEEEEeCCCCCCeEEecCCCce-EEE
Q psy4510 606 VWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGDCKRN-IHI 683 (812)
Q Consensus 606 ~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh-~~~V~~l~~sp~~~~~las~s~Dg~-v~i 683 (812)
+.||.|++||+.++. ++..+.+| ...|++++ | ++.+|++++.||+ .+.
T Consensus 270 --~~dg~i~vwd~~~~~-------------------------~~~~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~~~~~ 319 (342)
T 1yfq_A 270 --GSDGIISCWNLQTRK-------------------------KIKNFAKFNEDSVVKIA--C-SDNILCLATSDDTFKTN 319 (342)
T ss_dssp --ETTSCEEEEETTTTE-------------------------EEEECCCCSSSEEEEEE--E-CSSEEEEEEECTHHHHC
T ss_pred --cCCceEEEEcCccHh-------------------------HhhhhhcccCCCceEec--C-CCCeEEEEecCCccccc
Confidence 899999999999876 67788998 99999999 8 7889999999999 666
Q ss_pred Eec
Q psy4510 684 WTP 686 (812)
Q Consensus 684 Wd~ 686 (812)
|..
T Consensus 320 ~~~ 322 (342)
T 1yfq_A 320 AAI 322 (342)
T ss_dssp SSS
T ss_pred ccc
Confidence 653
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-30 Score=284.89 Aligned_cols=287 Identities=21% Similarity=0.349 Sum_probs=232.0
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
..+|...|.+++| ++++|++|+.||.|++||+.++ +.+..+.+|.+.|.+++| ++ .+|++|+.||+|+
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~ 196 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVR 196 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC-------eEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEE
Confidence 3467778998887 7899999999999999999875 778899999999999999 44 7999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+||+.++. ....+.+|...|.+++|++ . ++++|+.||.|++||++..........+ .+|...|.+++| ++
T Consensus 197 vwd~~~~~----~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~ 266 (435)
T 1p22_A 197 VWDVNTGE----MLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DD 266 (435)
T ss_dssp EEESSSCC----EEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ET
T ss_pred EEECCCCc----EEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CC
Confidence 99999887 5677889999999999975 3 6999999999999999865433222334 789999999999 67
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
++|++|+.||.|++||++ .+..+..+.+|...|.++.|++ .++++|+.||.|++||+.+...
T Consensus 267 ~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~------------ 328 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGAC------------ 328 (435)
T ss_dssp TEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE------------
T ss_pred CEEEEEeCCCeEEEEECC---cCcEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCE------------
Confidence 899999999999999998 5678899999999999999953 5899999999999999976521
Q ss_pred CCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc
Q psy4510 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 538 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~ 538 (812)
.
T Consensus 329 -----~-------------------------------------------------------------------------- 329 (435)
T 1p22_A 329 -----L-------------------------------------------------------------------------- 329 (435)
T ss_dssp -----E--------------------------------------------------------------------------
T ss_pred -----E--------------------------------------------------------------------------
Confidence 0
Q ss_pred eEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEec
Q psy4510 539 NIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDL 618 (812)
Q Consensus 539 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~ 618 (812)
..+.+|...|.+++| ++.+++++ +.||.|++||+
T Consensus 330 ------------------------------------------~~~~~h~~~v~~~~~--~~~~l~sg--~~dg~i~vwd~ 363 (435)
T 1p22_A 330 ------------------------------------------RVLEGHEELVRCIRF--DNKRIVSG--AYDGKIKVWDL 363 (435)
T ss_dssp ------------------------------------------EEECCCSSCEEEEEC--CSSEEEEE--ETTSCEEEEEH
T ss_pred ------------------------------------------EEEeCCcCcEEEEEe--cCCEEEEE--eCCCcEEEEEC
Confidence 012234446667776 67788888 89999999999
Q ss_pred cccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
.+..... ......++..+.+|.+.|++++| ++.+|++++.||+|++||+.++
T Consensus 364 ~~~~~~~----------------~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 364 VAALDPR----------------APAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp HHHTSTT----------------SCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC----
T ss_pred CCCCCcc----------------ccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCC
Confidence 8764210 00112267788999999999999 3468999999999999988653
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-31 Score=281.61 Aligned_cols=292 Identities=13% Similarity=0.163 Sum_probs=230.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCC---CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTE---PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~---~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
.+.+..+.+|.+.|++++|+| + |++||+|+.||.|+||++.+... .....+.+|...|++++|+|++++|++++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cceeEeccCCCCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 456667779999999999999 6 69999999999999999987332 13367889999999999999999999999
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEe--cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW--SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 320 (812)
.|+.|++||+.++ . ...+.+|...|.+++| +|++ .+|++|+.||.|++||+.++. ....+..+.
T Consensus 106 ~dg~v~iwd~~~~-------~-~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~- 171 (368)
T 3mmy_A 106 CDKTAKMWDLSSN-------Q-AIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSN----PMMVLQLPE- 171 (368)
T ss_dssp TTSEEEEEETTTT-------E-EEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSS----CSEEEECSS-
T ss_pred CCCcEEEEEcCCC-------C-ceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCc----EEEEEecCC-
Confidence 9999999999874 3 4456789999999999 8887 789999999999999999876 445555443
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC----EEEEEeCCCcEEEEecC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP----LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~----~l~sg~~dg~i~iwd~~ 396 (812)
.+.++.+.+. .+++++.++.+++|+++.... ........+...+.++++.+... .+++|+.||.|++||++
T Consensus 172 ~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 172 RCYCADVIYP---MAVVATAERGLIVYQLENQPS--EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp CEEEEEEETT---EEEEEEGGGCEEEEECSSSCE--EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred CceEEEecCC---eeEEEeCCCcEEEEEeccccc--hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 6777777653 588899999999999986432 23333344555667776666554 39999999999999998
Q ss_pred CCCCCCceEEcccCCC------------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 397 RFKKGSSVATFKHHTA------------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~------------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
.......+..+..|.. +|++++|+|++ .+|++++.||.|++||+.... .+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~~----------------~~~ 309 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDART----------------KLK 309 (368)
T ss_dssp CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE----------------EEE
T ss_pred CCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCCc----------------EEE
Confidence 5322256777777766 79999999987 689999999999999998763 222
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
....+...|.+++|+|++..+++++.++....
T Consensus 310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp ECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred EecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 33344568999999999876666665543333
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-30 Score=314.43 Aligned_cols=474 Identities=9% Similarity=0.012 Sum_probs=327.7
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------CceE
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------FQLA 248 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~~i~ 248 (812)
+.+.+...+||| +.||.++. +.|++|++.+++ ...+.+|...|.+++|||||++|+.++.+ ..|.
T Consensus 13 ~~~~~~~~~~S~---~~iaf~~~-~~l~~~~~~gg~-----~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~ 83 (1045)
T 1k32_A 13 MPNLLLNPDIHG---DRIIFVCC-DDLWEHDLKSGS-----TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLY 83 (1045)
T ss_dssp CCCCCEEEEEET---TEEEEEET-TEEEEEETTTCC-----EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEE
T ss_pred ccceEeCcEEeC---CEEEEEEC-CcEEEEECCCCc-----EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEE
Confidence 456788999997 47777765 689999998764 35677899999999999999999988643 3789
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcE-------EEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCccee-----
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEG-------FAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQV----- 310 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v-------~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~----- 310 (812)
+|++.++ ....+..|...+ .+++|+|++ .++++++.+ ..|++|++..+.....
T Consensus 84 ~~d~~~g--------~~~~lt~~~~~~~~~~~~~~~~~~SpDg-~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~ 154 (1045)
T 1k32_A 84 FYNGENG--------EIKRITYFSGKSTGRRMFTDVAGFDPDG-NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPA 154 (1045)
T ss_dssp EEETTTT--------EEEECCCCCEEEETTEECSEEEEECTTC-CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSC
T ss_pred EEECCCC--------CeEEcccCCCcccccccccccccCCCCC-EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCc
Confidence 9998774 356788888888 999999999 488888754 3577787754431100
Q ss_pred ----------------------------------------ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 311 ----------------------------------------DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 311 ----------------------------------------~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
....+.+|...+.++.|+++ .++++++.++.++||.+.
T Consensus 155 ~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~ 232 (1045)
T 1k32_A 155 THILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTD 232 (1045)
T ss_dssp SEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEE
T ss_pred ceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEe
Confidence 01123467788899999987 478888889999999875
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-----------CCCCEEEEEE
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-----------HTAPVTTVEW 419 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-----------h~~~v~~v~~ 419 (812)
... .....+ ..|. .+.+++|+|+|+.|+.+ .++.|++||+. ...+..+.. |...+.+++|
T Consensus 233 ~~g--~~~~~l-~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~----~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~ 303 (1045)
T 1k32_A 233 LDG--KDLRKH-TSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD----TEKIEKIEIGDLESPEDRIISIPSKFAEDF 303 (1045)
T ss_dssp TTS--CSCEEC-CCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT----TCCEEECCCCCCCBCCSEEEECGGGGEEEE
T ss_pred CCC--CcceEe-cCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC----ceEeeeeccCcccccccccccccccceeee
Confidence 321 122333 3333 46678999999988887 48999999983 233445544 3446899999
Q ss_pred c-cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 420 H-PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 420 ~-p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
+ |++ ..|++++ ++.|.+|++.... ......+.. .+..++|+ ++..++.++. ...+|
T Consensus 304 S~pdG-~~la~~~-~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~--~~~l~ 361 (1045)
T 1k32_A 304 SPLDG-DLIAFVS-RGQAFIQDVSGTY-----------------VLKVPEPLRIRYVRRGGD-TKVAFIHGTR--EGDFL 361 (1045)
T ss_dssp EECGG-GCEEEEE-TTEEEEECTTSSB-----------------EEECSCCSCEEEEEECSS-SEEEEEEEET--TEEEE
T ss_pred cCCCC-CEEEEEE-cCEEEEEcCCCCc-----------------eEEccCCCcceEEeeeEc-CCCeEEEEEC--CCceE
Confidence 9 997 4666666 7889999987652 222233334 68899999 7654444443 33444
Q ss_pred --EeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 498 --RTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 498 --~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
......... ....+...+..++|+|++ ..++.+.... .+. ++++..+
T Consensus 362 ~~~d~~~~~~~--~l~~~~~~~~~~~~SpDG--~~la~~~~~~-~v~---~~d~~tg----------------------- 410 (1045)
T 1k32_A 362 GIYDYRTGKAE--KFEENLGNVFAMGVDRNG--KFAVVANDRF-EIM---TVDLETG----------------------- 410 (1045)
T ss_dssp EEEETTTCCEE--ECCCCCCSEEEEEECTTS--SEEEEEETTS-EEE---EEETTTC-----------------------
T ss_pred EEEECCCCCce--EecCCccceeeeEECCCC--CEEEEECCCC-eEE---EEECCCC-----------------------
Confidence 222222221 222445689999999994 4444333321 222 2222221
Q ss_pred CCccceEEecccceEEEEEEeccCCeEEEEeec--------CcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG--------EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~--------~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
........|.+.+..++|||+|++|++++.. .++.|++||+.++.
T Consensus 411 --~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~------------------------- 463 (1045)
T 1k32_A 411 --KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK------------------------- 463 (1045)
T ss_dssp --CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-------------------------
T ss_pred --ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-------------------------
Confidence 1233445788889999999999999887321 13599999998764
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec-----------------------------------------
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP----------------------------------------- 686 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~----------------------------------------- 686 (812)
+..+.+|...+.+++|+| +++.|++++.++..++|+.
T Consensus 464 -~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 541 (1045)
T 1k32_A 464 -IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 541 (1045)
T ss_dssp -EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCC
T ss_pred -EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcccccccccc
Confidence 455677888899999999 7888888887766555542
Q ss_pred -CC-----------CceeEEEEecCCCCEEEe-------------ecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 687 -RE-----------AGAWSVYLYTNRFGVLAT-------------GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 687 -~~-----------~~~~~~~~~s~dg~~las-------------gs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
.+ ......+.++|||+++++ ......|++||+.+++. ..+. ..|.++
T Consensus 542 ~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~---~~v~~~ 613 (1045)
T 1k32_A 542 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-----TEVK---NNLTDL 613 (1045)
T ss_dssp CTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE-----EEEE---EEEEEE
T ss_pred ccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE-----EEee---cCcceE
Confidence 11 011234568999987775 12355788899888763 2232 668999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+|||||+ .|++++.| .|++||+..++
T Consensus 614 ~~S~DG~-~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 614 RLSADRK-TVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EECTTSC-EEEEEETT-SCEEEEESSCT
T ss_pred EECCCCC-EEEEEcCC-cEEEEeCccCc
Confidence 9999999 68888766 89999998876
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=277.62 Aligned_cols=169 Identities=17% Similarity=0.307 Sum_probs=141.4
Q ss_pred CCCCceEEcCCCCcEEEEEecCCC--CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTE--PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+.+++..+.+|.+.|.+++|+|++ ..+|++|+.||.|++|++.+... .....+.+|...|.+++|+|+++ +|+++
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 104 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGS-KVFTA 104 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSS-EEEEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCC-EEEEE
Confidence 347778889999999999999994 37999999999999999987332 12366788999999999999998 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 416 (812)
+.||.|++||+++. ..+. + ..|...|++++| ++++++|++|+.||.|++||++ .++.+..+..|. .+.+
T Consensus 105 ~~dg~v~iwd~~~~---~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~-~~~~ 175 (368)
T 3mmy_A 105 SCDKTAKMWDLSSN---QAIQ-I-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR---SSNPMMVLQLPE-RCYC 175 (368)
T ss_dssp ETTSEEEEEETTTT---EEEE-E-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS---CSSCSEEEECSS-CEEE
T ss_pred cCCCcEEEEEcCCC---Ccee-e-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC---CCcEEEEEecCC-CceE
Confidence 99999999999843 2333 3 579999999999 8999999999999999999998 456777777664 6777
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+.+ ..+++++.++.+.+|++...
T Consensus 176 ~~~~~---~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 176 ADVIY---PMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp EEEET---TEEEEEEGGGCEEEEECSSS
T ss_pred EEecC---CeeEEEeCCCcEEEEEeccc
Confidence 77775 37888888999999999765
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=281.29 Aligned_cols=305 Identities=17% Similarity=0.219 Sum_probs=235.5
Q ss_pred CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC-CCCCEEEEEeCCCcEEEEeC
Q psy4510 225 SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~sg~~dg~i~vwd~ 302 (812)
....++++|+...++ +++.+|.|+||++..... ....+..+.+|.+.|.+++|+| ++ .+|++|+.||+|++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~---~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR---VDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEI 111 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE---CCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEEC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC---CCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEc
Confidence 345678888776544 578899999999865310 1145567889999999999999 66 89999999999999999
Q ss_pred CCCCcce---eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCC
Q psy4510 303 REAGAWQ---VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTE 378 (812)
Q Consensus 303 ~~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~ 378 (812)
.++.... .....+.+|...|.+++|+|++.++|++++.||.|++||+++ ..++..+. ..|...|.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---GAAVLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT---TEEEEEECTTTCCSCEEEEEECTTS
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---CCccEEEecCCCCCceEEEEECCCC
Confidence 8874210 145677889999999999999866899999999999999984 34455543 5789999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEc-ccCCCC-EEEEEEccCCCcEEEEE---ECCCCEEEEEcCCCCchhHHHhh
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAP-VTTVEWHPTESSTFASG---GADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
++|++|+.||.|++||++ .+..+..+ ..|.+. +.++.|+|++ .+|++| +.|+.|++||+......
T Consensus 189 ~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~------ 258 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPR---KGTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEP------ 258 (402)
T ss_dssp SCEEEEETTSEEEEEETT---TTEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSC------
T ss_pred CEEEEEecCCcEEEEeCC---CCceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCC------
Confidence 999999999999999998 46677777 788776 8999999986 688888 68999999999865210
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
+.
T Consensus 259 ---------~~--------------------------------------------------------------------- 260 (402)
T 2aq5_A 259 ---------LS--------------------------------------------------------------------- 260 (402)
T ss_dssp ---------SE---------------------------------------------------------------------
T ss_pred ---------ce---------------------------------------------------------------------
Confidence 00
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
.....|...+.+++|+|++++++++ ++.||.|
T Consensus 261 -----------------------------------------------~~~~~~~~~v~~~~~s~~~~~l~~~-g~~dg~i 292 (402)
T 2aq5_A 261 -----------------------------------------------LQELDTSSGVLLPFFDPDTNIVYLC-GKGDSSI 292 (402)
T ss_dssp -----------------------------------------------EEECCCCSSCEEEEEETTTTEEEEE-ETTCSCE
T ss_pred -----------------------------------------------EEeccCCCceeEEEEcCCCCEEEEE-EcCCCeE
Confidence 0001122356778899999988754 2679999
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC--CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 691 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~ 691 (812)
++|++.++.. .+..+.. |...|.+++|+| ++.++++ .++.+++|++.++.+
T Consensus 293 ~i~d~~~~~~------------------------~~~~l~~~~~~~~v~~~~~sp-~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 293 RYFEITSEAP------------------------FLHYLSMFSSKESQRGMGYMP-KRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEECSSTT------------------------CEEEEEEECCSSCCSEEEECC-GGGSCGG--GTEEEEEEEEETTEE
T ss_pred EEEEecCCCc------------------------ceEeecccccCCcccceEEec-cccccee--cceeEEEEEcCCCcE
Confidence 9999988751 1333333 558999999999 6777765 466999999988776
Q ss_pred eEEEEecC
Q psy4510 692 WSVYLYTN 699 (812)
Q Consensus 692 ~~~~~~s~ 699 (812)
..+.+.-|
T Consensus 346 ~~i~~~~p 353 (402)
T 2aq5_A 346 EPIAMTVP 353 (402)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 65555444
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-30 Score=276.09 Aligned_cols=271 Identities=21% Similarity=0.341 Sum_probs=214.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEEC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSV 340 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~ 340 (812)
+++..+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.... ......+.+|...|++++|+|+ +. +|++|+.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~ 77 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSY 77 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred CccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCC-EEEEecc
Confidence 4567789999999999999998 799999999999999997432 1245677889999999999987 66 7999999
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
||.|++||++... ...+..+ ..|...|.+++|+|+ +.+|++|+.||.|++||++... ......+..|...|.+++
T Consensus 78 dg~v~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 78 DGKVLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS-CCCEEEEECCTTCEEEEE
T ss_pred CCEEEEEEcCCCc-eeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC-ceeeEEecCCCCceEEEE
Confidence 9999999998532 1134444 679999999999999 8999999999999999998632 234556778999999999
Q ss_pred EccC------------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 419 WHPT------------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 419 ~~p~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
|+|. ++.+|++++.|+.|++||++..... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---------------~----------------------- 196 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---------------Y----------------------- 196 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE---------------E-----------------------
T ss_pred EcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc---------------e-----------------------
Confidence 9994 3479999999999999998754210 0
Q ss_pred EEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCC
Q psy4510 487 ISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESE 566 (812)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 566 (812)
T Consensus 197 -------------------------------------------------------------------------------- 196 (379)
T 3jrp_A 197 -------------------------------------------------------------------------------- 196 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccCCCccceEEecccceEEEEEEecc---CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCC
Q psy4510 567 GSGDEDRRKDPVMNSYFIRHRGCINRVRTCQY---GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPG 643 (812)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (812)
.....+.+|...|.+++|+|+ +++++++ +.||.|++|++.+....
T Consensus 197 -----------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~--~~dg~i~iwd~~~~~~~------------------- 244 (379)
T 3jrp_A 197 -----------VLESTLEGHSDWVRDVAWSPTVLLRSYLASV--SQDRTCIIWTQDNEQGP------------------- 244 (379)
T ss_dssp -----------EEEEEECCCSSCEEEEEECCCCSSSEEEEEE--ETTSCEEEEEESSTTSC-------------------
T ss_pred -----------eeEEEEecccCcEeEEEECCCCCCCCeEEEE--eCCCEEEEEeCCCCCcc-------------------
Confidence 001123456678899999999 7888888 89999999999886411
Q ss_pred CCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCcee
Q psy4510 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 692 (812)
Q Consensus 644 ~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~ 692 (812)
....+.....|...|++++|+| ++.+|++++.||.|++|++..+..+
T Consensus 245 -~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 245 -WKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp -CEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEEETTEE
T ss_pred -ceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCCCCCcc
Confidence 0002223345888999999999 7889999999999999999865443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.7e-31 Score=284.47 Aligned_cols=290 Identities=16% Similarity=0.094 Sum_probs=187.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcC--------CCCEEEEEeCCC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNR--------TEPLIVSGGDDG 388 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~--------~~~~l~sg~~dg 388 (812)
|...+....+.+++. +|++++.|++|+|||++...... .......+|...|++++|+| ++++||+|+.|+
T Consensus 88 ~~~~~~~~~~~~~~~-~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSL-FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ---------CCEEEE-EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred cCCCcceeecCCCCC-EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 444444444455554 79999999999999998543211 12223379999999999998 778999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
+|+|||++ ...++..+..|..+|.+++|+|++..+|++++.|++|++||+.+.+... ....
T Consensus 167 tv~~Wd~~---~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~----------------~~~~ 227 (393)
T 4gq1_A 167 TLIIWRLT---DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE----------------ENSQ 227 (393)
T ss_dssp EEEEEEEE---TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----------------------
T ss_pred eEEEEECC---CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc----------------cccc
Confidence 99999997 4567777888999999999999987799999999999999998874210 0000
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN 548 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 548 (812)
.+.. ....+......+.
T Consensus 228 ----------~~~~------------------------------~~~~~~s~~~~~~----------------------- 244 (393)
T 4gq1_A 228 ----------TELV------------------------------KNPWLLTLNTLPL----------------------- 244 (393)
T ss_dssp -------------C------------------------------SCCCSEEEESGGG-----------------------
T ss_pred ----------cCCc------------------------------ccceEEecccccc-----------------------
Confidence 0000 0000001111110
Q ss_pred CcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe-ccCCeEEEEeecCcceEEEEeccccccccCC
Q psy4510 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC-QYGSTTLAGVWGEVGKVGIWDLKTALQTVDD 627 (812)
Q Consensus 549 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s-~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~ 627 (812)
.......+|...+.+++|+ ++++.++++ +.|+++++||+....
T Consensus 245 -----------------------------~~~~~~~~~~~~v~~v~~~~~dg~~l~s~--s~d~~i~vwd~~~~~----- 288 (393)
T 4gq1_A 245 -----------------------------VNTCHSSGIASSLANVRWIGSDGSGILAM--CKSGAWLRWNLFANN----- 288 (393)
T ss_dssp -----------------------------C------CCSSSCSEEEEETTTTCEEEEE--CTTSEEEEEEC---------
T ss_pred -----------------------------eeeeecccccccceeeeeecCCCCEEEEE--eCCCCEEEEECccCC-----
Confidence 0011234566678888887 799999998 899999999998875
Q ss_pred cccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEee
Q psy4510 628 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATG 707 (812)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasg 707 (812)
....+.+|...+..+.++| +.+.+...........+. +.++.++++|
T Consensus 289 --------------------~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~sg 335 (393)
T 4gq1_A 289 --------------------DYNEISDSTMKLGPKNLLP-NVQGISLFPSLLGACPHP------------RYMDYFATAH 335 (393)
T ss_dssp -----------------------------------CCSC-SEEEECSSCCSSCCEECS------------SCTTEEEEEE
T ss_pred --------------------CCceEeeecCccccEEEcc-ccccccccCcceeEEEcc------------CCCCEEEEEE
Confidence 4556778888999999998 554554444433332222 3456678899
Q ss_pred cCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 708 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 708 s~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+.||+|++||+.+++. ...+.+|...|++|+|||||+ +||+++.|| +.+|++
T Consensus 336 s~Dg~V~lwd~~~~~~----~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDS----NSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTC----CEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcE----EEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEE
Confidence 9999999999998874 556788899999999999999 899998776 555544
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=307.61 Aligned_cols=261 Identities=16% Similarity=0.245 Sum_probs=217.8
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCce
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQL 247 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~i 247 (812)
..+.||.+.|++++|+| ++++||+|+.||.|+||++.+... .....+.+|..+|++++|+++ +++|++++.||.|
T Consensus 3 ~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~--~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEE--EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCC--ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 34569999999999999 999999999999999999874321 256678899999999999988 9999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
++|++.++ ....+..+.+|...|.+++|+|+ + .++++|+.||.|++||+...... ....+.+|...|.++
T Consensus 80 ~vwd~~~~-----~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~--~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 80 LIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNSA 151 (753)
T ss_dssp EEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCC--CCEEEECCSSCEEEE
T ss_pred EEEECCCC-----cccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCc--ceeEeecCCCceEEE
Confidence 99999885 22377888999999999999999 6 89999999999999999887421 244567899999999
Q ss_pred EEcCC-------------CCeEEEEEECCCeEEEEECCCCCcc-cceeecCCcCCCCeEEEEEcCC---CCEEEEEeCCC
Q psy4510 326 QWSPG-------------EKRVLASCSVDLSIRIWDTRVINTK-SCMLTLPNAHTSDVNVISWNRT---EPLIVSGGDDG 388 (812)
Q Consensus 326 ~~~p~-------------~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg 388 (812)
+|+|. +. +|++|+.||.|++||++..... .....+ .+|...|++++|+|+ +++|++|+.||
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 99994 66 6999999999999999865433 233344 789999999999999 88999999999
Q ss_pred cEEEEecCCCCCC--CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKG--SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++..... ..+.....|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 230 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSS
T ss_pred EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCC
Confidence 9999999853211 1333445688999999999987 58999999999999999865
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-29 Score=271.70 Aligned_cols=280 Identities=15% Similarity=0.068 Sum_probs=218.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC---cccccc-------------------------------------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---AWQVDQ------------------------------------- 216 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~---~~~~~~------------------------------------- 216 (812)
.++.+++|+| +|++|+++. ++.|++||+.+++ ......
T Consensus 5 ~p~~~v~~s~-dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSR-DGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECS-SSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecC-CCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5688999999 999777765 6799999998876 211000
Q ss_pred -------------cccCCCCCCeeeeeEcCCCCcE-EEeeCCCceEEeeCC--CCCCCCCCCCCceEEc--CCCCcEEEE
Q psy4510 217 -------------KPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKK--RGKGPGIPTPPLFSFS--GHLTEGFAM 278 (812)
Q Consensus 217 -------------~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~--~h~~~v~~l 278 (812)
....+|...|++++|+|++++| ++++.|+.|++|++. ++ .++..+. .|...|.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-------NVLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-------SCEEEEEEEECSSCEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-------ceeeeeecccCCCCceEE
Confidence 1122566689999999999996 889999999999998 54 5666665 677899999
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC---CCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 279 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG---EKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 279 ~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
+|+|++ .+|++|+.+|.|++|++.+..........+.+|...|++++|+|+ ++ +|++|+.|+.|++||+++ .
T Consensus 156 ~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~---~ 230 (450)
T 2vdu_B 156 SIAEDD-TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ---C 230 (450)
T ss_dssp EECTTS-SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC---T
T ss_pred EEcCCC-CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC---C
Confidence 999999 899999999999999998876321123367889999999999999 76 799999999999999984 4
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-------------------------cC
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-------------------------HH 410 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-------------------------~h 410 (812)
.++..+..+|...|++++|+ ++++|++|+.|+.|++||++ .++.+..+. .+
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC---CCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 44555447899999999999 99999999999999999998 455666654 23
Q ss_pred CCCEEEEEEccCCCcEEEEEE-CCCCEEEEEc--CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGG-ADDQIALWDL--AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
...|.+++|+|++ .+|++++ .++.|++|++ ...... ........+..|.+++|+|+ .+++
T Consensus 307 ~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l--------------~~~~~~~~~~~v~~~~~~~~--~~~v 369 (450)
T 2vdu_B 307 EFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDL--------------ALKQIITFPYNVISLSAHND--EFQV 369 (450)
T ss_dssp CCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCE--------------EEEEEEECSSCEEEEEEETT--EEEE
T ss_pred eEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCce--------------eeccEeccCCceEEEEecCC--cEEE
Confidence 4679999999987 5788777 8999999999 332110 22223333478999999995 5666
Q ss_pred EEeC
Q psy4510 488 STAN 491 (812)
Q Consensus 488 ~~~~ 491 (812)
+.+.
T Consensus 370 ~~~~ 373 (450)
T 2vdu_B 370 TLDN 373 (450)
T ss_dssp EECC
T ss_pred EEec
Confidence 6544
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=269.15 Aligned_cols=380 Identities=11% Similarity=0.061 Sum_probs=260.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeee---EcCCCCcEEEe---------
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ---WSDLKTALQTV--------- 241 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~---~s~~~~~l~s~--------- 241 (812)
.....|..+.++|..+..+.........+++... ....+..++ |+|+++.++..
T Consensus 25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 90 (433)
T 3bws_A 25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLEMD--------------KNIALVEMAIPVYKDEKEIELKLSSPGFQNSS 90 (433)
T ss_dssp --CEEEEEEEEECCTTCEEEETTEECCEEEEEEE--------------TTEEEEEEEEECCCTTCCEEEEEECTTBCCEE
T ss_pred cCCcEEEEEecccccCceEEcCceecceeeeecc--------------cCCccEEEEEeeccCCCcEEEEEEccccCcce
Confidence 3445688888888433444443322223333211 223455666 66666655433
Q ss_pred -----eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccc
Q psy4510 242 -----DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPL 315 (812)
Q Consensus 242 -----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~ 315 (812)
+.++.+++|.+.... ...+.+..+..+ ..+.+++|+|++ .++++++.++.|++||+.++...... ...+
T Consensus 91 ~~~~~~~~~~~~l~~~d~~~---~~~~~~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 165 (433)
T 3bws_A 91 YRIRKPEELNEKLIALDKEG---ITHRFISRFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSPPEKY 165 (433)
T ss_dssp EEESSGGGGTTCEEECCBTT---CSEEEEEEEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECCCHHH
T ss_pred eeecccCCCceEEEEECCCC---CcceEEEEEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecCcccc
Confidence 333434555543310 012344455544 445699999954 77888888999999999987632111 1145
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWD 394 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd 394 (812)
.+|...|.+++|+|++. ++++++.|+.|++||+++ ...+..+ ..|...+.+++|+|+++++ ++++.++.|++||
T Consensus 166 ~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 166 KKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKT---LAYKATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp HTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTT---CCEEEEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCC---ceEEEEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 68999999999999887 799999999999999984 3344555 5788899999999999966 5555899999999
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE--------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG--------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
++ .++.+..+..+ ..+.+++|+|++ .+|++++ .|+.|++||+...+. ..
T Consensus 241 ~~---~~~~~~~~~~~-~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~-----------------~~- 297 (433)
T 3bws_A 241 RK---TKLEIRKTDKI-GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKL-----------------ID- 297 (433)
T ss_dssp TT---TTEEEEECCCC-SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEE-----------------EE-
T ss_pred CC---CCcEEEEecCC-CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcE-----------------Ee-
Confidence 98 45666666654 458999999997 4677766 478899999875410 00
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeec
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~ 546 (812)
T Consensus 298 -------------------------------------------------------------------------------- 297 (433)
T 3bws_A 298 -------------------------------------------------------------------------------- 297 (433)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccC
Q psy4510 547 SNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD 626 (812)
Q Consensus 547 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~ 626 (812)
...|...+.+++|+|+++.++++. +.++.|++||+.++.
T Consensus 298 ------------------------------------~~~~~~~~~~~~~~~~g~~l~~~~-~~~~~v~v~d~~~~~---- 336 (433)
T 3bws_A 298 ------------------------------------TIGPPGNKRHIVSGNTENKIYVSD-MCCSKIEVYDLKEKK---- 336 (433)
T ss_dssp ------------------------------------EEEEEECEEEEEECSSTTEEEEEE-TTTTEEEEEETTTTE----
T ss_pred ------------------------------------eccCCCCcceEEECCCCCEEEEEe-cCCCEEEEEECCCCc----
Confidence 001112455678888887665542 789999999998765
Q ss_pred CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEe
Q psy4510 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLAT 706 (812)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~las 706 (812)
++..+. +...+.+++|+| ++++|++++.+.. .....++++
T Consensus 337 ---------------------~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~-----------------~~~~~~~~~ 376 (433)
T 3bws_A 337 ---------------------VQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPN-----------------HPTEGYLKK 376 (433)
T ss_dssp ---------------------EEEEEE-CSSSEEEEEECT-TSSEEEEEECCCC-----------------CTTTCTTSC
T ss_pred ---------------------EEEEec-CCCCCCeEEEcC-CCCEEEEEecCCC-----------------ccccccccc
Confidence 344443 667899999999 7777777665321 113457788
Q ss_pred ecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeec-cCCceEEeeecC
Q psy4510 707 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-VDRSNRIGARRD 767 (812)
Q Consensus 707 gs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s-~Dg~i~iWd~~~ 767 (812)
|+.||.|++||+.+++ .+..+.+ ...+.+++|+|+|+ +|++++ .|++|++|++..
T Consensus 377 g~~dg~v~~~d~~~~~----~~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 377 GLVLGKVYVIDTTTDT----VKEFWEA-GNQPTGLDVSPDNR-YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CSSCCEEEEEETTTTE----EEEEEEC-SSSEEEEEECTTSC-EEEEEETTTTEEEEEEETT
T ss_pred cccceEEEEEECCCCc----EEEEecC-CCCCceEEEcCCCC-EEEEEECCCCeEEEEEecC
Confidence 8999999999998876 3444554 35799999999999 666665 599999999864
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-28 Score=270.06 Aligned_cols=228 Identities=9% Similarity=0.051 Sum_probs=173.7
Q ss_pred ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce-----EEc
Q psy4510 195 GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF-----SFS 269 (812)
Q Consensus 195 ~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-----~~~ 269 (812)
++.++.++||.++...........+..+ ..+.+++|+|+++++++++.++.|++||+.++ +... .+.
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~ 166 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG-------QTVRLSPPEKYK 166 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTC-------CEEEECCCHHHH
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCC-------eEeeecCccccc
Confidence 3444544555544321111123334333 45669999997778888888999999999875 3333 456
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEEC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 349 (812)
+|.+.|.+++|+|++ .++++++.|+.|++||+.++. ....+..|...+.+++|+|+++.++++++.|+.|++||+
T Consensus 167 ~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 167 KKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLA----YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp TTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCC----EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCce----EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 899999999999988 799999999999999998876 455666788999999999999976677778999999999
Q ss_pred CCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
+++ ..+..+ . +...+.+++|+|+++++++++ .||.|++||++. ++.+..+ .|...+.+++|+|
T Consensus 242 ~~~---~~~~~~-~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~-~~~~~~~~~~~~~ 312 (433)
T 3bws_A 242 KTK---LEIRKT-D-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTI-GPPGNKRHIVSGN 312 (433)
T ss_dssp TTT---EEEEEC-C-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEE-EEEECEEEEEECS
T ss_pred CCC---cEEEEe-c-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeec-cCCCCcceEEECC
Confidence 843 334444 2 344599999999999888887 588999999973 4444443 4666899999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++..++++++.++.|++||+...
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp STTEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEecCCCEEEEEECCCC
Confidence 98667788899999999999865
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=295.83 Aligned_cols=265 Identities=21% Similarity=0.319 Sum_probs=210.8
Q ss_pred eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCe
Q psy4510 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLS 343 (812)
Q Consensus 266 ~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~ 343 (812)
..+.+|.+.|.+++|+|++ .+|++|+.||.|+||++..+. ......+.+|.+.|++++|+|+ +. +|++|+.||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTE--EEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSC
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCC--CccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCe
Confidence 4678999999999999998 799999999999999997542 1245678899999999999988 66 7999999999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
|++||++++. ...+..+ ..|...|++++|+|+ ++++++|+.||.|++||++... ......+.+|...|.+++|+|
T Consensus 79 I~vwd~~~~~-~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 79 VLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp EEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-CCCCEEEECCSSCEEEEEECC
T ss_pred EEEEECCCCc-ccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-CcceeEeecCCCceEEEEecC
Confidence 9999998532 1234444 789999999999999 8999999999999999998632 234556788999999999999
Q ss_pred C------------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 422 T------------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 422 ~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
. ++.+|++|+.||.|++||++..... .
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~------------------------------------~----- 194 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT------------------------------------Y----- 194 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTE------------------------------------E-----
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCccc------------------------------------c-----
Confidence 5 2468999999999999998754210 0
Q ss_pred eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCC
Q psy4510 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
T Consensus 195 -------------------------------------------------------------------------------- 194 (753)
T 3jro_A 195 -------------------------------------------------------------------------------- 194 (753)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccceEEecccceEEEEEEecc---CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCC
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQY---GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPT 646 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (812)
.....+.+|...|.+++|+|+ +++++++ +.||.|++||+.++... ..
T Consensus 195 --------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~--s~Dg~I~iwd~~~~~~~--------------------~~ 244 (753)
T 3jro_A 195 --------VLESTLEGHSDWVRDVAWSPTVLLRSYLASV--SQDRTCIIWTQDNEQGP--------------------WK 244 (753)
T ss_dssp --------EEEEEECCCSSCEEEEEECCCCSSSEEEEEE--ESSSCEEEEEESSSSSC--------------------CB
T ss_pred --------eeeeeecCCCCcEEEEEeccCCCCCCEEEEE--ecCCEEEEecCCCCCCc--------------------ce
Confidence 001124456678999999999 8888888 89999999999886421 11
Q ss_pred CCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 647 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 647 ~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
..+....+|...|++++|+| ++.+|++++.||.|++|++.++
T Consensus 245 ~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 245 KTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCCSS
T ss_pred eEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecCCC
Confidence 12334567889999999999 7889999999999999999863
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=270.36 Aligned_cols=206 Identities=12% Similarity=0.074 Sum_probs=165.8
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE-----------------------------------
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS----------------------------------- 267 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----------------------------------- 267 (812)
..++.+++|+++|++|+++ .++.|++||+.++.. ...+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNH----WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKS 78 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTE----EEEEEEEECCC------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCc----ceeeeecCCccccccccccccchhhcccccccccccccccc
Confidence 3578999999999966555 578999999887630 001111
Q ss_pred -------------------EcCCCCcEEEEEecCCCCCE-EEEEeCCCcEEEEeCC--CCCcceecccccc--CCCCCEE
Q psy4510 268 -------------------FSGHLTEGFAMDWSSTEPGV-LATGDCKRNIHIWTPR--EAGAWQVDQKPLV--GHTNSVE 323 (812)
Q Consensus 268 -------------------~~~h~~~v~~l~~sp~~~~~-l~sg~~dg~i~vwd~~--~~~~~~~~~~~~~--~h~~~v~ 323 (812)
..+|.+.|.+++|+|++ .+ +++|+.||.|++|++. ++. ....+. .|...|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~~~v~ 153 (450)
T 2vdu_B 79 NKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKN----VLKLRKRFCFSKRPN 153 (450)
T ss_dssp ---------------------CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSS----CEEEEEEEECSSCEE
T ss_pred CcCccccccCccccCCCCCCCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCc----eeeeeecccCCCCce
Confidence 22456689999999999 56 5999999999999998 555 233343 5778999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEecCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRT---EPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
+++|+|+++ +|++|+.+|.|++|++....... +...+ .+|...|++++|+|+ +++|++|+.|+.|++||++
T Consensus 154 ~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~--- 228 (450)
T 2vdu_B 154 AISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP--- 228 (450)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES---
T ss_pred EEEEcCCCC-EEEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC---
Confidence 999999998 69999999999999998654433 33344 689999999999999 8899999999999999998
Q ss_pred CCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 400 KGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 400 ~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+..+.. +.+|...|++++|+ ++ .+|++++.|+.|++||+.+.+
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCC
T ss_pred CCceeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCc
Confidence 4556666 66899999999999 65 799999999999999998773
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-27 Score=289.54 Aligned_cols=425 Identities=12% Similarity=0.035 Sum_probs=302.8
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC------C
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------R 295 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g 295 (812)
+...+.+.+||+ ++|+.++. +.|.+|++.++ ....+.+|...+.+++|||+| .+||+++.+ .
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg--------~~~~lt~~~~~v~~~~~SPDG-~~la~~s~~~~~~~~~ 80 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSG--------STRKIVSNLGVINNARFFPDG-RKIAIRVMRGSSLNTA 80 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTC--------CEEEEECSSSEEEEEEECTTS-SEEEEEEEESTTCCEE
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCC--------cEEEeeeCCCcccCeEECCCC-CEEEEEEeeccCCCCC
Confidence 456788999995 57777765 68999999774 356788899999999999999 677776543 4
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCE-------EEEEEcCCCCeEEEEEECC------CeEEEEECCCCCcccceeecC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSV-------EDLQWSPGEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v-------~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~ 362 (812)
.|++|++.++. ...+..|...+ ..++|+|+|+ ++++++.+ ..|.+|++..+. ...+.
T Consensus 81 ~i~~~d~~~g~-----~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~----~~~l~ 150 (1045)
T 1k32_A 81 DLYFYNGENGE-----IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGIN----FVPLN 150 (1045)
T ss_dssp EEEEEETTTTE-----EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTE----EEECC
T ss_pred eEEEEECCCCC-----eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCC----eEEec
Confidence 79999988764 45677888888 9999999998 78888755 357777875321 22331
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeC------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGD------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
. + ....++|+| | ++++++. +...++|.... . .....+.+|...+.++.|+++ .+++++
T Consensus 151 ~-~--~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~--~-~~~~~l~~~~~~v~~~~~s~d--~l~~~~ 220 (1045)
T 1k32_A 151 L-G--PATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVN--S-GAFKKIVDMSTHVSSPVIVGH--RIYFIT 220 (1045)
T ss_dssp S-C--SCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEE--T-TEEEEEECCSSCCEEEEEETT--EEEEEE
T ss_pred C-C--CcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECC--C-CCeEECcCCCCcccceEEeCC--EEEEEE
Confidence 2 2 234677999 8 8888753 34567776442 2 445566889999999999986 577888
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI 510 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (812)
+.++.+.+|.+..... .... ...+..+..++|+|++..++.+ ....+.+|.. .. ..+. .
T Consensus 221 ~~dg~~~l~~~~~~g~---------------~~~~-l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~-~~--~~l~-~ 279 (1045)
T 1k32_A 221 DIDGFGQIYSTDLDGK---------------DLRK-HTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNP-DT--EKIE-K 279 (1045)
T ss_dssp CTTSSCEEEEEETTSC---------------SCEE-CCCCCSSCEEEEEESSSCEEEE-ETTEEEEECT-TT--CCEE-E
T ss_pred eccCceEEEEEeCCCC---------------cceE-ecCCCCcceeeEcCCCCEEEEE-eCCEEEEecC-Cc--eEee-e
Confidence 8899999998764321 1111 1122346677999998655554 4545555543 21 1221 1
Q ss_pred ecC------------CCCeeEEEEc-CCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 511 HLG------------QKEIKELHWH-PQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 511 ~~~------------~~~i~~~~~~-p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
... ...+..++|+ |++..++.+. .+ .+..+... .+
T Consensus 280 l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~--~i~~~~~~---~~------------------------- 327 (1045)
T 1k32_A 280 IEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RG--QAFIQDVS---GT------------------------- 327 (1045)
T ss_dssp CCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TT--EEEEECTT---SS-------------------------
T ss_pred eccCcccccccccccccccceeeecCCCCCEEEEEE--cC--EEEEEcCC---CC-------------------------
Confidence 111 2268899999 9954333333 21 12222211 10
Q ss_pred ccceEEecccc-eEEEEEEeccCCeEEEEeecCcceEE-EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC
Q psy4510 578 VMNSYFIRHRG-CINRVRTCQYGSTTLAGVWGEVGKVG-IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 655 (812)
Q Consensus 578 ~~~~~~~~h~~-~v~~l~~s~~g~~l~~~~~~~dg~I~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh 655 (812)
....+..|.. .+..++|+ +|+.++.+ +.++.+. +|++.++. ...+.+|
T Consensus 328 -~~~~~~~~~~~~~~~~~~s-dg~~l~~~--s~~~~l~~~~d~~~~~--------------------------~~~l~~~ 377 (1045)
T 1k32_A 328 -YVLKVPEPLRIRYVRRGGD-TKVAFIHG--TREGDFLGIYDYRTGK--------------------------AEKFEEN 377 (1045)
T ss_dssp -BEEECSCCSCEEEEEECSS-SEEEEEEE--ETTEEEEEEEETTTCC--------------------------EEECCCC
T ss_pred -ceEEccCCCcceEEeeeEc-CCCeEEEE--ECCCceEEEEECCCCC--------------------------ceEecCC
Confidence 0122345556 78999999 99999988 5688888 99987764 2334478
Q ss_pred CCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEE----------EEecCCCCEEEeecCCC----------eEEE
Q psy4510 656 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV----------YLYTNRFGVLATGDCKR----------NIHI 715 (812)
Q Consensus 656 ~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~----------~~~s~dg~~lasgs~dg----------~i~i 715 (812)
...+.+++||| ++++|++++.++.|++||+.+++...+ .+|||||++||+++.++ .|++
T Consensus 378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred ccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 88999999999 899999999999999999998766443 46899999999887654 9999
Q ss_pred eecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 716 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 716 wd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
||+.+++ ...+.+|...+.+++|+|||+ +|++++.++..++|+....
T Consensus 457 ~d~~~g~-----~~~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 457 YDMEGRK-----IFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EETTTTE-----EEECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSSS
T ss_pred EECCCCc-----EEEeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchhcc
Confidence 9998764 456778888899999999999 7999999999999986543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.74 Aligned_cols=241 Identities=9% Similarity=0.009 Sum_probs=182.0
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC--CCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG--PGI 260 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~--~~~ 260 (812)
.+.+ ++.+||||+.||.|+|||+.+++.. ..+. ...|.+++|+|. +++++.|+.|++|+...... ...
T Consensus 43 ~~~~-d~~~l~sg~~Dg~v~iwd~~~~~~~----~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYY-DKWVCMCRCEDGALHFTQLKDSKTI----TTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSE-EEEEEEEEEETTEEEEEEESSSSCE----EEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcC-CCCEEEEECCCCcEEEEECCCCcEE----EEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC
Confidence 3445 8899999999999999999987632 2232 567889999988 99999999999997763100 000
Q ss_pred CCCCceEEc-CCCCcEEEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEE
Q psy4510 261 PTPPLFSFS-GHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 261 ~~~~~~~~~-~h~~~v~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~ 336 (812)
....+..+. +|.+.|.+++|+| ++ .+|++|+.||+|++||+.++.. .... ..|...|.+++|+|++. +|+
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~~i~~~~~~pdg~-~la 186 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQ----YIVHSAKSDVEYSSGVLHKDSL-LLA 186 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCE----EEEECCCSSCCCCEEEECTTSC-EEE
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcE----EEEEecCCCCceEEEEECCCCC-EEE
Confidence 112233333 6778999999999 88 8999999999999999998763 2222 34566899999999998 799
Q ss_pred EEECCCeEEEEECCCCCcccce-eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCM-LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+|+.||.|++||++++. .+ ..+...|...|++++|+|++.+|++|+ ++.|++||++..+....+..+..|...+.
T Consensus 187 sg~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 262 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPD---QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG 262 (343)
T ss_dssp EECTTSCEEEEESSCTT---SCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----C
T ss_pred EEcCCCEEEEEECCCCC---CCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccccccc
Confidence 99999999999999543 33 445334999999999999999999999 55999999996332222333333444444
Q ss_pred --EEEEccCCCcEEEEEEC-CCCEEEEEcCCC
Q psy4510 416 --TVEWHPTESSTFASGGA-DDQIALWDLAVE 444 (812)
Q Consensus 416 --~v~~~p~~~~~l~s~~~-dg~v~iwd~~~~ 444 (812)
+++|+|++ .+|++++. |+.|++|++...
T Consensus 263 ~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 263 TVTYDIDDSG-KNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CEEEEECTTS-SEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEECCCC-CEEEEecCCCCcEEEEEEccc
Confidence 69999997 68999888 999999999765
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=259.55 Aligned_cols=290 Identities=13% Similarity=0.115 Sum_probs=209.2
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.++..+.+|...|.+++|+|++ .+|++|+.++ +++|++..... ... .+...+..+++.++++.++++++.|+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAH----IMS--QEMRHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEE----EEE--EECSCCCEEEECTTSSEEEEECSSTT
T ss_pred CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcce----eee--eecCCeEEEEEcCCCCEEEEEECCcc
Confidence 6677788999999999999999 7999988765 78999876541 111 12235788899998886667788899
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+|++||+++ ..++..+ .+...|.+++|+++. ++++ .++.|++||++.. .+.+..+.. +...+++++
T Consensus 82 ~v~iWd~~~---~~~~~~~--~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~--~~~~~~~~~---~~~~~~~s~- 147 (355)
T 3vu4_A 82 VVHIWDDVK---KQDVSRI--KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNP--WKRITDDIR---FGGVCEFSN- 147 (355)
T ss_dssp EEEEEETTT---TEEEEEE--ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTT--CCBSSCCEE---EEEEEEEET-
T ss_pred EEEEEECCC---CcEEEEE--ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCC--ceeeEEecc---CCceEEEEc-
Confidence 999999984 4445555 366799999999764 4444 3789999999852 144444443 445566776
Q ss_pred CCcEEEE--EECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 423 ESSTFAS--GGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 423 ~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
.+++. |+.||.|++||+....... .. ..
T Consensus 148 --~~la~~sg~~~g~v~iwd~~~~~~~~------------------~~-----------~~------------------- 177 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQSSGSAT------------------TQ-----------DQ------------------- 177 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECCC---------------------------------------------------------
T ss_pred --cEEEEeCCCcCcEEEEEECCCCCccc------------------cc-----------cc-------------------
Confidence 35555 5789999999998763100 00 00
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc-
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM- 579 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 579 (812)
..... ....
T Consensus 178 ---------------~~~~~-------------------------------------------------------~~~p~ 187 (355)
T 3vu4_A 178 ---------------GVQQK-------------------------------------------------------AILGK 187 (355)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ---------------ccccc-------------------------------------------------------ccCcc
Confidence 00000 0001
Q ss_pred ceEEecccceEEEEEEeccCCeEEEEeecCcce-EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec-C-CC
Q psy4510 580 NSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK-VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS-G-HL 656 (812)
Q Consensus 580 ~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~-I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-h~ 656 (812)
...+.+|.+.|++++|+|+|++|+++ +.||+ |++||+.++. ++..+. + |.
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~--s~d~~~v~iwd~~~~~-------------------------~~~~~~~g~h~ 240 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATC--SQDGTIIRVFKTEDGV-------------------------LVREFRRGLDR 240 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEE--ETTCSEEEEEETTTCC-------------------------EEEEEECTTCC
T ss_pred cEEEEccCCceEEEEECCCCCEEEEE--eCCCCEEEEEECCCCc-------------------------EEEEEEcCCCC
Confidence 34567889999999999999999999 89998 9999999876 677787 6 99
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------------------------eEEEEecCCCCE
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------------------------------WSVYLYTNRFGV 703 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------------------------------~~~~~~s~dg~~ 703 (812)
..|++++|+| ++.+|++++.|++|++||+..+.. ...+++++|+++
T Consensus 241 ~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 241 ADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp SCEEEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CcEEEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 9999999999 889999999999999999976320 155789999999
Q ss_pred EEeecCCCeEEEeecCCCC
Q psy4510 704 LATGDCKRNIHIWTPREAG 722 (812)
Q Consensus 704 lasgs~dg~i~iwd~~~~~ 722 (812)
|++++.||.+++|++..++
T Consensus 320 l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 320 VVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEETTTTEEEEEEEEEET
T ss_pred EEEEeCCCeEEEEEEEcCC
Confidence 9999999999999987654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-27 Score=253.52 Aligned_cols=326 Identities=8% Similarity=0.029 Sum_probs=240.3
Q ss_pred CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc
Q psy4510 236 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 236 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 315 (812)
..+++++.++.|++||+.++ +.+..+.+|. .+.+++|+|++..++++++.++.|++||+.+++ ....+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~----~~~~~ 70 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-------KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----VIATV 70 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE----EEEEE
T ss_pred EEEEEcCCCCEEEEEECCCC-------eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe----EEEEE
Confidence 35778889999999999875 6677777765 489999999994445788899999999998876 34444
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWD 394 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd 394 (812)
..+. .+.+++|+|+++.++++++.++.|++||+.++ ..+..+ .+...+.+++|+|+++.| ++++.++.|++||
T Consensus 71 ~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 71 PAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp ECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEE--eCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 4343 89999999999976677778899999999853 334443 234578999999999966 7888899999999
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
++ .++.+..+..| ..+.+++|+|++..++++++.++.|++||+...+. ..
T Consensus 145 ~~---~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-----------------~~--------- 194 (391)
T 1l0q_A 145 TV---TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-----------------ID--------- 194 (391)
T ss_dssp TT---TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----------------EE---------
T ss_pred CC---CCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-----------------EE---------
Confidence 97 45666666655 45799999999865557888899999999876510 00
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
T Consensus 195 -------------------------------------------------------------------------------- 194 (391)
T 1l0q_A 195 -------------------------------------------------------------------------------- 194 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec-CcceEEEEeccccccccCCcccccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG-EVGKVGIWDLKTALQTVDDPFQLAE 633 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~-~dg~I~iwd~~~~~~~~~~~~~~~~ 633 (812)
...+...+.+++|+|+++++++++.. .++.|++||+.++.
T Consensus 195 ----------------------------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~----------- 235 (391)
T 1l0q_A 195 ----------------------------TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK----------- 235 (391)
T ss_dssp ----------------------------EEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-----------
T ss_pred ----------------------------EEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-----------
Confidence 00011256678899999988887311 68999999998875
Q ss_pred cccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-EecCCCceEEEEecCCCceeEEEE----------------
Q psy4510 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL-ATGDCKRNIHIWTPREAGAWSVYL---------------- 696 (812)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l-as~s~Dg~v~iWd~~~~~~~~~~~---------------- 696 (812)
++..+..|. .+.+++|+| +++.| ++++.|+.|++||+.+++......
T Consensus 236 --------------~~~~~~~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (391)
T 1l0q_A 236 --------------ITARIPVGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIP 299 (391)
T ss_dssp --------------EEEEEECCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECS
T ss_pred --------------EEEEEecCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccc
Confidence 456666655 578999999 66655 788999999999999866543321
Q ss_pred ---------ecCCC----------CEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeec
Q psy4510 697 ---------YTNRF----------GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755 (812)
Q Consensus 697 ---------~s~dg----------~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s 755 (812)
|+.+. ..+...+.+..+++|++.++.. ..+..+ ...|+++|. |.++..
T Consensus 300 ~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~--------~~~~~~--~~~~~~~g~-y~~~~~ 366 (391)
T 1l0q_A 300 VQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS--------SKKQNP--THTYSETGI-YTVRLT 366 (391)
T ss_dssp SCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE--------ECSSSC--EECCSSCEE-EEEEEE
T ss_pred ccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc--------cCcCCC--eEEeCCCce-EEEEEE
Confidence 22111 2355667788999999987752 112222 368999998 676543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-28 Score=242.30 Aligned_cols=279 Identities=13% Similarity=0.058 Sum_probs=193.8
Q ss_pred CEEEEEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 321 SVEDLQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 321 ~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
.+.++.|-..+ +...+.......|++|+.....+-..+.+. ..|..+|..+.+.|+..-|++.. +
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~---------~---- 106 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTW-HFAEVPVLQIVPVPDVYNLVCVA---------L---- 106 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEE-ECCSSCEEEECCCTTCCSCEEEE---------E----
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEE-eccCceeEEEEEcCcccceeeee---------e----
Confidence 35566664433 333333444589999999976555677777 88999999999999875222211 1
Q ss_pred CCCceEEcccCCCCEEEEEEccC----CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPT----ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
-.-+...|.+++++|+ + +++++++.+ +++|++..+ +
T Consensus 107 -------~~~~~~~v~sla~spd~~~~~-~~l~s~g~~--~~v~~l~~g-----------------~------------- 146 (356)
T 2w18_A 107 -------GNLEIREIRALFCSSDDESEK-QVLLKSGNI--KAVLGLTKR-----------------R------------- 146 (356)
T ss_dssp -------CSSSEEEEEEECC------CC-EEEEEEEEE--EEEEEETTT-----------------E-------------
T ss_pred -------ccccccceEEEEECCCccccc-cEEEeCCCe--EEEEecCCC-----------------c-------------
Confidence 0113456889999998 6 588887744 888987543 1
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 476 LHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
++.++..+ +...|..++++|+ +..+
T Consensus 147 ---------lv~ss~~g--------------------~d~~V~~~~~s~d--G~~~------------------------ 171 (356)
T 2w18_A 147 ---------LVSSSGTL--------------------SDQQVEVMTFAED--GGGK------------------------ 171 (356)
T ss_dssp ---------EEEEESSS--------------------TTCEEEEEEECTT--SCEE------------------------
T ss_pred ---------EEEecccC--------------------CCCcEEEEEECCC--Ccee------------------------
Confidence 22221110 1234444555555 2221
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEec---cCCeEEEEeecCcceEEEEeccccccccCCccccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ---YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~---~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
.....|...++.++|++ ++..|+++ +.|++|+|||+.+++
T Consensus 172 -------------------------~s~~~~~~~v~~l~fs~~~g~~~~LaSg--S~D~TIkIWDl~TGk---------- 214 (356)
T 2w18_A 172 -------------------------ENQFLMPPEETILTFAEVQGMQEALLGT--TIMNNIVIWNLKTGQ---------- 214 (356)
T ss_dssp -------------------------EEEEECCCSSCEEEEEEEETSTTEEEEE--ETTSEEEEEETTTCC----------
T ss_pred -------------------------eeeccCCCceeeEEeeccCCCCceEEEe--cCCCcEEEEECCCCc----------
Confidence 23446667788889999 67889988 899999999999987
Q ss_pred ccccccCCCCCCCCCCeeeecCCCC---ceEEEEeCCCCCCeE------------EecCCCceEEEEecCCCceeEEEEe
Q psy4510 633 EHNKKRGKGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVL------------ATGDCKRNIHIWTPREAGAWSVYLY 697 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~l~~sp~~~~~l------------as~s~Dg~v~iWd~~~~~~~~~~~~ 697 (812)
+++++.+|.. .+.+++|+| ++.++ ++|+.|++|++||+.+++.+.+..+
T Consensus 215 ---------------~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 215 ---------------LLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp ---------------EEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ---------------EEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 7788887653 677889999 77765 6788999999999999988776543
Q ss_pred c-CCCC------------EEEeecCCCeEEEeecCCCCCcccccccccCCCccee-EeEEecCCceeEEeeccCCceEEe
Q psy4510 698 T-NRFG------------VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE-DLQWSPGEKRVLASCSVDRSNRIG 763 (812)
Q Consensus 698 s-~dg~------------~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~-~l~fs~dg~~~L~s~s~Dg~i~iW 763 (812)
+ |+|. ++|+|+.|++|+|||+.+++ ++.++.+|...+. +++|||||+ +|+||+.|++||||
T Consensus 279 ~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk----~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklW 353 (356)
T 2w18_A 279 CLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQ----CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVY 353 (356)
T ss_dssp CCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCS----EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEE
T ss_pred eccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCc----EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEe
Confidence 3 5554 68999999999999999998 5778999988665 589999999 89999999999999
Q ss_pred eec
Q psy4510 764 ARR 766 (812)
Q Consensus 764 d~~ 766 (812)
|+.
T Consensus 354 d~~ 356 (356)
T 2w18_A 354 HYS 356 (356)
T ss_dssp EEC
T ss_pred cCC
Confidence 963
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-28 Score=254.68 Aligned_cols=297 Identities=10% Similarity=0.082 Sum_probs=205.8
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCCCce
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i 247 (812)
+....+|.+.|++++|+| +|++||+|+.+| ++||++.+... . ...+...+..+++.+.++.+ ++++.++.|
T Consensus 12 ~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAH----I--MSQEMRHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEE----E--EEEECSCCCEEEECTTSSEEEEECSSTTEE
T ss_pred ccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcce----e--eeeecCCeEEEEEcCCCCEEEEEECCccEE
Confidence 334458999999999999 999999999775 78999876542 1 11222358889999998888 467788999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC-CcceeccccccCCCCCEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-GAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~~~ 326 (812)
++||..++ +++..+. |...|.+++|+++ .++++. ++.|++||+.+. . ....+.. ....++
T Consensus 84 ~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~i~i~d~~~~~~----~~~~~~~---~~~~~~ 144 (355)
T 3vu4_A 84 HIWDDVKK-------QDVSRIK-VDAPVKDLFLSRE---FIVVSY-GDVISVFKFGNPWK----RITDDIR---FGGVCE 144 (355)
T ss_dssp EEEETTTT-------EEEEEEE-CSSCEEEEEECSS---EEEEEE-TTEEEEEESSTTCC----BSSCCEE---EEEEEE
T ss_pred EEEECCCC-------cEEEEEE-CCCceEEEEEcCC---EEEEEE-cCEEEEEECCCCce----eeEEecc---CCceEE
Confidence 99999885 6666666 6679999999986 344443 789999999987 4 2333333 455666
Q ss_pred EcCCCCeEEEE--EECCCeEEEEECCCCCcc------------cc-eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc-E
Q psy4510 327 WSPGEKRVLAS--CSVDLSIRIWDTRVINTK------------SC-MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC-I 390 (812)
Q Consensus 327 ~~p~~~~~l~s--~~~dg~i~iwd~~~~~~~------------~~-~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-i 390 (812)
+++ . +++. |+.||.|++||++..... .+ +..+ .+|...|++++|+|++++|++|+.||+ |
T Consensus 145 ~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 145 FSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EET--T-EEEEEESSCTTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 777 4 4555 588999999999853200 01 4445 789999999999999999999999998 9
Q ss_pred EEEecCCCCCCCceEEcc-c-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhh-c-----cCCCc
Q psy4510 391 HVWDLRRFKKGSSVATFK-H-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL-K-----DLPSQ 462 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~-----~~~~~ 462 (812)
++||++ .++.+..+. + |...|++++|+|++ .+|++++.|++|++||+............... . .....
T Consensus 221 ~iwd~~---~~~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 221 RVFKTE---DGVLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEEETT---TCCEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEEECC---CCcEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 999998 577888887 5 99999999999987 69999999999999999865321100000000 0 00000
Q ss_pred e-EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 463 L-LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 463 ~-~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
. .+..........++|++++..+++.+.++.+.+|...
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 0 0111112234778999997655555444445666443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=255.22 Aligned_cols=228 Identities=12% Similarity=0.049 Sum_probs=178.7
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
+.++++++.|+.|++||+.+++ ....+..|. .+.+++|+|++++| ++++.++.|++||+.++ +.+..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~----~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-------~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNK----VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-------NVIAT 69 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTE----EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-------EEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCe----EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC-------eEEEE
Confidence 3578899999999999998876 445555564 58999999999987 66778999999999875 56666
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+..+. .+.+++|+|++..++++++.++.|++||+.++. ....+. +...+.+++|+|+++.++++++.++.|++|
T Consensus 70 ~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~----~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 70 VPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT----VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp EECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe----EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 66555 899999999994445666678999999999876 333333 345789999999999766888899999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|++++ ..+..+ .. ...+.+++|+|+++++ ++++.++.|++||++. ++.+..+. +...+.+++|+|++. +
T Consensus 144 d~~~~---~~~~~~-~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~~g~-~ 213 (391)
T 1l0q_A 144 NTVTK---AVINTV-SV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT---NSVIDTVK-VEAAPSGIAVNPEGT-K 213 (391)
T ss_dssp ETTTT---EEEEEE-EC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEE-CSSEEEEEEECTTSS-E
T ss_pred ECCCC---cEEEEE-ec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEEe-cCCCccceEECCCCC-E
Confidence 99843 334444 22 3567999999999866 6778899999999984 44555554 566889999999974 6
Q ss_pred EEEEE---CCCCEEEEEcCCC
Q psy4510 427 FASGG---ADDQIALWDLAVE 444 (812)
Q Consensus 427 l~s~~---~dg~v~iwd~~~~ 444 (812)
|++++ .++.|++||+...
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT
T ss_pred EEEEecCcCCCcEEEEECCCC
Confidence 66665 6899999998755
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5e-29 Score=267.79 Aligned_cols=251 Identities=15% Similarity=0.152 Sum_probs=182.0
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcC--------CCCcEEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSD--------LKTALQTVDDP 244 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~--------~~~~l~s~~~d 244 (812)
+|...+....+++ ++.+||+|+.|++|+|||+.++... ......+.+|.+.|.+++|+| ++++||+++.|
T Consensus 87 ~~~~~~~~~~~~~-~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 87 LHDGDGNVNSSPV-YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ----------CCE-EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred ccCCCcceeecCC-CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 4444455555566 8889999999999999999887543 224567899999999999998 88999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-------------
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD------------- 311 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~------------- 311 (812)
++|+|||+.++ .++..+.+|...|.+++|+|++..+|++|+.||+|++||+.++......
T Consensus 166 ~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 166 CTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp SEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred CeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 99999999874 6777888899999999999998668999999999999999876531100
Q ss_pred --------cccccCCCCCEEEEEEc-CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE-----------
Q psy4510 312 --------QKPLVGHTNSVEDLQWS-PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV----------- 371 (812)
Q Consensus 312 --------~~~~~~h~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~----------- 371 (812)
.....+|...|.++.|+ |++. .|++++.|+++++||++...... .+ ..|...+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~---~l-~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYN---EI-SDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-----------------------CCSCSEEEEC
T ss_pred cccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCc---eE-eeecCccccEEEcccccccc
Confidence 11234688899999997 6777 69999999999999998543221 11 222222222
Q ss_pred -------EEEcC-CCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 372 -------ISWNR-TEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 372 -------l~~~~-~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..|++ .+. ++++|+.||.|++||+. .+..+..+..|..+|.+++|+|+| ++||+++.+| +.+|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~---~~~~~~~~~~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY---EKDSNSIPIQLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT---CTTCCEEEEECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEG
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECC---CCcEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEe
Confidence 23333 333 67788899999999998 466777788899999999999997 6999998766 7777764
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-27 Score=251.46 Aligned_cols=195 Identities=10% Similarity=0.012 Sum_probs=156.2
Q ss_pred eeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC--
Q psy4510 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-- 306 (812)
Q Consensus 229 l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~-- 306 (812)
..+.+++++|++|+.||.|++||+.++ +.+..+. ...|.++.|+|. +++|+.|++|++|+.....
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~-------~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDS-------KTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSS-------SCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCC-------cEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEE
Confidence 345578889999999999999999885 5666665 466788888886 9999999999999876321
Q ss_pred ----cceeccccccCCCCCEEEEEEcC--CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 307 ----AWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 307 ----~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
..........+|...|.+++|+| +++ +|++++.||+|++||++++ .++......|...|++++|+|++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD---SQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS---CEEEEECCCSSCCCCEEEECTTSCE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC---cEEEEEecCCCCceEEEEECCCCCE
Confidence 00111222336778999999999 888 6999999999999999854 3344443456678999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCce-EEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSV-ATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|++|+.||.|++||++. +..+ ..+.. |.++|++++|+|++ .+|++++ ++.|++||++...
T Consensus 185 lasg~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSS---PDQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp EEEECTTSCEEEEESSC---TTSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSST
T ss_pred EEEEcCCCEEEEEECCC---CCCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCC
Confidence 99999999999999984 4555 77887 99999999999987 6899998 5599999998763
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.9e-26 Score=251.58 Aligned_cols=335 Identities=10% Similarity=0.050 Sum_probs=245.4
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC--CCCCCCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK--KRGKGPG 259 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~--~~~~~~~ 259 (812)
+|+| ++.++++++.|++|.+||..+++ ....+. +|. +.+++|+|+|++|++++.++.|++||+ .++
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---- 212 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---- 212 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCC----EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCce----EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC----
Confidence 3889 89999999999999999998887 445555 443 889999999999999999999999999 553
Q ss_pred CCCCCceEEcCCCCcEEEEEecC----CCCCEEEEEe-CCCcEEEEeCCCCCcceeccccccC----------C-CCCEE
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSS----TEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVG----------H-TNSVE 323 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp----~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~----------h-~~~v~ 323 (812)
+.+.++. +...+..++|+| ++ ++|++++ .+++|.+||..+.+. ...+.. | ...+.
T Consensus 213 ---~~~~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~----~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 213 ---TKVAEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEP----KQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp ---EEEEEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCE----EEEEECCEECSSSCCEESCCCEE
T ss_pred ---cEEEEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEecccccc----ceeecccCcccCccccccCCceE
Confidence 5666776 456789999999 99 6777776 489999999988763 222221 2 33789
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS-GGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~ 402 (812)
.+.++|+++.++++...++.|.+||+....... +..+ .+...+..+.|+|++++|++ +..++.|.+||+. +++
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~---tg~ 357 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK---DRR 357 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT---TTE
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEECC---CCe
Confidence 999999999888999999999999998543221 1233 35566888999999996655 4568999999998 456
Q ss_pred ceEEccc----CCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 403 SVATFKH----HTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 403 ~~~~~~~----h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
.+..+.. |.+....+ ++|++..+++++. .|++|.+||+......
T Consensus 358 l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~------------------------------ 406 (543)
T 1nir_A 358 LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP------------------------------ 406 (543)
T ss_dssp EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT------------------------------
T ss_pred EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc------------------------------
Confidence 6666653 55444444 5787556777775 5899999999764210
Q ss_pred EcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccc
Q psy4510 478 WHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNE 557 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~ 557 (812)
+.
T Consensus 407 ---~~--------------------------------------------------------------------------- 408 (543)
T 1nir_A 407 ---QY--------------------------------------------------------------------------- 408 (543)
T ss_dssp ---TT---------------------------------------------------------------------------
T ss_pred ---hh---------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEee-c----CcceEEEEeccccccccCCccccc
Q psy4510 558 RELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW-G----EVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~-~----~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
.....+.+..|.+.+..++++|++++|.+++- + .+++|.+||+.+....
T Consensus 409 ------------------~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-------- 462 (543)
T 1nir_A 409 ------------------AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK-------- 462 (543)
T ss_dssp ------------------BTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC--------
T ss_pred ------------------cCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC--------
Confidence 00012233344445667888999999998720 0 2789999999987621
Q ss_pred ccccccCCCCCCCCCCeee--------ecCCCCceEEEEeCCCCCCeEEec-----CCCceEEEEecCCCceeEEE
Q psy4510 633 EHNKKRGKGPGIPTPPLFS--------FSGHLTEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~--------~~gh~~~V~~l~~sp~~~~~las~-----s~Dg~v~iWd~~~~~~~~~~ 695 (812)
... +..|...+..++|+| +++.|..+ +.|++|.|||..+++.....
T Consensus 463 ----------------~~~~~v~~~~~~~~~~~~~~~~~~~~-~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 463 ----------------YQVLPIAEWADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp ----------------CEEECHHHHHCCCSSCCEEEEEEECS-SSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred ----------------eEEeechhhcccCCCCCceEeccCCC-CCCEEEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 122 245678999999999 66666644 34799999999998877665
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=231.90 Aligned_cols=219 Identities=16% Similarity=0.102 Sum_probs=164.9
Q ss_pred CCCceEEEEeCCCC----CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee--CCCceE
Q psy4510 175 HLTEGFAMDWSSTE----PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD--DPFQLA 248 (812)
Q Consensus 175 h~~~i~~~~~sp~~----~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~ 248 (812)
|.+.|.+++|+| + ++++++++. .+.+|++ +.++++.+++ .++.|+
T Consensus 110 ~~~~v~sla~sp-d~~~~~~~l~s~g~--~~~v~~l--------------------------~~g~lv~ss~~g~d~~V~ 160 (356)
T 2w18_A 110 EIREIRALFCSS-DDESEKQVLLKSGN--IKAVLGL--------------------------TKRRLVSSSGTLSDQQVE 160 (356)
T ss_dssp SEEEEEEECC-------CCEEEEEEEE--EEEEEEE--------------------------TTTEEEEEESSSTTCEEE
T ss_pred cccceEEEEECC-CccccccEEEeCCC--eEEEEec--------------------------CCCcEEEecccCCCCcEE
Confidence 567899999999 8 889999885 4888966 4455555533 578888
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC---CCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC---CCE
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS---TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT---NSV 322 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~---~~v 322 (812)
+|++... .+.+..+.+|...+..++|+| ++ .+|++|+.|++|+|||+.+++ ....+.+|. ..+
T Consensus 161 ~~~~s~d------G~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk----~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 161 VMTFAED------GGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQ----LLKKMHIDDSYQASV 229 (356)
T ss_dssp EEEECTT------SCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCC----EEEEEECCC---CCC
T ss_pred EEEECCC------CceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCc----EEEEEcCCCcceeee
Confidence 8887441 266677888999999999999 55 799999999999999999987 566666543 467
Q ss_pred EEEEEcCCCCeE-----------EEEEECCCeEEEEECCCCCcccceee----cCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 323 EDLQWSPGEKRV-----------LASCSVDLSIRIWDTRVINTKSCMLT----LPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 323 ~~~~~~p~~~~~-----------l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
.+++|+|++..+ +++|+.|++|++||..++ .++.. ++.+|...+.+..++ +.++++|+.|
T Consensus 230 ~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---k~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~D 304 (356)
T 2w18_A 230 CHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT---LSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTS 304 (356)
T ss_dssp EEEEEEETTEEEEEEC------------CCEEEEEEETTTT---EEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETT
T ss_pred EEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC---EEEEEEEeeccCCCcceeEccccC--CCEEEEEcCC
Confidence 888999999843 367889999999999854 33322 235676666555554 7799999999
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEE-EEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVT-TVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
|+|+|||++ .++.+.++.+|...+. .++|+|++ .+|++|+.|++|+|||+.
T Consensus 305 gTIkIWDl~---tGk~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 305 GTIAIWDLL---LGQCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SCEEEEETT---TCSEEEEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEEC
T ss_pred CcEEEEECC---CCcEEEEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecCC
Confidence 999999998 6889999999987665 58999997 699999999999999963
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-24 Score=239.55 Aligned_cols=314 Identities=10% Similarity=-0.003 Sum_probs=234.4
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEEC--CCCCcccc
Q psy4510 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT--RVINTKSC 357 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~--~~~~~~~~ 357 (812)
|+|++ .++++++.+++|.+||..+++ ....+..+.. +..++|+|+++ .|++++.|++|++||+ .+ ..+
T Consensus 145 ~~p~~-~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~-~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t---~~~ 214 (543)
T 1nir_A 145 LDLPN-LFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA-VHISRMSASGR-YLLVIGRDARIDMIDLWAKE---PTK 214 (543)
T ss_dssp CCGGG-EEEEEEGGGTEEEEEETTTCC----EEEEEECSTT-EEEEEECTTSC-EEEEEETTSEEEEEETTSSS---CEE
T ss_pred cCCCC-EEEEEEcCCCeEEEEECCCce----EEEEEecCcc-cceEEECCCCC-EEEEECCCCeEEEEECcCCC---CcE
Confidence 78887 788999999999999999887 4445552222 88999999999 5888899999999999 53 444
Q ss_pred eeecCCcCCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEecCCCCCCCceEEccc----------C-CCCEEEEEEcc
Q psy4510 358 MLTLPNAHTSDVNVISWNR----TEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKH----------H-TAPVTTVEWHP 421 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~----------h-~~~v~~v~~~p 421 (812)
+.++. +...+..++|+| +|+++++++. +++|.+||.. +.+++..+.. | ...+.++.++|
T Consensus 215 ~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~---t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 215 VAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE---TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp EEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT---TCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred EEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc---ccccceeecccCcccCccccccCCceEEEEECC
Confidence 55552 455689999999 9998888874 8999999987 4566666653 2 23789999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
++..++++...+++|.+||+...+.. . +..
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l----------------~--------~~~-------------------------- 319 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNL----------------T--------VTS-------------------------- 319 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSC----------------E--------EEE--------------------------
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcc----------------e--------eEE--------------------------
Confidence 88888888888999999998765210 0 000
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 320 -------------------------------------------------------------------------------- 319 (543)
T 1nir_A 320 -------------------------------------------------------------------------------- 319 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC----CCC
Q psy4510 582 YFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG----HLT 657 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----h~~ 657 (812)
..+...+..++|+|+|++++++. ..+++|.+||+.+++ ++..+.. |.+
T Consensus 320 --i~~~~~~~~~~~spdg~~l~va~-~~~~~v~v~D~~tg~-------------------------l~~~i~~g~~ph~g 371 (543)
T 1nir_A 320 --IGAAPFLHDGGWDSSHRYFMTAA-NNSNKVAVIDSKDRR-------------------------LSALVDVGKTPHPG 371 (543)
T ss_dssp --EECCSSCCCEEECTTSCEEEEEE-GGGTEEEEEETTTTE-------------------------EEEEEECSSSBCCT
T ss_pred --eccCcCccCceECCCCCEEEEEe-cCCCeEEEEECCCCe-------------------------EEEeeccCCCCCCC
Confidence 00011334578999999887663 568999999999886 4444442 655
Q ss_pred ceEEEEeCCCCCCeEEecC-CCceEEEEecCC-------CceeEE----------EEecCCCCEEEeec-------CCCe
Q psy4510 658 EGFAMDWSSTEPGVLATGD-CKRNIHIWTPRE-------AGAWSV----------YLYTNRFGVLATGD-------CKRN 712 (812)
Q Consensus 658 ~V~~l~~sp~~~~~las~s-~Dg~v~iWd~~~-------~~~~~~----------~~~s~dg~~lasgs-------~dg~ 712 (812)
....+ ++|+++.+++|+. .|++|++|++.+ .+++.. +.++|+|++|++++ .+++
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~ 450 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 450 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce
Confidence 44444 4674577888876 689999999987 444322 35899999999987 2779
Q ss_pred EEEeecCCCCCccccccc--------ccCCCcceeEeEEecCCceeEEee----ccCCceEEeeecCcce
Q psy4510 713 IHIWTPREAGAWQVDQKP--------LVGHTNSVEDLQWSPGEKRVLASC----SVDRSNRIGARRDMLY 770 (812)
Q Consensus 713 i~iwd~~~~~~~~~~~~~--------~~gH~~~V~~l~fs~dg~~~L~s~----s~Dg~i~iWd~~~~~~ 770 (812)
|.|||+.+++.. ... +..|...|..+.|+|+|+.+++|. +.|++|.|||.+.++.
T Consensus 451 v~v~d~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 451 VAVFDLKNLDAK---YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp EEEEETTCTTSC---CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred EEEEECCCCCCC---eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 999999998752 122 356678999999999999555553 3589999999999873
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=233.90 Aligned_cols=304 Identities=12% Similarity=0.101 Sum_probs=225.5
Q ss_pred CCCceEEEEeCCCCCCeEEEec----CCC----cEEEEcc--CCCCcccccccccCCCCCCeeeeeEcC-----------
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGD----CKR----NIHIWTP--REAGAWQVDQKPLGGHTNSAEDLQWSD----------- 233 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~----~dg----~v~iwd~--~~~~~~~~~~~~l~~h~~~V~~l~~s~----------- 233 (812)
+...+...+|++...+++++|+ .+| .|+|||+ .+++. .....+.+|...++.+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTV--LAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCE--EEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCE--EeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 3457778899995556787886 567 8999999 77762 12356888999999888875
Q ss_pred ---CCCcEEEeeCC------CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC---cEEEEe
Q psy4510 234 ---LKTALQTVDDP------FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR---NIHIWT 301 (812)
Q Consensus 234 ---~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg---~i~vwd 301 (812)
.+..++.++.+ +.|++||+.. .....+.+|...+.+++|+|++ ..|++++.++ .|++||
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g--------~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d 209 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDG--------YNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQT 209 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTS--------CSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCC--------CCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEE
Confidence 25667766654 7999999975 4567788899999999999999 7888888775 999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe--EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
+.++. ...+..|...+.+++|+|+++.++++++.++. |++||++++. ...+ ..|...+.+++|+|+|+
T Consensus 210 ~~tg~-----~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l-~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 210 LANGA-----VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQV-TDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp TTTCC-----EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEEC-CCCSSCEEEEEECTTSS
T ss_pred CCCCc-----EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeC-cCCCCcccceEECCCCC
Confidence 99876 23466788899999999999975557777665 9999998532 2344 56788999999999999
Q ss_pred EEEEEeC-CC--cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC---CCEEEEEcCCCCchhHHHhh
Q psy4510 380 LIVSGGD-DG--CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD---DQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 380 ~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~ 453 (812)
+|++++. ++ .|.+||+.. + ....+..|...+.+++|+|++. +|++++.+ ..|.+||+.+..
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~---~-~~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~-------- 346 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNING---G-APQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGG-------- 346 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTS---S-CCEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCC--------
T ss_pred EEEEEECCCCCcEEEEEECCC---C-CEEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCCC--------
Confidence 8887775 45 577778863 2 3455666778899999999984 66666653 589999998763
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC---eEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG---FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
......+ ..+..++|+|++..+++++..++ +.+|+ ... ........+.+.|.+++|+|.
T Consensus 347 ---------~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d-~~g--~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 347 ---------VQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVS-TDG--RFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp ---------EEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEE-TTS--CCEEECCCSSSEEEEEEECCC
T ss_pred ---------EEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEE-CCC--CcEEEeeCCCCCCcCCccccc
Confidence 2222222 37899999999976766666654 33333 222 223334455678999999997
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-24 Score=232.44 Aligned_cols=298 Identities=10% Similarity=0.038 Sum_probs=221.5
Q ss_pred CCcEEEEEecCCCCCEEEEEe----CCC----cEEEEeC--CCCCcceeccccccCCCCCEEEEEEcC------------
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD----CKR----NIHIWTP--REAGAWQVDQKPLVGHTNSVEDLQWSP------------ 329 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~----~dg----~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~~~~~p------------ 329 (812)
...+...+|++.+..++++|+ .+| .|+|||+ .+++. .....+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTV--LAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCE--EEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCE--EeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 357788899999977888886 467 8999999 77662 12345778888888777765
Q ss_pred --CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCC
Q psy4510 330 --GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRF 398 (812)
Q Consensus 330 --~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~ 398 (812)
.+.. ++.++.+ +.|++||+... ....+ ..|...+.+++|+|+|++|++++.++ .|++||++.
T Consensus 140 ~~~~~~-l~~~s~~~~~~~~~~i~i~d~~g~----~~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t- 212 (415)
T 2hqs_A 140 GAFRTR-IAYVVQTNGGQFPYELRVSDYDGY----NQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN- 212 (415)
T ss_dssp CCTTCE-EEEEEECSSSSCCEEEEEEETTSC----SCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-
T ss_pred CcCCCE-EEEEEecCCCCccceEEEEcCCCC----CCEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-
Confidence 2454 4444443 79999999732 23444 56888999999999999999999875 999999974
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
++. ..+..|...+.+++|+|++..++++++.++. |++||+.+.+. .
T Consensus 213 --g~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-----------------~------------ 260 (415)
T 2hqs_A 213 --GAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-----------------R------------ 260 (415)
T ss_dssp --CCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----------------E------------
T ss_pred --CcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-----------------E------------
Confidence 333 4566788899999999998544447776665 88888865410 0
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDN 556 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (812)
T Consensus 261 -------------------------------------------------------------------------------- 260 (415)
T 2hqs_A 261 -------------------------------------------------------------------------------- 260 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc--eEEEEeccccccccCCccccccc
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG--KVGIWDLKTALQTVDDPFQLAEH 634 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg--~I~iwd~~~~~~~~~~~~~~~~~ 634 (812)
.+..|...+.+++|+|+|++|++++ ..++ .|++||+.++.
T Consensus 261 -------------------------~l~~~~~~~~~~~~spdg~~l~~~s-~~~g~~~i~~~d~~~~~------------ 302 (415)
T 2hqs_A 261 -------------------------QVTDGRSNNTEPTWFPDSQNLAFTS-DQAGRPQVYKVNINGGA------------ 302 (415)
T ss_dssp -------------------------ECCCCSSCEEEEEECTTSSEEEEEE-CTTSSCEEEEEETTSSC------------
T ss_pred -------------------------eCcCCCCcccceEECCCCCEEEEEE-CCCCCcEEEEEECCCCC------------
Confidence 0111223567788999999888873 2345 67777887764
Q ss_pred ccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC---ceEEEEecCCCce--------eEEEEecCCCCE
Q psy4510 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREAGA--------WSVYLYTNRFGV 703 (812)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D---g~v~iWd~~~~~~--------~~~~~~s~dg~~ 703 (812)
...+..|...+.+++|+| ++++|++++.+ ..|++||+.+++. ....+|+|||++
T Consensus 303 --------------~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~ 367 (415)
T 2hqs_A 303 --------------PQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTM 367 (415)
T ss_dssp --------------CEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSE
T ss_pred --------------EEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCE
Confidence 233455777899999999 78888887764 6899999998654 344579999999
Q ss_pred EEeecCCC---eEEEeecCCCCCcccccccccCCCcceeEeEEecCCc
Q psy4510 704 LATGDCKR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 748 (812)
Q Consensus 704 lasgs~dg---~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~ 748 (812)
|++++.++ .|++|++..+ ....+.+|.+.|.+++|||...
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~-----~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGR-----FKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSC-----CEEECCCSSSEEEEEEECCCCC
T ss_pred EEEEEcCCCccEEEEEECCCC-----cEEEeeCCCCCCcCCccccccc
Confidence 99988877 8999998754 3567899999999999999754
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-23 Score=246.57 Aligned_cols=232 Identities=13% Similarity=0.086 Sum_probs=164.9
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCC---CeeeeeEcCCCCcEEEeeCC---------C
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN---SAEDLQWSDLKTALQTVDDP---------F 245 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~s~~~d---------~ 245 (812)
.+.+++|+| +|+++++ +.||+|++||+.+++ ....+.+|.. .|.+++|||||++|++++.+ +
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~----~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNT----STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCC----CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEECCCCc----EEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 466789999 9998877 679999999999886 4455556654 49999999999999999764 6
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-----
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN----- 320 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~----- 320 (812)
.+.+||+.++. .+.+....+|...+..++|||+| ..|+.++. +.|++|++.++.. ......+..
T Consensus 92 ~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~----~~~~~~~~~~~~~~ 160 (723)
T 1xfd_A 92 YYVLSKIPHGD-----PQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQA----IRVVSTGKEGVIYN 160 (723)
T ss_dssp EEEEEESSSCC-----CEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCC----EEEECCCBTTTEEE
T ss_pred eEEEEECCCCc-----eEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCce----EEEecCCCCCceEC
Confidence 78899998862 12222233455568899999999 67787775 7999999988763 222222222
Q ss_pred -------------CEEEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 321 -------------SVEDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 321 -------------~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
.+.+++|+|+|+. |++++ .++.+++|++.... ..+...+..+.|.++|.. ..
T Consensus 161 g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~G~~----~~ 226 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYT---------GSIYPTVKPYHYPKAGSE----NP 226 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCS---------SSSSCCCEEEECCBTTSC----CC
T ss_pred cccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccC---------CcCCCcceeccCCCCCCC----CC
Confidence 2378999999996 55554 45678888875321 112345788999887752 33
Q ss_pred CCcEEEEecCCCCCCCceEEcccC------CCCEEEEEEccCCCcEEEEEEC----CCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHH------TAPVTTVEWHPTESSTFASGGA----DDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~s~~~----dg~v~iwd~~~~ 444 (812)
+..|++||+.. +.....+..+ ...+.+++|+|++ ++|++.+. +..|.+||+.+.
T Consensus 227 ~~~l~~~d~~~---~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 227 SISLHVIGLNG---PTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEEEESSS---SCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeEEEEEECCC---CceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCCC
Confidence 45899999974 3334455443 6678999999997 46665543 246888887765
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-22 Score=235.38 Aligned_cols=201 Identities=10% Similarity=0.058 Sum_probs=145.0
Q ss_pred CCCeeeeeEcCCCCcEEEeeC-CC-----ceEEeeCCCCCCCCCCCCCceEEcCCC------------------------
Q psy4510 223 TNSAEDLQWSDLKTALQTVDD-PF-----QLAEHNKKRGKGPGIPTPPLFSFSGHL------------------------ 272 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~-d~-----~i~vwd~~~~~~~~~~~~~~~~~~~h~------------------------ 272 (812)
...|.+++|||||++|++++. ++ .|++||+.++ +....+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-------QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC-------CEEEEECGGGTC--------------------CC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC-------ceeEccchhhcccccccccchhhhhhhhhhhccc
Confidence 457999999999999999998 88 8999999885 3344444332
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..+.+++|||+| .+|++++. +.|++||+.++... ....+..|...+.+++|+|+|+. |+.++ ++.|++||+.++
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~--~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKA--AVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTT--SCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTT
T ss_pred cCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcc--eEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCC
Confidence 237899999999 78888776 99999999887200 13456678888999999999994 77766 569999999853
Q ss_pred CcccceeecCCcCCCC----------------eEEEEEcCCCCEEEEEeCCC----------------------------
Q psy4510 353 NTKSCMLTLPNAHTSD----------------VNVISWNRTEPLIVSGGDDG---------------------------- 388 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~----------------v~~l~~~~~~~~l~sg~~dg---------------------------- 388 (812)
. . ..+...+... +.+++|+|+|++|++++.|+
T Consensus 183 ~---~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 258 (741)
T 2ecf_A 183 R---Q-MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD 258 (741)
T ss_dssp E---E-EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS
T ss_pred C---E-EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC
Confidence 2 2 2221223222 47899999999888887665
Q ss_pred -----cEEEEecCCCCCCCceEEcc--cCCCCEEEEEEccCCCcEEEEEEC-----CCCEEEEEcCCC
Q psy4510 389 -----CIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGA-----DDQIALWDLAVE 444 (812)
Q Consensus 389 -----~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~-----dg~v~iwd~~~~ 444 (812)
.|.+||+.. .++...... .|...+.+++| |++. .|++++. +..|.+||+.+.
T Consensus 259 ~~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 259 ANVQVKLGVISPAE--QAQTQWIDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp CCCEEEEEEECSST--TCCCEEECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCeeEEEEEECCC--CCceEEecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCCC
Confidence 788888863 033333332 47778899999 9875 5555443 456888887665
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-22 Score=232.80 Aligned_cols=317 Identities=9% Similarity=0.036 Sum_probs=222.3
Q ss_pred CCceEEEEeCCCCCCeEEEecC-CC-----cEEEEccCCCCcccccccccCCCC------------------------CC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-KR-----NIHIWTPREAGAWQVDQKPLGGHT------------------------NS 225 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-dg-----~v~iwd~~~~~~~~~~~~~l~~h~------------------------~~ 225 (812)
...+.+++||| +|++||+++. |+ .|++||+.+++. ...+..+. ..
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQT----RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCE----EEEECGGGTC--------------------CCEE
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCce----eEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 45689999999 9999999988 88 899999988763 22232222 34
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~ 305 (812)
|.+++|||||++|++++. +.|++|++.++. ......+..|...+..++|||+| .+|+.++ ++.|++||+.++
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~-----~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEG-----KAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCS-----TTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTT
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCC-----cceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCC
Confidence 899999999999999887 999999998741 00445677788899999999999 7888877 469999999876
Q ss_pred CcceeccccccCCCCC----------------EEEEEEcCCCCeEEEEEECCC---------------------------
Q psy4510 306 GAWQVDQKPLVGHTNS----------------VEDLQWSPGEKRVLASCSVDL--------------------------- 342 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~----------------v~~~~~~p~~~~~l~s~~~dg--------------------------- 342 (812)
.. ......+... +..++|+|+|+. |++++.|+
T Consensus 183 ~~----~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 183 RQ----MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp EE----EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred CE----EEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 52 2222222222 478999999995 66666554
Q ss_pred ------eEEEEECCC-CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEecCCCCCCCceEEcccC
Q psy4510 343 ------SIRIWDTRV-INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-----DGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 343 ------~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
.|++||+.+ +... .......|...+..++| |+|++|++++. ++.|++||+.. ++....+..+
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~ 331 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQRVLAHET 331 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCEEEEEEEE
T ss_pred CCCCeeEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---CceEEEEEcC
Confidence 788899875 4321 11111257788999999 99998886653 56799999973 5555555544
Q ss_pred CC----CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE-EEcCCCCCE
Q psy4510 411 TA----PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL-HWHPQLPGT 485 (812)
Q Consensus 411 ~~----~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~ 485 (812)
.. .+..++|+|++. ++++++.|+.++||.+.... .......+...+..+ .|+|++..+
T Consensus 332 ~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~----------------~~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG----------------KAAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSS----------------CEEESCCSSSCEEEEEEEETTTTEE
T ss_pred CCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCC----------------CeeeeeecceEEEeEeEEeCCCCEE
Confidence 43 456899999985 88899999988999876431 111222334567777 599998777
Q ss_pred EEEEeCC---CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 486 IISTANS---GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 486 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
++++..+ ...+|.......... .......+..++|+|++..+++...+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g~~~~--~l~~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQGGQPQ--RLSKAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTCCCCE--ECCCSCSEEEEEECTTSSEEEEEEEE
T ss_pred EEEEeCCCCceEEEEEEEcCCCCee--ecccCCCceEEEECCCCCEEEEEecC
Confidence 7777665 466776543222111 11224568899999996555555443
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=201.25 Aligned_cols=259 Identities=15% Similarity=0.104 Sum_probs=191.4
Q ss_pred EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC-CCCCCCCCCCceEEcCC-
Q psy4510 194 TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR-GKGPGIPTPPLFSFSGH- 271 (812)
Q Consensus 194 t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~h- 271 (812)
+++.++.|++||+.+++ ...+..|...|.+++|+|++++|++++ ++.|.+|++.+ + ++.....+|
T Consensus 17 ~~~~~~~i~~~d~~~~~-----~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~-------~~~~~~~~~~ 83 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK-----MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP-------SPEKVDTGFA 83 (297)
T ss_dssp -CCCCEEEEEEETTTTE-----EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC-------SCEECCCTTC
T ss_pred CCCcceeEEEEeCCCCc-----eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC-------CceEeccccc
Confidence 45678999999998765 234566899999999999999999986 78999999987 5 444445555
Q ss_pred CCcEEEEEecCCCCCEEEEEe--CCCcEEEEeC--CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD--CKRNIHIWTP--REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
...+.+++|+|++ .+|++++ .++.+.||.+ ..+. ...+..+ ..+..++|+|+++.++++++.++.++||
T Consensus 84 ~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 84 TICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT-----PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp CCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC-----CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred cccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc-----eEEeecC-CCccceEECCCCCEEEEEECCCCceEEE
Confidence 3678899999999 7888887 3345555554 4432 2333333 3489999999999766688899999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
+++... .....+ ..+...+.+++|+|++++|+.++ .++.+++|++.. ....+..+..|...+..++|+|++ .+
T Consensus 157 ~~~~~~--~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg-~~ 230 (297)
T 2ojh_A 157 SMDIDS--GVETRL-THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV--DGSSVERITDSAYGDWFPHPSPSG-DK 230 (297)
T ss_dssp EEETTT--CCEEEC-CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET--TSSCEEECCCCSEEEEEEEECTTS-SE
T ss_pred EEECCC--CcceEc-ccCCCccccceECCCCCEEEEEecCCCCccEEEECC--CCCCcEEEecCCcccCCeEECCCC-CE
Confidence 975321 223334 56778899999999999777655 589999999864 345677788888889999999997 46
Q ss_pred EEEEECC-----------CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 427 FASGGAD-----------DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 427 l~s~~~d-----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
|++++.+ +.|.+||+...+.. .+.....+...+..++|+|++..+++++..+
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE--------------TLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCE--------------EEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCce--------------eeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6666654 56999999876421 2333334456789999999987666666554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-20 Score=196.42 Aligned_cols=299 Identities=8% Similarity=0.044 Sum_probs=196.8
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 357 (812)
..|.+++...+++++.++.|.+||+.+++ ....+..+...+ .++|+|+++.+++++..++.|.+||+.+... .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE----ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--K 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC----EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc----eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--e
Confidence 34666664668888899999999999876 333344455566 9999999997666666689999999985432 0
Q ss_pred eeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
...+ ..+.....+++|+|++++++++..++ .|.+||+. .++.+..+.. .....+++|+|++..++++...++
T Consensus 76 ~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 76 VVAI-QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL---KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp EEEE-EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT---TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTT
T ss_pred EEec-ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC---CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCC
Confidence 3333 44555555599999999888655553 89999997 4555666554 445689999999866677777778
Q ss_pred C-EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC
Q psy4510 435 Q-IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG 513 (812)
Q Consensus 435 ~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (812)
. |.+|++..... +.... .
T Consensus 151 ~~i~~~~~~~~g~---------------------------------------~~~~~--~-------------------- 169 (331)
T 3u4y_A 151 NTVRRFKIDADGV---------------------------------------LFDTG--Q-------------------- 169 (331)
T ss_dssp TEEEEEEECTTCC---------------------------------------EEEEE--E--------------------
T ss_pred ceEEEEEECCCCc---------------------------------------EeecC--C--------------------
Confidence 8 99999874310 00000 0
Q ss_pred CCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEE
Q psy4510 514 QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRV 593 (812)
Q Consensus 514 ~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 593 (812)
...........+
T Consensus 170 --------------------------------------------------------------------~~~~~~~~~~~~ 181 (331)
T 3u4y_A 170 --------------------------------------------------------------------EFISGGTRPFNI 181 (331)
T ss_dssp --------------------------------------------------------------------EEECSSSSEEEE
T ss_pred --------------------------------------------------------------------ccccCCCCccce
Confidence 000001134678
Q ss_pred EEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-
Q psy4510 594 RTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL- 672 (812)
Q Consensus 594 ~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l- 672 (812)
+|+|+|++++++. ..++.|++||+.++.. ...+..+.. ...+..++|+| ++++|
T Consensus 182 ~~spdg~~l~v~~-~~~~~v~v~d~~~~~~----------------------~~~~~~~~~-~~~~~~~~~sp-dg~~l~ 236 (331)
T 3u4y_A 182 TFTPDGNFAFVAN-LIGNSIGILETQNPEN----------------------ITLLNAVGT-NNLPGTIVVSR-DGSTVY 236 (331)
T ss_dssp EECTTSSEEEEEE-TTTTEEEEEECSSTTS----------------------CEEEEEEEC-SSCCCCEEECT-TSSEEE
T ss_pred EECCCCCEEEEEe-CCCCeEEEEECCCCcc----------------------cceeeeccC-CCCCceEEECC-CCCEEE
Confidence 8999999776653 5689999999987651 001444443 35678899999 67644
Q ss_pred EecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEE
Q psy4510 673 ATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 752 (812)
Q Consensus 673 as~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~ 752 (812)
++...++.|.+||+.+++...+..+.. . +.........+.+++|+|||+++++
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------~------~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGH---------------------G------LLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEEC---------------------C------CCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred EEEcCCCEEEEEECCCCceeeeccccc---------------------c------cccCCCCcccccceEECCCCCEEEE
Confidence 455567889999987765533321110 0 0000111122367999999995456
Q ss_pred eeccCCceEEeeecCcc
Q psy4510 753 SCSVDRSNRIGARRDML 769 (812)
Q Consensus 753 s~s~Dg~i~iWd~~~~~ 769 (812)
++..+++|.|||+....
T Consensus 290 ~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 290 SANISRELKVFTISGKV 306 (331)
T ss_dssp EETTTTEEEEEETTSCE
T ss_pred ecCCCCcEEEEEecCCc
Confidence 67778899999998766
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-21 Score=201.09 Aligned_cols=311 Identities=9% Similarity=0.038 Sum_probs=195.5
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-CceEEeeCC--CCCCCCCCCCCce
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-FQLAEHNKK--RGKGPGIPTPPLF 266 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-~~i~vwd~~--~~~~~~~~~~~~~ 266 (812)
.++++++.++.|++|++...... .......|...+.+++|+|++++|++++.+ +.|.+|++. ++ ..+.+.
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-----~~~~~~ 78 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL--TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-----ALTFAA 78 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE--EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-----CEEEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcE--EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-----ceeecc
Confidence 34555588999999999643211 112223577789999999999999988876 999999997 33 123344
Q ss_pred EEcCCCCcEEEEEecCCCCCEEE-EEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
.+..+. .+..++|+|++ .+|+ ++..++.|.+|++..+.. ......+. ....+.+++|+|+++.+++++..++.|+
T Consensus 79 ~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 79 ESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLP-VGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEE-EEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred ccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcc-cccccccc-CCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 455444 78899999999 5554 445588999999962221 11223333 3346899999999996544444899999
Q ss_pred EEECCCCCccccee--ecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCc--eEEcc---cC---CCCE
Q psy4510 346 IWDTRVINTKSCML--TLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGSS--VATFK---HH---TAPV 414 (812)
Q Consensus 346 iwd~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~--~~~~~---~h---~~~v 414 (812)
+||+.......... .........+..++|+|++++++ ++..++.|.+|++... .+.. ...+. .. ...+
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccccCCc
Confidence 99998522222111 22223445788999999999665 4558899999999631 1111 22222 11 3457
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC-C
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS-G 493 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~-~ 493 (812)
..++|+|++..+++++..++.|.+||+...... ............+..++|+|++..++++...+ .
T Consensus 234 ~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDRTASLITVFSVSEDGSV-------------LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-------------EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred cceEECCCCCEEEEEecCCCEEEEEEEcCCCCc-------------eEEeeeecCCCccceEEECCCCCEEEEecCCCCe
Confidence 789999998645556667999999999832110 02222222233488999999987677766544 4
Q ss_pred eEEEEeC-CCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 494 FNIFRTI-SDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 494 ~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
+.+|..- .......+..........+++|.|+
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEE
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcc
Confidence 5666432 1222222222222234555666654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-20 Score=216.55 Aligned_cols=268 Identities=12% Similarity=0.117 Sum_probs=178.4
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCC-----------------CCCeeeeeEcCCCCcEEEee
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH-----------------TNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h-----------------~~~V~~l~~s~~~~~l~s~~ 242 (812)
..+.|+ ++.+++++.++ | +||+.+++.. ...+..| ...|.+++|||+ +.++.+
T Consensus 29 ~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~- 98 (706)
T 2z3z_A 29 VGLQWM---GDNYVFIEGDD-L-VFNKANGKSA---QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF- 98 (706)
T ss_dssp TTCEEE---TTEEEEEETTE-E-EEEC----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-
T ss_pred CCCcCc---CCeEEEEeCCc-E-EEECCCCcEe---eEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-
Confidence 335666 56677777777 8 9999988631 0122222 257999999999 666555
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC-----CCcceeccccccC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-----AGAWQVDQKPLVG 317 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~-----~~~~~~~~~~~~~ 317 (812)
.++.+++||+.++ ....+..+...+.+++|||+| ..|+++ .++.|++|++.+ +.. ......
T Consensus 99 ~~~~i~~~d~~~~--------~~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~----~~~~~~ 164 (706)
T 2z3z_A 99 TQGGLVGFDMLAR--------KVTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRA----IAVTID 164 (706)
T ss_dssp ETTEEEEEETTTT--------EEEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCC----EESCSC
T ss_pred ECCEEEEEECCCC--------ceEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCc----EEeccC
Confidence 3599999999874 234555677788899999999 677775 579999999987 552 221222
Q ss_pred CCC--------------CEEEEEEcCCCCeEEEEEE---------------------------------CCCeEEEEECC
Q psy4510 318 HTN--------------SVEDLQWSPGEKRVLASCS---------------------------------VDLSIRIWDTR 350 (812)
Q Consensus 318 h~~--------------~v~~~~~~p~~~~~l~s~~---------------------------------~dg~i~iwd~~ 350 (812)
+.. .+.+++|+|+|+. |++++ .+..|++||+.
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCeEcccchhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 222 2589999999995 66666 44689999998
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceEEcc--cCCC---CEEEEEEc
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRRFKKGSSVATFK--HHTA---PVTTVEWH 420 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~--~h~~---~v~~v~~~ 420 (812)
++... .......|...+.+++|+|+|+.|++++.++ .|++||+.. +.....+. .+.. .+.++.|+
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 244 TGKTV--YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp TTEEE--ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred CCceE--eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---CceeeEEEEccCCCeECccCCceee
Confidence 54321 1111135667899999999999888887765 899999974 32232222 2222 34678999
Q ss_pred c--CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE-EEEcCCCCCEEEEEeCCC
Q psy4510 421 P--TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE-LHWHPQLPGTIISTANSG 493 (812)
Q Consensus 421 p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~~~~~~~~~ 493 (812)
| ++ .++++++.|+.+++|.+..... .+.....+...+.. ++|+|++..+++++..++
T Consensus 319 p~~dg-~~l~~~~~~g~~~l~~~~~~~~---------------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 319 PGSNN-QFIWQSRRDGWNHLYLYDTTGR---------------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp TTCSS-EEEEEECTTSSCEEEEEETTSC---------------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred cCCCC-EEEEEEccCCccEEEEEECCCC---------------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 9 87 5888898999999998863211 22233334456766 799999876666665543
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-20 Score=192.75 Aligned_cols=288 Identities=9% Similarity=0.020 Sum_probs=193.3
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CCceEEeeCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~~i~vwd~~~~~~~~~ 260 (812)
+.|.+..+.++++++.++.|++||+.+++ ....+..+...+ +++|+|++++|++++. ++.|.+||..++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~----- 72 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE----ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE----- 72 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC----EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-----
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc----eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-----
Confidence 34556345567888999999999998876 334444555666 9999999997776665 889999999885
Q ss_pred CCCC-ceEEcCCCCcEEEEEecCCCCCEEEEEeCCC---cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 261 PTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 261 ~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg---~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
+. ...+..+.....+++|+|++ .+|+++..++ .|.+||+.++. ....+. +.....+++|+|+++.+++
T Consensus 73 --~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~----~~~~~~-~~~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 73 --PPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNK----FISTIP-IPYDAVGIAISPNGNGLIL 144 (331)
T ss_dssp --SCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTE----EEEEEE-CCTTEEEEEECTTSSCEEE
T ss_pred --ceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCC----eEEEEE-CCCCccceEECCCCCEEEE
Confidence 44 66666666666669999999 6777555543 89999998775 233333 3445799999999997777
Q ss_pred EEECCCe-EEEEECCCCCcccce-eecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCc---eEEcccC
Q psy4510 337 SCSVDLS-IRIWDTRVINTKSCM-LTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSS---VATFKHH 410 (812)
Q Consensus 337 s~~~dg~-i~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~---~~~~~~h 410 (812)
++..++. |.+|++......... ... .........++|+|+|+++ +++..++.|.+||+.. ++. +..+..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~---~~~~~~~~~~~~- 219 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN---PENITLLNAVGT- 219 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS---TTSCEEEEEEEC-
T ss_pred EecCCCceEEEEEECCCCcEeecCCcc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC---CcccceeeeccC-
Confidence 7777788 999998743211111 111 1334568999999999954 5555789999999974 444 666654
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+..++|+|++..++++...++.|.+||+.+.+... ....+..+............++|+|++..++++..
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-------VKSFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE-------EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee-------ecccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 35678899999985444555567889999998763210 00000000000000112356899999987777777
Q ss_pred CCCe-EEEEe
Q psy4510 491 NSGF-NIFRT 499 (812)
Q Consensus 491 ~~~~-~~~~~ 499 (812)
.++. .+|+.
T Consensus 293 ~~~~v~v~d~ 302 (331)
T 3u4y_A 293 ISRELKVFTI 302 (331)
T ss_dssp TTTEEEEEET
T ss_pred CCCcEEEEEe
Confidence 6654 45543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-20 Score=192.81 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=198.3
Q ss_pred CCceEEEEeCCCCCCeEEEecC-------CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCce
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-------KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQL 247 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-------dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i 247 (812)
...+..++|+| ++++|++++. ++.|.+||..+++. ...+.. ...+.+++|+|++++++.+ ..++.|
T Consensus 40 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 40 GKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEV----TQAIHN-DLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp ESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCE----EEEEEE-SSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred ccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeE----EEEEec-CCCcceEEECCCCCEEEEEecCCCEE
Confidence 35678899999 9988887763 56899999988763 222222 3457899999999966554 557999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCC---------cEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceecccccc
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLT---------EGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
.+||..++ +.+..+..+.. .+.+++|+|++ +++++++ .++.|.+||+.++. ....+.
T Consensus 114 ~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~----~~~~~~ 181 (353)
T 3vgz_A 114 TAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIK----LKTAIQ 181 (353)
T ss_dssp EEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTE----EEEEEC
T ss_pred EEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCc----eEEEec
Confidence 99999885 55555655432 27899999999 5555544 47899999998776 334444
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEec
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDL 395 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~ 395 (812)
.+...+.+++|+|+++. +++++.++.|.+||+.+......+..-..++...+..++|+|+++++++++ .++.|.+||+
T Consensus 182 ~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 45556889999999994 777788999999999854322221111123566788999999999666555 4599999999
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
. .++.+..+..... ..++|+|++..++++...++.|.+||+.+. ...........+..
T Consensus 261 ~---~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----------------~~~~~~~~~~~~~~ 318 (353)
T 3vgz_A 261 R---NGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----------------KVVKTFDTPTHPNS 318 (353)
T ss_dssp T---TCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT-----------------EEEEEEECCSEEEE
T ss_pred C---CCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC-----------------eEEEEEecCCCCCe
Confidence 7 4556666654332 579999998655566657899999999877 33333333457899
Q ss_pred EEEcCCCCCEEEEEeCC
Q psy4510 476 LHWHPQLPGTIISTANS 492 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~ 492 (812)
++|+|++..++++...+
T Consensus 319 ~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 319 LALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEECTTSCEEEEEEECC
T ss_pred EEEcCCCCEEEEEEccc
Confidence 99999987777776553
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-20 Score=194.37 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=176.8
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC-CCcccccccccCCC-CCCeeeeeEcCCCCcEEEee--CCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLGGH-TNSAEDLQWSDLKTALQTVD--DPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~-~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~l~s~~--~d~~i~v 249 (812)
+|...|.+++|+| ++++||+++ ++.|++||+.+ ++ .......| ...|.+++|+|++++|++++ .++..+|
T Consensus 39 ~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 39 QTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred cCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 5778899999999 999999987 78999999988 65 33344455 47899999999999999998 4456666
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|.+... ......+..+. .+..++|+|++..++++++.++.++||++..... ....+..+...+.+++|+|
T Consensus 113 ~~~~~~------~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~ 182 (297)
T 2ojh_A 113 YLLPST------GGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSP 182 (297)
T ss_dssp EEEETT------CCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECT
T ss_pred EEEECC------CCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECC
Confidence 665432 13344444443 4899999999944455888899999999653321 2345666788999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----------CcEEEEecCCC
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----------GCIHVWDLRRF 398 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----------g~i~iwd~~~~ 398 (812)
+++.+++++..++.+++|+++.. ...+..+ ..|...+.+++|+|++++|++++.+ +.|.+||+...
T Consensus 183 dg~~l~~~~~~~~~~~i~~~~~~--~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 183 DGRWIYFNSSRTGQMQIWRVRVD--GSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp TSSEEEEEECTTSSCEEEEEETT--SSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCEEEEEecCCCCccEEEECCC--CCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 99965555556999999998632 2233444 5677789999999999988887765 56999999742
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
+ ...+..+..|...+.+++|+|++. .|++++.+
T Consensus 260 ~-~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 292 (297)
T 2ojh_A 260 N-VETLFDLFGGQGTMNSPNWSPDGD-EFAYVRYF 292 (297)
T ss_dssp S-CEEEEEEEESTTTSCSCCBCTTSS-EEEEEEEC
T ss_pred C-ceeeeccCCCCcccccceECCCCC-EEEEEEec
Confidence 1 223455557888999999999985 66665544
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.3e-20 Score=193.16 Aligned_cols=258 Identities=10% Similarity=0.062 Sum_probs=175.0
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCC-CcEEEEccC--CCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCK-RNIHIWTPR--EAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~d-g~v~iwd~~--~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~v 249 (812)
.|...+.+++|+| ++++|++++.+ +.|++|++. ++.. .....+..+. .+.+++|+|++++|++++ .++.|.+
T Consensus 35 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGAL--TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCE--EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred ecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCce--eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 4556788899999 99988888776 999999997 3331 1222333333 889999999999887766 4888999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceecc--ccccCCCCCEEEEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQ 326 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~--~~~~~h~~~v~~~~ 326 (812)
|++..+. ....+..+..+ ..+.+++|+|++ ..|++++ .++.|++|++.+........ .........+.+++
T Consensus 111 ~d~~~~~----~~~~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
T 1ri6_A 111 TRLEDGL----PVGVVDVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV 184 (343)
T ss_dssp EEEETTE----EEEEEEEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE
T ss_pred EECCCCc----cccccccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE
Confidence 9995220 11334444443 458899999999 5666665 88999999998733211111 11122345788999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcc----cceeecCCcC--CCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCC
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLPNAH--TSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~--~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~ 399 (812)
|+|+++.+++++..++.|++|++...... .....+...+ ...+..++|+|++++|+ ++..++.|.+||+....
T Consensus 185 ~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 185 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 99999976666668999999999632111 1111121121 34677899999998666 55578999999997311
Q ss_pred -CCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCC
Q psy4510 400 -KGSSVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAV 443 (812)
Q Consensus 400 -~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~ 443 (812)
..+.+..+..+.. +.+++|+|++. +|++++ .++.|.+|++..
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~s~dg~-~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 265 SVLSKEGFQPTETQ-PRGFNVDHSGK-YLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CCEEEEEEEECSSS-CCCEEECTTSS-EEEEECTTTCEEEEEEEET
T ss_pred CceEEeeeecCCCc-cceEEECCCCC-EEEEecCCCCeEEEEEEcC
Confidence 1234444544444 88999999974 566655 689999996653
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=200.91 Aligned_cols=258 Identities=14% Similarity=0.121 Sum_probs=174.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-----------cccccccCCCCCCeeeeeEcCCCCcEE----Ee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-----------QVDQKPLGGHTNSAEDLQWSDLKTALQ----TV 241 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-----------~~~~~~l~~h~~~V~~l~~s~~~~~l~----s~ 241 (812)
..+..+++++ ++.+|++|+.++ |+||+....... .........|...|++++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578899999 999999999887 999875421100 000011124567899999999999999 78
Q ss_pred eCCCceEEeeCCCCCCCC-CCCCC---ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 242 DDPFQLAEHNKKRGKGPG-IPTPP---LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~-~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
+.|+.|++||+.++.... ...++ +..+.+|...|.+++|+|+...+|++|+.||+|++||++++. ......+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~----~~~~~~~ 190 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV----KVCATLP 190 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE----EEEEEEC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc----ceeeccC
Confidence 899999999986531000 01122 355677999999999999855899999999999999998874 3344566
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec---CCcCCCCeEEEEEcCCCCEEEE-EeCCCc----
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL---PNAHTSDVNVISWNRTEPLIVS-GGDDGC---- 389 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~~l~s-g~~dg~---- 389 (812)
|...|.+++|+|+++ +|++|+.||.|++||++ +.....+... ...|...|.+++|++++.++++ +..+|.
T Consensus 191 ~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 889999999999998 59999999999999998 2221111111 0123448999999998876544 334433
Q ss_pred --EEEEecCCCCCC--CceEEcc-------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 390 --IHVWDLRRFKKG--SSVATFK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 390 --i~iwd~~~~~~~--~~~~~~~-------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
+++|++++.+.. .....+. +...+-..+.+.++...++++.+..+.|.+....
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 899999863221 1112221 2222333444446654445555556667777654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.9e-20 Score=192.11 Aligned_cols=258 Identities=9% Similarity=0.042 Sum_probs=176.4
Q ss_pred CCCceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEee
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHN 251 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd 251 (812)
+...+..++|+| +|++++++. .++.|++|++.++.. .....+..+...+..++|+|+|++|++++ .++.+.+|+
T Consensus 38 ~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 38 ATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTA--HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp ECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEE--EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcE--EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 445567799999 998444443 268999999965542 12333455778899999999999998888 789999999
Q ss_pred CCCCCCCCCCCCCceEEcC---------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSG---------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNS 321 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~---------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~ 321 (812)
+.... ....+..+.. +...+.+++|+|++. +++++..++.|++|++...+.... ...+.. ....
T Consensus 115 ~~~~g----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~ 188 (347)
T 3hfq_A 115 IAADG----ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSE-QSVLTMEAGFG 188 (347)
T ss_dssp ECTTS----CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEE-EEEEECCTTCC
T ss_pred eCCCC----CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEE-eeeEEcCCCCC
Confidence 96421 1122233321 223588999999995 777777789999999984332111 111122 2336
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCC-cccceeecCCcC------CCCeEEEEEcCCCCEE-EEEeCCCcEEEE
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKSCMLTLPNAH------TSDVNVISWNRTEPLI-VSGGDDGCIHVW 393 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~------~~~v~~l~~~~~~~~l-~sg~~dg~i~iw 393 (812)
+..++|+|+++.+++++..++.|++|++.... ....+..+ ... ...+..++|+|+|++| +++..++.|.+|
T Consensus 189 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 189 PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV-KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE-ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee-eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 78899999999767777788999999987421 11111222 111 1458899999999966 566678999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC-CCCEEEEEcCC
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA-DDQIALWDLAV 443 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~iwd~~~ 443 (812)
++........+..+..+...+..++|+|++. +|++++. ++.|.+|++..
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 268 AVTADGHLTLIQQISTEGDFPRDFDLDPTEA-FVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EECGGGCEEEEEEEECSSSCCCEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred EECCCCcEEEeEEEecCCCCcCeEEECCCCC-EEEEEEcCCCcEEEEEEeC
Confidence 9974222245556666667789999999984 6666665 58999996653
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-20 Score=213.88 Aligned_cols=191 Identities=13% Similarity=0.094 Sum_probs=133.2
Q ss_pred eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCC---cEEEEEecCCCCCEEEEEeC---------C
Q psy4510 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVLATGDC---------K 294 (812)
Q Consensus 227 ~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~l~sg~~---------d 294 (812)
..++|+|+++++++ +.++.|++|++.++ ++...+.+|.. .+.+++|||+| .+|++++. +
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETG-------QSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSC-------CEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCC-------cEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecc
Confidence 37899999965554 46999999999885 44455554443 38899999999 77777765 6
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCe-----
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV----- 369 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v----- 369 (812)
+.|++||+.++... ....+ ...+..++|+|+|+. |+.++ ++.|++|++.++.. ......++...|
T Consensus 90 ~~i~~~d~~~g~~~--~~~~l---~~~~~~~~~SPDG~~-la~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 90 ATYYIYDLSNGEFV--RGNEL---PRPIQYLCWSPVGSK-LAYVY-QNNIYLKQRPGDPP---FQITFNGRENKIFNGIP 159 (719)
T ss_dssp EEEEEEETTTTEEC--CSSCC---CSSBCCEEECSSTTC-EEEEE-TTEEEEESSTTSCC---EECCCCCBTTTEEESSC
T ss_pred eEEEEEECCCCccc--cceec---CcccccceECCCCCE-EEEEE-CCeEEEEeCCCCCc---EEEecCCCcCCeEcccc
Confidence 89999999887520 00222 246889999999995 66665 78999999975432 221112332222
Q ss_pred ------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEecCCCCCCCc
Q psy4510 370 ------------NVISWNRTEPLIVSGGDDG----------------------------------CIHVWDLRRFKKGSS 403 (812)
Q Consensus 370 ------------~~l~~~~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~~~ 403 (812)
.+++|+|+|++|++++.|. .|++||+.. +..
T Consensus 160 ~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~---~~~ 236 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY---PAY 236 (719)
T ss_dssp CHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC---HHH
T ss_pred cceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC---CCc
Confidence 4899999999999887552 788999874 222
Q ss_pred e--------EEcccCCCCEEEEEEccCCCcEEEEEECCC----CEEEEE
Q psy4510 404 V--------ATFKHHTAPVTTVEWHPTESSTFASGGADD----QIALWD 440 (812)
Q Consensus 404 ~--------~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg----~v~iwd 440 (812)
. ..+.+|...+.+++|+|++ +++++....+ .|.+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEE
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEc
Confidence 1 1234688889999999995 5666644322 377777
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-19 Score=209.29 Aligned_cols=275 Identities=11% Similarity=0.107 Sum_probs=193.5
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC-
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR- 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~- 254 (812)
...|.+++||| + +.++.+. ++.|++||+.+++ ...+..+...+.+++|||+|++|+++ .++.|++|++.+
T Consensus 81 ~~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 81 AFPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARK-----VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp -CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTE-----EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred ccCceeEEECC-C-CeEEEEE-CCEEEEEECCCCc-----eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 35699999999 7 5555443 5899999998764 23445567789999999999999985 679999999987
Q ss_pred ----CCCCCCCCCCceEEcCCCCc--------------EEEEEecCCCCCEEEEEe------------------------
Q psy4510 255 ----GKGPGIPTPPLFSFSGHLTE--------------GFAMDWSSTEPGVLATGD------------------------ 292 (812)
Q Consensus 255 ----~~~~~~~~~~~~~~~~h~~~--------------v~~l~~sp~~~~~l~sg~------------------------ 292 (812)
+ +.......+... +.+++|||++ .+|++++
T Consensus 152 ~~~~g-------~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 152 GEGMS-------RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp TSCCC-------CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cccCC-------CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 5 233222333332 4789999999 7787776
Q ss_pred ---------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-----eEEEEECCCCCcccce
Q psy4510 293 ---------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-----SIRIWDTRVINTKSCM 358 (812)
Q Consensus 293 ---------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~ 358 (812)
.+..|++||+.++... .......|...+.+++|+|+++. |++++.++ .|++||+.++.....+
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTV--YLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEE--ECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceE--eeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 4467999999876521 11112256778999999999995 67766665 9999999864221112
Q ss_pred eecCCcCCC---CeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE-EEEccCCCcEEEEEEC
Q psy4510 359 LTLPNAHTS---DVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHPTESSTFASGGA 432 (812)
Q Consensus 359 ~~~~~~~~~---~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~l~s~~~ 432 (812)
.. ..+.. .+.+++|+| +|+++++++.+|.++||.+.. .+..+..+..|...+.+ +.|+|++..++++++.
T Consensus 301 ~~--~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~--~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 301 FV--ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT--TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EE--EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET--TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred EE--ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC--CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 11 12222 346789999 999999999999999998863 35667778888888887 7999998655555555
Q ss_pred CC----CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 433 DD----QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 433 dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
++ .|..||+..... ... .....+..++|+|++..++++....
T Consensus 377 ~~~~~~~l~~~d~~~~~~-----------------~~l-~~~~~~~~~~~spdg~~l~~~~~~~ 422 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGGKT-----------------KDL-TPESGMHRTQLSPDGSAIIDIFQSP 422 (706)
T ss_dssp SCTTCBEEEEEETTCCCC-----------------EES-CCSSSEEEEEECTTSSEEEEEEECS
T ss_pred CCCceEEEEEEEcCCCCc-----------------eec-cCCCceEEEEECCCCCEEEEEecCC
Confidence 55 566666655421 111 1234688999999987776665554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-19 Score=189.99 Aligned_cols=210 Identities=15% Similarity=0.079 Sum_probs=153.9
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC----C-----CCCCCceEEcCCCCcEEEEEecCCCCCEEE----
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP----G-----IPTPPLFSFSGHLTEGFAMDWSSTEPGVLA---- 289 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~----~-----~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~---- 289 (812)
...+..+++++++.++++++.++ +++|+....... . ....+... ..|...|.+++|+|++ .+|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg-~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDN-LTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTS-CEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCC-CEEEEEEe
Confidence 34688999999999999998888 888775321000 0 00011112 2356789999999999 6777
Q ss_pred EEeCCCcEEEEeCCCC-----Cc--ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC
Q psy4510 290 TGDCKRNIHIWTPREA-----GA--WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 290 sg~~dg~i~vwd~~~~-----~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 362 (812)
+|+.|+.|+|||+.+. .. .......+.+|...|.+++|+|++..+|++++.||+|++||+++. ..+...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~~~~~- 188 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VKVCAT- 188 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EEEEEE-
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cceeec-
Confidence 7888999999998654 10 001135567899999999999985558999999999999999854 333333
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-------CCCEEEEEEccCCCcEEE-EEECCC
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------TAPVTTVEWHPTESSTFA-SGGADD 434 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~~l~-s~~~dg 434 (812)
..|...|++++|+|+|++|++|+.||.|++||++ +.....+..| ...|.+++|++++ .+++ .+..+|
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg 263 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT----LQEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADG 263 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT----CCEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTC
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC----CcccccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCC
Confidence 4688899999999999999999999999999997 2333444333 3389999999976 3443 344454
Q ss_pred C------EEEEEcCCC
Q psy4510 435 Q------IALWDLAVE 444 (812)
Q Consensus 435 ~------v~iwd~~~~ 444 (812)
. +++|++...
T Consensus 264 ~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 264 TLETSPDVVMALLPKK 279 (434)
T ss_dssp CSSSCCEEEEEECCCT
T ss_pred ccCCCCceEEEEeccC
Confidence 3 899999865
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.83 E-value=6.8e-19 Score=205.55 Aligned_cols=281 Identities=10% Similarity=0.043 Sum_probs=187.0
Q ss_pred ceEEEEeCCCCCCeEEEecCC---------CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 178 EGFAMDWSSTEPGVLATGDCK---------RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~d---------g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
.|.+++||| +|++||+++.+ +.|++||+.+++. ..+....+|...+.+++|||+|++|+.++. +.|+
T Consensus 62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 588999999 99999998764 7888999988763 123344567777999999999999999886 7899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCc------------------EEEEEecCCCCCEEEEEeCCC---------------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTE------------------GFAMDWSSTEPGVLATGDCKR--------------- 295 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~------------------v~~l~~sp~~~~~l~sg~~dg--------------- 295 (812)
+|++.++ ........+... +.+++|||+| ..|++++.++
T Consensus 138 ~~~~~~g-------~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~ 209 (723)
T 1xfd_A 138 YCAHVGK-------QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSI 209 (723)
T ss_dssp EESSSSS-------CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSS
T ss_pred EEECCCC-------ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcC
Confidence 9999875 344444443332 2789999999 6777776543
Q ss_pred -------------------cEEEEeCCCCCcceeccccccC------CCCCEEEEEEcCCCCeEEEEEEC----CCeEEE
Q psy4510 296 -------------------NIHIWTPREAGAWQVDQKPLVG------HTNSVEDLQWSPGEKRVLASCSV----DLSIRI 346 (812)
Q Consensus 296 -------------------~i~vwd~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~l~s~~~----dg~i~i 346 (812)
.|++||+.++.. ...+.. +...+..++|+|+|+ ++++.+. +..|++
T Consensus 210 ~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTL 284 (723)
T ss_dssp SCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEE
T ss_pred CCcceeccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEE
Confidence 799999987762 222332 367899999999998 4655543 357999
Q ss_pred EECCCCCcccceeecCCcCCCCeE----EEEEcCCCCEEEE--EeCCC------cEEEEecCCCCCCC--ceEEcccCCC
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVN----VISWNRTEPLIVS--GGDDG------CIHVWDLRRFKKGS--SVATFKHHTA 412 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~----~l~~~~~~~~l~s--g~~dg------~i~iwd~~~~~~~~--~~~~~~~h~~ 412 (812)
||+.++. +...+...+...+. .++|+|+|+.|+. +..++ .|.+||+.. .+. ....+..+..
T Consensus 285 ~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~--~~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 285 CDATTGV---CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP--NSSNDNIQSITSGDW 359 (723)
T ss_dssp EETTTCC---EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSC--CSSSCCCCBSCCSSS
T ss_pred EeCCCCc---ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccC--CCCccceeEeecCCe
Confidence 9998543 22222123334443 7899999995553 55677 566777322 222 1344444444
Q ss_pred CEEE-EEEccCCCcEEEEE-ECC--CCEEEEEcCCCCchhHHHhhhhhccCCCceEEe-ecCCCceeEEEEcCCCCCEEE
Q psy4510 413 PVTT-VEWHPTESSTFASG-GAD--DQIALWDLAVERDSEIEQREAELKDLPSQLLFI-HLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 413 ~v~~-v~~~p~~~~~l~s~-~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~ 487 (812)
.+.. ++|+|++. .|+.. ..+ +.+++|++....... . ..+.. ..+...+..++|+|++..+++
T Consensus 360 ~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~~~~~~~~-------~-----~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 360 DVTKILAYDEKGN-KIYFLSTEDLPRRRQLYSANTVGNFN-------R-----QCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp CEEEEEEEETTTT-EEEEEESSSCTTCCEEEEECSSTTCC-------C-----BCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred EEEeeeEEcCCCC-EEEEEEcCCCCcceEEEEEeCCCCCC-------c-----ceecccccCCCCeEEEEECCCCCEEEE
Confidence 5555 69999985 55544 444 789999987542100 0 00000 002345789999999877766
Q ss_pred EEeCCC
Q psy4510 488 STANSG 493 (812)
Q Consensus 488 ~~~~~~ 493 (812)
......
T Consensus 427 ~~~~~~ 432 (723)
T 1xfd_A 427 KCEGPG 432 (723)
T ss_dssp ECCSSS
T ss_pred EccCCC
Confidence 655443
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-19 Score=201.96 Aligned_cols=261 Identities=10% Similarity=0.021 Sum_probs=186.5
Q ss_pred CCceEEEEeCCCCCCeEEEecC-CCcEEEEccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeC---CCceEEe
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDD---PFQLAEH 250 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~---d~~i~vw 250 (812)
..+|++++|+| ||+.||+++. ||+++||++.++. .+.+..|. ..|.+++|||+ +.+++++. +...++|
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~-----~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGE-----TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTE-----EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCC-----cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 46799999999 9999999876 9999999985543 23444555 68999999999 77777765 4556676
Q ss_pred eCCC--CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 251 NKKR--GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 251 d~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
.+.. .. ... .+..+. .+...+|+|++..++++.+.++.+.+||+.++.. ..+..+.. .+++|+
T Consensus 94 ~~~~~~~g------~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----~~l~~~~~--~~~~~s 158 (582)
T 3o4h_A 94 KVNTSRPG------EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----RELARLPG--FGFVSD 158 (582)
T ss_dssp EEETTSTT------CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----EEEEEESS--CEEEEE
T ss_pred EEeccCCC------ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----EEeecCCC--ceEEEC
Confidence 6543 20 111 333222 2346688998866655555556667999987752 22222333 899999
Q ss_pred CCCCeEEEEEECC----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEecCCCCCCC
Q psy4510 329 PGEKRVLASCSVD----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG--CIHVWDLRRFKKGS 402 (812)
Q Consensus 329 p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~ 402 (812)
|+|+ .|++++.+ +.|++||+.++. ...+ ..|...+..++|+|+|+.|+++..+| .|++||+. .+.
T Consensus 159 pDG~-~la~~~~~~~~~~~i~~~d~~~g~----~~~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~---~~~ 229 (582)
T 3o4h_A 159 IRGD-LIAGLGFFGGGRVSLFTSNLSSGG----LRVF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR---DGS 229 (582)
T ss_dssp EETT-EEEEEEEEETTEEEEEEEETTTCC----CEEE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT---TCC
T ss_pred CCCC-EEEEEEEcCCCCeEEEEEcCCCCC----ceEe-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC---CCc
Confidence 9999 57777766 789999987543 2344 56778899999999999999888888 89999997 344
Q ss_pred ceEEcccCCCCEEEEE--------EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 403 SVATFKHHTAPVTTVE--------WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~--------~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
.. .+..|...+..+. |+|++ .++++++.++++++|++ ++ ... .....+.
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~-----------------~~~--~~~~~v~ 286 (582)
T 3o4h_A 230 VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GE-----------------RVE--APQGNHG 286 (582)
T ss_dssp EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TE-----------------EEC--CCSSEEE
T ss_pred EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CC-----------------eec--cCCCceE
Confidence 44 6777777777777 99998 89999999999999999 32 111 1124678
Q ss_pred EEEEcCCCCCEEEEEeCC
Q psy4510 475 ELHWHPQLPGTIISTANS 492 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~ 492 (812)
+++|+ ++. ++++.+.+
T Consensus 287 ~~~~s-dg~-~l~~~s~~ 302 (582)
T 3o4h_A 287 RVVLW-RGK-LVTSHTSL 302 (582)
T ss_dssp EEEEE-TTE-EEEEEEET
T ss_pred EEEec-CCE-EEEEEcCC
Confidence 89999 654 44444433
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-18 Score=179.41 Aligned_cols=294 Identities=7% Similarity=-0.005 Sum_probs=189.2
Q ss_pred ceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEE
Q psy4510 104 QTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 183 (812)
Q Consensus 104 ~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~ 183 (812)
-..++++||.+... .+.|.+..+..- ...+ ..+... +...+..++
T Consensus 12 ~~~~~~vg~y~~~~-~~~i~~~~~d~~------------------------------~g~~--~~~~~~--~~~~p~~l~ 56 (361)
T 3scy_A 12 SELTMLVGTYTSGN-SKGIYTFRFNEE------------------------------TGES--LPLSDA--EVANPSYLI 56 (361)
T ss_dssp GEEEEEEEECCSSS-CCEEEEEEEETT------------------------------TCCE--EEEEEE--ECSCCCSEE
T ss_pred CceEEEEEeccCCC-CCCEEEEEEeCC------------------------------CCCE--EEeecc--cCCCCceEE
Confidence 34678999998764 478888876310 0011 111111 445667799
Q ss_pred eCCCCCCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCC
Q psy4510 184 WSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGP 258 (812)
Q Consensus 184 ~sp~~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~ 258 (812)
|+| ++++|++++.+ +.|.+|++...............+......+++ ++++|++++ .++.+.+|++....
T Consensus 57 ~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g-- 131 (361)
T 3scy_A 57 PSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG-- 131 (361)
T ss_dssp ECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS--
T ss_pred ECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC--
Confidence 999 99999988875 799999987642111123334445567777888 788777776 68899999997531
Q ss_pred CCCCCCceEE---c--------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc------ceec---cccccCC
Q psy4510 259 GIPTPPLFSF---S--------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------WQVD---QKPLVGH 318 (812)
Q Consensus 259 ~~~~~~~~~~---~--------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~---~~~~~~h 318 (812)
....+... . .+...+.+++|+|++..+++++..++.|++|++..... .... ......+
T Consensus 132 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (361)
T 3scy_A 132 --ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP 209 (361)
T ss_dssp --CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred --cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC
Confidence 11111111 1 12334688999999943455555689999999876542 1100 1112234
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec--CCcCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEe
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGD--DGCIHVWD 394 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd 394 (812)
...+..++|+|+++.+++++..++.|.+|++.++. ...+..+ ...+......++|+|+|++|+++.. ++.|.+|+
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 45678999999999655555579999999987432 1112221 1334456789999999998766655 48999999
Q ss_pred cCCCCCCC--ceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCC
Q psy4510 395 LRRFKKGS--SVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAV 443 (812)
Q Consensus 395 ~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~ 443 (812)
+... .+. .+..+.. ...+..++|+|++. +|++++ .++.|.+|++..
T Consensus 289 ~~~~-~g~~~~~~~~~~-g~~~~~~~~spdg~-~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 289 VDET-NGTLTKVGYQLT-GIHPRNFIITPNGK-YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ECTT-TCCEEEEEEEEC-SSCCCEEEECTTSC-EEEEEETTTTEEEEEEECT
T ss_pred EcCC-CCcEEEeeEecC-CCCCceEEECCCCC-EEEEEECCCCCEEEEEEEC
Confidence 9621 122 3444444 45678999999984 666665 678999976653
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-18 Score=178.27 Aligned_cols=279 Identities=10% Similarity=0.072 Sum_probs=182.3
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC---CCceEEeeCCCCCCCCCCCCCceEEcCCCC
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD---PFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 273 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~ 273 (812)
.++.|.+|.++...... .......+...+..++|+|+|+ |++++. ++.|.+|++.++ ..+.+..+..+..
T Consensus 14 ~~~~i~v~~~d~~tg~~-~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-----~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTL-TNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-----TAHKLNTVVAPGT 86 (347)
T ss_dssp SCCEEEEEEEETTTTEE-EEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-----EEEEEEEEEEESC
T ss_pred CCCCEEEEEEcCCCCeE-EEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-----cEEEeeeeecCCC
Confidence 35678888776532111 1122344567788999999999 666554 689999999764 2234555566777
Q ss_pred cEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceecccccc--C-------CCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 274 EGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLV--G-------HTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~--~-------h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
.+..++|+|++ .+|++++ .++.|.+|++...+.... ...+. + +...+.+++|+|+++ ++++...++.
T Consensus 87 ~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~ 163 (347)
T 3hfq_A 87 PPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTL-TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK 163 (347)
T ss_dssp CCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEE-EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeee-cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE
Confidence 88999999999 6666666 789999999964432111 11111 1 223588999999999 8888888999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCC--ceEEcccCC------CCE
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGS--SVATFKHHT------APV 414 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~--~~~~~~~h~------~~v 414 (812)
|++|++...........+.......+..++|+|+|++++ ++..++.|.+|++... .+. .+..+.... ..+
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcc
Confidence 999999832222222222122344678899999999554 4667899999998731 111 222332222 348
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG- 493 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~- 493 (812)
..++|+|++..++++...++.|.+|++...... ..+.....+...+..++|+|++..++++...++
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL-------------TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCE-------------EEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE-------------EEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc
Confidence 899999998545567777899999999732110 012222222346889999999876777666544
Q ss_pred eEEEEe
Q psy4510 494 FNIFRT 499 (812)
Q Consensus 494 ~~~~~~ 499 (812)
+.+|..
T Consensus 310 v~v~~~ 315 (347)
T 3hfq_A 310 ATLYAR 315 (347)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 556643
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.2e-19 Score=204.59 Aligned_cols=314 Identities=16% Similarity=0.091 Sum_probs=199.2
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCC---CeeeeeEcCCCCcEEEeeC---------CCceE
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN---SAEDLQWSDLKTALQTVDD---------PFQLA 248 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~s~~~---------d~~i~ 248 (812)
.++|+| ++.+++++ .|+.|++||+.+++ ....+.+|.. .|.+++|||||++|++++. ++.|+
T Consensus 20 ~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWIS-GQEYLHQS-ADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESS-SSEEEEEC-TTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECC-CCeEEEEc-CCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 579999 99766665 58999999999886 3344444443 4999999999999998876 78999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV------ 322 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v------ 322 (812)
+||+.++. ......+ ...+..++|||+| ..|+.+. ++.|++|++.++.... ....++...|
T Consensus 94 ~~d~~~g~-----~~~~~~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~---l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 94 IYDLSNGE-----FVRGNEL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQ---ITFNGRENKIFNGIPD 160 (719)
T ss_dssp EEETTTTE-----ECCSSCC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEE---CCCCCBTTTEEESSCC
T ss_pred EEECCCCc-----cccceec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEE---EecCCCcCCeEccccc
Confidence 99998862 1000112 2457889999999 6777775 7899999998775311 1112222222
Q ss_pred -----------EEEEEcCCCCeEEEEEECCC----------------------------------eEEEEECCCCCcc--
Q psy4510 323 -----------EDLQWSPGEKRVLASCSVDL----------------------------------SIRIWDTRVINTK-- 355 (812)
Q Consensus 323 -----------~~~~~~p~~~~~l~s~~~dg----------------------------------~i~iwd~~~~~~~-- 355 (812)
.+++|+|+|+. |++++.|. .|++||+.++...
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~ 239 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGP 239 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCC
T ss_pred ceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccce
Confidence 48999999995 77766542 7889999853211
Q ss_pred cce---eecCCcCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEe----cCCCCCCCceEEc----ccCCCCEE-----
Q psy4510 356 SCM---LTLPNAHTSDVNVISWNRTEPLIVSGGDD----GCIHVWD----LRRFKKGSSVATF----KHHTAPVT----- 415 (812)
Q Consensus 356 ~~~---~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd----~~~~~~~~~~~~~----~~h~~~v~----- 415 (812)
..+ ..+ ..|...+..++|+|+++++++.... ..|.+|| +.. ++....+ ..|...+.
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 240 QEVPVPAMI-ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT---WDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp EECCCCHHH-HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS---EECCGGGEEEEECSSSCSSSSSCC
T ss_pred eEccCCccC-CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC---CceEEEEecccccCCceEccccCC
Confidence 001 111 3577889999999998777764433 2488899 653 2222223 35666666
Q ss_pred EEEEccCCCcEEE-EEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-
Q psy4510 416 TVEWHPTESSTFA-SGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN- 491 (812)
Q Consensus 416 ~v~~~p~~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~- 491 (812)
.+.|+|++..+++ ++..+|. |.+||+.... ......+...+..+.+. ++..+++++..
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-----------------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-----------------AIQITSGKWEAINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-----------------CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCc-----------------eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence 7899999865544 3445664 5566665442 22222334457777777 66556655554
Q ss_pred ----CCeEEEEeCCCCC-cccEEeec----CCCCeeEEEEcCCCCCeEEEeeCC
Q psy4510 492 ----SGFNIFRTISDLP-SQLLFIHL----GQKEIKELHWHPQLPGTIISTANS 536 (812)
Q Consensus 492 ----~~~~~~~~~~~~~-~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~~~ 536 (812)
....+|....... ........ +...+..+.|+|++...++.....
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~ 431 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGP 431 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCB
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCC
Confidence 3466776543111 11111111 234677899999876555544433
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.3e-18 Score=192.34 Aligned_cols=264 Identities=12% Similarity=0.018 Sum_probs=188.5
Q ss_pred CCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEe
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWD 394 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd 394 (812)
..+|.+++|+|+|+. ||+++. ||+++||++.. . ....+...+...+..++|+|+ +++++++. +...++|.
T Consensus 21 ~~~~~~~~~~~DG~~-la~~s~~~g~~~lw~~~~---g-~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDK-LLVVGFSEGSVNAYLYDG---G-ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTE-EEEEEEETTEEEEEEEET---T-EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCe-EEEEEccCCceeEEEEcC---C-CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 457999999999995 666665 99999999852 2 234442334468999999999 77777765 45567766
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
+.....+... .+..+. .+...+|+|++..++++++.++.+.+||+.+.+. ...
T Consensus 95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----------------~~l-------- 147 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----------------REL-------- 147 (582)
T ss_dssp EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----------------EEE--------
T ss_pred EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----------------EEe--------
Confidence 6431122222 333222 3446788888866666666666677998865511 000
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
T Consensus 148 -------------------------------------------------------------------------------- 147 (582)
T 3o4h_A 148 -------------------------------------------------------------------------------- 147 (582)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc----ceEEEEeccccccccCCccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV----GKVGIWDLKTALQTVDDPFQ 630 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d----g~I~iwd~~~~~~~~~~~~~ 630 (812)
..+.. .+++|||||++|+++ +.+ +.|++||+.++.
T Consensus 148 -----------------------------~~~~~--~~~~~spDG~~la~~--~~~~~~~~~i~~~d~~~g~-------- 186 (582)
T 3o4h_A 148 -----------------------------ARLPG--FGFVSDIRGDLIAGL--GFFGGGRVSLFTSNLSSGG-------- 186 (582)
T ss_dssp -----------------------------EEESS--CEEEEEEETTEEEEE--EEEETTEEEEEEEETTTCC--------
T ss_pred -----------------------------ecCCC--ceEEECCCCCEEEEE--EEcCCCCeEEEEEcCCCCC--------
Confidence 00000 456789999999876 444 789999998875
Q ss_pred ccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCc--eEEEEecCCCceeEEE----------E--
Q psy4510 631 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWSVY----------L-- 696 (812)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg--~v~iWd~~~~~~~~~~----------~-- 696 (812)
...+.+|.+.+..++||| |++.|++++.++ .|++||+.+++.. .. +
T Consensus 187 ------------------~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 187 ------------------LRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp ------------------CEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred ------------------ceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 346778889999999999 889999888888 9999999987655 21 3
Q ss_pred ------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCc---eEEeeecC
Q psy4510 697 ------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS---NRIGARRD 767 (812)
Q Consensus 697 ------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~---i~iWd~~~ 767 (812)
|+|||.++++++.+++++||++ ++. .. .+.+.|.+++|| +|+ ++++++.+.+ +.+|+...
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~----~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GER----VE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEE----EC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCe----ec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 8999999999999999999999 542 22 234679999999 998 7888887754 66676553
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-17 Score=193.80 Aligned_cols=190 Identities=9% Similarity=0.062 Sum_probs=132.4
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc-----EEEEEecCCCCCEEEEEeCC---
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE-----GFAMDWSSTEPGVLATGDCK--- 294 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~sp~~~~~l~sg~~d--- 294 (812)
.....+++|+|++++++++ ++.|++|++.++ ++...+.+|... ...++|||++ .+|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~ 85 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYG-------NSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQ 85 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTC-------CEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEEC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCC-------ceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeee
Confidence 3456789999999988886 899999999986 455566776643 2347899999 777777765
Q ss_pred ------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 295 ------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 295 ------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
+.+.+||+.++. ...+..|...+...+|||+|+. ||.+ .++.|++|++.++... ..+. .++...
T Consensus 86 ~r~~~~~~~~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~--~lt~-~g~~~~ 155 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSY--RITW-TGKEDI 155 (740)
T ss_dssp SSSCEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCE--ECCS-CCBTTT
T ss_pred EEEccceEEEEEECCCCc-----EEEcccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceE--EEcC-CCCccc
Confidence 567799999875 3456677889999999999996 6666 4689999999754321 1111 233222
Q ss_pred e-----------------EEEEEcCCCCEEEEEeCC-CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 369 V-----------------NVISWNRTEPLIVSGGDD-GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 369 v-----------------~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
+ ..+.|+|+|+.||.++.| +.+.+|++....... .+...+..+.+.+.|..
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~------~~~~~~~~~~yp~~G~~----- 224 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES------LQYPKTVRVPYPKAGAV----- 224 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT------CSSCEEEEEECCBTTSC-----
T ss_pred eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC------CCCCcceeecCCCCcCc-----
Confidence 2 358999999988887655 448888875322111 34455677777766532
Q ss_pred ECCCCEEEEEcCC
Q psy4510 431 GADDQIALWDLAV 443 (812)
Q Consensus 431 ~~dg~v~iwd~~~ 443 (812)
....+|.+||+.+
T Consensus 225 ~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 225 NPTVKFFVVNTDS 237 (740)
T ss_dssp CCEEEEEEEETTS
T ss_pred CCeeEEEEEECCC
Confidence 1122578888876
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.8e-18 Score=178.94 Aligned_cols=296 Identities=9% Similarity=0.025 Sum_probs=184.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCC-CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTN-SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
.+|++++.++.|.+||+.++. ....+. ++.. .+..++|+|+++.++++++.++.|.+||+.++. .+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE---TLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC---EEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCc----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC---eEeeEEc
Confidence 478999999999999998875 233332 2222 478999999998777788888999999998543 3333322
Q ss_pred cC----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 364 AH----TSDVNVISWNRTEPLIVSGG------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 364 ~~----~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
.+ ...+.+++|+|++++++++. .++.|.+||+. .++.+..+.. ...+.+++|+|++. +|
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~-~l 149 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFEA-PRQITMLAWARDGS-KL 149 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEEC-CSSCCCEEECTTSS-CE
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC---CCcEEEEEeC-CCCcceeEECCCCC-EE
Confidence 22 22577899999999888875 57999999997 3455555543 45678899999985 55
Q ss_pred EEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE--EEEeCCCCCc
Q psy4510 428 ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN--IFRTISDLPS 505 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~ 505 (812)
+++ ++.|.+||+.+.+ .............+.|+|++..++++...++.. .|....
T Consensus 150 ~~~--~~~i~~~d~~~~~-----------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~---- 206 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGT-----------------LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR---- 206 (337)
T ss_dssp EEE--SSSEEEEETTTTE-----------------EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEB----
T ss_pred EEe--CCeEEEEECCCCc-----------------EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccc----
Confidence 555 6889999998763 221111111111226778776555444333321 111000
Q ss_pred ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEec
Q psy4510 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR 585 (812)
Q Consensus 506 ~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (812)
...++.... .....+..+.. .... ........
T Consensus 207 -----------------~~~~~~~~~----~~~~~v~~~d~---~~~~------------------------~~~~~~~~ 238 (337)
T 1pby_B 207 -----------------KDIDPADPT----AYRTGLLTMDL---ETGE------------------------MAMREVRI 238 (337)
T ss_dssp -----------------TTSCTTSGG----GEEEEEEEEET---TTCC------------------------EEEEEEEE
T ss_pred -----------------ccccccccc----ccccceEEEeC---CCCC------------------------ceEeecCC
Confidence 000000000 00000111111 1000 00112334
Q ss_pred ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeC
Q psy4510 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 665 (812)
Q Consensus 586 h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~s 665 (812)
+...+..++|+|+|++++++ ++.|++||+.+++ .+..+.. ...+.+++|+
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~----~~~v~~~d~~~~~-------------------------~~~~~~~-~~~~~~~~~s 288 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA----YNVLESFDLEKNA-------------------------SIKRVPL-PHSYYSVNVS 288 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE----ESEEEEEETTTTE-------------------------EEEEEEC-SSCCCEEEEC
T ss_pred CCCceeeEEECCCCCEEEEe----CCeEEEEECCCCc-------------------------CcceecC-CCceeeEEEC
Confidence 55677889999999998876 6899999998775 3333432 2467889999
Q ss_pred CCCCCeEEecCCCceEEEEecCCCceeEEE
Q psy4510 666 STEPGVLATGDCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 666 p~~~~~las~s~Dg~v~iWd~~~~~~~~~~ 695 (812)
| ++++|++++.++.|++||+.+++.....
T Consensus 289 ~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 289 T-DGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp T-TSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred C-CCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 9 7778888888899999998877665544
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-17 Score=174.75 Aligned_cols=273 Identities=10% Similarity=0.044 Sum_probs=190.7
Q ss_pred CCCeeeeeEcCCCCcEEEeeC-------CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 223 TNSAEDLQWSDLKTALQTVDD-------PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+..++|+|++++|++++. ++.|.+||..++ +.+..+.. ...+.+++|+|++..+++++..++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-------EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-------CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-------eEEEEEec-CCCcceEEECCCCCEEEEEecCCC
Confidence 346789999999999888774 568999999875 55555543 345788999999944666667789
Q ss_pred cEEEEeCCCCCcceeccccccCCCC---------CEEEEEEcCCCCeEEEEE-ECCCeEEEEECCCCCcccceeecCCcC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTN---------SVEDLQWSPGEKRVLASC-SVDLSIRIWDTRVINTKSCMLTLPNAH 365 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~ 365 (812)
.|.+||+.++.. ...+..+.. .+.+++|+|+++.+++++ +.++.|.+||+.+. ..+..+ ..+
T Consensus 112 ~v~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~---~~~~~~-~~~ 183 (353)
T 3vgz_A 112 AVTAIDAKTGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI---KLKTAI-QNT 183 (353)
T ss_dssp EEEEEETTTCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT---EEEEEE-CCC
T ss_pred EEEEEeCCCCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC---ceEEEe-cCC
Confidence 999999988762 233332221 278999999999655555 35889999999843 334444 334
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc----CCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH----HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
...+.+++|+|+++++++++.++.|.+||+. .++.+..+.. +...+.+++|+|++..++++...++.|.+||+
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTA---DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETT---TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECC---CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 5568889999999999999999999999997 3555555543 56678899999998645555555699999999
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEE
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 520 (812)
.+.+. ........ ...++|+|++..++++...++ +.+|+..... ..........+..+
T Consensus 261 ~~~~~-----------------~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~ 319 (353)
T 3vgz_A 261 RNGNI-----------------LAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---VVKTFDTPTHPNSL 319 (353)
T ss_dssp TTCCE-----------------EEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEEEECCSEEEEE
T ss_pred CCCcE-----------------EEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCe---EEEEEecCCCCCeE
Confidence 87732 11111112 356999999887777775554 5555543322 22222334478899
Q ss_pred EEcCCCCCeEEEeeC
Q psy4510 521 HWHPQLPGTIISTAN 535 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~ 535 (812)
+|+|++..++++...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 999996555555544
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-17 Score=172.07 Aligned_cols=280 Identities=10% Similarity=0.044 Sum_probs=178.3
Q ss_pred cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEEeeCCCCCCCCCCCCCceEEcCC
Q psy4510 196 DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAEHNKKRGKGPGIPTPPLFSFSGH 271 (812)
Q Consensus 196 ~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~h 271 (812)
+.++.|++|.++............ +...+..++|+|++++|++++.+ +.+.+|++..... ..+.+.....+
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~ 98 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTM 98 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECS
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccC
Confidence 346789999875432111122222 77888999999999999998875 7999999875200 12334444555
Q ss_pred CCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccc--c--------ccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQK--P--------LVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~--~--------~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
......+++ ++ .+|++++ .++.|.+|++...+....... . ...+...+.+++|+|+++.+++++..
T Consensus 99 ~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 99 GADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 667778888 66 5555554 688999999976542111110 0 11123346889999999976666667
Q ss_pred CCeEEEEECCCCCc------ccce---eecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEc---
Q psy4510 341 DLSIRIWDTRVINT------KSCM---LTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATF--- 407 (812)
Q Consensus 341 dg~i~iwd~~~~~~------~~~~---~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~--- 407 (812)
++.|++|++..... .... ......+......++|+|+|+++++++ .++.|.+|++.... ...+..+
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-~~~~~~~~~~ 254 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-LDEIQTVAAD 254 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-EEEEEEEESC
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-eEEeEEEecC
Confidence 89999999875332 1000 112234456688999999999777666 68999999997311 1112222
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEEC--CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
..+......++|+|++. +|+++.. ++.|.+|++...... ...+........+..++|+|++..+
T Consensus 255 ~~~~~~~~~i~~spdg~-~l~v~~~~~~~~i~v~~~~~~~g~-------------~~~~~~~~~g~~~~~~~~spdg~~l 320 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGK-YLYASNRLKADGVAIFKVDETNGT-------------LTKVGYQLTGIHPRNFIITPNGKYL 320 (361)
T ss_dssp SSCCCCEEEEEECTTSS-EEEEEECSSSCEEEEEEECTTTCC-------------EEEEEEEECSSCCCEEEECTTSCEE
T ss_pred CCCCCCcccEEECCCCC-EEEEECCCCCCEEEEEEEcCCCCc-------------EEEeeEecCCCCCceEEECCCCCEE
Confidence 33445678999999985 5655544 589999999632110 0122222223468899999999877
Q ss_pred EEEEeCCC-eEEEE
Q psy4510 486 IISTANSG-FNIFR 498 (812)
Q Consensus 486 ~~~~~~~~-~~~~~ 498 (812)
+++...++ +.+|.
T Consensus 321 ~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 321 LVACRDTNVIQIFE 334 (361)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 77765544 55553
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-17 Score=175.60 Aligned_cols=264 Identities=9% Similarity=0.057 Sum_probs=179.8
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccccccC-CCCC-CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCce
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTN-SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~-~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
++|++++.++.|++||+.+++ ....+. ++.. .+..++|+|++++++ ++..++.|.+||+.++ +.+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-------~~~~ 70 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-------ETLG 70 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-------CEEE
T ss_pred cEEEEcCCCCeEEEEECCCCc----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-------CeEe
Confidence 478999999999999998875 233332 2222 488999999998765 4556789999999875 4444
Q ss_pred EEcC-C----CCcEEEEEecCCCCCEEEEEe------------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 267 SFSG-H----LTEGFAMDWSSTEPGVLATGD------------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 267 ~~~~-h----~~~v~~l~~sp~~~~~l~sg~------------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.+.. + ...+.+++|+|++ .+|++++ .++.|.+||+.++. ....+. ....+.+++|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----~~~~~~-~~~~~~~~~~s~ 144 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS----RRKAFE-APRQITMLAWAR 144 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE----EEEEEE-CCSSCCCEEECT
T ss_pred eEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc----EEEEEe-CCCCcceeEECC
Confidence 4442 2 2256789999998 6777775 57999999998765 222333 244678899999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEEEeC-CC-------------------
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVSGGD-DG------------------- 388 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~-dg------------------- 388 (812)
+++. |+++ ++.|++||+.++. ....+...+ ... +.|+|++..++..+. ++
T Consensus 145 dg~~-l~~~--~~~i~~~d~~~~~---~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (337)
T 1pby_B 145 DGSK-LYGL--GRDLHVMDPEAGT---LVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215 (337)
T ss_dssp TSSC-EEEE--SSSEEEEETTTTE---EEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGG
T ss_pred CCCE-EEEe--CCeEEEEECCCCc---EeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeecccccccccccc
Confidence 9996 5555 6899999998543 333332222 122 378898885544433 22
Q ss_pred ----cEEEEecCCCCCCCc-eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 389 ----CIHVWDLRRFKKGSS-VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 389 ----~i~iwd~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
.|.+||+.. ++. ...+..+...+.+++|+|++ .+++++ ++.|.+||+.+.+ .
T Consensus 216 ~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~-----------------~ 272 (337)
T 1pby_B 216 AYRTGLLTMDLET---GEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNA-----------------S 272 (337)
T ss_dssp GEEEEEEEEETTT---CCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTE-----------------E
T ss_pred ccccceEEEeCCC---CCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCc-----------------C
Confidence 468999974 322 33445567788999999997 466666 6899999998763 2
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
.........+..++|+|++..+++++..+.+.+|+....
T Consensus 273 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 273 IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred cceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 222233456889999999876766655455666654443
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-17 Score=173.02 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=101.6
Q ss_pred ccceEEEEEEec-cCCeEEEEeecC----cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC--Cc
Q psy4510 586 HRGCINRVRTCQ-YGSTTLAGVWGE----VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TE 658 (812)
Q Consensus 586 h~~~v~~l~~s~-~g~~l~~~~~~~----dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~--~~ 658 (812)
+...+..++|+| +|++|+.+..+. ...|.++++.... ...+..+. ..
T Consensus 186 ~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--------------------------~~~l~~~~~~~~ 239 (388)
T 3pe7_A 186 ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--------------------------MRKVKTHAEGES 239 (388)
T ss_dssp ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--------------------------CEESCCCCTTEE
T ss_pred CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--------------------------eEEeeeCCCCcc
Confidence 334577888999 998887763211 3367788876553 22233333 35
Q ss_pred eEEEEeCCCCCCeEEecCC-----CceEEEEecCCCceeEEE---------------EecCCCCEEEee---------cC
Q psy4510 659 GFAMDWSSTEPGVLATGDC-----KRNIHIWTPREAGAWSVY---------------LYTNRFGVLATG---------DC 709 (812)
Q Consensus 659 V~~l~~sp~~~~~las~s~-----Dg~v~iWd~~~~~~~~~~---------------~~s~dg~~lasg---------s~ 709 (812)
+..++||| +++.|+..+. +..|.+||+.+++...+. .|+|||+.|+.. ..
T Consensus 240 ~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 240 CTHEFWVP-DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEECT-TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred cccceECC-CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 78899999 6776655333 234999999998753321 488999988754 45
Q ss_pred CCeEEEeecCCCCCcccccccccCCCc-----------ceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 710 KRNIHIWTPREAGAWQVDQKPLVGHTN-----------SVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 710 dg~i~iwd~~~~~~~~~~~~~~~gH~~-----------~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+..|++||+.+++ ...+..|.. .+.+++|||||+++++++..++...||.+.-
T Consensus 319 ~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 319 DPFLYVFNMKNGT-----QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp CCEEEEEETTTTE-----EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CCEEEEEeccCCc-----eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 6799999998865 234555555 5889999999995555666788888887653
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-16 Score=184.17 Aligned_cols=373 Identities=12% Similarity=0.061 Sum_probs=218.7
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC-----eeeeeEcCCCCcEEEeeCC-------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS-----AEDLQWSDLKTALQTVDDP------- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-----V~~l~~s~~~~~l~s~~~d------- 244 (812)
.....++|+| ++.+|+++ ||.|++||+.+++ ....+.+|... ...++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCc----eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 3455799999 99999997 8999999999887 34445666543 2347889999999998876
Q ss_pred --CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 245 --FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 245 --~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
+.+.+||+.++ ....+..|.+.+...+|||+| ..||.+. ++.|++|++.++... ..+..++...+
T Consensus 90 ~~~~~~~~d~~~~--------~~~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~---~lt~~g~~~~~ 156 (740)
T 4a5s_A 90 YTASYDIYDLNKR--------QLITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSY---RITWTGKEDII 156 (740)
T ss_dssp EEEEEEEEETTTT--------EECCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCE---ECCSCCBTTTE
T ss_pred cceEEEEEECCCC--------cEEEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceE---EEcCCCCccce
Confidence 45679999985 223456677889999999999 6777774 689999999877531 11222332222
Q ss_pred -----------------EEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 323 -----------------EDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 323 -----------------~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
..+.|+|+|+. ||.++ .++.+++|++...... ..+...+..+.+.+.|..
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~-------~~~~~~~~~~~yp~~G~~---- 224 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDE-------SLQYPKTVRVPYPKAGAV---- 224 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCST-------TCSSCEEEEEECCBTTSC----
T ss_pred ecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCC-------CCCCCcceeecCCCCcCc----
Confidence 35899999996 55555 4455888886421111 124455677777776642
Q ss_pred eCCCcEEEEecCCCCCCC--ceEEcc------cCCCCEEEEEEccCCCcEEEEEEC----CCCEEEEEcCCCC----chh
Q psy4510 385 GDDGCIHVWDLRRFKKGS--SVATFK------HHTAPVTTVEWHPTESSTFASGGA----DDQIALWDLAVER----DSE 448 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~--~~~~~~------~h~~~v~~v~~~p~~~~~l~s~~~----dg~v~iwd~~~~~----~~~ 448 (812)
.....|++||+.....+. ....+. +|...+..++|+|++. +++.... +..|.+||+.+++ ...
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 112368999997400021 233333 3778899999999974 5554432 2369999998774 100
Q ss_pred HHHhhhhhccCCCceEEeecCCCc-----eeEEEEcCCCCCEE-EEEeCCC-eEEEEe-CCCCCcccEEeecCCCCeeEE
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKE-----IKELHWHPQLPGTI-ISTANSG-FNIFRT-ISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~p~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~i~~~ 520 (812)
...+....+... .....|+|++..++ .....++ ..+|.. .... .......+...+..+
T Consensus 304 ------------~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~--~~~~lT~g~~~v~~~ 369 (740)
T 4a5s_A 304 ------------ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK--DCTFITKGTWEVIGI 369 (740)
T ss_dssp ------------GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS--SCEESCCSSSCEEEE
T ss_pred ------------EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC--ceEecccCCEEEEEE
Confidence 011111222222 33688999998766 4444444 334332 2221 222222334455554
Q ss_pred EEcCCCCCeEEEeeCC-----CceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEE
Q psy4510 521 HWHPQLPGTIISTANS-----GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRT 595 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 595 (812)
.. +++ ..++..+.. ....+..+.+.. .. ....+ ...+.+.......+.|
T Consensus 370 ~~-~d~-~~i~f~~~~~~~~~~~~~ly~v~~~g---~~--~~~~l-------------------t~~~~~~~~~~~~~~~ 423 (740)
T 4a5s_A 370 EA-LTS-DYLYYISNEYKGMPGGRNLYKIQLID---YT--KVTCL-------------------SCELNPERCQYYSVSF 423 (740)
T ss_dssp EE-ECS-SEEEEEESCGGGCTTCBEEEEEETTE---EE--EEEES-------------------STTTSTTTBCBEEEEE
T ss_pred EE-EeC-CEEEEEEecCCCCCceeEEEEEECCC---CC--cceee-------------------ccccCCCCCceEEEEE
Confidence 32 332 344443332 112222222211 00 00000 0000112346778999
Q ss_pred eccCCeEEEEeec-CcceEEEEeccccc
Q psy4510 596 CQYGSTTLAGVWG-EVGKVGIWDLKTAL 622 (812)
Q Consensus 596 s~~g~~l~~~~~~-~dg~I~iwd~~~~~ 622 (812)
||++++++..+.+ .-..+.+++..+++
T Consensus 424 S~dg~~~~~~~s~~~~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 424 SKEAKYYQLRCSGPGLPLYTLHSSVNDK 451 (740)
T ss_dssp CTTSSEEEEEECSBSSCEEEEEETTTTE
T ss_pred CCCCCEEEEEeCCCCCCEEEEEECCCCc
Confidence 9999987766422 12367788876543
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-17 Score=171.14 Aligned_cols=156 Identities=10% Similarity=0.024 Sum_probs=110.8
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC-CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
++++++++ .++++++.++.|++||+.++. ....+..+. ..+..++|+|+++.+++++..++.|.+||+.++.
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~-- 76 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDT----VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-- 76 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTE----EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCc----EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--
Confidence 35677776 789999999999999998875 233333222 2578999999998767777789999999998532
Q ss_pred cceeecCCcC-----CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 356 SCMLTLPNAH-----TSDVNVISWNRTEPLIVSGGDD------------GCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 356 ~~~~~~~~~~-----~~~v~~l~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
.+..+...+ ...+..++|+|+|++|++++.+ +.|.+||+...+....+..+.. ...+.+++
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 77 -NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp -EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEE
T ss_pred -EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCccccee
Confidence 333332222 2347889999999988888865 8999999975322333444443 34688999
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|+|++. +++ ++ +.|.+||+.+.+
T Consensus 155 ~s~dg~-l~~-~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 155 AADDGS-LYV-AG--PDIYKMDVKTGK 177 (349)
T ss_dssp ECTTSC-EEE-ES--SSEEEECTTTCC
T ss_pred ECCCCc-EEE-cc--CcEEEEeCCCCc
Confidence 999985 444 43 449999998764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=171.26 Aligned_cols=285 Identities=9% Similarity=-0.012 Sum_probs=182.5
Q ss_pred cCCCCCceEE-----EEeCCCCCCeEEEecC-CCc--EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 172 FSGHLTEGFA-----MDWSSTEPGVLATGDC-KRN--IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 172 ~~gh~~~i~~-----~~~sp~~~~~lat~~~-dg~--v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
++.|...... .+||| +|+.||.++. +|. |.+||+.+++ ......++...+..++|+|+++.|+.++.
T Consensus 26 lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQV----ATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCE----EEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred ecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCc----eEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 3344444444 78999 9999988876 664 7888887765 44555667777778899999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEE--ecCCCCCEEEEE----------------------eCCCcEEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD--WSSTEPGVLATG----------------------DCKRNIHI 299 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~sp~~~~~l~sg----------------------~~dg~i~v 299 (812)
++.|++||+.++ +....+..+...+.... ++|++ .+++.. +.+..|.+
T Consensus 101 ~~~l~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 101 GRNLMRVDLATL-------EENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp TTEEEEEETTTC-------CEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CCeEEEEECCCC-------cceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 999999999986 44444455555554444 48888 565532 23468999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcC-CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCC-CCeEE
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHT-SDVNV 371 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~ 371 (812)
||+.++. ...+..+...+..++|+| +++. |+.++.+ ..|.++|+.... ...+...+. ..+..
T Consensus 173 ~d~~~g~-----~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 173 VDLKTGE-----STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTN----MRKVKTHAEGESCTH 242 (388)
T ss_dssp EETTTCC-----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCC----CEESCCCCTTEEEEE
T ss_pred EECCCCc-----eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCc----eEEeeeCCCCccccc
Confidence 9998875 334445667899999999 9985 5555543 377888876322 233322222 35788
Q ss_pred EEEcCCCCEEEEEe-CCC----cEEEEecCCCCCCCceEEcccCCCC---EEEEEEccCCCcEEEEE--------ECCCC
Q psy4510 372 ISWNRTEPLIVSGG-DDG----CIHVWDLRRFKKGSSVATFKHHTAP---VTTVEWHPTESSTFASG--------GADDQ 435 (812)
Q Consensus 372 l~~~~~~~~l~sg~-~dg----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~v~~~p~~~~~l~s~--------~~dg~ 435 (812)
++|+|+|+.|+..+ .++ .|.+||+...+ ...+..+.++... ...+.|+|++..++++. ..+..
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLE-NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCC-EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCc-eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 99999999554433 222 39999997421 1123333321000 11236999986444433 44668
Q ss_pred EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-----------ceeEEEEcCCCCCEEEEEeCCC-eEEE
Q psy4510 436 IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-----------EIKELHWHPQLPGTIISTANSG-FNIF 497 (812)
Q Consensus 436 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~p~~~~~~~~~~~~~-~~~~ 497 (812)
|.+||+...+ +.....+.. .+..++|+|++..+++++..++ ..+|
T Consensus 322 i~~~d~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 322 LYVFNMKNGT-----------------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp EEEEETTTTE-----------------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred EEEEeccCCc-----------------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 9999998763 222222222 4778899999877776665444 3444
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-16 Score=168.48 Aligned_cols=251 Identities=10% Similarity=-0.036 Sum_probs=165.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccC-CCCcccccccccCCCCCCeeeeeEcCCCCc--EEEee-----------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-EAGAWQVDQKPLGGHTNSAEDLQWSDLKTA--LQTVD----------- 242 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~-~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~--l~s~~----------- 242 (812)
..+..++|+| ++++|++++.+ .|.+|++. +++... ......+ +.+.+++|+|+|++ +++++
T Consensus 40 ~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~--~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 40 EPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVH--EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEE--EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEE--eeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 4567799999 99999998887 99999987 443211 1111111 23667999999994 55553
Q ss_pred --CCCceEEeeCCCCCCCCCCCCCceEEc----CCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCC-CCCcceecccc
Q psy4510 243 --DPFQLAEHNKKRGKGPGIPTPPLFSFS----GHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPR-EAGAWQVDQKP 314 (812)
Q Consensus 243 --~d~~i~vwd~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~-~~~~~~~~~~~ 314 (812)
.++.+.+|++... .+....+. .+...+.+++|+|++ .+|++++ .++.|++|++. ++... ....
T Consensus 115 ~~~~g~v~v~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~--~~~~ 185 (365)
T 1jof_A 115 YKFAGYGNVFSVSET------GKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVE--LVGS 185 (365)
T ss_dssp SSSCCEEEEEEECTT------CCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEE--EEEE
T ss_pred ecCCceEEEEccCCC------CcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEE--Eeee
Confidence 6889999999742 12222222 255679999999999 6666655 46799999998 55421 1112
Q ss_pred cc--CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC--CCcc---cceeecCC---cCCC------CeEEEE-EcCC
Q psy4510 315 LV--GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV--INTK---SCMLTLPN---AHTS------DVNVIS-WNRT 377 (812)
Q Consensus 315 ~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~---~~~~~~~~---~~~~------~v~~l~-~~~~ 377 (812)
+. .|...+..++|+|+++.++++...++.|.+|++.. +... ..+..++. +|.. .+..++ |+|+
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd 265 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS 265 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCC
Confidence 22 24567999999999996444444578999998753 2110 01122211 1222 488999 9999
Q ss_pred CCEEEEEeCC-C-----cEEEEecCCCCCCCceE---EcccCCCCEEEEEEcc---CCCcEEEEEEC-CCCEEEEEcCCC
Q psy4510 378 EPLIVSGGDD-G-----CIHVWDLRRFKKGSSVA---TFKHHTAPVTTVEWHP---TESSTFASGGA-DDQIALWDLAVE 444 (812)
Q Consensus 378 ~~~l~sg~~d-g-----~i~iwd~~~~~~~~~~~---~~~~h~~~v~~v~~~p---~~~~~l~s~~~-dg~v~iwd~~~~ 444 (812)
|++|+++..+ . .|.+|++.. .++... ....+...+..++|+| ++ ++|++++. ++.|.+|++...
T Consensus 266 G~~l~v~~~~~~~~~~~~i~v~~~~~--~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 266 GKYMFASSRANKFELQGYIAGFKLRD--CGSIEKQLFLSPTPTSGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSEEEEEEEESSTTSCCEEEEEEECT--TSCEEEEEEEEECSSCCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEECCCCCCCCCCeEEEEEECC--CCCEEEeeeeeecCCCCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEchh
Confidence 9987766543 2 899999963 233322 2333455567889999 66 57777776 489999998654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.9e-16 Score=161.72 Aligned_cols=234 Identities=10% Similarity=-0.010 Sum_probs=160.2
Q ss_pred eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
.++++++++++++++.++.|.+||..++ +.+..+..+. ..+..++|+|++..+++++..++.|.+||+.++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 4567788999999999999999999875 5555665443 2577999999994355666778999999998775
Q ss_pred cceecccccc-CC-----CCCEEEEEEcCCCCeEEEEEECC------------CeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 307 AWQVDQKPLV-GH-----TNSVEDLQWSPGEKRVLASCSVD------------LSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 307 ~~~~~~~~~~-~h-----~~~v~~~~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
. ...+. .+ ...+.+++|+|+++. |++++.+ +.|.+||+.++.....+... .+...
T Consensus 77 ~----~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~ 149 (349)
T 1jmx_B 77 N----TFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQ 149 (349)
T ss_dssp E----EEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSS
T ss_pred E----EEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCc
Confidence 2 22222 12 234789999999995 5665544 89999999854323323332 23346
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC--------------------------------------
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------------------------------------- 410 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------------------------------------- 410 (812)
+.+++|+|+++ +++++. .|.+||+.. ++.+..+..+
T Consensus 150 ~~~~~~s~dg~-l~~~~~--~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 150 VYLMRAADDGS-LYVAGP--DIYKMDVKT---GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp CCCEEECTTSC-EEEESS--SEEEECTTT---CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred ccceeECCCCc-EEEccC--cEEEEeCCC---CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 88999999999 555543 499999874 3333333222
Q ss_pred ------------------------------CCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 411 ------------------------------TAPVTTVEWHP-TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 411 ------------------------------~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
...+.+++|+| ++ .+++++ ++.|.+||+.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~-------------- 286 (349)
T 1jmx_B 224 QDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRK-------------- 286 (349)
T ss_dssp ---CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTE--------------
T ss_pred CCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCe--------------
Confidence 12456778889 86 466666 7899999998763
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
..........+..++|+|++..++++...+.+.+|+...
T Consensus 287 ---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 287 ---LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ---EEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ---EEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 322222334578999999988777755454566665433
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-15 Score=175.62 Aligned_cols=210 Identities=9% Similarity=-0.024 Sum_probs=142.7
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEe--eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE---------EEEec--CC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF---------AMDWS--ST 283 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~s--p~ 283 (812)
..+.+|...|..++|++++-++++. +.++...||....+ .....+..|...+. ...|+ |+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSS
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-------CCcceeCCCCccccccccccCCccceeeeecC
Confidence 4567899999999999887666766 56788999986432 34556666665555 56665 99
Q ss_pred CCCEEEEEe-CCCcEEEEeCC--C-CCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEECC----------CeE
Q psy4510 284 EPGVLATGD-CKRNIHIWTPR--E-AGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCSVD----------LSI 344 (812)
Q Consensus 284 ~~~~l~sg~-~dg~i~vwd~~--~-~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~d----------g~i 344 (812)
+..+|+.++ .+..|.++++. . +. ...+.. |...+.+++|+|+|+. |++++.+ ..|
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~-----~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAV-----PRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCC-----CEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCC-----CEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEE
Confidence 944155443 46677777765 2 32 233444 6678899999999995 6666665 589
Q ss_pred EEEECCCCC--cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEecCCCCCC---CceEEcccCC
Q psy4510 345 RIWDTRVIN--TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--------GCIHVWDLRRFKKG---SSVATFKHHT 411 (812)
Q Consensus 345 ~iwd~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--------g~i~iwd~~~~~~~---~~~~~~~~h~ 411 (812)
++||+.... .......+...+...+..++|+|+|++|+.++.+ ..|++||+.. .+ ........|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~--~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 164 AAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE--DGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT--TSCEEEEEEEEEETT
T ss_pred EEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC--CCcccccEEeCCCCC
Confidence 999997510 0012233321445678889999999988877754 3799999972 12 3333344567
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..+..+.|+|++. ++++++.++..+||.+.
T Consensus 242 ~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 242 EAIAQAEWAPDGS-LIVATDRTGWWNLHRVD 271 (662)
T ss_dssp BCEEEEEECTTSC-EEEEECTTSSCEEEEEC
T ss_pred ceEcceEECCCCe-EEEEECCCCCeEEEEEE
Confidence 8899999999985 88888888855555443
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.9e-16 Score=165.31 Aligned_cols=293 Identities=11% Similarity=0.074 Sum_probs=172.4
Q ss_pred CEEEEEEcCCCCeEEEEEECC--CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVD--LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
.+.+++|+|+|+.++++...+ ..|.+||+..+. ...+...+......+.|+|+|+.|+.++.++.|++||+..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~- 111 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ----AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET- 111 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE----EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc----EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-
Confidence 377889999999644444443 368888987432 2233233333333478999999999999999999999973
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHW 478 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 478 (812)
+........+.. |+|++ ..|+..+.+....+|.. .+.|
T Consensus 112 --~~~~~~~~~~~~------~~~~g-~~l~~~~~~~~~~~~~~---------------------------------~~~~ 149 (396)
T 3c5m_A 112 --LEEQVIYTVDEE------WKGYG-TWVANSDCTKLVGIEIL---------------------------------KRDW 149 (396)
T ss_dssp --CCEEEEEECCTT------EEEEE-EEEECTTSSEEEEEEEE---------------------------------GGGC
T ss_pred --CCcEEEEecccc------cCCCC-CEEEeccCCcccccccc---------------------------------cccc
Confidence 443333333333 66665 45665555544444431 0123
Q ss_pred cCCCCCEEEEEe---CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 479 HPQLPGTIISTA---NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 479 ~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
+|++..+++... .....+| .+... .+
T Consensus 150 spdg~~~~~~~~~~~~~~~~l~---------------------------------------------~~d~~---~g--- 178 (396)
T 3c5m_A 150 QPLTSWEKFAEFYHTNPTCRLI---------------------------------------------KVDIE---TG--- 178 (396)
T ss_dssp CCCCSHHHHHHHHHTCCCEEEE---------------------------------------------EEETT---TC---
T ss_pred CCCCcceeeeeeccCCCcceEE---------------------------------------------EEECC---CC---
Confidence 344322221110 0010110 00000 00
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEec-cCCeEEEEeecCc----ceEEEEeccccccccCCccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ-YGSTTLAGVWGEV----GKVGIWDLKTALQTVDDPFQ 630 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~g~~l~~~~~~~d----g~I~iwd~~~~~~~~~~~~~ 630 (812)
. ...+..+...+..++|+| +++.++..+.+.. ..|.+|++..+.
T Consensus 179 ----------------------~-~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-------- 227 (396)
T 3c5m_A 179 ----------------------E-LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-------- 227 (396)
T ss_dssp ----------------------C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--------
T ss_pred ----------------------c-EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--------
Confidence 0 011122344677889999 7887776632222 468888886553
Q ss_pred ccccccccCCCCCCCCCCeeeecCC--CCceEEEEeCCCCCCeEEecCCC-----ceEEEEecCCCceeEE-------EE
Q psy4510 631 LAEHNKKRGKGPGIPTPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWSV-------YL 696 (812)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~gh--~~~V~~l~~sp~~~~~las~s~D-----g~v~iWd~~~~~~~~~-------~~ 696 (812)
...+..+ ...+..++|+| +++.|+.++.+ +.|.+||+.+++...+ ..
T Consensus 228 ------------------~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 288 (396)
T 3c5m_A 228 ------------------VRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHL 288 (396)
T ss_dssp ------------------CEESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEE
T ss_pred ------------------eeEeeccCCCccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCC
Confidence 1122222 23688899999 77777666543 5599999988754332 46
Q ss_pred ecC-CCCEEEeec----------------CCCeEEEeecCCCCCcccccccccCCCc-----------ceeEeEEecCCc
Q psy4510 697 YTN-RFGVLATGD----------------CKRNIHIWTPREAGAWQVDQKPLVGHTN-----------SVEDLQWSPGEK 748 (812)
Q Consensus 697 ~s~-dg~~lasgs----------------~dg~i~iwd~~~~~~~~~~~~~~~gH~~-----------~V~~l~fs~dg~ 748 (812)
++| ||++|++++ .++.|++||+.+++. ..+..|.. .+..++|+|||+
T Consensus 289 ~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 289 MSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-----QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp EECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-----CEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred ccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-----EEccCCCCccccccccccCCCCCceEccCCC
Confidence 788 999888754 347899999987752 34555544 267789999999
Q ss_pred eeEEeeccCCceEEeeec
Q psy4510 749 RVLASCSVDRSNRIGARR 766 (812)
Q Consensus 749 ~~L~s~s~Dg~i~iWd~~ 766 (812)
++++++..++...||.+.
T Consensus 364 ~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEEEECTTSSCEEEEEE
T ss_pred eEEEEecCCCCceEEEEE
Confidence 544444556777777654
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-14 Score=150.25 Aligned_cols=244 Identities=12% Similarity=0.108 Sum_probs=180.7
Q ss_pred CCceEEEEeCCCCCCeEEEecCC------------------------CcEEEEccCCCCccccccccc-CCCCCCeeeee
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCK------------------------RNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQ 230 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~d------------------------g~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~ 230 (812)
.+.+.+++++| +|+++++...+ ++|.+||..+++. ...+ .++-.....++
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI----LQSSGKNLFYLPHGLS 97 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE----EEEECTTTCSSEEEEE
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE----EeccCCCccCCceEEE
Confidence 36799999999 99999988777 4799999887763 2222 24556789999
Q ss_pred EcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE---------cCCCCcEEEEEecC-CCCCEEEEEe-CCCcEEE
Q psy4510 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF---------SGHLTEGFAMDWSS-TEPGVLATGD-CKRNIHI 299 (812)
Q Consensus 231 ~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~sp-~~~~~l~sg~-~dg~i~v 299 (812)
++++|+.+++...++.|++|+.... ...+..+ .++......|+++| ++ .++++.+ .++.|++
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~------~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSK------EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQ 170 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCS------SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCC------eEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEE
Confidence 9999998888888999999998652 2255555 34555789999999 55 6777775 6899999
Q ss_pred EeCCCCCcceecccccc----------CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLV----------GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSD 368 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~ 368 (812)
|+.. +. ....+. ++......++++|++..++++...++.|++|+..++. .+..+. ..+...
T Consensus 171 ~~~~-g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~---~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 171 FSPS-GK----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE---FVREIKHASFGRN 242 (329)
T ss_dssp ECTT-SC----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEEEECCTTTTTC
T ss_pred EcCC-CC----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc---EEEEEeccccCCC
Confidence 9943 33 122221 2234589999999955588888899999999997432 333331 345677
Q ss_pred eEEEEEcCCCCEEEEE-------eCCCcEEEEecCCCCCCCceEEc---ccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 369 VNVISWNRTEPLIVSG-------GDDGCIHVWDLRRFKKGSSVATF---KHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg-------~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+..++|+| +..+++. ..+..|++||+. .++.+..+ ..+...+.+|+++|++ .++++...+++|++
T Consensus 243 ~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~---~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 243 VFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFS---SGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWK 317 (329)
T ss_dssp EEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETT---TCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEE
T ss_pred cceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcC---CCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEE
Confidence 88999999 4333333 334589999987 46677776 3567789999999998 78888888999999
Q ss_pred EEcCCC
Q psy4510 439 WDLAVE 444 (812)
Q Consensus 439 wd~~~~ 444 (812)
|++...
T Consensus 318 ~~~~~~ 323 (329)
T 3fvz_A 318 FTLTEK 323 (329)
T ss_dssp EEEEEC
T ss_pred EeCCcc
Confidence 998654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1e-14 Score=168.09 Aligned_cols=246 Identities=10% Similarity=-0.035 Sum_probs=170.3
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEe--cCCCcEEEEccCCCCcccccccccCCCCCCee---------eeeEc--CCCCc
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE---------DLQWS--DLKTA 237 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~--~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~---------~l~~s--~~~~~ 237 (812)
.+.+|...+..++|++ ++-++++. +.++...||....+. ..+.+..|...+. ..+|+ |||++
T Consensus 18 ~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 18 LVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADG----AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTS----CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCC----CcceeCCCCccccccccccCCccceeeeecCCCe
Confidence 3457888999999999 87777777 668899999864443 3445666666666 66666 99999
Q ss_pred -EEEeeC-CCceEEeeCC--C-CCCCCCCCCCceEEcC-----CCCcEEEEEecCCCCCEEEEEeCC----------CcE
Q psy4510 238 -LQTVDD-PFQLAEHNKK--R-GKGPGIPTPPLFSFSG-----HLTEGFAMDWSSTEPGVLATGDCK----------RNI 297 (812)
Q Consensus 238 -l~s~~~-d~~i~vwd~~--~-~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~~~~~l~sg~~d----------g~i 297 (812)
|+.++. +..|.++++. . + ....+.. |...+.+++|+|+| ..|++++.+ ..|
T Consensus 93 ~la~~~~~~~~l~~~~~~~~g~~--------~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 93 LLVFTHFGDQRLYAFEPDAPGGA--------VPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp EEEEEBTTTCCEEEECTTSTTCC--------CCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEE
T ss_pred EEEEEECCCCeEEEEcCCCCCCC--------CCEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEE
Confidence 776654 4556666655 2 2 2334444 66788999999999 677777766 589
Q ss_pred EEEeCCC------CCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECC-CCCcccceeec
Q psy4510 298 HIWTPRE------AGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTR-VINTKSCMLTL 361 (812)
Q Consensus 298 ~vwd~~~------~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~ 361 (812)
++|++.+ +. ...+. .+...+..++|+|+|+. |+.++.+ ..|++||+. ++.. .....+
T Consensus 164 ~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~-~~~~~l 236 (662)
T 3azo_A 164 AAVPLDGSAAADRSA-----VRELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRF-ADTRTL 236 (662)
T ss_dssp EEEETTSTTTTCGGG-----SEESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCE-EEEEEE
T ss_pred EEEECCCCccccCCc-----eeEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcc-cccEEe
Confidence 9999987 33 33444 55678889999999995 6655544 479999997 3311 123333
Q ss_pred CCcCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEecCCCCCCCceEEcccCCCC--------EEEEEEccCCCcEEEEEE
Q psy4510 362 PNAHTSDVNVISWNRTEPLIVSGGDDG--CIHVWDLRRFKKGSSVATFKHHTAP--------VTTVEWHPTESSTFASGG 431 (812)
Q Consensus 362 ~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~--------v~~v~~~p~~~~~l~s~~ 431 (812)
...|...+..++|+|+|++++++..++ .|.+||+. .++.......+... +.+++|+|++ .++++++
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~ 312 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA---TGAATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHG 312 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT---TCCEEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEB
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC---CCceeecccccccccCccccccCceEeEeCCC-EEEEEEE
Confidence 345678899999999999888888888 55555653 23332222222221 4678888886 6888888
Q ss_pred CCCCEEEEEcC
Q psy4510 432 ADDQIALWDLA 442 (812)
Q Consensus 432 ~dg~v~iwd~~ 442 (812)
. +.++||.+.
T Consensus 313 ~-~~~~l~~~d 322 (662)
T 3azo_A 313 K-GAAVLGILD 322 (662)
T ss_dssp S-SSCEEEEEE
T ss_pred c-CccEEEEEE
Confidence 8 999999543
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.67 E-value=5.9e-14 Score=143.11 Aligned_cols=244 Identities=8% Similarity=0.072 Sum_probs=175.6
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc--cccCCCCCCeeeeeE-cCCCCcEEEeeC-CCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ--KPLGGHTNSAEDLQW-SDLKTALQTVDD-PFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~--~~l~~h~~~V~~l~~-s~~~~~l~s~~~-d~~i~v 249 (812)
++...+.+++++| +++++++...++.|++|+..... ..... ....+|...+.++++ .++++.+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~-~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRF-KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCE-EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcE-EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 5667899999999 99999998889999999987321 11000 011245567899999 467766666543 789999
Q ss_pred eeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc--cCCCCCEEEEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQ 326 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~ 326 (812)
|+... +.+..+. .+...+.+++++|++ .++++...++.|.+|+..... ...+ .++...+..++
T Consensus 105 ~d~~g--------~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 105 YNQYG--------QFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNV-----LHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECTTS--------CEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE-----EEEEECTTTCSSEEEEE
T ss_pred ECCCC--------cEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCCE-----EEEeCCCCccCCcEEEE
Confidence 99433 4444443 344678999999998 677877778999999965321 2222 24456789999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCCCCce
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFKKGSSV 404 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~ 404 (812)
++|++. ++++.+.++.|++||... ..+..+. .++...+..++++++|+++++...++ .|.+||.. ++.+
T Consensus 171 ~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~----g~~~ 241 (286)
T 1q7f_A 171 VNDKQE-IFISDNRAHCVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD----GQLI 241 (286)
T ss_dssp ECSSSE-EEEEEGGGTEEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT----SCEE
T ss_pred ECCCCC-EEEEECCCCEEEEEcCCC----CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC----CCEE
Confidence 999987 788878899999999752 2233331 12236789999999999888887776 99999963 5566
Q ss_pred EEcccCCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 405 ATFKHHTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 405 ~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+..+.. .+.+++++|++ +++++ +.+++|++|++...
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCC
T ss_pred EEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEcccc
Confidence 66655433 47899999987 56666 67999999998654
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-14 Score=152.18 Aligned_cols=284 Identities=8% Similarity=-0.021 Sum_probs=169.9
Q ss_pred eEEEecCC--CcEEEEccCCCCccccccccc-CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC-CCCCCCCCCCCce
Q psy4510 191 VLATGDCK--RNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK-RGKGPGIPTPPLF 266 (812)
Q Consensus 191 ~lat~~~d--g~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~ 266 (812)
.|++|+.. +.|.+|+++............ ......+..++|+|++++|++++.+ .|.+|++. ++ +...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-------~~~~ 75 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-------EIVH 75 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-------EEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-------CEEE
Confidence 34555442 468887764322111111111 1344578899999999999998887 99999987 53 2222
Q ss_pred EE--cCCCCcEEEEEecCCCCC-EEEEEe-------------CCCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcC
Q psy4510 267 SF--SGHLTEGFAMDWSSTEPG-VLATGD-------------CKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSP 329 (812)
Q Consensus 267 ~~--~~h~~~v~~l~~sp~~~~-~l~sg~-------------~dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p 329 (812)
.. ..+ +...+++|+|++.. ++++++ .+|.+.+|++...+........+ ..+...+.+++|+|
T Consensus 76 ~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 76 EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT
T ss_pred eeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC
Confidence 21 111 23556899999832 345553 68999999997533211111111 12456799999999
Q ss_pred CCCeEEEEEECCCeEEEEECC-CCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCc---
Q psy4510 330 GEKRVLASCSVDLSIRIWDTR-VINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSS--- 403 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~--- 403 (812)
+|+.++++...++.|++|++. ++.. ..+..+. ..|...+..++|+|+|+++++++. ++.|.+|++... .++.
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~ 232 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYT 232 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEc
Confidence 999644444357899999997 3321 1122221 124567999999999998877764 789999987531 2222
Q ss_pred ---eEEcc----cCCC------CEEEEE-EccCCCcEEEEEEC-CC-----CEEEEEcCC-CCchhHHHhhhhhccCCCc
Q psy4510 404 ---VATFK----HHTA------PVTTVE-WHPTESSTFASGGA-DD-----QIALWDLAV-ERDSEIEQREAELKDLPSQ 462 (812)
Q Consensus 404 ---~~~~~----~h~~------~v~~v~-~~p~~~~~l~s~~~-dg-----~v~iwd~~~-~~~~~~~~~~~~~~~~~~~ 462 (812)
+..+. +|.. .+..++ |+|++. +|+++.. ++ +|.+|++.. ++.. .
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~g~~~--------------~ 297 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDCGSIE--------------K 297 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTTSCEE--------------E
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCCCCEE--------------E
Confidence 11222 1222 488999 999985 5555543 23 799999963 3110 1
Q ss_pred eE-EeecCCCceeEEEEcC---CCCCEEEEEeC-CCeEEEEeC
Q psy4510 463 LL-FIHLGQKEIKELHWHP---QLPGTIISTAN-SGFNIFRTI 500 (812)
Q Consensus 463 ~~-~~~~~~~~v~~~~~~p---~~~~~~~~~~~-~~~~~~~~~ 500 (812)
+. ........+..++|+| ++..++++... +.+.+|...
T Consensus 298 ~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 298 QLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred eeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 11 1212233567789999 67665555544 345666543
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-15 Score=161.21 Aligned_cols=275 Identities=10% Similarity=0.028 Sum_probs=170.4
Q ss_pred eEEEEeCCCCCCeEEEecC---CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~---dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+..++||| +|++||.... +..|.+|++.+++ ......++......+.|+|+|++|+.++.++.|.+|++.++
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQ----AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTE----EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCc----EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 56689999 9998876643 2468888887764 22222333333445889999999999999999999999875
Q ss_pred CCCCCCCCCceEEcCCCCcEEE-------------------EEecCCCCCEEEEE-----eCCCcEEEEeCCCCCcceec
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFA-------------------MDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~-------------------l~~sp~~~~~l~sg-----~~dg~i~vwd~~~~~~~~~~ 311 (812)
+.......+...... +.|+|++ ..++.+ ..+..|++||+.++..
T Consensus 113 -------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~~~d~~~g~~---- 180 (396)
T 3c5m_A 113 -------EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLIKVDIETGEL---- 180 (396)
T ss_dssp -------CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEEEEETTTCCE----
T ss_pred -------CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEEEEECCCCcE----
Confidence 333333333332222 3567777 444433 4567899999987652
Q ss_pred cccccCCCCCEEEEEEcC-CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEE
Q psy4510 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~s 383 (812)
..+..+...+..+.|+| ++.. |+.++.+ ..|.+||+.... ...+.... ...+..++|+|+|+.|+.
T Consensus 181 -~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 181 -EVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSN----VRKIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp -EEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCC----CEESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred -EeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCc----eeEeeccCCCccccceEECCCCCEEEE
Confidence 22334667899999999 6774 5544443 368888876322 22231211 235788999999996666
Q ss_pred EeCC-----CcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEE----------------CCCCEEEEEc
Q psy4510 384 GGDD-----GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGG----------------ADDQIALWDL 441 (812)
Q Consensus 384 g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~----------------~dg~v~iwd~ 441 (812)
++.+ +.|++||+.. ++... +.... ... +.|+| ++. ++++++ .+..|.+||+
T Consensus 255 ~~~~~~~~~~~l~~~d~~~---g~~~~-l~~~~-~~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPET---LENEE-VMVMP-PCS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEETTTCCEEEEEECTTT---CCEEE-EEECC-SEE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEEET
T ss_pred EecCCCCccceEEEEECCC---CCeEE-eeeCC-CCC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 6443 4499999973 32222 22111 233 89999 875 666654 2467999998
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCC---------CceeEEEEcCCCCCEEEEEeCCC-eEEEE
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQ---------KEIKELHWHPQLPGTIISTANSG-FNIFR 498 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~~~~~~~~~-~~~~~ 498 (812)
..... ..+..+... ..+..+.|+|++..++++...++ ..+|.
T Consensus 328 ~~~~~---------------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 328 KAKSA---------------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp TTTBC---------------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccCce---------------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 77632 122222110 02566789999876666654433 34443
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-14 Score=150.95 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=96.6
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCC
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
.|+.|.+||..+++ ....+..+..+ .++|+|+++.+.++.. .++.|.+||+.+.. .+..+..
T Consensus 29 ~d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~---~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT---FEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC---EEEEEEE
T ss_pred ccCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc---EEEEEEc
Confidence 36899999998876 33444444444 8999999996444432 36789999998543 3333311
Q ss_pred c-----CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 364 A-----HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 364 ~-----~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
. +......++++|+|++|+++.. ++.|.+||+. ..+.+.. +.. . ....+.+.|.+...+++.+.||.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~---~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA---KGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT---TTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSS
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC---CCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCc
Confidence 1 2345678999999998888763 6899999998 4556666 543 2 23446778887678899999999
Q ss_pred EEEEEcCC
Q psy4510 436 IALWDLAV 443 (812)
Q Consensus 436 v~iwd~~~ 443 (812)
+.+|++..
T Consensus 175 ~~~v~~~~ 182 (361)
T 2oiz_A 175 LLTINLGE 182 (361)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 99999865
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.58 E-value=2.2e-13 Score=142.33 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=180.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..|.+++|+| ++..++..+.++.++.|. .. ....+..+...+.+++|++++++++++..++.|.+|+..++
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~- 76 (333)
T 2dg1_A 6 QDLPTLFYSG-KSNSAVPIISESELQTIT---AE----PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK- 76 (333)
T ss_dssp CCCCBCCSCG-GGGCSSCCCCGGGSCEEE---CE----EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC-
T ss_pred cccceeeecC-CccceeEEeecccCcccc---cc----eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC-
Confidence 3466788999 877777777788999992 11 33455667777899999999997778888899999998874
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+.......+...+.+++|+|++ .+++++..+ +.|.+||..++...... ....+...+.+++++|++.
T Consensus 77 ------~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 77 ------EIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDII--EDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp ------CEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEE--CSSSSCCCEEEEEECTTSC
T ss_pred ------cEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEE--ccCccCCcccceEECCCCC
Confidence 3222233566789999999998 677776665 68999998876521110 1112456799999999997
Q ss_pred eEEEEEEC------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceE
Q psy4510 333 RVLASCSV------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 333 ~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
++++... .+.|..+|..... +..+ ..+...++.++|+|+++.| ++.+.++.|.+||+.. .+..+.
T Consensus 148 -l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~--~g~~~~ 219 (333)
T 2dg1_A 148 -FYFTDFRGYSTNPLGGVYYVSPDFRT----VTPI-IQNISVANGIALSTDEKVLWVTETTANRLHRIALED--DGVTIQ 219 (333)
T ss_dssp -EEEEECCCBTTBCCEEEEEECTTSCC----EEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT--TSSSEE
T ss_pred -EEEEeccccccCCCceEEEEeCCCCE----EEEe-ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC--CCcCcc
Confidence 5665543 2456666654221 2222 1223457899999999854 5555678999999963 122221
Q ss_pred --------EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC------
Q psy4510 406 --------TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK------ 471 (812)
Q Consensus 406 --------~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 471 (812)
.+.++ ..+..+++++++ +++++...++.|.+||.... .+........
T Consensus 220 ~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~g~-----------------~~~~~~~~~~~~g~~~ 280 (333)
T 2dg1_A 220 PFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKRGY-----------------PIGQILIPGRDEGHML 280 (333)
T ss_dssp EEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTTSC-----------------EEEEEECTTGGGTCSC
T ss_pred cccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCCCC-----------------EEEEEEcCCCcccccc
Confidence 12222 467889999987 57777777789999998432 1111111111
Q ss_pred ceeEEEEcCCCCCEEEEEeCC
Q psy4510 472 EIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~ 492 (812)
.+..++|+|++..+++++..+
T Consensus 281 ~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 281 RSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp BCCEEEECTTSCEEEEEEECG
T ss_pred CcceEEECCCCCEEEEEeCcc
Confidence 578999998865566665543
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2.1e-13 Score=158.06 Aligned_cols=252 Identities=12% Similarity=0.019 Sum_probs=171.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCC-----cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg-----~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++||.+..++ .|++||+.+++... ..+. ...+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~---~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 122 DGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELP---DVLE--RVKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp TSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEE---EEEE--EECSCCEEECTTSSEEEEEECCCCSS
T ss_pred CCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCc---cccc--CcccceEEEEeCCCEEEEEEECCccc
Confidence 4555788999999 999998764433 89999999876321 1121 223778999999999999887665
Q ss_pred --------------eEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeC-----CCcEEEEeCCC-
Q psy4510 247 --------------LAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDC-----KRNIHIWTPRE- 304 (812)
Q Consensus 247 --------------i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~-----dg~i~vwd~~~- 304 (812)
|++|++.++ .......+. .|...+..+.|+|++ .+|+.++. +..|++||+.+
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~-----~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTD-----QSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSC-----GGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred cccccccccCCCCEEEEEECCCC-----cccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECccc
Confidence 999999775 111122233 355668899999999 56655543 56899999976
Q ss_pred -----CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccceeecCCcCC-CCeEEEEEc
Q psy4510 305 -----AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSCMLTLPNAHT-SDVNVISWN 375 (812)
Q Consensus 305 -----~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~ 375 (812)
+.. ....+..+...+.. .|+|+++.+++.+..+ +.|.+||+...... ....+...+. ..+..++|+
T Consensus 270 ~~~~~~~~---~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 270 SNGITGIL---KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-KWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp SSSSCSSC---CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEECCCSSCEEEEEEEE
T ss_pred ccccCCcc---ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cceeccCCCCCCeEEEEEEE
Confidence 321 13344555555554 4889998755555443 37999999754211 1223312222 368889999
Q ss_pred CCCCEEEEEeCCCc--EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCCC
Q psy4510 376 RTEPLIVSGGDDGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVER 445 (812)
Q Consensus 376 ~~~~~l~sg~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~~ 445 (812)
+++.++++...++. |.+|++. .+..+..+..+.+.|..+.++|++..++++.+. .++|.+||+.+++
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~---~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLA---TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETT---TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred cCCEEEEEEEECCEEEEEEEECC---CCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 77778888888885 5556664 355667777777889999999987555555443 4689999998764
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=8.2e-13 Score=139.05 Aligned_cols=289 Identities=9% Similarity=-0.008 Sum_probs=181.0
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCce
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
.|+.|.+||..+++ ....+..+..+ .++|+|++++|++++ .++.|.+||..+. +.+.
T Consensus 29 ~d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-------~~~~ 95 (361)
T 2oiz_A 29 TESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL-------TFEK 95 (361)
T ss_dssp GGCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-------CEEE
T ss_pred ccCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-------cEEE
Confidence 47799999988876 33455555555 899999999999886 3677999998874 5555
Q ss_pred EEcCC------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceecccc-ccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 267 SFSGH------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKP-LVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 267 ~~~~h------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
++... ......++++|++ ++|+++.. +++|.+||+.+.+ .... +. +. ....+.+.|++...+++
T Consensus 96 ~i~~~~~~~~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~----~~~~~i~-~~-~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 96 EISLPPKRVQGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGD----YVEDVTA-AA-GCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp EEEECTTBCCBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTE----EEEEEGG-GT-TEEEEEECTTSSSEEEE
T ss_pred EEEcCccccccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCc----EEEEEec-CC-CcceeEEcCCCCeeEEE
Confidence 55432 2345689999999 67776653 6899999999875 2333 22 21 22336678887667889
Q ss_pred EECCCeEEEEECCCCCccc-cee--ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-----
Q psy4510 338 CSVDLSIRIWDTRVINTKS-CML--TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH----- 409 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~-~~~--~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----- 409 (812)
.+.||.+.+|+........ ... .....+..++ .+.+++++..++..+.++.|.++|+.... ...+..+..
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~-~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDE-VKVDGPWSLLNDED 246 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSS-CEEEEEEESCCHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCC-ceecccccccCccc
Confidence 9999999999986422111 000 1112222222 23345667767777788999999986311 111111110
Q ss_pred -CC----CCEEEEEEccCCCcEEEEEEC----------CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 410 -HT----APVTTVEWHPTESSTFASGGA----------DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 410 -h~----~~v~~v~~~p~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
+. .....++|+|++..++++... .+.|.+||+.+.+ .+....... +.
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-----------------~v~~i~~~~-p~ 308 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-----------------RVARIPGRD-AL 308 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-----------------EEEEEECTT-CC
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-----------------EEEEEecCC-ee
Confidence 01 111126899997655555441 3479999998873 333333334 99
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCC
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
.++|+|++..++++.. +.+.+|+..+.....+............++++|++
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 9999999985555554 77788865443112222222344567788888884
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-13 Score=158.92 Aligned_cols=252 Identities=11% Similarity=-0.011 Sum_probs=169.3
Q ss_pred CCCCceEEEEeCCCCCCeEE-----EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLA-----TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~la-----t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++|| .|+.+..|++||+.+++... ...+... ....++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGG--KYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCC--TTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcc--cccceEEecCCCEEEEEEecCCCC
Confidence 5667799999999 999999 55566789999999886310 1112111 1268999999999999988765
Q ss_pred -----------eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC----cEEEEeCCCCCcceec
Q psy4510 247 -----------LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR----NIHIWTPREAGAWQVD 311 (812)
Q Consensus 247 -----------i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~ 311 (812)
|++|++.++.. ....+.....|...+.++.|+|+| .+|+.++.++ .|++|+..++.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~---~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~----- 263 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPS---KDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKD----- 263 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGG---GCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSS-----
T ss_pred CccccCCCCCEEEEEECCCCch---hceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCc-----
Confidence 99999987510 011233334456688999999999 5555554444 56666654432
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEEEeCC
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~d 387 (812)
...+..+...+....| +++. +++++. .++.|.+||+.++.... ...+...+ ...+..++|+ ++.++++...+
T Consensus 264 ~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~d 339 (695)
T 2bkl_A 264 FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-GGHLSLEYLKD 339 (695)
T ss_dssp CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-TTEEEEEEEET
T ss_pred eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-CCEEEEEEEEC
Confidence 3344455556666667 6676 666665 35899999997543211 12221223 4567888888 66788999999
Q ss_pred CcEEEEecCCCCCCCceEEcccC-CCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCCC
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVER 445 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~~ 445 (812)
+..+||.+.. .+..+..+..+ .+.|..+.++|++..++++.+. .++|.+||+.+..
T Consensus 340 g~~~l~~~~~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 340 ATSEVRVATL--KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TEEEEEEEET--TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CEEEEEEEeC--CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9988887653 24455666655 6678888999987555555443 4679999998763
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-11 Score=136.69 Aligned_cols=239 Identities=13% Similarity=0.021 Sum_probs=161.0
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.+.++++...++.|.++|..+++ ....+.. ...+..++|+|+|+++++++.++.|.+||+... ..+.+.+
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~----v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~-----t~~~v~~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYE----IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK-----EPTTVAE 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCC----EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSS-----SCCEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCe----EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCC-----CCcEeEE
Confidence 45567777889999999999876 3333332 234668999999999999999999999999511 1255566
Q ss_pred EcCCCCcEEEEEec----CCCCCEEEEEeCCCcEEEEeCCCCCcceecc-cc--cc---CC-CCCEEEEEEcCCCCeEEE
Q psy4510 268 FSGHLTEGFAMDWS----STEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KP--LV---GH-TNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 268 ~~~h~~~v~~l~~s----p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~--~~---~h-~~~v~~~~~~p~~~~~l~ 336 (812)
+.. ......++|+ |+|+.++++...+++|.++|..+.+...... .. .. .| ...+..+..++++..+++
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 654 3346799999 6984445555567999999988766321111 01 00 12 226888999999887777
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEccc-----C
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKH-----H 410 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~-----h 410 (812)
+....|.|.++|....... .+..+ ........+.|+|++++++++. .++.|.++|+.+ ++.+..+.. |
T Consensus 315 ~~~~~g~v~~vd~~~~~~~-~v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t---~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNNL-KTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDTGGQTPH 388 (567)
T ss_dssp EETTTTEEEEEETTCSSEE-EEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSSBC
T ss_pred EecCCCeEEEEecCCCccc-eeeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECCC---CcEEEEEeccCcCCC
Confidence 7778899999998753211 12222 2334567889999999765554 678999999984 444444432 4
Q ss_pred CCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCCC
Q psy4510 411 TAPVTTVEWHPTESSTFASGG-ADDQIALWDLAVE 444 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~ 444 (812)
.+.-..+ ++|++..+++++. .++.|.++|....
T Consensus 389 pg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 389 PGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred Cccceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 3222222 5787555555553 4689999999874
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-12 Score=134.47 Aligned_cols=235 Identities=11% Similarity=0.049 Sum_probs=160.6
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~v 249 (812)
++...+.+++|+| ++++++++..++.|.+||..+++. ......+...+.+++++++++++++...+ +.|.+
T Consensus 42 ~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 42 KKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEI----KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp SSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE----EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred ccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcE----EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 4556678999999 999888998899999999887652 22222456789999999999987777666 68999
Q ss_pred eeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
|+..++ .....+. .+...+.+++++|++ .++++... .+.|..++..++.. ..+..+...
T Consensus 117 ~d~~~~-------~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~ 183 (333)
T 2dg1_A 117 ATENGD-------NLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQNISV 183 (333)
T ss_dssp ECTTSC-------SCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEEEESS
T ss_pred EeCCCC-------EEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEE-----EEeecCCCc
Confidence 998774 2221222 244678999999998 66666543 24566666554331 122223345
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCC-Ccccc-----eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVI-NTKSC-----MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
+..++|+|+++.++++.+.++.|.+||++.. ..... ...+ ..+ ..+..++++++|+++++...++.|.+||.
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~-~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF-TGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC-CSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec-CCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 7899999999866666667899999998632 11111 0111 122 46788999999998888777899999998
Q ss_pred CCCCCCCceEEcccCCC------CEEEEEEccCCCcEEEEEECC
Q psy4510 396 RRFKKGSSVATFKHHTA------PVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~------~v~~v~~~p~~~~~l~s~~~d 433 (812)
. ++.+..+..+.. .+.+++|+|++. .|+.++.+
T Consensus 262 ~----g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~-~L~v~~~~ 300 (333)
T 2dg1_A 262 R----GYPIGQILIPGRDEGHMLRSTHPQFIPGTN-QLIICSND 300 (333)
T ss_dssp T----SCEEEEEECTTGGGTCSCBCCEEEECTTSC-EEEEEEEC
T ss_pred C----CCEEEEEEcCCCccccccCcceEEECCCCC-EEEEEeCc
Confidence 4 345555544332 588999999864 45444443
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-11 Score=133.00 Aligned_cols=317 Identities=11% Similarity=0.034 Sum_probs=194.0
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
.++++...++.|.++|..+. ..+.++. ....+..+.|+|+|+++++++.++.|.+||+.. .+.+.+..+....
T Consensus 168 ~~~V~~~~~~~V~viD~~t~---~v~~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~-~t~~~v~~i~~G~- 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTY---EIKTVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWM-KEPTTVAEIKIGS- 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTTC---CEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-SSCCEEEEEECCS-
T ss_pred eEEEEeCCCCeEEEEECCCC---eEEEEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCC-CCCcEeEEEecCC-
Confidence 46777888999999999843 3344442 234567999999999999999999999999951 0345666666433
Q ss_pred CEEEEEEc----cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec---------CCCceeEEEEc
Q psy4510 413 PVTTVEWH----PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL---------GQKEIKELHWH 479 (812)
Q Consensus 413 ~v~~v~~~----p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~ 479 (812)
....++|+ |+|..++++...+++|.++|..+.+.. ..+.... ....+..+..+
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~--------------~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK--------------KIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE--------------EEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE--------------EEEeccccccccccccCCCceEEEEEc
Confidence 45789999 688655555566799999998776321 0010000 01134445555
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 480 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
++.+..++.....+........ .. ..
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~----------------------~~--~~------------------------------ 332 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYT----------------------DL--NN------------------------------ 332 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETT----------------------CS--SE------------------------------
T ss_pred CCCCEEEEEecCCCeEEEEecC----------------------CC--cc------------------------------
Confidence 5444333333222211111110 00 00
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
+.............+.|+|+|+++++++ ..++.|.++|+.+++.
T Consensus 333 -------------------~~v~~i~~~~~~~d~~~~pdgr~~~va~-~~sn~V~ViD~~t~kl---------------- 376 (567)
T 1qks_A 333 -------------------LKTTEISAERFLHDGGLDGSHRYFITAA-NARNKLVVIDTKEGKL---------------- 376 (567)
T ss_dssp -------------------EEEEEEECCSSEEEEEECTTSCEEEEEE-GGGTEEEEEETTTTEE----------------
T ss_pred -------------------ceeeeeeccccccCceECCCCCEEEEEe-CCCCeEEEEECCCCcE----------------
Confidence 0000111122455778999999988875 5688999999998762
Q ss_pred CCCCCCCCCeeee-----cCCCCceEEEEeCCCCCCeEEecC-CCceEEEEecCC-------CceeEE----------EE
Q psy4510 640 KGPGIPTPPLFSF-----SGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPRE-------AGAWSV----------YL 696 (812)
Q Consensus 640 ~~~~~~~~~~~~~-----~gh~~~V~~l~~sp~~~~~las~s-~Dg~v~iWd~~~-------~~~~~~----------~~ 696 (812)
+..+ ..|.+....+ ++|+.+.+++++. .+++|.++|..+ -+++.. +.
T Consensus 377 ---------~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~ 446 (567)
T 1qks_A 377 ---------VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIK 446 (567)
T ss_dssp ---------EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred ---------EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEE
Confidence 1111 1243322222 5774355555553 578999999987 233322 23
Q ss_pred ecCCCCEEEeecC-------CCeEEEeecCCC-----CC-ccccc-c---cccCCCcceeEeEEecCCceeEEeec----
Q psy4510 697 YTNRFGVLATGDC-------KRNIHIWTPREA-----GA-WQVDQ-K---PLVGHTNSVEDLQWSPGEKRVLASCS---- 755 (812)
Q Consensus 697 ~s~dg~~lasgs~-------dg~i~iwd~~~~-----~~-~~~~~-~---~~~gH~~~V~~l~fs~dg~~~L~s~s---- 755 (812)
.+|++++|.+... ...|.++|+.+. .. +..+. . .+..-...+..+.|+|+|+++++|..
T Consensus 447 ~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~ 526 (567)
T 1qks_A 447 THPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKD 526 (567)
T ss_dssp CCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTT
T ss_pred eCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCC
Confidence 6899998887653 469999999876 21 01010 0 11112357899999999997777743
Q ss_pred cCCceEEeeecCcce
Q psy4510 756 VDRSNRIGARRDMLY 770 (812)
Q Consensus 756 ~Dg~i~iWd~~~~~~ 770 (812)
.++.|.|+|.+..+.
T Consensus 527 ~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 527 QESALVVVDDKTLEL 541 (567)
T ss_dssp SCCEEEEEETTTTEE
T ss_pred CCCcEEEEECCCceE
Confidence 479999999998873
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.3e-12 Score=130.04 Aligned_cols=242 Identities=9% Similarity=0.143 Sum_probs=167.3
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEc------CCCCcEEEEEec-CCCCCEEEEEe
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS------GHLTEGFAMDWS-STEPGVLATGD 292 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~s-p~~~~~l~sg~ 292 (812)
.++-..+.+++++++++++++...++.|.+|+... +.+..+. +|...+.++++. +++ .++++..
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g--------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~ 96 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG--------RFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTER 96 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS--------CEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEEC
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC--------cEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcC
Confidence 35667789999999999888888899999999764 3344442 344678999995 565 5555553
Q ss_pred C-CCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCe
Q psy4510 293 C-KRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDV 369 (812)
Q Consensus 293 ~-dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v 369 (812)
. ++.|++|+. ++. ....+ ..+...+.+++++|++. ++++...++.|.+||... ..+..+. ..+...+
T Consensus 97 ~~~~~i~~~d~-~g~----~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~p 166 (286)
T 1q7f_A 97 SPTHQIQIYNQ-YGQ----FVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG----NVLHKFGCSKHLEFP 166 (286)
T ss_dssp GGGCEEEEECT-TSC----EEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS----CEEEEEECTTTCSSE
T ss_pred CCCCEEEEECC-CCc----EEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC----CEEEEeCCCCccCCc
Confidence 3 789999994 443 12222 23446789999999997 788877889999999652 2223321 1344568
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC--CCCEEEEEEccCCCcEEEEEECCC-CEEEEEcCCCCc
Q psy4510 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFASGGADD-QIALWDLAVERD 446 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~dg-~v~iwd~~~~~~ 446 (812)
..++++++++++++...++.|++||.. +..+..+..+ ...+.+|+++|++ +++++...++ .|.+||......
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQLI 241 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSCEE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCC----CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCCCEE
Confidence 999999999988888889999999974 4556666443 3678999999987 6777777775 999999643310
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.....+.....+..++++|++. ++++..+..+.+|+...
T Consensus 242 ---------------~~~~~~~~~~~~~~i~~~~~g~-l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 ---------------SALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ---------------EEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEECSC
T ss_pred ---------------EEEcccCCCCcceeEEECCCCc-EEEECCCCeEEEEEccc
Confidence 1111222223478999999874 55565444566776443
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-12 Score=129.61 Aligned_cols=239 Identities=8% Similarity=-0.030 Sum_probs=167.8
Q ss_pred ceEEEEeCCCCCCeEE-EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 178 ~i~~~~~sp~~~~~la-t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
...+++++| ++++++ +.+.++.|.+|+..+... ......+...+.+++++++++.+++.. ++.|.+|+....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~- 97 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN- 97 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS-
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCccc----ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc-
Confidence 788999999 999887 557788999998765442 111223445788999999998666555 889999998763
Q ss_pred CCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 257 GPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 257 ~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
....+. .....+.++++.+++ .++++...++.|.+|+..+... ..........+.++++++++. ++
T Consensus 98 -------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 98 -------NQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp -------CCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCC-EE
T ss_pred -------eEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCC-EE
Confidence 222222 223578999999988 6777777788999997654431 111122334678999999997 77
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
++...++.|.+||..... .......+...+..++++++|.++++...++.|.+|+... .........+...+.
T Consensus 165 v~~~~~~~i~~~~~~~~~----~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS---TTSTVLPFTGLNTPL 237 (270)
T ss_dssp EEEGGGTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC---SCCEECCCCSCSCEE
T ss_pred EEECCCCEEEEEecCCCc----eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC---CcceeeccCCCCCce
Confidence 777778999999987422 1122123336789999999998888777788999999863 222222223346789
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+++++|++ +++++...+++|+++++...
T Consensus 238 ~i~~~~~g-~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 238 AVAVDSDR-TVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEECTTC-CEEEEEGGGTEEEEECCCGG
T ss_pred eEEECCCC-CEEEEECCCCEEEEEcCCCc
Confidence 99999987 58888888999999998765
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-12 Score=134.57 Aligned_cols=239 Identities=9% Similarity=0.031 Sum_probs=167.5
Q ss_pred CCCCceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 174 GHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
.+.....+++|+| +++ +++++..++.|.+|+..++ . ..+..+...+.+++++++|+++++...++.|.+|+.
T Consensus 25 ~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 25 DGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ-L-----SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC-E-----EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred cCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC-e-----EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 3455678999999 888 8889988999999998875 1 233456678999999999998877777789999998
Q ss_pred CCCCCCCCCCCCceEEcCC----CCcEEEEEecCCCCCEEEEE----e-------------CCCcEEEEeCCCCCcceec
Q psy4510 253 KRGKGPGIPTPPLFSFSGH----LTEGFAMDWSSTEPGVLATG----D-------------CKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~~~~l~sg----~-------------~dg~i~vwd~~~~~~~~~~ 311 (812)
.++ +........ ...+..++++|+| .++++. . ..+.|..++.. +.
T Consensus 98 ~~g-------~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~----- 163 (296)
T 3e5z_A 98 PGG-------EWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT----- 163 (296)
T ss_dssp TTC-------CEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----
T ss_pred CCC-------cEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CC-----
Confidence 765 221111111 1245679999998 677763 2 12455555554 32
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc-cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
...+..+......++|+|+++. +++.+.++.|.+|++...... .....+ ..+...+..++++++|+++++. ++.|
T Consensus 164 ~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 164 LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence 2334456667899999999995 578888899999998721111 112223 3455667889999999866665 7889
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEE-ccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEW-HPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+||.. ++.+..+..+.. +++++| .|++ ..|++++.++ +..++..+.
T Consensus 240 ~~~~~~----g~~~~~~~~~~~-~~~~~f~~~d~-~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 240 HVLTPD----GDELGRVLTPQT-TSNLCFGGPEG-RTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEECTT----SCEEEEEECSSC-CCEEEEESTTS-CEEEEEETTE-EEEEECSCC
T ss_pred EEECCC----CCEEEEEECCCC-ceeEEEECCCC-CEEEEEcCCe-EEEEEcccc
Confidence 999984 566777777777 899999 5765 5677777653 555565554
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.53 E-value=7.9e-13 Score=138.96 Aligned_cols=255 Identities=8% Similarity=0.014 Sum_probs=163.1
Q ss_pred CceEEEEeCCCCCCeEEEe---------cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---
Q psy4510 177 TEGFAMDWSSTEPGVLATG---------DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP--- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~---------~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d--- 244 (812)
..+...++ +|+.||.. +.++.|.+|++.+++. ..+ ..+..++|||+|++|+.++.+
T Consensus 15 ~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l----~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-----RFI----ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-----EEE----ESCEEEEECTTSSEEEEEEEETTT
T ss_pred EEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCce-----EEc----ccCCCeEECCCCCEEEEEEeccCC
Confidence 45666777 67766643 2356799999987652 122 568899999999999988753
Q ss_pred Cc--eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---------------------------CC
Q psy4510 245 FQ--LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---------------------------KR 295 (812)
Q Consensus 245 ~~--i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---------------------------dg 295 (812)
+. |.+|++.++ +.. .+..+.. +..++|+|++ ..|+.++. ..
T Consensus 83 ~~~~l~~~~~~~g-------~~~-~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 83 KVSEIWVADLETL-------SSK-KILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp TEEEEEEEETTTT-------EEE-EEEEESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEE
T ss_pred CcceEEEEECCCC-------ceE-EEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 33 777777764 222 2333334 9999999999 56666543 25
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-------eEEEEECCCCCcccceeecCCcCCCC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-------SIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
.|++|++.++.. ...+.. . .+..++|+|++ +++++..++ ...||.+.++ . ...+ ..+ ..
T Consensus 153 ~l~~~d~~~~~~----~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~-~---~~~l-~~~-~~ 218 (347)
T 2gop_A 153 TFWIFDTESEEV----IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG-K---EEKM-FEK-VS 218 (347)
T ss_dssp EEEEEETTTTEE----EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT-E---EEEE-EEE-ES
T ss_pred eEEEEECCCCeE----EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCC-c---eEEe-ccC-cc
Confidence 789999987652 122332 2 68899999999 577766542 3455544421 1 2222 223 44
Q ss_pred eEEEEEcCCCCEEEEEeCC--------CcEEEEecCCCCCCCceEEcccCCCCEEE-EEEccCCCcEEEEEECCCCEEEE
Q psy4510 369 VNVISWNRTEPLIVSGGDD--------GCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
+..+ +|+|+.|+.++.+ ..|.+|| . +........|...+.. +.|+ ++ ++++++.++.+++|
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~----~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G----KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY 288 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S----SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC-C----CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE
Confidence 5544 8999977776644 3677777 2 3334444556778886 9999 64 88888999999999
Q ss_pred EcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-e-EEEE
Q psy4510 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-F-NIFR 498 (812)
Q Consensus 440 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~-~~~~ 498 (812)
+..+ .......+...|.+++|+| .++++.+.++ . .+|.
T Consensus 289 -~~~g-----------------~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 289 -IWDG-----------------EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFT 328 (347)
T ss_dssp -EESS-----------------SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEE
T ss_pred -EcCC-----------------ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheE
Confidence 8733 2222333456789999999 3555544433 2 4554
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=7e-11 Score=120.92 Aligned_cols=283 Identities=9% Similarity=-0.033 Sum_probs=190.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+...+.++++.| +|+++++...++.|.+|+.. +.. ....+..+...+.+++++++++.+++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKI---TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCe---EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3456799999999 99988887777899999987 431 112223355789999999999988877778889999875
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.. .....+......+.++++.+++ .++++...++.|.+|+. ++.. .......+...+..+++.+++.
T Consensus 87 g~-------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~- 153 (299)
T 2z2n_A 87 GI-------IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKI---REYELPNKGSYPSFITLGSDNA- 153 (299)
T ss_dssp SC-------EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSC-
T ss_pred Cc-------EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCE---EEecCCCCCCCCceEEEcCCCC-
Confidence 31 1111222345678999999987 67777767889999998 4432 1112233456789999999987
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
++++...++.|..||. ++.. . .... ..+...+..+++.++++++++...++.|.+||. . ..........+...
T Consensus 154 l~v~~~~~~~i~~~~~-~g~~-~-~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--g~~~~~~~~~~~~~ 226 (299)
T 2z2n_A 154 LWFTENQNNAIGRITE-SGDI-T-EFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S--GEITEFKIPTPNAR 226 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCE-E-EEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--CCEEEEECSSTTCC
T ss_pred EEEEeCCCCEEEEEcC-CCcE-E-EeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-C--CcEEEEECCCCCCC
Confidence 6776666789999998 3221 1 1112 234556889999999997777767889999998 3 11111223345577
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
+.++++.+++ +++++...++.|..||.. ... .......+...+.++.+ +++ .+.+++..++
T Consensus 227 ~~~i~~~~~g-~l~v~~~~~~~i~~~d~~-g~~---------------~~~~~~~~~~~~~~i~~-~~g-~l~v~~~~~~ 287 (299)
T 2z2n_A 227 PHAITAGAGI-DLWFTEWGANKIGRLTSN-NII---------------EEYPIQIKSAEPHGICF-DGE-TIWFAMECDK 287 (299)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEEETT-TEE---------------EEEECSSSSCCEEEEEE-CSS-CEEEEETTTE
T ss_pred ceeEEECCCC-CEEEeccCCceEEEECCC-Cce---------------EEEeCCCCCCccceEEe-cCC-CEEEEecCCc
Confidence 8999999987 466655567889999983 210 11111122346888888 664 4555655666
Q ss_pred eEEEEeC
Q psy4510 494 FNIFRTI 500 (812)
Q Consensus 494 ~~~~~~~ 500 (812)
+..++..
T Consensus 288 l~~~~~~ 294 (299)
T 2z2n_A 288 IGKLTLI 294 (299)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 6666543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.6e-11 Score=126.03 Aligned_cols=238 Identities=11% Similarity=0.059 Sum_probs=165.8
Q ss_pred CCCeeeeeEcCCCCcEEEeeCC------------------------CceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEE
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDP------------------------FQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFA 277 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d------------------------~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~ 277 (812)
-+.+.+|+++++|+.+++...+ +.|.+||..++ +.+..+. ++......
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA-------EILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC-------CEEEEECTTTCSSEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC-------eEEeccCCCccCCceE
Confidence 4679999999999988887766 47999998765 3333333 34467899
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc---------cCCCCCEEEEEEcC-CCCeEEEEEE-CCCeEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---------VGHTNSVEDLQWSP-GEKRVLASCS-VDLSIRI 346 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p-~~~~~l~s~~-~dg~i~i 346 (812)
++++|++ .++++...++.|++|+...... ....+ .++......++++| ++. ++++.+ .++.|++
T Consensus 96 ia~d~~g-~l~v~d~~~~~v~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 96 LSIDTDG-NYWVTDVALHQVFKLDPHSKEG---PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQ 170 (329)
T ss_dssp EEECTTS-CEEEEETTTTEEEEECTTCSSC---CSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEE
T ss_pred EEECCCC-CEEEEECCCCEEEEEeCCCCeE---EEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEE
Confidence 9999998 6888888889999999865421 11111 24455789999999 565 777776 6999999
Q ss_pred EECCCCCcccceeecC---------CcCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEc--ccCCCCE
Q psy4510 347 WDTRVINTKSCMLTLP---------NAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATF--KHHTAPV 414 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v 414 (812)
|+.. ...+..+. .++-.....|+++|+ +.++++...++.|++||.. .++.+..+ ..+...+
T Consensus 171 ~~~~----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 171 FSPS----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD---TKEFVREIKHASFGRNV 243 (329)
T ss_dssp ECTT----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEECCTTTTTCE
T ss_pred EcCC----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC---CCcEEEEEeccccCCCc
Confidence 9953 22233331 112234889999998 6788888889999999996 36666666 3456788
Q ss_pred EEEEEccCCCcEEEEEE-------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee----cCCCceeEEEEcCCCC
Q psy4510 415 TTVEWHPTESSTFASGG-------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH----LGQKEIKELHWHPQLP 483 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~~~ 483 (812)
.+++|+| + ..+++.+ .+.+|++||+...+ ++... .....+..++++|++
T Consensus 244 ~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~-----------------~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 244 FAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGE-----------------IIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp EEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCC-----------------EEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCe-----------------EEEEEcCCCCccCCeeEEEECCCC-
Confidence 9999999 3 3444433 24489999988773 33322 223468899999997
Q ss_pred CEEEEEe-CCCeEEEEe
Q psy4510 484 GTIISTA-NSGFNIFRT 499 (812)
Q Consensus 484 ~~~~~~~-~~~~~~~~~ 499 (812)
.++++.. .+.+.+|..
T Consensus 304 ~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred CEEEEECCCCEEEEEeC
Confidence 4555554 444556543
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.48 E-value=9e-12 Score=127.54 Aligned_cols=239 Identities=13% Similarity=0.060 Sum_probs=160.5
Q ss_pred cCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 219 LGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+..+.....+++|+|+++ .++++..++.|.+|+..+ . ...+..+...+.+++++|++ .++++...++.|
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~--------~-~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG--------Q-LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS--------C-EEEEESSCSSEEEEEECTTC-CEEEEETTTTEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC--------C-eEEEECCCCCcceeeECCCC-cEEEEecCCCeE
Confidence 334556678999999998 677778889999999876 3 56667777889999999998 677777667899
Q ss_pred EEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEEC-----------------CCeEEEEECCCCCccccee
Q psy4510 298 HIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSV-----------------DLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~ 359 (812)
.+||..++..... .....+ ....+++++++|+|+ ++++.+. .+.|..++.. + .+.
T Consensus 93 ~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~ 165 (296)
T 3e5z_A 93 ERQREPGGEWESI-ADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----TLS 165 (296)
T ss_dssp EEECSTTCCEEEE-ECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----CEE
T ss_pred EEEcCCCCcEEEE-eeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C----CEE
Confidence 9999977652111 111111 123577899999998 6776321 2455555543 1 122
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc---eEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS---VATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
.+ ..+....+.++|+|+++++++.+.++.|.+|++.. .+.. ...+..+...+.++++.++| +++++. ++.|
T Consensus 166 ~~-~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v 239 (296)
T 3e5z_A 166 AP-IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA--RGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGV 239 (296)
T ss_dssp EE-ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS--SSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEE
T ss_pred Ee-ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC--CCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeE
Confidence 22 34556679999999999778888889999999963 2222 22333355567789999997 455554 7889
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCCeEEEEe
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~~~~~~~ 499 (812)
.+||.... .+........ +.+++|. |++..+++ ++.+++..++.
T Consensus 240 ~~~~~~g~-----------------~~~~~~~~~~-~~~~~f~~~d~~~L~v-~t~~~l~~~~~ 284 (296)
T 3e5z_A 240 HVLTPDGD-----------------ELGRVLTPQT-TSNLCFGGPEGRTLYM-TVSTEFWSIET 284 (296)
T ss_dssp EEECTTSC-----------------EEEEEECSSC-CCEEEEESTTSCEEEE-EETTEEEEEEC
T ss_pred EEECCCCC-----------------EEEEEECCCC-ceeEEEECCCCCEEEE-EcCCeEEEEEc
Confidence 99998633 2223333334 8899994 66644444 44566555544
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-12 Score=136.95 Aligned_cols=223 Identities=9% Similarity=0.092 Sum_probs=149.5
Q ss_pred CceEEEEeCCCCCCeEEEecCC---C--cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCK---R--NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~d---g--~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------- 244 (812)
..+..++||| +|+.||.++.+ + .|.+|++.+++. . .+..+.. +.+++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~----~-~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSS----K-KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEE----E-EEEEESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCce----E-EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence 4577899999 99999877643 3 377778776542 2 2222333 9999999999999888642
Q ss_pred --------------------CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-------cE
Q psy4510 245 --------------------FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-------NI 297 (812)
Q Consensus 245 --------------------~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-------~i 297 (812)
..|.+|++.++ +.+..+.. . .+..++|+|++ +++++..++ ..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~-------~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESE-------EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTT-------EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCC-------eEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccc
Confidence 56888998774 33234443 3 77899999997 766665542 44
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCe
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDV 369 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v 369 (812)
.||.+. .+. ...+..+ ..+..+ +|+|+. |+.++.+ ..|.+|| ++ . ...+...+...+
T Consensus 201 ~l~~~d-~~~----~~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~---~-~~~l~~~~~~~~ 265 (347)
T 2gop_A 201 DIYIWE-DGK----EEKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GK---E-VMGILDEVDRGV 265 (347)
T ss_dssp EEEEEE-TTE----EEEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SS---C-EEESSTTCCSEE
T ss_pred cEEEeC-CCc----eEEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CC---c-eEeccccCCccc
Confidence 555554 331 2233334 445544 999996 5555433 4678887 22 1 233335566778
Q ss_pred EE-EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE-EEEEcC
Q psy4510 370 NV-ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI-ALWDLA 442 (812)
Q Consensus 370 ~~-l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v-~iwd~~ 442 (812)
.. +.|+ ++ ++++++.++.++|| +. .+.. ..+..+...|.+++|+| .++++++.++.. .+|.+.
T Consensus 266 ~~~~~~s-dg-~~~~~~~~~~~~l~-~~---~g~~-~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 266 GQAKIKD-GK-VYFTLFEEGSVNLY-IW---DGEI-KPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEET-TE-EEEEEEETTEEEEE-EE---SSSE-EEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred CCccEEc-Cc-EEEEEecCCcEEEE-Ec---CCce-EEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 86 9999 88 99999999999999 86 2333 33444577899999998 377777777665 788775
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-11 Score=141.72 Aligned_cols=163 Identities=9% Similarity=-0.032 Sum_probs=105.4
Q ss_pred CCCCcEEEEEecCCCCCEEE-----EEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe-
Q psy4510 270 GHLTEGFAMDWSSTEPGVLA-----TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS- 343 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~-----sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~- 343 (812)
+|...+.+++|||+| .+|| .|+.+..|++||+.++... ....+... ....++|+|+++. |+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~--~~~~~~~~--~~~~~~wspDg~~-l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWS--KVDVIEGG--KYATPKWTPDSKG-FYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBC--SSCCBSCC--TTCCCEECTTSSE-EEEEECCCCT
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCc--CCcccCcc--cccceEEecCCCE-EEEEEecCCC
Confidence 455578999999999 5666 3334568999999988621 01111111 1268999999994 777777665
Q ss_pred ------------EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceEEc
Q psy4510 344 ------------IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG----CIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 344 ------------i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~ 407 (812)
|++|++.++.....+......+...+..+.|+|+|++|+.++.++ .|.+|+.. ......+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~----~~~~~~l 267 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG----EKDFRLL 267 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT----CSSCEEE
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC----CCceEEe
Confidence 999999865432222222244566889999999999777766555 56666543 2234555
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
..+...+....| +++. +++++.. ++.|.+||+...
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 556666666666 5665 5555442 467778877554
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-11 Score=139.69 Aligned_cols=241 Identities=9% Similarity=-0.066 Sum_probs=153.6
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPF-----QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+|...+..++|||||++|+.+..++ .|++||+.++ +.+..... ...+..++|+|++ ..|+.++.+
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg-------~~~~~~~~-~~~~~~~~wspDg-~~l~~~~~~ 191 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA-------KELPDVLE-RVKFSCMAWTHDG-KGMFYNAYP 191 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT-------EEEEEEEE-EECSCCEEECTTS-SEEEEEECC
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC-------CCCccccc-CcccceEEEEeCC-CEEEEEEEC
Confidence 35666789999999999998776433 8999999886 32221111 1225679999999 677777766
Q ss_pred Cc----------------EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCC---
Q psy4510 295 RN----------------IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRV--- 351 (812)
Q Consensus 295 g~----------------i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~--- 351 (812)
+. |++|++.++............|...+..+.|+|+|+.++++... +..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 65 99999987652111222223355668899999999965554432 57899999874
Q ss_pred ---CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEecCCCCCCCceEEcccCCC--CEEEEEEccC
Q psy4510 352 ---INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD----GCIHVWDLRRFKKGSSVATFKHHTA--PVTTVEWHPT 422 (812)
Q Consensus 352 ---~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~p~ 422 (812)
+.. ....+ ..+...+.. .|+++|..|+..+.. +.|.+||+..... .....+..|.. .+..+.|++.
T Consensus 272 ~~~~~~--~~~~l-~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 346 (710)
T 2xdw_A 272 GITGIL--KWVKL-IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHEKDVLEWVACVRS 346 (710)
T ss_dssp SSCSSC--CCEEE-ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCEEEEEEEETT
T ss_pred ccCCcc--ceEEe-eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccceeccCCCCCCeEEEEEEEcC
Confidence 211 23333 334444444 478888866655543 3699999874210 12344444544 6888999865
Q ss_pred CCcEEEEEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 423 ESSTFASGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 423 ~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
+ .++++...++. |.+|++..++ .+.........+..+.++|++..++++.+.
T Consensus 347 ~-~lv~~~~~~g~~~l~~~~~~~g~----------------~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 347 N-FLVLCYLHDVKNTLQLHDLATGA----------------LLKIFPLEVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp T-EEEEEEEETTEEEEEEEETTTCC----------------EEEEECCCSSEEEEEECCTTCSEEEEEEEC
T ss_pred C-EEEEEEEECCEEEEEEEECCCCC----------------EEEecCCCCceEEEEecCCCCCEEEEEEeC
Confidence 4 68888888885 5566664442 111222224567888999987666665544
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.41 E-value=3.7e-11 Score=124.06 Aligned_cols=251 Identities=7% Similarity=0.053 Sum_probs=166.4
Q ss_pred CCCceEEEEeCCCCCCeEEE-------ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCc
Q psy4510 175 HLTEGFAMDWSSTEPGVLAT-------GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQ 246 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat-------~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~ 246 (812)
......+++|++ +++++++ +..++.|.+|+..+++..........++...+.+++++++ ++++++.. .+.
T Consensus 16 ~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 16 DIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp CCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred cCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 334567899998 9998888 6778899999987765321111111235577999999999 76555443 447
Q ss_pred eEEeeCCCCCCCCCCCCCc-eEE-cC-CCCcEEEEEecCCCCCEEEEEeCC---------------CcEEEEeCCCCCcc
Q psy4510 247 LAEHNKKRGKGPGIPTPPL-FSF-SG-HLTEGFAMDWSSTEPGVLATGDCK---------------RNIHIWTPREAGAW 308 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~-~~~-~~-h~~~v~~l~~sp~~~~~l~sg~~d---------------g~i~vwd~~~~~~~ 308 (812)
|.+|+.. +. ...+ ... .+ ....+.++++.+++ .++++...+ +.|..|+.. +.
T Consensus 94 l~~~d~~-g~-----~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-- 163 (314)
T 1pjx_A 94 LLVVQTD-GT-----FEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-- 163 (314)
T ss_dssp EEEEETT-SC-----EEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--
T ss_pred EEEEeCC-CC-----EEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CC--
Confidence 8889877 41 1111 100 11 12357899999998 666666544 467777765 32
Q ss_pred eeccccccCCCCCEEEEEEc----CCCCeEEEEEECCCeEEEEECCCCCcc---cceeecCCcCC-CCeEEEEEcCCCCE
Q psy4510 309 QVDQKPLVGHTNSVEDLQWS----PGEKRVLASCSVDLSIRIWDTRVINTK---SCMLTLPNAHT-SDVNVISWNRTEPL 380 (812)
Q Consensus 309 ~~~~~~~~~h~~~v~~~~~~----p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~-~~v~~l~~~~~~~~ 380 (812)
...+..+......++|+ |+++.++++...++.|.+||+...... .....+ ..+. ..+..++++++|++
T Consensus 164 ---~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 164 ---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-PGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp ---EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-CCCSSCEEEEEEEBTTCCE
T ss_pred ---EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-CCCCCCCCCceEECCCCCE
Confidence 11222233457889999 999766666667899999997521111 112222 2333 56788999999998
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+++...++.|.+||.. +++.+..+..+...+.+++|+|++..++++...++.|..|++...
T Consensus 240 ~v~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPD---GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEETTTEEEEECTT---CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCEEEEEcCC---CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8888788899999986 245556666666789999999987435555556678999998754
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.39 E-value=9.3e-10 Score=112.51 Aligned_cols=279 Identities=10% Similarity=-0.036 Sum_probs=186.9
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
....+.++++.+ +|++.++...++.|.+|+.. ++. ....+..+...+.++++.++++..++...++.|.+++..
T Consensus 18 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 18 PDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRI---KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-Cce---EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 346788999999 89988888778999999987 432 112233445678999999999877777667889999876
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+ . .....+......+.++++.+++ .++++...++.|..++.. +.. ....+......+.++++.++++ +
T Consensus 92 g-----~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~---~~~~~~~~~~~~~~i~~d~~g~-l 159 (300)
T 2qc5_A 92 G-----G-FTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTI---YEYDLPNKGSYPAFITLGSDNA-L 159 (300)
T ss_dssp S-----C-EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECTTSS-E
T ss_pred C-----C-eEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCE---EEccCCCCCCCceeEEECCCCC-E
Confidence 3 1 1112223344678999999987 677776667899999987 432 1112233456789999999998 6
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce-EEcccCCCC
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAP 413 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~h~~~ 413 (812)
+++...++.|..+|.. +.. ..... ..+...+..+++.++++++++....+.|.+||.. +... ..+..+...
T Consensus 160 ~v~~~~~~~i~~~~~~-g~~--~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~ 231 (300)
T 2qc5_A 160 WFTENQNNSIGRITNT-GKL--EEYPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT----GEISEYDIPTPNAR 231 (300)
T ss_dssp EEEETTTTEEEEECTT-CCE--EEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT----CCEEEEECSSTTCC
T ss_pred EEEecCCCeEEEECCC-CcE--EEeeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC----CcEEEEECCCCCCC
Confidence 7776667899999983 221 11222 2344678999999999877777677889999983 2222 223345567
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
+.++++.+++ +++++...++.|..||.. ... ...........+.++.+.+++. +.++... +
T Consensus 232 ~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~---------------~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~-~ 292 (300)
T 2qc5_A 232 PHAITAGKNS-EIWFTEWGANQIGRITND-NTI---------------QEYQLQTENAEPHGITFGKDGS-VWFALKC-K 292 (300)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEECTT-SCE---------------EEEECCSTTCCCCCEEECTTSC-EEEECSS-E
T ss_pred ceEEEECCCC-CEEEeccCCCeEEEECCC-CcE---------------EEEECCccCCccceeEeCCCCC-EEEEccC-c
Confidence 8999999987 466665556889999973 311 1111112234578888888864 4444443 4
Q ss_pred eEEEE
Q psy4510 494 FNIFR 498 (812)
Q Consensus 494 ~~~~~ 498 (812)
+..+.
T Consensus 293 i~~~~ 297 (300)
T 2qc5_A 293 IGKLN 297 (300)
T ss_dssp EEEEE
T ss_pred eEEeC
Confidence 44443
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-10 Score=117.19 Aligned_cols=235 Identities=6% Similarity=-0.044 Sum_probs=155.2
Q ss_pred CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 225 SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
...+++++++++.++ +...++.|.+|+..+. ........+...+.++++.+++ .++++.. ++.|.+|+..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-------GTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc-------ccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCC
Confidence 677899999998666 4467889999987653 1111112233567889999988 5665555 8899999987
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
.... ..........+.++++.+++. ++++...++.|.+|+.... ...... ......+..++++++++++++
T Consensus 96 ~~~~----~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~---~~~~~~-~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 96 SNNQ----TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSK---TQTVLP-FTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp CSCC----EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCC---SCEECC-CCSCCSCCCEEECTTCCEEEE
T ss_pred CceE----eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCc---eeEeec-cccCCCceeEEEeCCCCEEEE
Confidence 6542 111112335789999999987 7777777899999976532 111111 233346788999999997777
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
...++.|.+||... .........+...+.+|++.+++ .++++...++.|.+|+...... .
T Consensus 167 ~~~~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~----------------~ 226 (270)
T 1rwi_B 167 DTDNNRVVKLEAES---NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS----------------T 226 (270)
T ss_dssp EGGGTEEEEECTTT---CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC----------------E
T ss_pred ECCCCEEEEEecCC---CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc----------------e
Confidence 77788999999863 22222223334678999999987 6777777788999999865521 1
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCC-CeEEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANS-GFNIFR 498 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~-~~~~~~ 498 (812)
.....+...+..+++++++. ++++...+ .+.+|.
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLT 261 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEEC
T ss_pred eeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEc
Confidence 11112224688999999975 55555544 444543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.9e-09 Score=110.11 Aligned_cols=271 Identities=10% Similarity=0.010 Sum_probs=176.6
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
+..+...+.+++++++|+.+++...++.|.+|+.. + . .....+..+...+.++++.+++ .++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~-----~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G-----K-ITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C-----C-EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C-----C-eEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEE
Confidence 33455689999999999977776668899999977 3 1 1111222345678999999988 6777766678899
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
.|+.. +.. ....+......+.++++.+++. ++++...++.|.+||.. +. ...... ..+...+..+++.+++
T Consensus 82 ~~~~~-g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~--~~~~~~-~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 82 RITKK-GII---KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDD-GK--IREYEL-PNKGSYPSFITLGSDN 152 (299)
T ss_dssp EECTT-SCE---EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CC--EEEEEC-SSTTCCEEEEEECTTS
T ss_pred EECCC-CcE---EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECCC-CC--EEEecC-CCCCCCCceEEEcCCC
Confidence 99986 321 1112223456789999999887 67777678899999983 22 111222 2345678999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceE-EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
.++++...++.|.+||. . +.... .+..+...+.++++.+++ .++++...++.|.+||. ....
T Consensus 153 ~l~v~~~~~~~i~~~~~-~---g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~----------- 215 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-S---GDITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEI----------- 215 (299)
T ss_dssp CEEEEETTTTEEEEECT-T---CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-----------
T ss_pred CEEEEeCCCCEEEEEcC-C---CcEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcE-----------
Confidence 88887777789999998 2 22222 233445678899999986 46666656788999998 4421
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCEEEEE-eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIIST-ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
...........+..+++++++. ++++. ..+++.+|+. .. .........+...+.++++ ++ +.+..+
T Consensus 216 ----~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g-~~~~~~~~~~~~~~~~i~~-~~--g~l~v~ 282 (299)
T 2z2n_A 216 ----TEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS-NN-IIEEYPIQIKSAEPHGICF-DG--ETIWFA 282 (299)
T ss_dssp ----EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET-TT-EEEEEECSSSSCCEEEEEE-CS--SCEEEE
T ss_pred ----EEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC-CC-ceEEEeCCCCCCccceEEe-cC--CCEEEE
Confidence 1111112235688999999865 55555 4456677765 22 2122212233457888888 66 444443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.4e-11 Score=140.04 Aligned_cols=249 Identities=13% Similarity=0.009 Sum_probs=161.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++||.++.+ ..|++||+.+++... ...+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~-----~~~~~~~~~~~~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 160 DGATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLA-----DELKWVKFSGLAWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp ---EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEE-----EEEEEEESCCCEESTT-SEEEEEECCCC--
T ss_pred CCCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCC-----ccCCCceeccEEEECC-CEEEEEEecCccc
Confidence 4545788999999 99999876543 469999999887421 1112223468999999 99988876543
Q ss_pred ------------eEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCc
Q psy4510 247 ------------LAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGA 307 (812)
Q Consensus 247 ------------i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~ 307 (812)
|++|++.++ .......+. .+...+..+.|||+| .+|+..+.+ ..|++||+.++..
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~-----~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTP-----QSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp ------CCCCCEEEEEETTSC-----GGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred ccccccCCCCCEEEEEECCCC-----chhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCC
Confidence 888888764 111222333 333468899999999 566555543 3899999977521
Q ss_pred ceeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 308 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
. ....+..+...+.... +|+++. |+..+. ++.|.+||+.... .....+...+...+..++|. ++.++++
T Consensus 307 ~--~~~~l~~~~~~~~~~~-~~dg~~-l~~~s~~~~~~~~l~~~d~~~~~--~~~~~l~~~~~~~l~~~~~~-~~~lv~~ 379 (741)
T 1yr2_A 307 G--PVTALIPDLKAQWDFV-DGVGDQ-LWFVSGDGAPLKKIVRVDLSGST--PRFDTVVPESKDNLESVGIA-GNRLFAS 379 (741)
T ss_dssp C--CCEEEECSSSSCEEEE-EEETTE-EEEEECTTCTTCEEEEEECSSSS--CEEEEEECCCSSEEEEEEEE-BTEEEEE
T ss_pred c--ccEEecCCCCceEEEE-eccCCE-EEEEECCCCCCCEEEEEeCCCCc--cccEEEecCCCCeEEEEEEE-CCEEEEE
Confidence 0 0233444444455553 488886 444443 4569999987532 12233324455557778887 5568888
Q ss_pred EeCCCcEEEEecCCCCCCCceEEccc-CCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
...++..+||.+.. .+..+..+.. +.+.|..+.++|++..++++.+. .++|.+||+.++
T Consensus 380 ~~~dg~~~l~~~~~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 380 YIHDAKSQVLAFDL--DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEETTEEEEEEEET--TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEECCEEEEEEEeC--CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 88899888876642 2445566654 36678899999987656555443 468999999775
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-10 Score=117.31 Aligned_cols=218 Identities=9% Similarity=-0.021 Sum_probs=156.6
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
.+++|++++.++.|.+||.++++ .+..+..+. ..+.+++++|+|+.|+ +.++.|..||. ++ +.+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~----~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-------~~~W 69 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE----IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG-------RELW 69 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE----EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-------CEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe----EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-------CEEE
Confidence 46899999999999999998877 455555555 5789999999999888 35678999998 54 6777
Q ss_pred EEcCCC-CcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccc-cccCCCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 267 SFSGHL-TEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQK-PLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 267 ~~~~h~-~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
.+..+. ..+.++.+.|++ +++++.+. ++.|..++......+..... ...++......+++.+++. ++++...++.
T Consensus 70 ~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~ 147 (276)
T 3no2_A 70 NIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSE 147 (276)
T ss_dssp EEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTE
T ss_pred EEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCE
Confidence 777653 578899999999 77777776 67777777632211111111 1112223455667899998 6888889999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC------CCEEEE
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT------APVTTV 417 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~------~~v~~v 417 (812)
|.+||.. ++ .+.++ .. .....++...++++++++++.++.|..+|.. +++.+..+..+. ..+.++
T Consensus 148 v~~~d~~-G~---~~w~~-~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~---tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 148 VREIAPN-GQ---LLNSV-KL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE---SNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp EEEECTT-SC---EEEEE-EC-SSCCCEEEECTTSCEEEECBTTSEEEEECTT---TCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred EEEECCC-CC---EEEEE-EC-CCCccceeEcCCCCEEEEeCCCCeEEEEeCc---CCcEEEEecCCCCCCccccccccc
Confidence 9999986 43 34444 22 2345667888999999998888899999986 477777775432 237888
Q ss_pred EEccCCCcEEEEEE
Q psy4510 418 EWHPTESSTFASGG 431 (812)
Q Consensus 418 ~~~p~~~~~l~s~~ 431 (812)
...+++ .++++..
T Consensus 219 ~~~~~G-~i~v~~~ 231 (276)
T 3no2_A 219 FPLQNG-GLYICNW 231 (276)
T ss_dssp EECTTS-CEEEEEE
T ss_pred eEcCCC-CEEEEec
Confidence 888887 5666653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-09 Score=111.82 Aligned_cols=146 Identities=9% Similarity=-0.056 Sum_probs=96.2
Q ss_pred cCCCCCEEEEEeC--CC---cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEE
Q psy4510 281 SSTEPGVLATGDC--KR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRI 346 (812)
Q Consensus 281 sp~~~~~l~sg~~--dg---~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~i 346 (812)
.|++ .++.+... .. +|.++|..+++ ....+.....+ .++++|+++.++++.. .++.|.+
T Consensus 29 ~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 29 GADG-RRSYINLPAHHSAIIQQWVLDAGSGS----ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCC-CEEEEeCCcccCCccEEEEEECCCCe----EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 3555 55555442 22 88999998876 23333333333 9999999997555542 3678999
Q ss_pred EECCCCCcccceeecCCc------CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEE-cccCCCCEEEE
Q psy4510 347 WDTRVINTKSCMLTLPNA------HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTV 417 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v 417 (812)
||+.+... +..+... +......+.|+|+|++|+++.. ++.|.++| . .++.+.. +... + ++
T Consensus 102 iD~~t~~~---~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~---t~~~~~~~i~~~-~---~~ 170 (373)
T 2mad_H 102 FDPVTFLP---IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q---GGSSDDQLLSSP-T---CY 170 (373)
T ss_pred EECCCCcE---EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C---CCCEEeEEcCCC-c---eE
Confidence 99975432 2322111 1123457999999998888764 57899999 7 4566666 5422 2 24
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+.|.+.+.+++.+.||.+.++|. ..+
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 566777677888888999999999 653
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-10 Score=117.12 Aligned_cols=232 Identities=12% Similarity=0.066 Sum_probs=155.5
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
.-+..|+|.++.++++...++.|+.||..++... .......+.+++++++++++++ . ++.|.+|+..++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~------~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g--- 83 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ------RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ--- 83 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE------EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT---
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE------EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC---
Confidence 4468899955677888888899999998876521 1123467999999999995554 3 567899998764
Q ss_pred CCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 259 GIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 259 ~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
..+.+..... ....+..+++.|+| .++++... .....||.+..... ...+..+....+.++|
T Consensus 84 --~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 84 --SAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQVDISNGLDW 156 (297)
T ss_dssp --EEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEEESBEEEEEE
T ss_pred --cEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeeccccccceEE
Confidence 1111111111 12357899999998 55554422 13345665554332 1112233345789999
Q ss_pred cCCCCeEEEEEECCCeEEEEECC--CCCc--ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR--VINT--KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~--~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+|+++.++++.+.++.|.+|++. ++.. ...+..+ ..+......+++.++|++.++....+.|.+||.. +++.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~-~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~---tG~~ 232 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL-EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV---TGKR 232 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC-CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT---TCCE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC-CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC---CceE
Confidence 99999777777778999999974 2211 1112222 2334567899999999988888788899999986 4677
Q ss_pred eEEcccCCCCEEEEEEc-cCCCcEEEEEEC
Q psy4510 404 VATFKHHTAPVTTVEWH-PTESSTFASGGA 432 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~ 432 (812)
+..+..+...+++++|. |++..++++...
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 78887777789999998 776545555543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.8e-10 Score=119.69 Aligned_cols=239 Identities=12% Similarity=0.016 Sum_probs=164.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC--ceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~ 254 (812)
+....++|+| +++++++...++.|++||..++.. ...... ..... ++|+++++.|++++.++ .|.+++...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~----~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKV----TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEE----EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEE----EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 5688999999 999888888889999999987542 112222 22233 99999999998888765 688888765
Q ss_pred CCCCCCCCCCceEE----cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE--EEEEEc
Q psy4510 255 GKGPGIPTPPLFSF----SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV--EDLQWS 328 (812)
Q Consensus 255 ~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v--~~~~~~ 328 (812)
+ .....+ ..+...+.+++++|++ +.|+.+..++.|+.|++.++...........++...- ..++|+
T Consensus 204 ~-------~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 204 G-------WAPTRIGQLGSTFSGKIGAVALDETE-EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp T-------TCEEEEEECCTTSCSCCCBCEECTTS-SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred C-------ceeEEeeeccchhcCCcEEEEEeCCC-CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 3 222233 2244667899999965 4555577788999999987652111000122222222 399999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC---------------CCCeEEEEEcCCCCEEEEEe-CCCcEEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH---------------TSDVNVISWNRTEPLIVSGG-DDGCIHV 392 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------~~~v~~l~~~~~~~~l~sg~-~dg~i~i 392 (812)
|++..++++-..++.|+.|+.... +..+ .++ -.....++++++|+++++-. .++.|+.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~-~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGE-----CEWF-CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC-----EEEE-EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEecCCC-----EEEE-EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 976667888888899999987631 1111 111 23478999999999888877 8899999
Q ss_pred EecCCCCCCCceEEcccC---------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 393 WDLRRFKKGSSVATFKHH---------------TAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
|++.. + .+.++.++ -.....|+++|++ .++++-..+++|+.+++
T Consensus 350 ~~~~~---G-~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILD---G-YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTT---T-EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEE
T ss_pred EECCC---C-EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEe
Confidence 99752 2 34444443 2357899999985 67777777888888765
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.5e-10 Score=118.38 Aligned_cols=237 Identities=8% Similarity=-0.104 Sum_probs=156.8
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
.....+++. ++++.++...++.|.+||..+++. ...+. .......++++++++..++...++.|.+||..++
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~----~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~- 115 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKE----VGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY- 115 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCE----EEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT-
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEE----EEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC-
Confidence 335566663 456666667789999999998873 33332 3467889999999854444447899999999875
Q ss_pred CCCCCCCCceEEcCCC-----CcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 257 GPGIPTPPLFSFSGHL-----TEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~-----~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
+....+.... .....+++ ++ +.|..++ .++.|.++|+.++.. ...+.. ......++++|
T Consensus 116 ------~~~~~i~~g~~~~~~~~p~~i~~--~~-~~lyv~~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~ 181 (328)
T 3dsm_A 116 ------EITGYIECPDMDMESGSTEQMVQ--YG-KYVYVNCWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDK 181 (328)
T ss_dssp ------EEEEEEECTTCCTTTCBCCCEEE--ET-TEEEEEECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECT
T ss_pred ------eEEEEEEcCCccccCCCcceEEE--EC-CEEEEEcCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcC
Confidence 3333443222 14556777 34 4444444 488999999988752 222221 23457889999
Q ss_pred CCCeEEEEEECC----------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 330 GEKRVLASCSVD----------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 330 ~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
+++ +++++..+ +.|.++|..+.. ....+........+.++|+|++++|+++.. .|.+||....+
T Consensus 182 dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 182 YNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp TSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSS
T ss_pred CCC-EEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCc
Confidence 998 56666554 789999987532 222331222346899999999998877655 89999997422
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEE----ECCCCEEEEEcC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASG----GADDQIALWDLA 442 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~----~~dg~v~iwd~~ 442 (812)
.. ....+..+......++++|++..++++. ..++.|.+||..
T Consensus 256 ~~-~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 256 VP-VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CC-SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ee-eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 11 0111122245788999999766777776 668899999987
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-11 Score=125.58 Aligned_cols=178 Identities=7% Similarity=-0.012 Sum_probs=131.7
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccc------ccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ------VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
++..+++++ ...++++|+.+ .+++|++....... ........+.. |++|+| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 578899999 99999999987 56679865432100 01112234566 999999 89999998 889999999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
+.+. ........|...+.++.+.+. .+++++.||.|.+||+.++.. .. +...|+|++|+|+|
T Consensus 113 v~sl-------~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~----~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 113 LEEL-------SEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKST----KQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp SSST-------TCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCE----EE----EEESEEEEEECSSE
T ss_pred chhh-------hccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcc----cc----ccCCceEEEEcCCc
Confidence 9874 344556677888988888764 388889999999999997762 11 45689999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecC--------CcCCCCeEEEEEcCCCCEEEE
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLP--------NAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~~~~v~~l~~~~~~~~l~s 383 (812)
++.|..||++++|+....... ...++. .+|...|.+|+|.+++.++++
T Consensus 175 ---~~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---eEEEEcCCcEEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 577999999999988643210 011221 147788999999998887765
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.27 E-value=6.6e-11 Score=122.93 Aligned_cols=177 Identities=11% Similarity=0.043 Sum_probs=129.5
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC-----CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-----GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
+++.+++++...++++|+.++ +++|+++... ... ...+.... .+.+ |+.|+| ++ ..|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~-~~~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST-PLTFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC-CCCCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc-cccceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEEE
Confidence 689999999999999998875 5559865421 000 02333333 3666 999999 66 788888 7899999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
||+.+... ......|...+.++.+.+. + +++++.||.|.+||+..... . . +...|+|++|+|+|
T Consensus 111 ~dv~sl~~----~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~---~-~----~~~~Vs~v~WSpkG- 174 (388)
T 1xip_A 111 LDLEELSE----FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST---K-Q----LAQNVTSFDVTNSQ- 174 (388)
T ss_dssp EESSSTTC----EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE---E-E----EEESEEEEEECSSE-
T ss_pred EEchhhhc----cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc---c-c----ccCCceEEEEcCCc-
Confidence 99987762 3344556778888888765 2 88899999999999984332 1 1 34689999999999
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCc--eEEc------c---cCCCCEEEEEEccCCCcEEEEE
Q psy4510 380 LIVSGGDDGCIHVWDLRRFKKGSS--VATF------K---HHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 380 ~l~sg~~dg~i~iwd~~~~~~~~~--~~~~------~---~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
++.|..||.+++|+... ... ..++ . +|...|.+|.|.+++ .++++-
T Consensus 175 -~~vg~~dg~i~~~~~~~---~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 175 -LAVLLKDRSFQSFAWRN---GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp -EEEEETTSCEEEEEEET---TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred -eEEEEcCCcEEEEcCCC---ccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 78899999999998863 221 3344 2 378899999999975 455543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-09 Score=113.54 Aligned_cols=252 Identities=12% Similarity=0.030 Sum_probs=161.7
Q ss_pred CCCcEEEEccCCCCccccccccc--CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPL--GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l--~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~ 274 (812)
.++.|.+||..+++......... .........+++. .++..++...++.|.+||..++ +.+.++. ....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~-------~~~~~i~-~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF-------KEVGRIT-GFTS 85 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC-------CEEEEEE-CCSS
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc-------EEEEEcC-CCCC
Confidence 47899999998876321111100 1122345677774 4555566667899999999885 5666664 3467
Q ss_pred EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEE-CCCeEEEEE
Q psy4510 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCS-VDLSIRIWD 348 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd 348 (812)
...+++++++ .++++...++.|.+||+.+... ...+.. .......+++ ++..++++.. .++.|.++|
T Consensus 86 p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~----~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 86 PRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEI----TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp EEEEEEEETT-EEEEEEBSCSEEEEEETTTTEE----EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEE
T ss_pred CcEEEEeCCC-eEEEEECCCCeEEEEECCCCeE----EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEE
Confidence 8899999987 5555554789999999987752 222211 1124566777 4554566654 489999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEecCCCCCCCceEEcccC-CCCEEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD----------GCIHVWDLRRFKKGSSVATFKHH-TAPVTTV 417 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----------g~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v 417 (812)
+.+.. .+..+.. ......++++|+|++++++..+ +.|.++|..+ .+....+... ......+
T Consensus 159 ~~t~~---~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 159 TETDK---VVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKLGDWPSEV 230 (328)
T ss_dssp TTTTE---EEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCTTCCCEEE
T ss_pred CCCCe---EEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCCCCCceeE
Confidence 98543 2333311 2345678999999877766554 7899999873 4444454422 2367899
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
+|+|++. .|.++.. .|.+||..+.+.. ...+...+......++++|+...++++.
T Consensus 231 a~~~d~~-~lyv~~~--~v~~~d~~t~~~~--------------~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 231 QLNGTRD-TLYWINN--DIWRMPVEADRVP--------------VRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EECTTSC-EEEEESS--SEEEEETTCSSCC--------------SSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEecCCC-EEEEEcc--EEEEEECCCCcee--------------eeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 9999875 5555543 8999999876421 0001111134678899999776777776
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.26 E-value=3.2e-09 Score=109.35 Aligned_cols=164 Identities=7% Similarity=0.051 Sum_probs=101.7
Q ss_pred cCCCCcEEEEEecCCCCCEEEE-------EeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-CCeEEEEEEC
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLAT-------GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG-EKRVLASCSV 340 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~s-------g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~ 340 (812)
...-....+++|++++ .++++ +..++.|.+|+..++...........++...+.+++++++ +. ++++ +.
T Consensus 14 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~-~~ 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVA-DM 90 (314)
T ss_dssp ECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEE-ET
T ss_pred hccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEE-EC
Confidence 3344556799999887 67776 5667899999987765211111001124467899999999 65 4444 44
Q ss_pred CCeEEEEECCCCCcccce-eecC-CcCCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEecCCCCCCCc
Q psy4510 341 DLSIRIWDTRVINTKSCM-LTLP-NAHTSDVNVISWNRTEPLIVSGGDD---------------GCIHVWDLRRFKKGSS 403 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~-~~~~-~~~~~~v~~l~~~~~~~~l~sg~~d---------------g~i~iwd~~~~~~~~~ 403 (812)
.+.|.+||.. +.. ..+ .... ......+++++++++|+++++...+ +.|..||.. ++
T Consensus 91 ~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~- 163 (314)
T 1pjx_A 91 RLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQ- 163 (314)
T ss_dssp TTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SC-
T ss_pred CCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC----CC-
Confidence 4579999986 322 111 1110 1123458899999999877776654 456666653 22
Q ss_pred eEEcccCCCCEEEEEEc----cCCCcEEEEEECCCCEEEEEcC
Q psy4510 404 VATFKHHTAPVTTVEWH----PTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~----p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
+..+..+......++|+ |++..++++...++.|.+||+.
T Consensus 164 ~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 164 MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 22232334456888999 8864344554567788888864
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-09 Score=111.39 Aligned_cols=226 Identities=9% Similarity=0.001 Sum_probs=148.3
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
....+|+|..+.++++...++.|.+|+..++... .+ .+...+.+++|+++++++++. . ..|.+|+..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----~~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g--- 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-----VH-ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATG--- 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-----EE-ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTC---
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-----EE-ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCC---
Confidence 4568899944667778878899999998775421 11 124579999999999877765 3 34889998764
Q ss_pred CCCCCCceEEcC----C-CCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 259 GIPTPPLFSFSG----H-LTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 259 ~~~~~~~~~~~~----h-~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
+ +..+.. . ...+..++++|+| .++++... .+.|..++ ++. ...+..+....+.++|
T Consensus 120 ----~-~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~-----~~~~~~~~~~~~~i~~ 186 (326)
T 2ghs_A 120 ----V-LTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGK-----VTKLFADISIPNSICF 186 (326)
T ss_dssp ----C-EEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTE-----EEEEEEEESSEEEEEE
T ss_pred ----c-EEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCc-----EEEeeCCCcccCCeEE
Confidence 2 222221 1 2358899999998 55554432 23455555 332 1122223345789999
Q ss_pred cCCCCeEEEEEECCCeEEEEECC--CC-Ccc--cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR--VI-NTK--SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+|+++.++++.+.++.|.+||+. ++ ... ..+..+ .........+++.++|+++++...++.|.+||.. ++
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~-~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~----g~ 261 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD----GN 261 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT----CC
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC-CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC----CC
Confidence 99998666666678899999985 32 111 112222 2234557889999999877777677889999983 45
Q ss_pred ceEEcccCCCCEEEEEEc-cCCCcEEEEEECC
Q psy4510 403 SVATFKHHTAPVTTVEWH-PTESSTFASGGAD 433 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~d 433 (812)
.+..+..+...+++++|. |++..++++...+
T Consensus 262 ~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 262 HIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 666676667779999998 7765444444443
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.24 E-value=6.1e-10 Score=129.47 Aligned_cols=275 Identities=9% Similarity=-0.060 Sum_probs=159.8
Q ss_pred CCCCCCeEEEecCCC---cEEEEccCC----CCcccccc---cccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEE
Q psy4510 185 SSTEPGVLATGDCKR---NIHIWTPRE----AGAWQVDQ---KPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAE 249 (812)
Q Consensus 185 sp~~~~~lat~~~dg---~v~iwd~~~----~~~~~~~~---~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~v 249 (812)
+| +|++++....++ .-.||.... +....... ....+|...+..++|||||++|+.++.+ ..|++
T Consensus 115 ~p-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QR-RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EE-ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EE-ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 37 888877554333 255665442 22111110 1223455578899999999999887643 45999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc--------------EEEEeCCCCCcceeccccc
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--------------IHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~--------------i~vwd~~~~~~~~~~~~~~ 315 (812)
||+.++ +.+. ...+...+..++|+|+ . .|+.++.++. |++|++.++..........
T Consensus 194 ~dl~tg-------~~~~-~~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 194 VGVADG-------KPLA-DELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp EETTTC-------CEEE-EEEEEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EECCCC-------CCCC-ccCCCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 999986 2222 2112222357899999 4 4555444443 8999987664211122222
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC----C
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD----D 387 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~----d 387 (812)
..+...+..+.|+|+|+.+++++.. ...|++||+.++.. .+...+ ..+...+.... +|+|..|+..+. +
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l-~~~~~~~~~~~-~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVTAL-IPDLKAQWDFV-DGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCEEE-ECSSSSCEEEE-EEETTEEEEEECTTCTT
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccEEe-cCCCCceEEEE-eccCCEEEEEECCCCCC
Confidence 3344468899999999964444432 34899999875311 112333 22333444443 488887777665 3
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (812)
+.|.+||+.... ......+..+...+..+.|. +..++++...|+..++|.+..... ......
T Consensus 341 ~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~---------------~~~~l~ 402 (741)
T 1yr2_A 341 KKIVRVDLSGST-PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGK---------------PAGAVS 402 (741)
T ss_dssp CEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSC---------------EEEECB
T ss_pred CEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC---------------ceeecc
Confidence 459999987421 22233344455556678887 346888888899887776642210 111111
Q ss_pred c-CCCceeEEEEcCCCCCEEEEEeC
Q psy4510 468 L-GQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 468 ~-~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
. ....+..+.++|+++.++++.++
T Consensus 403 ~~~~~~v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 403 LPGIGSASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp CSSSCEEEEEECCBTCSCEEEEEEE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcC
Confidence 1 23467888999988767666554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=7e-10 Score=127.66 Aligned_cols=247 Identities=11% Similarity=0.056 Sum_probs=159.6
Q ss_pred CCCCceEEEEeCCCCCCeEEE-----ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC---
Q psy4510 174 GHLTEGFAMDWSSTEPGVLAT-----GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--- 245 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat-----~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--- 245 (812)
+|...+..++||| +|++||- |+....|+|||+.+++.... .+ +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET---PL--KDVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EE--EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc---cc--CCceeccEEEe-CCCEEEEEEecCccc
Confidence 4556788999999 9999983 44446899999998863211 11 11123678999 999999888764
Q ss_pred ----------ceEEeeCCCCCCCCCCCC--CceEEcC-CCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcce
Q psy4510 246 ----------QLAEHNKKRGKGPGIPTP--PLFSFSG-HLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQ 309 (812)
Q Consensus 246 ----------~i~vwd~~~~~~~~~~~~--~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~ 309 (812)
.|++|++.++ ... .+..... |...+.++.|+|++..++++.+. ...|+++++.++..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~-----~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-- 271 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTA-----QEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-- 271 (693)
T ss_dssp ------CCCCEEEEEETTSC-----GGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--
T ss_pred ccccccCCCcEEEEEECCCC-----cccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--
Confidence 3888998774 112 2222233 44567899999999544555543 35899999987642
Q ss_pred eccccccCCCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 310 VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 310 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
....+..+....... |++++..+++....+ +.|..+|+...... ....+ ..|...+. .|+++++.|+....
T Consensus 272 -~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~~~l-~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 272 -PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HWRDL-IPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp -CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEE-ECCCSSCE--EEEEETTEEEEEEE
T ss_pred -ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-ccEEE-ecCCCCEE--EEEEECCEEEEEEE
Confidence 133444555555554 677777666666554 68999999854321 12233 33444454 88888886665554
Q ss_pred -CC--cEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 387 -DG--CIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 387 -dg--~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
+| .|++||+. +.....+. ...+.+..+.++|++..++++.+. -++|..||+.+.
T Consensus 346 ~~g~~~l~~~d~~----g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 346 VDATARVEQFDYE----GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp ETTEEEEEEECTT----SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred ECCeeEEEEEECC----CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 44 68888885 33344443 234567788888887666665543 267889998765
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.9e-08 Score=101.31 Aligned_cols=271 Identities=9% Similarity=-0.010 Sum_probs=174.1
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.....+.++++.++++..++...++.|.+|+.. +. .. ...+..+...+.++++.+++ .++++...++.|..+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~-----~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR-----IK-EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKL 88 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-----EE-EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc-----eE-EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEE
Confidence 345678899999999987777778999999977 31 11 12223344678999999988 677766667889999
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
|.. +.. ...........+.++++.+++. ++++...++.|..+|.. +.. . ...+ ......+..+++.+++++
T Consensus 89 d~~-g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~-~-~~~~-~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 89 SKK-GGF---TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTI-Y-EYDL-PNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp CTT-SCE---EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCE-E-EEEC-SSTTCCEEEEEECTTSSE
T ss_pred CCC-CCe---EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCE-E-EccC-CCCCCCceeEEECCCCCE
Confidence 987 432 1122222346789999999887 67766668899999976 221 1 1222 224567899999999997
Q ss_pred EEEEeCCCcEEEEecCCCCCCCce-EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
+++...++.|..+|.. +... .....+...+.++++.+++ .++++....+.|.+||.. ...
T Consensus 160 ~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~------------- 220 (300)
T 2qc5_A 160 WFTENQNNSIGRITNT----GKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTT-GEI------------- 220 (300)
T ss_dssp EEEETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTT-CCE-------------
T ss_pred EEEecCCCeEEEECCC----CcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCC-CcE-------------
Confidence 7777667889999983 2222 2223345678999999986 566665556789999973 211
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
...........+..+++++++. +.++... +++..|.. . ..............+.++++.++ +.+..+.
T Consensus 221 --~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~ 289 (300)
T 2qc5_A 221 --SEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN-D-NTIQEYQLQTENAEPHGITFGKD--GSVWFAL 289 (300)
T ss_dssp --EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT-T-SCEEEEECCSTTCCCCCEEECTT--SCEEEEC
T ss_pred --EEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC-C-CcEEEEECCccCCccceeEeCCC--CCEEEEc
Confidence 1111112234688999999864 5555543 45556554 2 22221212223456788888888 4444443
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2e-06 Score=100.80 Aligned_cols=482 Identities=9% Similarity=0.076 Sum_probs=260.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+.|+++.-.+ +|. |-.|+.+| +..||-..-+...... ..-.-....|.+|...++|...+ ++. +.+..||..+.
T Consensus 43 n~v~~I~qD~-~G~-lWigT~~G-L~ryDG~~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWi-gT~-~Gl~~yd~~~~ 117 (795)
T 4a2l_A 43 STVFSIDQDK-RGN-MWFATYDG-VNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWI-GTR-DGLSRYDEEKD 117 (795)
T ss_dssp SCEEEEEECT-TSC-EEEEETTE-EEEECSSCEEEECCCTTCTTSCSCSCEEEEEECTTSCEEE-EES-SCEEEEETTTT
T ss_pred ceeEEEEEcC-CCC-EEEeecCc-CcccCCCceEEEeCCCCCCCcccccceeEEEECCCCCEEE-EeC-CchheeCCCCC
Confidence 6799998777 554 44555566 5666643211000000 00011245799999988887555 444 44788987653
Q ss_pred CCCCCCCCCceEEcCCCC----cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC-CCC-EEEEEEcC
Q psy4510 256 KGPGIPTPPLFSFSGHLT----EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNS-VEDLQWSP 329 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~----~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~-v~~~~~~p 329 (812)
....+..... .|.++...+++ .|..++. +.|..|+..+... .....++ ... |.++...+
T Consensus 118 --------~f~~~~~~~~~~~~~i~~i~~d~~g--~lwi~t~-~gl~~~~~~~~~~----~~~~~~~~~~~~i~~i~~d~ 182 (795)
T 4a2l_A 118 --------IFQNFFYEKNGKHLQVNGIEEISPE--QLLISTP-EGLIMFDIKESKF----IDDSFSTAMHKTIASTLYRQ 182 (795)
T ss_dssp --------EEEEECCEETTEECCCCEEEEEETT--EEEEEET-TEEEEEETTTTEE----ECSSSCHHHHTCCEEEEEEE
T ss_pred --------eEEeccccccCCCceEEEEEECCCC--CEEEEEC-CceEEEECCCCEE----EeccCCCCCCcceEEEEECC
Confidence 2222322111 17788887776 3444444 5588999766431 1100111 113 88888888
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
++. |..++.++.|..|+..... ...+ .......|.++...+++.+. .|+.++-|.+||... ..+..+.
T Consensus 183 ~g~--lwigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~----~~~~~~~ 251 (795)
T 4a2l_A 183 GDQ--IYIGTSTDGLYTYSITQKT----FEKVIPILGTKQIQAILQQSPTRIW-VATEGAGLFLINPKT----KEIKNYL 251 (795)
T ss_dssp TTE--EEEEESSSCEEEEETTTCC----EEECC----CCCEEEEEEEETTEEE-EEEBSSCEEEEETTT----TEEEEEC
T ss_pred CCC--EEEEECCCCEEEEeCCCCe----EEEecCCCCCCeeEEEEEcCCCCEE-EEECCCCeEEEeCCC----CeEEEee
Confidence 775 4446665568889976432 1111 12235678888888777644 455444488999753 2222222
Q ss_pred c--------CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee--------cCCCc
Q psy4510 409 H--------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH--------LGQKE 472 (812)
Q Consensus 409 ~--------h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 472 (812)
. ....|.++...+++. |..|+.+ -|.+||..... ..... .....
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~ 311 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDS-----------------FASYSSNPVENGSLSQRS 311 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSC--EEEEESS-CEEEEETTTTE-----------------EEEECCCTTSTTSCSSSC
T ss_pred cCCCCccccCCCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCe-----------------EEEEecCCCCCCCCCCCc
Confidence 1 135699999888763 5555555 58999976552 11111 11246
Q ss_pred eeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe-----ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecc
Q psy4510 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI-----HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMS 547 (812)
Q Consensus 473 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~ 547 (812)
|.++...+++ .+.+++..+|+..+........ .... ......|.++...+++ .+.+++...+...+. ..
T Consensus 312 i~~i~~D~~g-~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g-~lWiGt~~~Gl~~~~---~~ 385 (795)
T 4a2l_A 312 VRSIFMDSQG-GMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK-NLWIGTNDGGLNLYN---PI 385 (795)
T ss_dssp EEEEEECTTS-CEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTS-CEEEEESSSCEEEEC---TT
T ss_pred EEEEEEeCCc-CEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCC-CEEEEECCCCeEEEc---CC
Confidence 8899888886 4666666678877754322111 1100 0123468888887763 344554444433221 10
Q ss_pred cCcccccccccccccccCCCCCCccccCCCccceEE-ecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccC
Q psy4510 548 NLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYF-IRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD 626 (812)
Q Consensus 548 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~ 626 (812)
. .. ...... .. .... .-....|.+++..++|..|.+| +.++.|.+|+..++....
T Consensus 386 ~---~~----~~~~~~------------~~--~~~~~~l~~~~v~~i~~d~~g~~lWig--t~~~Gl~~~d~~~~~~~~- 441 (795)
T 4a2l_A 386 T---QR----FTSYTL------------QE--DESARGIGSNNIKAVYVDEKKSLVYIG--THAGGLSILHRNSGQVEN- 441 (795)
T ss_dssp T---CC----EEEECC------------C--------CCSCSCEEEEEEETTTTEEEEE--ETTTEEEEEETTTCCEEE-
T ss_pred C---Cc----EEEEec------------CC--CCcccCCCCccEEEEEEcCCCCEEEEE--eCcCceeEEeCCCCcEEE-
Confidence 0 00 000000 00 0000 0113468888888888745555 456779999987654110
Q ss_pred CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------
Q psy4510 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--------------- 691 (812)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~--------------- 691 (812)
.... .. ..+...|.++...+ ++.+.+... . -|.+|+..+++.
T Consensus 442 -------~~~~---------~~----~l~~~~v~~i~~d~-~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 442 -------FNQR---------NS----QLVNENVYAILPDG-EGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp -------ECTT---------TS----CCSCSCEEEEEECS-SSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred -------eecC---------CC----CcCCCeeEEEEECC-CCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCc
Confidence 0000 00 01345789999888 666555443 3 477788765322
Q ss_pred -eEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccc---ccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 692 -WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQ---KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 692 -~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~---~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+..++..++|++.+... +.|..|+..++.. . .. ..-..+...|.+|...++|. +.++.. . -|..||.+.
T Consensus 499 ~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~-~-Gl~~~d~~~ 571 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEASNGI-IWVGTR-E-GFYCFNEKD 571 (795)
T ss_dssp CEEEEEECTTCCEEEEES--SCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEECTTSC-EEEEES-S-CEEEEETTT
T ss_pred eEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEECCCCC-EEEEeC-C-CceeECCCC
Confidence 23344566776555443 5588888766531 1 10 00012345799999999998 555444 2 566777654
Q ss_pred cc
Q psy4510 768 ML 769 (812)
Q Consensus 768 ~~ 769 (812)
..
T Consensus 572 ~~ 573 (795)
T 4a2l_A 572 KQ 573 (795)
T ss_dssp TE
T ss_pred Cc
Confidence 43
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-08 Score=105.12 Aligned_cols=274 Identities=7% Similarity=-0.043 Sum_probs=164.7
Q ss_pred eCCCCCCeEEEecC--CC---cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceE
Q psy4510 184 WSSTEPGVLATGDC--KR---NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLA 248 (812)
Q Consensus 184 ~sp~~~~~lat~~~--dg---~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~ 248 (812)
..| +++++.++.. .+ +|.+||..+++. ...+..-..+ .++++||+++|+.+. .++.|.
T Consensus 28 ~~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~----~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 28 PGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSI----LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CCC-CCCEEEEeCCcccCCccEEEEEECCCCeE----EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 345 6776666542 22 889999988763 3334433334 999999999998886 367899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceecccc-ccCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKP-LVGH 318 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~-~~~h 318 (812)
++|..+. +.+.++.-. ......++|+|++ ++|+++.. ++.|.++| .+++ .... +. .
T Consensus 101 viD~~t~-------~~~~~i~~~~~~~~~~g~~p~~~~~spDG-~~l~v~n~~~~~~v~viD-~t~~----~~~~~i~-~ 166 (373)
T 2mad_H 101 VFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQFAAGPAVGLVV-QGGS----SDDQLLS-S 166 (373)
T ss_pred EEECCCC-------cEEEEEECCCccccccCCCccceEECCCC-CEEEEEecCCCCeEEEEE-CCCC----EEeEEcC-C
Confidence 9999874 444433211 1234589999999 66666653 57899999 7775 2222 22 1
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--ecCCcCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML--TLPNAHTSD-VNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.. ++.+.|.++..+++.+.||.+.++|. ++....... ... ....+ .....+.+++..++..+..+.+.+.|+
T Consensus 167 ~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~ 241 (373)
T 2mad_H 167 PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADI 241 (373)
T ss_pred Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEcCCceEEEEec
Confidence 11 25566777667888889999999999 543321111 010 11112 233456666654444446789999998
Q ss_pred CCCCCCCceEEccc----------CCCCEEEEEEccCCCcEEEEEE---------CCCCEEEEEcCCCCchhHHHhhhhh
Q psy4510 396 RRFKKGSSVATFKH----------HTAPVTTVEWHPTESSTFASGG---------ADDQIALWDLAVERDSEIEQREAEL 456 (812)
Q Consensus 396 ~~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~~~~~ 456 (812)
.... ...+..+.. .......+.++|++.+++++.. ..+.|.++|+.+.+
T Consensus 242 ~~~~-~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----------- 309 (373)
T 2mad_H 242 SAAG-ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----------- 309 (373)
T ss_pred cCCc-ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-----------
Confidence 6311 111222211 1123444788998764444433 13579999998873
Q ss_pred ccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe--CCCeEEEEeCC
Q psy4510 457 KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA--NSGFNIFRTIS 501 (812)
Q Consensus 457 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~--~~~~~~~~~~~ 501 (812)
.............+.|+|++..+++++. .+.+.+++..+
T Consensus 310 ------vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 310 ------TSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ------EEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 3222222336889999999874454443 45566666544
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2e-06 Score=100.79 Aligned_cols=489 Identities=9% Similarity=0.050 Sum_probs=261.5
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|.++...+ +|.+.+ |+.+| +..||..+..-........ .....|.++...+++...+.. . +.+.+|+..++
T Consensus 87 ~n~I~~i~~d~-~g~lWi-gT~~G-l~~yd~~~~~f~~~~~~~~-~~~~~i~~i~~d~~g~lwi~t-~-~gl~~~~~~~~ 160 (795)
T 4a2l_A 87 NDISRIVKTDS-QGRVWI-GTRDG-LSRYDEEKDIFQNFFYEKN-GKHLQVNGIEEISPEQLLIST-P-EGLIMFDIKES 160 (795)
T ss_dssp CSCEEEEEECT-TSCEEE-EESSC-EEEEETTTTEEEEECCEET-TEECCCCEEEEEETTEEEEEE-T-TEEEEEETTTT
T ss_pred ccceeEEEECC-CCCEEE-EeCCc-hheeCCCCCeEEecccccc-CCCceEEEEEECCCCCEEEEE-C-CceEEEECCCC
Confidence 36799998888 776554 44444 8899876543111000000 000128899888888766544 3 55888887653
Q ss_pred CCCCCCCCCceEEc-CC-CCc-EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSFS-GH-LTE-GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~~-~h-~~~-v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. ...+. ++ ... |.++...+++ .|..|..++.|..|+..+..... . ........|.++...+++.
T Consensus 161 ~--------~~~~~~~~~~~~~i~~i~~d~~g--~lwigt~~~Gl~~~~~~~~~~~~--~-~~~~~~~~i~~i~~d~~g~ 227 (795)
T 4a2l_A 161 K--------FIDDSFSTAMHKTIASTLYRQGD--QIYIGTSTDGLYTYSITQKTFEK--V-IPILGTKQIQAILQQSPTR 227 (795)
T ss_dssp E--------EECSSSCHHHHTCCEEEEEEETT--EEEEEESSSCEEEEETTTCCEEE--C-C----CCCEEEEEEEETTE
T ss_pred E--------EEeccCCCCCCcceEEEEECCCC--CEEEEECCCCEEEEeCCCCeEEE--e-cCCCCCCeeEEEEEcCCCC
Confidence 1 11111 11 112 7888887775 45556665568999987664211 1 0112345788998888776
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCC-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPN-------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
|..++.++-|.+||..+.. ...+.. -....|.++...++|.+.+ |+.+ -|.+||... ....
T Consensus 228 --lwigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~----~~~~ 295 (795)
T 4a2l_A 228 --IWVATEGAGLFLINPKTKE----IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGT----DSFA 295 (795)
T ss_dssp --EEEEEBSSCEEEEETTTTE----EEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTT----TEEE
T ss_pred --EEEEECCCCeEEEeCCCCe----EEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCC----CeEE
Confidence 4455555558889976422 111111 1245699999998887544 4445 488899753 2233
Q ss_pred Ecc--------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 406 TFK--------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 406 ~~~--------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
.+. .....|.++...++| .|..|+.++-|..|+....... .....+. ........|.++.
T Consensus 296 ~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~-------~~~~~~~---~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 296 SYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFK-------NIRNIPY---KNSLSDNVVSCIV 363 (795)
T ss_dssp EECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSE-------EECCCTT---SSSCSCSSEEEEE
T ss_pred EEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccce-------EEcCCCC---CCCCCCCeeEEEE
Confidence 332 123579999998876 3667777777999986544210 0000000 0001134688888
Q ss_pred EcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe------ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcc
Q psy4510 478 WHPQLPGTIISTANSGFNIFRTISDLPSQLLFI------HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTS 551 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~ 551 (812)
..+++ .+.+++..+|+..|............. ......|.++...+++..+.+++...+...+ ....
T Consensus 364 ~d~~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~---d~~~--- 436 (795)
T 4a2l_A 364 EDKDK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSIL---HRNS--- 436 (795)
T ss_dssp ECTTS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEE---ETTT---
T ss_pred ECCCC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEE---eCCC---
Confidence 88875 466666666887776443221111100 0123568888887763114555544432222 1110
Q ss_pred cccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccc
Q psy4510 552 TEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQL 631 (812)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~ 631 (812)
+. .... . ...+ ......|.++...++|...+.. . +.|.+|+..++.-..
T Consensus 437 ~~----~~~~--~---------~~~~------~l~~~~v~~i~~d~~g~lwigt---~-~Gl~~~~~~~~~~~~------ 485 (795)
T 4a2l_A 437 GQ----VENF--N---------QRNS------QLVNENVYAILPDGEGNLWLGT---L-SALVRFNPEQRSFTT------ 485 (795)
T ss_dssp CC----EEEE--C---------TTTS------CCSCSCEEEEEECSSSCEEEEE---S-SCEEEEETTTTEEEE------
T ss_pred Cc----EEEe--e---------cCCC------CcCCCeeEEEEECCCCCEEEEe---c-CceeEEeCCCCeEEE------
Confidence 00 0000 0 0000 0123468888888888755543 3 458888877653110
Q ss_pred cccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------eEEEE
Q psy4510 632 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------------WSVYL 696 (812)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------------~~~~~ 696 (812)
.... . .. -.-....|.++...+ ++.+.+... +-|..|+..++.. +..++
T Consensus 486 --~~~~-~--------~~--~~~~~~~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 549 (795)
T 4a2l_A 486 --IEKE-K--------DG--TPVVSKQITTLFRDS-HKRLWIGGE--EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIY 549 (795)
T ss_dssp --CCBC-T--------TC--CBCCCCCEEEEEECT-TCCEEEEES--SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEE
T ss_pred --cccc-c--------cc--cccCCceEEEEEECC-CCCEEEEeC--CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEE
Confidence 0000 0 00 001235789999988 666655544 4466777654332 23344
Q ss_pred ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC-CcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 697 ~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH-~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
..++|++.+... . -+..|+..+++. . ......|- ...|.++...++|. +.+++. +-|..|+.+..
T Consensus 550 ~d~~g~lWigT~-~-Gl~~~d~~~~~~-~-~~~~~~gl~~~~i~~i~~d~~g~-lWi~t~--~Gl~~~~~~~~ 615 (795)
T 4a2l_A 550 EASNGIIWVGTR-E-GFYCFNEKDKQI-K-RYNTTNGLPNNVVYGILEDSFGR-LWLSTN--RGISCFNPETE 615 (795)
T ss_dssp ECTTSCEEEEES-S-CEEEEETTTTEE-E-EECGGGTCSCSCEEEEEECTTSC-EEEEET--TEEEEEETTTT
T ss_pred ECCCCCEEEEeC-C-CceeECCCCCcE-E-EeCCCCCCchhheEEEEECCCCC-EEEEcC--CceEEEcCCCC
Confidence 566777554443 3 578888766531 1 01111222 24688999999998 566553 34555555433
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.16 E-value=9.3e-09 Score=103.18 Aligned_cols=187 Identities=10% Similarity=0.045 Sum_probs=137.8
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 311 (812)
..++.|++++.++.|.+||.+++ +.+.++..+. ..+.++.++|+| ++|+ +.++.|..||. +++ .
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG-------~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~----~ 67 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK-------EIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGR----E 67 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT-------EEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSC----E
T ss_pred CCCcEEEeeCCCCEEEEEECCCC-------eEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCC----E
Confidence 34678999999999999999886 7778887766 478899999998 6777 34678999999 555 3
Q ss_pred cccccCC-CCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecC-----CcCCCCeEEEEEcCCCCEEEEE
Q psy4510 312 QKPLVGH-TNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLP-----NAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 312 ~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~sg 384 (812)
...+..+ ...+.++.+.|+|+ ++++.+. ++.|..+|.. + +.+..+. ..+......+++.++|+++++.
T Consensus 68 ~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~-G---k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 68 LWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMK-G---EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp EEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTT-S---CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred EEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCC-C---CEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 3334333 34788999999999 5777666 7778777753 2 2222221 1122234556788999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..++.|.+||.. ++.+.++..+ ..+.++...+++ .++++++.+++|..+|..+++
T Consensus 143 ~~~~~v~~~d~~----G~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 143 FATSEVREIAPN----GQLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp TTTTEEEEECTT----SCEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCC
T ss_pred cCCCEEEEECCC----CCEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCc
Confidence 999999999984 6777777754 345667788876 588888878889999988774
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.9e-09 Score=111.27 Aligned_cols=134 Identities=8% Similarity=-0.047 Sum_probs=91.1
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCCc-
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPNA- 364 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~- 364 (812)
+.|.+.|+.+.+ ....+.--..+ .++++|+++.++++.. .++.|.++|..+... +..+...
T Consensus 99 ~~VsVID~~t~~----vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v---v~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGR----ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP---IADIELPD 169 (426)
T ss_dssp EEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE---EEEEEETT
T ss_pred CeEEEEECCCCE----EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE---EEEEECCC
Confidence 699999999876 33333322334 8999999997666653 467899999986443 3333111
Q ss_pred -----CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEE
Q psy4510 365 -----HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 365 -----~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~ 437 (812)
.......+.++|+|++++++.. ++.|.+.|+. ..+.+.++.-. .. ....|.+...+++.+.||++.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~---t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE---GKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGSLA 242 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT---TTEEEEEEECC--SE--EEEEEEETTEEEEEETTSSEE
T ss_pred ccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC---CCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCCEE
Confidence 1223457899999998888764 5789999998 45566665532 11 344566656778888899999
Q ss_pred EEEcCCC
Q psy4510 438 LWDLAVE 444 (812)
Q Consensus 438 iwd~~~~ 444 (812)
+.++...
T Consensus 243 ~V~~~~~ 249 (426)
T 3c75_H 243 RVDFADG 249 (426)
T ss_dssp EEECCTT
T ss_pred EEECCCC
Confidence 8888444
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-08 Score=103.84 Aligned_cols=233 Identities=10% Similarity=0.075 Sum_probs=148.2
Q ss_pred CeeeeeEcCCCCcE-EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 225 SAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 225 ~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
--.+..|++++..| .+....+.|..|+..++ ....+ .....+.++++++++ .++++ . ++.|.+||..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~--------~~~~~-~~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~ 81 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK--------QVQRV-TMDAPVSSVALRQSG-GYVAT-I-GTKFCALNWK 81 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTC--------CEEEE-ECSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETT
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCC--------cEEEE-eCCCceEEEEECCCC-CEEEE-E-CCeEEEEECC
Confidence 44577888865544 55556889999998874 22233 245679999999998 55444 4 5689999988
Q ss_pred CCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECC---------CeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 304 EAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVD---------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 304 ~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
++..... ..... .....+++++++|+|+ ++++.... ..-.||.+..... +..+ ..+....+.++
T Consensus 82 ~g~~~~~-~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~-~~~~~~pngi~ 155 (297)
T 3g4e_A 82 EQSAVVL-ATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKY-FDQVDISNGLD 155 (297)
T ss_dssp TTEEEEE-EECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEE-EEEESBEEEEE
T ss_pred CCcEEEE-EecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC---EEEE-eeccccccceE
Confidence 7642111 11111 1234589999999998 55544321 2345555542211 1112 22334568999
Q ss_pred EcCCCCEE-EEEeCCCcEEEEecCCCCCCC-----ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 374 WNRTEPLI-VSGGDDGCIHVWDLRRFKKGS-----SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 374 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
|+|+++.| ++.+.++.|.+|++... .+. .+..+..+.+....+++.++| ++.++....+.|..||..+++
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~-~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~-- 231 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQ-TGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGK-- 231 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTT-TCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCC--
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCC-CCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCce--
Confidence 99999855 55666789999997410 222 223334444667899999987 577777777889999988663
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSG 493 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~ 493 (812)
.+.........+++++|. |+...++++++..+
T Consensus 232 --------------~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 232 --------------RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp --------------EEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred --------------EEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 222333334578999998 78777778777654
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.5e-05 Score=89.02 Aligned_cols=494 Identities=10% Similarity=-0.023 Sum_probs=259.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC---CCCCCeeeeeEcC--CCCcEEEeeCCCceEEee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG---GHTNSAEDLQWSD--LKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~s~--~~~~l~s~~~d~~i~vwd 251 (812)
+.|.++...+ +++.|..|+.++-+..||..+..-......... -....|.++.... ++.. -.+...+.+..++
T Consensus 66 n~I~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~l-wi~t~~~gl~~~~ 143 (781)
T 3v9f_A 66 NELNEVYTDP-VQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGL-WVCTYYRGIEYLD 143 (781)
T ss_dssp SCEEEEEECS-SSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEE-EEEESSSCEEEEE
T ss_pred cccceEEEcC-CCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCE-EEEECCCCeeEEE
Confidence 5688998777 777355566664699999876542111000001 1124688888877 6654 4455455677888
Q ss_pred CCCCCCCCCCCCCceEEcC------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc---ccCCCCCE
Q psy4510 252 KKRGKGPGIPTPPLFSFSG------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSV 322 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~---~~~h~~~v 322 (812)
..++ ....+.. ....|.++...+++ .|..|..++-|..|+..+.......... ..-....|
T Consensus 144 ~~~~--------~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i 213 (781)
T 3v9f_A 144 IATG--------KFTHYNKSTVPALPSEQTWTATEAEDG--KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDV 213 (781)
T ss_dssp TTTT--------EEEEESTTTCTTCSCCCEEEEEEEETT--EEEEEETTTEEEEEETTTTEEEEECC--------CCSSE
T ss_pred CCCC--------eEEeeccCcccCCCccceEEEEECCCC--CEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCce
Confidence 7653 1222211 12457888877765 5555666656889998765311100000 00123569
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.++...+++. |..|+.. -|.+||..+.. ...+.. .....|.++...++|. |..|+..+-|.++|.
T Consensus 214 ~~i~~d~~g~--lwigt~~-Gl~~~d~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 214 RCIYKDTNGN--IWIGTSK-GLALFNANTET----FTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDL 285 (781)
T ss_dssp EEEEECTTCC--EEEEETT-EEEEEETTTTE----EEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEET
T ss_pred eEEEEcCCCC--EEEEeCC-cHheECCCCCc----EEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECC
Confidence 9999988887 4445555 68899976422 111111 1245699999888775 555666456888988
Q ss_pred CCCCCCCceEE------------cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 396 RRFKKGSSVAT------------FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 396 ~~~~~~~~~~~------------~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
....- ..... .......|.++...+++ .|..|+.++-|..++........ ....+...
T Consensus 286 ~~~~~-~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~-------~~~~~~~~ 355 (781)
T 3v9f_A 286 QQNQF-LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWGGGINFISNAPPTFHT-------WSYSPTQM 355 (781)
T ss_dssp TCC----------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBSSCEEEECSSCCSCEE-------EC----CC
T ss_pred CCCee-eeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecCCeEEEeCCCCCccee-------eccCcccc
Confidence 63111 01111 01134579999888876 36667767779999876542100 00000000
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEE-eecCCCCeeEEEEcCCCCCeEEEeeCCCceEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLF-IHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 542 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~ 542 (812)
.........|.++...+++ .+.+++..+|+..+............ .......|.++...+++ .+.+++...+...+
T Consensus 356 ~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~- 432 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYY- 432 (781)
T ss_dssp CSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEE-
T ss_pred ccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEE-
Confidence 0000112468888888765 46666657788777643221111100 01123567788777662 34444332322111
Q ss_pred EeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 543 TISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
... ... .... ... ......|.++...++|...+.. . +.|.+|+..++.
T Consensus 433 --~~~---~~~----~~~~-------------~~~------~~~~~~v~~i~~d~~g~lwigt---~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 433 --NTR---LKK----FQII-------------ELE------KNELLDVRVFYEDKNKKIWIGT---H-AGVFVIDLASKK 480 (781)
T ss_dssp --CSS---SCE----EEEC-------------CST------TTCCCCEEEEEECTTSEEEEEE---T-TEEEEEESSSSS
T ss_pred --cCC---CCc----EEEe-------------ccC------CCCCCeEEEEEECCCCCEEEEE---C-CceEEEeCCCCe
Confidence 110 000 0000 000 1123468888888877644443 3 568888877653
Q ss_pred cccCCcccccccccccCCCCCCCCCCeeee---cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce--------
Q psy4510 623 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------- 691 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~-------- 691 (812)
-. ..... ......|.+++..+ ++.+.+.....| |..++..+++.
T Consensus 481 ~~-----------------------~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~ 535 (781)
T 3v9f_A 481 VI-----------------------HHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEG 535 (781)
T ss_dssp CC-----------------------EEECTTTSSCSCSCEEEEEECT-TCCEEEEESSSC-EEEECTTCCEEEEECTTTT
T ss_pred EE-----------------------ecccCcccccccceeEEEEEcC-CCCEEEEEcCCC-EEEEeCCCCeEEEccCCCC
Confidence 11 00000 01135789999988 665555443344 55677655322
Q ss_pred -----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC-CcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 692 -----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 692 -----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH-~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+..++..++|.+.++.. .|.|..|+..+++- . ......|- ...|.++...++|. +.+++ ..| |..++.
T Consensus 536 l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~-~~~~~~gl~~~~i~~i~~d~~g~-lW~~t-~~G-l~~~~~ 609 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-Q-VFQRKEGLPNTHIRAISEDKNGN-IWAST-NTG-ISCYIT 609 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-E-EECGGGTCSCCCCCEEEECSSSC-EEEEC-SSC-EEEEET
T ss_pred CCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-E-EccccCCCCCceEEEEEECCCCC-EEEEc-CCc-eEEEEC
Confidence 23334556777555443 66658899876642 1 11111121 23588899999998 55554 334 444444
Q ss_pred c
Q psy4510 766 R 766 (812)
Q Consensus 766 ~ 766 (812)
+
T Consensus 610 ~ 610 (781)
T 3v9f_A 610 S 610 (781)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.11 E-value=8.8e-09 Score=106.48 Aligned_cols=243 Identities=9% Similarity=-0.005 Sum_probs=153.4
Q ss_pred EEeCCCCCCeEEEec----------CCCcEEEEccCCCCcccccccccCC-----CCCCeeeeeEcCCCCcEEEeeC--C
Q psy4510 182 MDWSSTEPGVLATGD----------CKRNIHIWTPREAGAWQVDQKPLGG-----HTNSAEDLQWSDLKTALQTVDD--P 244 (812)
Q Consensus 182 ~~~sp~~~~~lat~~----------~dg~v~iwd~~~~~~~~~~~~~l~~-----h~~~V~~l~~s~~~~~l~s~~~--d 244 (812)
+++|| +|++|++++ .++.|.+||..+.+..... .+.. ....-..++|+|||++|..+.. +
T Consensus 83 va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I--~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 83 PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADI--ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE--EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEE--ECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 99999 999887765 3678999999987732211 1111 1234668999999999988763 6
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCE-
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSV- 322 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v- 322 (812)
+.|.++|..++ +.+.++.-.. . ....|.+...+++.+.||.+.+.++.......... ..+..-...+
T Consensus 160 ~~VsVID~~t~-------~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 160 PAVGVVDLEGK-------AFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 228 (386)
T ss_dssp CEEEEEETTTT-------EEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred CeEEEEECCCC-------cEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence 89999999985 5555654311 1 22335555677788889999999987633211100 1111111222
Q ss_pred EEEEEc-CCCCeEEEEEECCCeEEEEECCCCCcccceeec---------CCcCCCCeEEEEEcCCCCEEEEEeC------
Q psy4510 323 EDLQWS-PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL---------PNAHTSDVNVISWNRTEPLIVSGGD------ 386 (812)
Q Consensus 323 ~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------~~~~~~~v~~l~~~~~~~~l~sg~~------ 386 (812)
....|. ++|+ +++ .+.+|.|.+.|+..... ..+..+ ..........++++++++.++....
T Consensus 229 ~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~-~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 229 NHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp SCCEEETTTTE-EEE-EBTTSEEEEEECTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC
T ss_pred ccceeEcCCCc-EEE-EeCCCEEEEEECCCCcc-eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc
Confidence 224664 6665 333 55689999999874321 111111 0112234445777899886665532
Q ss_pred ----CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE-ECCCCEEEEEcCCCC
Q psy4510 387 ----DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG-GADDQIALWDLAVER 445 (812)
Q Consensus 387 ----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-~~dg~v~iwd~~~~~ 445 (812)
.+.|.++|+. +.+.+..+.. ...+.+|.++|++..+|+++ ..++.|.++|..+.+
T Consensus 306 hk~~~~~V~viD~~---t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 306 HKTASRFVVVLDAK---TGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TTSCEEEEEEEETT---TCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCCCEEEEEECC---CCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 2579999998 4666666653 23678999999985455554 558999999999874
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.09 E-value=6.3e-09 Score=106.64 Aligned_cols=232 Identities=11% Similarity=0.084 Sum_probs=148.9
Q ss_pred CCCceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 175 HLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
........+|+| +++ +++++..++.|..|+.. ++ ...+..+...+..++++++|+++++....+.|.+|+..
T Consensus 43 ~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~~-g~-----~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 43 QATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRED-GT-----VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CCSSEEEEEEEG-GGTEEEEEETTTTEEEEEETT-SC-----EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcCccCCeEeC-CCCEEEEEECCCCEEEEEeCC-CC-----EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 344567899999 887 77888888999999873 32 22334456678999999999966665566789999875
Q ss_pred CCCCCCCCCCCceEEcCC-----CCcEEEEEecCCCCCEEEE----EeC-------------CCcEEEEeCCCCCcceec
Q psy4510 254 RGKGPGIPTPPLFSFSGH-----LTEGFAMDWSSTEPGVLAT----GDC-------------KRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h-----~~~v~~l~~sp~~~~~l~s----g~~-------------dg~i~vwd~~~~~~~~~~ 311 (812)
+ + +..+..+ ...+..+++.|+| .++++ |.. .+.|..++..++...
T Consensus 116 -g-------~-~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--- 182 (305)
T 3dr2_A 116 -G-------Q-AHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--- 182 (305)
T ss_dssp -S-------C-EEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE---
T ss_pred -C-------C-EEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE---
Confidence 3 1 1222111 1245679999998 67775 332 245777777655421
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.+. .....+.++|+|+++. |+.+... +.|.+|++.... ......+..........+++.++|++.++ +
T Consensus 183 --~~~-~~~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~ 256 (305)
T 3dr2_A 183 --RMA-DLDHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-S 256 (305)
T ss_dssp --EEE-EESSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-C
T ss_pred --EEe-cCCCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-c
Confidence 112 3345788999999985 4444443 789999986422 11111111122344567899999985444 4
Q ss_pred CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
.+ .|.+|+.. ++.+..+..+. .+.+++|.|++ ..|..++.++ +..++
T Consensus 257 ~~-gv~~~~~~----g~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 257 GT-GVCVFDSD----GQLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC-LWMLP 303 (305)
T ss_dssp SS-EEEEECTT----SCEEEEEECSS-CCCEEEECTTS-CEEEEEETTE-EEEEE
T ss_pred CC-cEEEECCC----CCEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe-EEEEE
Confidence 44 49999984 55666666554 58899999876 4666666554 44433
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-08 Score=104.64 Aligned_cols=277 Identities=9% Similarity=-0.033 Sum_probs=164.0
Q ss_pred eCCCCCCeEEEecC-----CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceE
Q psy4510 184 WSSTEPGVLATGDC-----KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLA 248 (812)
Q Consensus 184 ~sp~~~~~lat~~~-----dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~ 248 (812)
..| +++.+.+... ++.|.+.|..+.+ ....+..-..+ .++++|+|++|..++ .++.|.
T Consensus 40 ~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~----v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 40 PAP-DARRVYVNDPAHFAAVTQQFVIDGEAGR----VIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCC-CTTEEEEEECGGGCSSEEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cCC-CCCEEEEEcCcccCCCCEEEEEECCCCe----EEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 346 7776666543 6799999998876 33344433344 399999999998775 367899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
+||..+. +.+.++.-. ......++|+|+| ++|+++.. ++.|.++|+.+.+. ...+.-.
T Consensus 113 viD~~t~-------~v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~v----v~tI~v~- 179 (386)
T 3sjl_D 113 VFDPVTL-------LPTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAF----KRMLDVP- 179 (386)
T ss_dssp EECTTTC-------CEEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEE----EEEEECC-
T ss_pred EEECCCC-------eEEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcE----EEEEECC-
Confidence 9999885 555555321 1234579999999 56666553 68999999998862 2222211
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-ecCCcCCCCeE-EEEEc-CCCCEEEEEeCCCcEEEEecC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-TLPNAHTSDVN-VISWN-RTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~v~-~l~~~-~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+ . .. ..|.+...+++.+.||.+.+.++.......... .........+. ...|. ++|++++ .+.+|.|.+.|+.
T Consensus 180 g-~-~~-~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 180 D-C-YH-IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp S-E-EE-EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECT
T ss_pred C-c-ce-eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECC
Confidence 1 1 12 235444457788889999999987522211101 01011112221 23554 5665444 5568999999996
Q ss_pred CCCCCCceEEcc----------cCCCCEEEEEEccCCCcEEEEEEC---------CCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 397 RFKKGSSVATFK----------HHTAPVTTVEWHPTESSTFASGGA---------DDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 397 ~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
... ...+..+. ...+.+..++++|++.+++++... .++|.+.|+.+.+.
T Consensus 256 ~~~-~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv----------- 323 (386)
T 3sjl_D 256 SGD-AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER----------- 323 (386)
T ss_dssp TSS-CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-----------
T ss_pred CCc-ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-----------
Confidence 311 01111111 012233357778887655554431 25799999998842
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCE-EEEEe-CCCeEEEEeCCC
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGT-IISTA-NSGFNIFRTISD 502 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~~~-~~~~~~~~~~~~ 502 (812)
+....-...+..+.+++++..+ +++.. .+.+.+++..+.
T Consensus 324 ------~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 324 ------LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp ------EEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ------EEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 2222222368899999998644 44444 344666765543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-08 Score=105.93 Aligned_cols=202 Identities=6% Similarity=-0.014 Sum_probs=133.1
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC--cEEEEe
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWT 301 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg--~i~vwd 301 (812)
.....|+|+++++++++...++.|++|+..++ .+.++........ ++|+|++ ..|++++.++ .|.+++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g--------~~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN--------KVTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT--------EEEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC--------EEEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 46789999999997777777899999999864 2233322233344 9999998 6788877765 788888
Q ss_pred CCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCe--EEEEEcCC
Q psy4510 302 PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDV--NVISWNRT 377 (812)
Q Consensus 302 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v--~~l~~~~~ 377 (812)
......... ...+ ......+.+++++|++..+++ +..++.|+.||...... ..+... ..++...- +.++|+|+
T Consensus 201 ~~~~~~~~~-~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 201 KASGWAPTR-IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp GGGTTCEEE-EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETT
T ss_pred cCCCceeEE-eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCC
Confidence 766542111 1111 214466789999996554454 67789999999874321 111000 11222222 38999995
Q ss_pred -CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC---------------CCEEEEEEccCCCcEEEEEE-CCCCEEEEE
Q psy4510 378 -EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT---------------APVTTVEWHPTESSTFASGG-ADDQIALWD 440 (812)
Q Consensus 378 -~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~---------------~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd 440 (812)
+.++++-...+.|+.|+... . +..+.++. .....++++|++ .++++-+ .+++|+.|+
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g----~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDG----E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTC----C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEecCC----C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEE
Confidence 55666667788999999752 2 33333332 347899999997 4777777 788999999
Q ss_pred cCCC
Q psy4510 441 LAVE 444 (812)
Q Consensus 441 ~~~~ 444 (812)
+...
T Consensus 352 ~~~G 355 (409)
T 3hrp_A 352 ILDG 355 (409)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7655
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.04 E-value=9.4e-08 Score=98.76 Aligned_cols=228 Identities=11% Similarity=-0.038 Sum_probs=141.0
Q ss_pred eeeeeEcCCCCc-EEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 226 AEDLQWSDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 226 V~~l~~s~~~~~-l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
..+.+|+|++.. +.+...++.|.+|+..++ ....+. ....+.+++|+|++ .++++ +. ..|.+||..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~--------~~~~~~-~~~~v~~i~~~~dg-~l~v~-~~-~gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG--------RKTVHA-LPFMGSALAKISDS-KQLIA-SD-DGLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT--------EEEEEE-CSSCEEEEEEEETT-EEEEE-ET-TEEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC--------cEEEEE-CCCcceEEEEeCCC-eEEEE-EC-CCEEEEECCC
Confidence 356788897554 455556788999998764 122232 34679999999997 55554 34 4499999877
Q ss_pred CCcceecccccc--CCCCCEEEEEEcCCCCeEEEEEEC------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 305 AGAWQVDQKPLV--GHTNSVEDLQWSPGEKRVLASCSV------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 305 ~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
+.... ..... .....+++++++|+|+ ++++... .+.|..++ .+ . +..+ ..+....+.++|+|
T Consensus 119 g~~~~--~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g-~---~~~~-~~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 119 GVLTL--HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG-K---VTKL-FADISIPNSICFSP 188 (326)
T ss_dssp CCEEE--EECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT-E---EEEE-EEEESSEEEEEECT
T ss_pred CcEEE--EeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC-c---EEEe-eCCCcccCCeEEcC
Confidence 65211 11111 1124689999999998 4554432 24555555 21 1 1222 12234578999999
Q ss_pred CCCEEE-EEeCCCcEEEEecC--CC-CC--CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 377 TEPLIV-SGGDDGCIHVWDLR--RF-KK--GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 377 ~~~~l~-sg~~dg~i~iwd~~--~~-~~--~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+++.++ +.+.++.|.+||+. .. .. .+.+..+........++++.+++ .++++...++.|.+||....
T Consensus 189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~------ 261 (326)
T 2ghs_A 189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGN------ 261 (326)
T ss_dssp TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCC------
T ss_pred CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCCC------
Confidence 998554 44567899999985 21 11 11233333344567889999987 56666656678999987422
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCC
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSG 493 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~ 493 (812)
.+.........+.+++|. +++..+++++..++
T Consensus 262 -----------~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 262 -----------HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -----------EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -----------EEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 222222333468999998 77766667666554
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-08 Score=117.54 Aligned_cols=236 Identities=12% Similarity=0.054 Sum_probs=145.6
Q ss_pred CCCCCeeeeeEcCCCCcEEEee-----CCCceEEeeCCCCCCCCCCCCCce-EEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVD-----DPFQLAEHNKKRGKGPGIPTPPLF-SFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+|...+..++|||||++||-+. ....|++||+.++ +.+. .+.+ .....++|+ ++ ..|+.++.+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg-------~~~~~~~~~--~k~~~~~Ws-Dg-~~l~y~~~~ 194 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK-------QPLETPLKD--VKFSGISWL-GN-EGFFYSSYD 194 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC-------SEEEEEEEE--EESCCCEEE-TT-TEEEEEESS
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC-------CCCccccCC--ceeccEEEe-CC-CEEEEEEec
Confidence 4667889999999999988433 3357999999986 2221 1211 112578999 98 566666665
Q ss_pred C-------------cEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccc
Q psy4510 295 R-------------NIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSC 357 (812)
Q Consensus 295 g-------------~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~ 357 (812)
. .|++|++.+............. |...+..+.|+|+++.++++.+.+ ..|+++|+..+.. .
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~ 272 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--P 272 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--C
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--c
Confidence 3 3999999876532222333333 455678999999999876766543 5899999875432 2
Q ss_pred eeecCCcCCCCeEEEEEcCCCC-EEEEEeCC---CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 358 MLTLPNAHTSDVNVISWNRTEP-LIVSGGDD---GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
...+ ..+....... |++++. +++....+ +.|.++|+..... .....+..|...+. .|++++..++++...+
T Consensus 273 ~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 273 LLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp CEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred eEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 2333 2344444444 556666 44444443 6799999974211 12345556666665 8888876555555555
Q ss_pred C--CEEEEEcCCCCchhHHHhhhhhccCCCceEEe-ecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 434 D--QIALWDLAVERDSEIEQREAELKDLPSQLLFI-HLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 434 g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
+ .|++|++.... .... ......+..+.+++++..++++.+.
T Consensus 348 g~~~l~~~d~~g~~-----------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 348 ATARVEQFDYEGKR-----------------VREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp TEEEEEEECTTSCE-----------------EEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred CeeEEEEEECCCCe-----------------eEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 5 68888887441 1111 1122346667777777766666554
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.6e-05 Score=91.03 Aligned_cols=489 Identities=9% Similarity=-0.048 Sum_probs=256.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+.|.++.....+...|..++.++-|..|+..+............ .....|.++...+++...+ +...+.+..++..++
T Consensus 115 ~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~ 193 (781)
T 3v9f_A 115 NDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDK 193 (781)
T ss_dssp SCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTT
T ss_pred CcceEEEecCccCCCEEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCC
Confidence 45777765431134555565445588888765432111000000 1234688888877776555 555545788887653
Q ss_pred CCCCCCCCCceEEc--------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc---ccCCCCCEEE
Q psy4510 256 KGPGIPTPPLFSFS--------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVED 324 (812)
Q Consensus 256 ~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~---~~~h~~~v~~ 324 (812)
....+. -....|.++...+++ . |..|... -|.+||..+.......... ..-....|.+
T Consensus 194 --------~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~ 262 (781)
T 3v9f_A 194 --------SVKHFVHDPQNPNSLPGNDVRCIYKDTNG-N-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFS 262 (781)
T ss_dssp --------EEEEECC--------CCSSEEEEEECTTC-C-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEE
T ss_pred --------ceEeeecCCCCcccCCCCceeEEEEcCCC-C-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEE
Confidence 111111 113568888888776 3 4445544 6889998765311000000 0112457999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-------e---cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-------T---LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~---~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd 394 (812)
+...+++. |..|+..+-|.++|........... . ........|.++...++|. |..|+.++-|..++
T Consensus 263 i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~ 339 (781)
T 3v9f_A 263 IKQLKDNK--LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFIS 339 (781)
T ss_dssp EEECTTSE--EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEEC
T ss_pred EEECCCCC--EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeC
Confidence 99988886 5667765678888886432111000 0 0012356799999988886 45566667788998
Q ss_pred cCCCCCCCceEEcc----------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 395 LRRFKKGSSVATFK----------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 395 ~~~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
... .....+. .....|.++...+++ .|..|+.++-|..||..+.... .....
T Consensus 340 ~~~----~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~----------~~~~~-- 401 (781)
T 3v9f_A 340 NAP----PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAI----------YNKEN-- 401 (781)
T ss_dssp SSC----CSCEEEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEE----------CC-----
T ss_pred CCC----CcceeeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEE----------EccCC--
Confidence 763 1222221 123568999888775 3666676666999997654210 00000
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEe
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 544 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~ 544 (812)
.......|.++...+++ .+.+++..+++..+...................|.++...++ +.+..+...+...+
T Consensus 402 -~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~--g~lwigt~~Gl~~~--- 474 (781)
T 3v9f_A 402 -RELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN--KKIWIGTHAGVFVI--- 474 (781)
T ss_dssp ---CCCSBEEEEEECTTS-CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT--SEEEEEETTEEEEE---
T ss_pred -CCCCCcceEEEEECCCC-CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC--CCEEEEECCceEEE---
Confidence 01123468888887765 355555456766664332211100000112357888877776 44444443432222
Q ss_pred ecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccc
Q psy4510 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQT 624 (812)
Q Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~ 624 (812)
.... ... ..+.. . ... ......|.++...++|...+.. ..+-|..|+..+..-
T Consensus 475 ~~~~---~~~---~~~~~-~----------~~~------~~~~~~i~~i~~d~~g~lWigt---~~~Gl~~~~~~~~~~- 527 (781)
T 3v9f_A 475 DLAS---KKV---IHHYD-T----------SNS------QLLENFVRSIAQDSEGRFWIGT---FGGGVGIYTPDMQLV- 527 (781)
T ss_dssp ESSS---SSC---CEEEC-T----------TTS------SCSCSCEEEEEECTTCCEEEEE---SSSCEEEECTTCCEE-
T ss_pred eCCC---CeE---Eeccc-C----------ccc------ccccceeEEEEEcCCCCEEEEE---cCCCEEEEeCCCCeE-
Confidence 1110 000 00000 0 000 0013468889888888765553 334477788765431
Q ss_pred cCCcccccccccccCCCCCCCCCCeeeec---C-CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------
Q psy4510 625 VDDPFQLAEHNKKRGKGPGIPTPPLFSFS---G-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--------- 691 (812)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~--------- 691 (812)
..+. + ....|.++...+ ++.+.++.. .|.|..||..+++.
T Consensus 528 -------------------------~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl 580 (781)
T 3v9f_A 528 -------------------------RKFNQYEGFCSNTINQIYRSS-KGQMWLATG-EGLVCFPSARNFDYQVFQRKEGL 580 (781)
T ss_dssp -------------------------EEECTTTTCSCSCEEEEEECT-TSCEEEEET-TEEEEESCTTTCCCEEECGGGTC
T ss_pred -------------------------EEccCCCCCCCCeeEEEEECC-CCCEEEEEC-CCceEEECCCCCcEEEccccCCC
Confidence 1111 1 234788999988 666655544 67657888776432
Q ss_pred ----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccc---ccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 692 ----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 692 ----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~---~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
+..++..++|.+.+++ ..| |..++..+... . .... +....-...++...++|+ |.-|+.+|.+ .++
T Consensus 581 ~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~-~-~~~~~dGl~~~~f~~~~~~~~~~G~--l~~g~~~Gl~-~f~ 653 (781)
T 3v9f_A 581 PNTHIRAISEDKNGNIWAST-NTG-ISCYITSKKCF-Y-TYDHSNNIPQGSFISGCVTKDHNGL--IYFGSINGLC-FFN 653 (781)
T ss_dssp SCCCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEE-E-EECGGGTCCSSCEEEEEEEECTTSC--EEEEETTEEE-EEC
T ss_pred CCceEEEEEECCCCCEEEEc-CCc-eEEEECCCCce-E-EecccCCccccccccCceEECCCCE--EEEECCCceE-EEC
Confidence 2233455667655554 444 66777665431 0 0111 111222345677788997 5556667744 445
Q ss_pred ec
Q psy4510 765 RR 766 (812)
Q Consensus 765 ~~ 766 (812)
.+
T Consensus 654 p~ 655 (781)
T 3v9f_A 654 PD 655 (781)
T ss_dssp SC
T ss_pred hh
Confidence 44
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-08 Score=105.41 Aligned_cols=264 Identities=9% Similarity=-0.034 Sum_probs=158.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
+.|.++|..+.+ ....+..-..+ .++++|++++|..+. .++.|.++|..+. +.+.++
T Consensus 99 ~~VsVID~~t~~----vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-------~vv~~I 165 (426)
T 3c75_H 99 TQQFVIDGSTGR----ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-------LPIADI 165 (426)
T ss_dssp EEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-------CEEEEE
T ss_pred CeEEEEECCCCE----EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-------cEEEEE
Confidence 699999998876 33334333345 899999999998876 4678999999885 555554
Q ss_pred cCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE
Q psy4510 269 SGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339 (812)
Q Consensus 269 ~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 339 (812)
.-. ......+.|+|++ ++|+++.. ++.|.+.|+.+.+. ...+.- .+ +....|+++..+++.+
T Consensus 166 ~v~g~~r~~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~~t~kv----v~~I~v-~g---~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 166 ELPDAPRFLVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDLEGKTF----DRMLDV-PD---CYHIFPASPTVFYMNC 236 (426)
T ss_dssp EETTCCCCCBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEETTTTEE----EEEEEC-CS---EEEEEEEETTEEEEEE
T ss_pred ECCCccccccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEECCCCeE----EEEEEc-CC---ceeeccCCCcEEEEEc
Confidence 311 1234578999999 66666653 57899999998762 222221 11 1334455555677788
Q ss_pred CCCeEEEEECCCCCcccce-eecCCcCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC--CCceEEcc-------
Q psy4510 340 VDLSIRIWDTRVINTKSCM-LTLPNAHTSD-VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK--GSSVATFK------- 408 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~------- 408 (812)
.||.+.+.+.......... ..+ .....+ ...+.+.+++..++.....+.|.+.|+..... ........
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~-~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVF-HTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCC-SCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred CCCCEEEEECCCCcEEEEeeeee-ccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 8888888888432211000 011 111111 12356788888666667789999999853110 00111000
Q ss_pred cCCCCEEEEEEccCCCcEEEEEEC---------CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc
Q psy4510 409 HHTAPVTTVEWHPTESSTFASGGA---------DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479 (812)
Q Consensus 409 ~h~~~v~~v~~~p~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 479 (812)
........+.++|++.+++++... .+.|.+.|+.+.+. +...........+.|+
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-----------------v~~I~vg~~P~gia~s 378 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-----------------INKIELGHEIDSINVS 378 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-----------------EEEEEEEEEECEEEEC
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-----------------EEEEECCCCcCeEEEc
Confidence 001111236899997655555431 35799999998842 2222212358899999
Q ss_pred CCCC-CEEEEEe-CCCeEEEEeCCC
Q psy4510 480 PQLP-GTIISTA-NSGFNIFRTISD 502 (812)
Q Consensus 480 p~~~-~~~~~~~-~~~~~~~~~~~~ 502 (812)
|++. .++++.. .+.+.+++..+.
T Consensus 379 pDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 379 QDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEETTTC
T ss_pred cCCCEEEEEEcCCCCeEEEEECCCC
Confidence 9987 4555553 455667765544
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.9e-08 Score=98.84 Aligned_cols=236 Identities=10% Similarity=-0.007 Sum_probs=144.6
Q ss_pred cCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 219 LGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+..........+|+++++ ++++...++.|..|+.. + . ...+..+...+.++++++++ .++++...++.|
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-------~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v 109 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-------T-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAI 109 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-------C-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-------C-EEEEeCCCCccceeeECCCC-CEEEEECCCCEE
Confidence 334455667889999998 45566678899999873 2 2 34555567788999999998 566665556789
Q ss_pred EEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEE----EEC-------------CCeEEEEECCCCCccccee
Q psy4510 298 HIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLAS----CSV-------------DLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~ 359 (812)
.+|+.. +.. ........+ ....++++++.|+|. ++++ |.. .+.|..+|..++.. .
T Consensus 110 ~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----~ 182 (305)
T 3dr2_A 110 TRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----Q 182 (305)
T ss_dssp EEECTT-SCE-EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC----E
T ss_pred EEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE----E
Confidence 999986 431 111111111 123578899999998 5665 321 25677777653321 1
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDD------GCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
.+ . .....+.++|+|+++.|+.+... +.|.+|++.... ......+ ....+....+++.++|. + .+++.
T Consensus 183 ~~-~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~-l-wv~~~ 257 (305)
T 3dr2_A 183 RM-A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW-L-WSSSG 257 (305)
T ss_dssp EE-E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC-E-EECCS
T ss_pred EE-e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC-E-EEecC
Confidence 22 1 23456889999999977766654 689999986311 0000111 11233456788999874 4 44444
Q ss_pred CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 433 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
++ |.+|+.... .+...... ..+..++|.|++..+++++. +++..
T Consensus 258 ~g-v~~~~~~g~-----------------~~~~~~~~-~~~~~~~f~~d~~~L~it~~-~~l~~ 301 (305)
T 3dr2_A 258 TG-VCVFDSDGQ-----------------LLGHIPTP-GTASNCTFDQAQQRLFITGG-PCLWM 301 (305)
T ss_dssp SE-EEEECTTSC-----------------EEEEEECS-SCCCEEEECTTSCEEEEEET-TEEEE
T ss_pred Cc-EEEECCCCC-----------------EEEEEECC-CceeEEEEeCCCCEEEEEcC-CeEEE
Confidence 54 999987533 22222222 35888999987655555554 44433
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.90 E-value=7.1e-08 Score=100.54 Aligned_cols=249 Identities=7% Similarity=-0.073 Sum_probs=150.0
Q ss_pred CceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCCccccc--ccccCCCCCCeeeeeEcCCCCcEEEeeC-----CCce
Q psy4510 177 TEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVD--QKPLGGHTNSAEDLQWSDLKTALQTVDD-----PFQL 247 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~~~~~~--~~~l~~h~~~V~~l~~s~~~~~l~s~~~-----d~~i 247 (812)
..+..++++| +|+++++.. .++.++||.+.++...... .....+|...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6788999999 999998863 2343666666532211000 0122346678999999999886655433 5789
Q ss_pred EEeeCCCCCCCCCCCCCceEEcC------CCCcEEEEEecCCCCCEEEEEe---CCCcEEEEeCCCCCcceeccc--cc-
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSG------HLTEGFAMDWSSTEPGVLATGD---CKRNIHIWTPREAGAWQVDQK--PL- 315 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~--~~- 315 (812)
.+||+.++ +.+.++.. +......+++++++...+++.. .++.|.+||+.++..+..... .+
T Consensus 96 ~~~d~~tg-------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 96 VAWDTLNN-------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp EEEETTTT-------EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred EEEECCCC-------eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 99999875 33333322 2235678999987534455555 578999999987653222110 00
Q ss_pred --------cC--------------CCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCc-----ccceeecC-CcCC
Q psy4510 316 --------VG--------------HTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINT-----KSCMLTLP-NAHT 366 (812)
Q Consensus 316 --------~~--------------h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~-----~~~~~~~~-~~~~ 366 (812)
.+ ....+..|+|+|+++. |+.+...+ .|..++...... ......+. .++.
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK 247 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence 00 0124688999999985 55555544 555555321000 00000000 1233
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 367 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
.....++++++|+++++...++.|.+||... ++ +..+.. +.....+++|.+++ .++++.+..+.+.+|
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~---G~-~~~~~~~~~~~~p~~va~~~~g-~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSAD---RA-YKLLVTDEKLSWTDSFNFGSDG-YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTT---TE-EEEEEECGGGSCEEEEEECTTS-CEEEEECCGGGSGGG
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCC---CC-EEEEEECCceecCCeeEECCCC-cEEEEeCcccccccc
Confidence 4566789999999999998899999999832 22 222221 24568899999876 566666544444333
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.1e-07 Score=103.76 Aligned_cols=194 Identities=12% Similarity=0.149 Sum_probs=111.9
Q ss_pred CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc----------E-EEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE----------G-FAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 235 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~----------v-~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
+..|+.++.++.|..+|..+| +.+.++..+... + ..+.. .+ .++++++.|+.|..+|..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG-------~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~-g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDG-------RLIWKYDPQSDRHRAGEACCDAVNRGVAV--WK-GKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTC-------CEEEEECCCCCGGGGGGCTTCSCCCCCEE--ET-TEEEEECTTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCC-------ceeEEEcCCCCccccccccccCCCCccEE--EC-CEEEEEccCCEEEEEECC
Confidence 456666777788888888876 444444332210 0 11122 23 688889999999999999
Q ss_pred CCCc-ceeccccccCCCCCEEEEEEcC---CCCeEEEEEE-----CCCeEEEEECCCCCcccceeecCC-----------
Q psy4510 304 EAGA-WQVDQKPLVGHTNSVEDLQWSP---GEKRVLASCS-----VDLSIRIWDTRVINTKSCMLTLPN----------- 363 (812)
Q Consensus 304 ~~~~-~~~~~~~~~~h~~~v~~~~~~p---~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~----------- 363 (812)
+++. |..... .+......+..+| ++. +++.++ .+|.|+.||.++++..........
T Consensus 140 TG~~~W~~~~~---~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~ 215 (689)
T 1yiq_A 140 TGQRAWSVDTR---ADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGM 215 (689)
T ss_dssp TCCEEEEEECC---SCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHH
T ss_pred CCCEeeeecCc---CCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccc
Confidence 8874 222111 0100000111111 343 444332 378999999986654322221100
Q ss_pred ----------------cCCCCeEEEEEcCCCCEEEEEeCCCc-------------------EEEEecCCCCCCCceEEcc
Q psy4510 364 ----------------AHTSDVNVISWNRTEPLIVSGGDDGC-------------------IHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 364 ----------------~~~~~v~~l~~~~~~~~l~sg~~dg~-------------------i~iwd~~~~~~~~~~~~~~ 408 (812)
.+......++++|.+.+++.++.++. |..+|.+ +++.+..++
T Consensus 216 ~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~---TG~~~W~~~ 292 (689)
T 1yiq_A 216 EIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD---TGEYVWHYQ 292 (689)
T ss_dssp HHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT---TCCEEEEEE
T ss_pred cccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc---CCceeEeee
Confidence 11111235788888888888887764 9999998 577777665
Q ss_pred c--CC-------CCEEEEEEccCCC--cEEEEEECCCCEEEEEcCCCC
Q psy4510 409 H--HT-------APVTTVEWHPTES--STFASGGADDQIALWDLAVER 445 (812)
Q Consensus 409 ~--h~-------~~v~~v~~~p~~~--~~l~s~~~dg~v~iwd~~~~~ 445 (812)
. |. .++.-.....++. ..++.++.+|.++++|..+++
T Consensus 293 ~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 293 TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 4 21 1222222222331 278889999999999998884
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.82 E-value=6.6e-08 Score=100.26 Aligned_cols=223 Identities=7% Similarity=-0.086 Sum_probs=133.0
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCceEEc
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLFSFS 269 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~ 269 (812)
+|.+.|..+.+ .+.++..-..+ .++++|+++++..+. .++.|.+||..++ +.+.++.
T Consensus 47 ~vsvID~~t~~----v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-------~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGV----TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-------LPIADIE 113 (368)
T ss_dssp EEEEEETTTTE----EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-------CEEEEEE
T ss_pred eEEEEECCCCe----EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-------CEEEEEE
Confidence 78899998876 34444433445 799999999998886 3688999999985 6677764
Q ss_pred CC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEE--EeCCCCCcceeccc----cccCC---------CCCEEEE
Q psy4510 270 GH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHI--WTPREAGAWQVDQK----PLVGH---------TNSVEDL 325 (812)
Q Consensus 270 ~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~v--wd~~~~~~~~~~~~----~~~~h---------~~~v~~~ 325 (812)
.. ......++++|++ ++|+++.. ...|.+ +|+.+-. .+... ....+ .+.+..+
T Consensus 114 v~~~~~~~~g~~P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~tv~--~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASDDQ--LTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTTS-SCEEEEECSSSCEEEEEETTTEEEE--EEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred CCCccccccCCCcceEEEcCCC-CEEEEEccCCCCeEEEEEEchhhce--EEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 32 1235689999999 56666653 457888 8886511 00000 00000 0000000
Q ss_pred E--------------------------EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC---------cCCCCeE
Q psy4510 326 Q--------------------------WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN---------AHTSDVN 370 (812)
Q Consensus 326 ~--------------------------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~v~ 370 (812)
. ..+++.. ++..+. +.|.+.|+..... ..+..+.. .......
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~-~~~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGM-LVWAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTE-EEECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHHTTEEECSSS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCccccccCCE-EEEEcC-CEEEEEECCCCcc-eEEEEEEeccccccccccccCcce
Confidence 0 0222332 222223 5666666642110 01111100 0111122
Q ss_pred EEEEcCCCCEEEEEeC---------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEE
Q psy4510 371 VISWNRTEPLIVSGGD---------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWD 440 (812)
Q Consensus 371 ~l~~~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd 440 (812)
.++++|+++.++.+.. ++.+.++|+. +.+.+..+.... ...+|.|+|++..++++.. .++.|.++|
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~---t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS---VGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS---SCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECC---CCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 2689999986665432 2356699998 456666665433 5789999999876788888 699999999
Q ss_pred cCCCC
Q psy4510 441 LAVER 445 (812)
Q Consensus 441 ~~~~~ 445 (812)
+.+.+
T Consensus 344 ~~t~k 348 (368)
T 1mda_H 344 AASDQ 348 (368)
T ss_dssp SSSCE
T ss_pred CCCCc
Confidence 99884
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.79 E-value=6.4e-08 Score=100.34 Aligned_cols=129 Identities=11% Similarity=-0.018 Sum_probs=85.7
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCCc--
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPNA-- 364 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~-- 364 (812)
+|.+.|..+.+ ....+.....+ .+.++|+++.++++.+ .++.|.+||+.+... +.++..+
T Consensus 47 ~vsvID~~t~~----v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v---v~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGV----TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP---IADIELPDA 117 (368)
T ss_dssp EEEEEETTTTE----EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE---EEEEEETTS
T ss_pred eEEEEECCCCe----EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE---EEEEECCCc
Confidence 78899998876 33344333334 7999999997555543 478999999996443 4443211
Q ss_pred C----CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 365 H----TSDVNVISWNRTEPLIVSGGD--DGCIHV--WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 365 ~----~~~v~~l~~~~~~~~l~sg~~--dg~i~i--wd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
. ......++++|+|++++++.. ...|.+ +|+.. +..+..- +. +...|++...+++.+.|+++
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSA-SC---FHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECS-SC---CCCEEEETTEEECCCCTTSC
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECC-Cc---eEEccCCCeEEEEEcCCCCE
Confidence 0 123567899999998887764 467888 88863 3443321 11 22456666677777889999
Q ss_pred EEEEcCC
Q psy4510 437 ALWDLAV 443 (812)
Q Consensus 437 ~iwd~~~ 443 (812)
.+.|+..
T Consensus 188 ~~vd~~~ 194 (368)
T 1mda_H 188 AASDLAA 194 (368)
T ss_dssp EEEECCS
T ss_pred EEEECcc
Confidence 8999876
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.5e-09 Score=112.62 Aligned_cols=201 Identities=14% Similarity=0.086 Sum_probs=108.3
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
++.+|++++.||.|+.||..+++. +..+.. +.+.+..+..+++.+++++.++.|+.||..++ +.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~----~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG-------~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI----KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN-------EGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE----EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC------------CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE----EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCC-------ceeee
Confidence 678899999999999999998873 333333 45666667778888888889999999999886 44444
Q ss_pred EcCCCCc-EE-EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 268 FSGHLTE-GF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 268 ~~~h~~~-v~-~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
+..+... +. +..+. .+ +.+++|+.++.|+.||..+++. ...+..+. ...++|++. .+++++.|+.|+
T Consensus 75 ~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~ 143 (369)
T 2hz6_A 75 LPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLSPSTS-LLYLGRTEYTIT 143 (369)
T ss_dssp CSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEE
T ss_pred eeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcE----EEEecCCC----cccccccCC-EEEEEecCCEEE
Confidence 4333211 10 00111 23 5778888899999999998873 33333332 234566666 588888999999
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE-EEEcc
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHP 421 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p 421 (812)
.||.+++....... . .. ....++..+. ..+++++.+|.|..||.+ +++.+..+.. ..++.. ..+++
T Consensus 144 a~d~~tG~~~W~~~-~-~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~---tG~~~W~~~~-~~pv~~~~~~~~ 213 (369)
T 2hz6_A 144 MYDTKTRELRWNAT-Y-FD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE---SGDVLWIQNY-ASPVVAFYVWQR 213 (369)
T ss_dssp CCCSSSSSCCCEEE-E-EE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTT---TCCEEEEEEC-SSCEEEEEECTT
T ss_pred EEECCCCCEEEeEe-c-cc----ccCccccCCccccceEEEECCCCEEEEEECC---CCcEEEEecC-CCceEEEEEecC
Confidence 99998654322211 1 01 1222333322 457778899999999998 4666666653 344443 33344
Q ss_pred C
Q psy4510 422 T 422 (812)
Q Consensus 422 ~ 422 (812)
+
T Consensus 214 d 214 (369)
T 2hz6_A 214 E 214 (369)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.75 E-value=5.5e-07 Score=93.74 Aligned_cols=243 Identities=8% Similarity=-0.035 Sum_probs=144.3
Q ss_pred CCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-----CCc
Q psy4510 224 NSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-----KRN 296 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-----dg~ 296 (812)
.....++++++|+.+++.. .++.++||.+.++.....+.. .....+|...+.++++.+++ .++++... ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~-~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQ-SGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCC-CSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCc-ccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCe
Confidence 5788999999999888864 234366666653210000000 01122456789999999997 45554432 578
Q ss_pred EEEEeCCCCCcceecc--ccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcC------
Q psy4510 297 IHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAH------ 365 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~------ 365 (812)
|.+||+.+++...... .....+...+.+++++|++..++++.. .++.|.+||+.++... ..+ ..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~---r~~-~~~~~~~~~ 170 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA---RVL-QGYPGIAPE 170 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE---EEC-TTCTTTSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE---EEe-cCCCccccc
Confidence 9999998775211110 011123346789999987665667766 6889999998743221 111 110
Q ss_pred -----------------------CCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCCCC--------ceEEcccCCCC
Q psy4510 366 -----------------------TSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFKKGS--------SVATFKHHTAP 413 (812)
Q Consensus 366 -----------------------~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~--------~~~~~~~h~~~ 413 (812)
...++.|+|+|+++.|+.+...+ .|..++........ .+. ..++.+.
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~ 249 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSEKPI 249 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCS
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ecccCCC
Confidence 12468999999999888777665 45555432111110 011 1133445
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+++++++ .++++...++.|.+||...++. ..+.....-..+..+++.+++. ++++..
T Consensus 250 pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~---------------~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 250 CDGISIDKDH-NIYVGDLAHSAIGVITSADRAY---------------KLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp CSCEEECTTC-CEEEEEGGGTEEEEEETTTTEE---------------EEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred CceEEECCCC-CEEEEccCCCeEEEEECCCCCE---------------EEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 5678999986 6888888889999999843311 1111111123578899998753 444443
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-06 Score=90.43 Aligned_cols=286 Identities=10% Similarity=0.005 Sum_probs=161.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
+..|..++.++.|..|| .+++. ......+...+.++...+++... .++.+ +..+|. ++ +.+..+
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g-------~~~~~~ 93 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSV----KWFFKSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DG-------TEKWRF 93 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCE----EESSCGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CG-------GGGGGS
T ss_pred CCeEEEEcCCCEEEEEC-CCCcE----EEEEecCCCcccceEEecCCcEE-EecCc--EEEECC-CC-------cEEEEE
Confidence 34566677788899999 66552 22233344456778887777644 34443 777875 33 222222
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
............. + +.|..++.++.|..+|.. +.. ......+...+.++...+++. +..++.++.|..+|
T Consensus 94 ~~~~~~~~~~~~~--~-~~l~v~t~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d 163 (330)
T 3hxj_A 94 DTKKAIVSDFTIF--E-DILYVTSMDGHLYAINTD-GTE----KWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAIN 163 (330)
T ss_dssp CC-----CCEEEE--T-TEEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEEC
T ss_pred ECCCCcccCceEE--C-CEEEEEecCCEEEEEcCC-CCE----EEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEEC
Confidence 2222222222233 3 678888888999999988 542 222223344566677777776 66677889999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
.. +.. +... ......+.++...+++.+++ ++ +.|..+| . .+..+..+......+.++...+++ .|.
T Consensus 164 ~~-g~~---~~~~-~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~---~g~~~~~~~~~~~~~~~~~~~~~g--~l~ 229 (330)
T 3hxj_A 164 PD-GTE---KWRF-KTNDAITSAASIGKDGTIYF-GS--DKVYAIN-P---DGTEKWNFYAGYWTVTRPAISEDG--TIY 229 (330)
T ss_dssp TT-SCE---EEEE-ECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-T---TSCEEEEECCSSCCCSCCEECTTS--CEE
T ss_pred CC-CCE---eEEE-ecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-C---CCcEEEEEccCCcceeceEECCCC--eEE
Confidence 86 322 2222 22344566777777776444 44 7899999 4 455666666555678888888775 466
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
.++.++.|..+|.... .+.........+..+...+++ .+.+++..+++..++. .. ....
T Consensus 230 v~t~~~gl~~~~~~g~-----------------~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g--~~~~ 288 (330)
T 3hxj_A 230 VTSLDGHLYAINPDGT-----------------EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG--TEKW 288 (330)
T ss_dssp EEETTTEEEEECTTSC-----------------EEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS--CEEE
T ss_pred EEcCCCeEEEECCCCC-----------------EeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC--cEEE
Confidence 6777788888874322 121222222223344555443 3455444446666642 21 1222
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
........+.++...++ +.+.....++
T Consensus 289 ~~~~~~~~~~~~~~d~~--g~l~~gt~~G 315 (330)
T 3hxj_A 289 NFETGSWIIATPVIDEN--GTIYFGTRNG 315 (330)
T ss_dssp EEECSSCCCSCCEECTT--CCEEEECTTS
T ss_pred EEEcCCccccceEEcCC--CEEEEEcCCC
Confidence 22233445666666666 4455554444
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.62 E-value=4e-05 Score=76.33 Aligned_cols=233 Identities=8% Similarity=-0.023 Sum_probs=139.3
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.+|..+.. +.|+.+++.......... ..+......+..++|++++..|..+. ..+.|.+++.... .....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-------~~~~~ 73 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-------EPTTI 73 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC-------CCEEE
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC-------CcEEE
Confidence 34444443 478888887654211000 11111234567999999877666555 5778999998763 22222
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC--CCeEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV--DLSIR 345 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~ 345 (812)
+........++++.|++..++++-...+.|.++++...... ............++++|++..++++... .+.|.
T Consensus 74 ~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE----EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEE
Confidence 32223567899999976345555556789999998754311 1111122467899999977755555543 47888
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCC
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 424 (812)
.+++.... . ..+........+.+++++++..| ++-...+.|.++|+.. ......+. .......++.. +.
T Consensus 150 ~~~~dg~~-~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g---~~~~~~~~-~~~~P~gi~~d--~~ 219 (267)
T 1npe_A 150 TSHMDGTN-R---RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ---PGRRKVLE-GLQYPFAVTSY--GK 219 (267)
T ss_dssp EEETTSCC-C---EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE---EEEEEEEE-CCCSEEEEEEE--TT
T ss_pred EEecCCCC-c---EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC---CceEEEec-CCCCceEEEEe--CC
Confidence 88876321 1 11111223467899999987644 5555668999999863 11122222 22334566654 44
Q ss_pred cEEEEEECCCCEEEEEcCCC
Q psy4510 425 STFASGGADDQIALWDLAVE 444 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~ 444 (812)
.++++....+.|..+|..+.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp EEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEeCCCC
Confidence 45555555688999998866
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.6e-06 Score=90.13 Aligned_cols=233 Identities=13% Similarity=0.045 Sum_probs=140.9
Q ss_pred EeC--CCCCCeE-EEecCCCcEEEEccCCCCcccccccccC------CC-CCCeeeeeEcCCCCcEEEeeCC------Cc
Q psy4510 183 DWS--STEPGVL-ATGDCKRNIHIWTPREAGAWQVDQKPLG------GH-TNSAEDLQWSDLKTALQTVDDP------FQ 246 (812)
Q Consensus 183 ~~s--p~~~~~l-at~~~dg~v~iwd~~~~~~~~~~~~~l~------~h-~~~V~~l~~s~~~~~l~s~~~d------~~ 246 (812)
.++ + ++++| ++|..+++|+|+|+.+........+++. .. ...-..+..+|+| .++++..+ +.
T Consensus 88 ~~~~~~-~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNI-ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTC-CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred ccCCCc-cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 446 6 66655 5677889999999975422111222221 11 1133456778999 66665544 78
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCC---CcEEEEEecCCCCCEEEEEe-------------------CCCcEEEEeCCC
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHL---TEGFAMDWSSTEPGVLATGD-------------------CKRNIHIWTPRE 304 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~sp~~~~~l~sg~-------------------~dg~i~vwd~~~ 304 (812)
+.+.|..+. +.+.++.... .-.+.+.|+|++ +.+++.. ...+|.+||+.+
T Consensus 166 v~vlD~~T~-------~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 166 ILMLDHYSF-------EPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp EEEECTTTC-------CEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred EEEEECCCC-------eEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 999998874 5555554221 234568899998 6777774 368999999987
Q ss_pred CCcceeccccccC--CCCCEEEEEE--cCCCCeEEEEEE-----CCCeEEEEECCCCCcccceee--cCC----------
Q psy4510 305 AGAWQVDQKPLVG--HTNSVEDLQW--SPGEKRVLASCS-----VDLSIRIWDTRVINTKSCMLT--LPN---------- 363 (812)
Q Consensus 305 ~~~~~~~~~~~~~--h~~~v~~~~~--~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~--~~~---------- 363 (812)
++ ....+.- .......+.| +|+++..++++- .+++|.+|....+ ....... +..
T Consensus 238 ~k----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~~ 312 (462)
T 2ece_A 238 RK----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPEI 312 (462)
T ss_dssp TE----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCGG
T ss_pred Cc----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCcccccccccc
Confidence 54 2222221 1234456666 999998777777 7888877655421 1110110 000
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccCC--------------CCEEEEEEccCC
Q psy4510 364 -----AHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHT--------------APVTTVEWHPTE 423 (812)
Q Consensus 364 -----~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~--------------~~v~~v~~~p~~ 423 (812)
+-......|.++++|++|+++.. .+.|.+||+......+.+..+.... +.-..++++|+|
T Consensus 313 ~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 313 LKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp GGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred ccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 00245778999999997766654 6899999996432334444443220 124678999998
Q ss_pred CcEEEEEE
Q psy4510 424 SSTFASGG 431 (812)
Q Consensus 424 ~~~l~s~~ 431 (812)
. +|+++.
T Consensus 393 k-~LyVaN 399 (462)
T 2ece_A 393 R-RVYVTN 399 (462)
T ss_dssp S-EEEEEC
T ss_pred C-EEEEEc
Confidence 5 555544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.55 E-value=0.00011 Score=72.93 Aligned_cols=193 Identities=7% Similarity=-0.060 Sum_probs=117.6
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
+|..+.. +.|+.+++........ .....+........+++|++++..++++-...+.|..+++..... .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~--~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~ 75 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKT--EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----TTIIR 75 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGG--GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----EEEEC
T ss_pred EEEEEcC-CeEEEEEecCcccccc--cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----EEEEE
Confidence 3444443 4678888765310000 001112222345789999997734555555678999999876542 11112
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEE
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVW 393 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iw 393 (812)
........+++.|++..++++....+.|.++++.... ...+ . .......+.++++|++..|+.+.. .+.|..+
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~--~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVL--F-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--E-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEE--E-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 2224678999999877677777778899999986321 1111 1 122245789999997654444443 4688888
Q ss_pred ecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++.. .....+ .........++++|++..++++-...+.|.++|+...
T Consensus 152 ~~dg----~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 152 HMDG----TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp ETTS----CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred ecCC----CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 8752 222222 1223457899999987656666666789999998754
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-06 Score=87.73 Aligned_cols=261 Identities=11% Similarity=-0.009 Sum_probs=151.5
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.+.++...+ ++. |..++.+ |..+|. +++ ....+..........++. +..|..++.++.+..++.. +
T Consensus 61 ~~~~~~~~~-~g~-l~v~t~~--l~~~d~-~g~----~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g-- 126 (330)
T 3hxj_A 61 IECRPSIGK-DGT-IYFGSDK--VYAINP-DGT----EKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-G-- 126 (330)
T ss_dssp EEECCEETT-TTE-ECCSSCE--EEEECC-CGG----GGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-S--
T ss_pred cccceEEec-CCc-EEEecCc--EEEECC-CCc----EEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-C--
Confidence 345566655 555 4445444 888886 333 222222222233334443 5567778888999999987 4
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
+.......+...+.++...+++ .|..|+.++.|..+|.. +.. ...+......+.++...+++. ++ .
T Consensus 127 -----~~~~~~~~~~~~~~~~~~~~~g--~l~vgt~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~d~~g~-l~-v 192 (330)
T 3hxj_A 127 -----TEKWRFKTKKAIYATPIVSEDG--TIYVGSNDNYLYAINPD-GTE----KWRFKTNDAITSAASIGKDGT-IY-F 192 (330)
T ss_dssp -----CEEEEEECSSCCCSCCEECTTS--CEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTCC-EE-E
T ss_pred -----CEEEEEcCCCceeeeeEEcCCC--EEEEEcCCCEEEEECCC-CCE----eEEEecCCCceeeeEEcCCCE-EE-E
Confidence 3444454444555666666665 56778888999999988 542 222223345677777877776 34 4
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 417 (812)
++ +.|..+| .++ ..+... ......+.++...+++. |..++.++.|..+|. .+..+..+......+.++
T Consensus 193 ~t--~~l~~~d-~~g---~~~~~~-~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~----~g~~~~~~~~~~~~~~~~ 260 (330)
T 3hxj_A 193 GS--DKVYAIN-PDG---TEKWNF-YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP----DGTEKWRFKTGKRIESSP 260 (330)
T ss_dssp ES--SSEEEEC-TTS---CEEEEE-CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT----TSCEEEEEECSSCCCSCC
T ss_pred Ee--CEEEEEC-CCC---cEEEEE-ccCCcceeceEECCCCe-EEEEcCCCeEEEECC----CCCEeEEeeCCCCccccc
Confidence 44 8899999 432 223333 23345678888888775 455666778888875 345555555444444455
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
...+++ .|..++.+|.|..+|. ..+ ...........+.++...+++ .+..++.+|...+
T Consensus 261 ~~~~~g--~l~v~t~~ggl~~~d~-~g~----------------~~~~~~~~~~~~~~~~~d~~g--~l~~gt~~G~~~~ 319 (330)
T 3hxj_A 261 VIGNTD--TIYFGSYDGHLYAINP-DGT----------------EKWNFETGSWIIATPVIDENG--TIYFGTRNGKFYA 319 (330)
T ss_dssp EECTTS--CEEEECTTCEEEEECT-TSC----------------EEEEEECSSCCCSCCEECTTC--CEEEECTTSCEEE
T ss_pred eEcCCC--eEEEecCCCCEEEECC-CCc----------------EEEEEEcCCccccceEEcCCC--EEEEEcCCCeEEE
Confidence 565554 5777888888999985 332 122222233456666666663 3444555555544
Q ss_pred Ee
Q psy4510 498 RT 499 (812)
Q Consensus 498 ~~ 499 (812)
..
T Consensus 320 ~~ 321 (330)
T 3hxj_A 320 LF 321 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 43
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=0.0028 Score=70.83 Aligned_cols=200 Identities=11% Similarity=-0.019 Sum_probs=118.2
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
..+.+++|++.++.+..+-...+.|..++++.... ....+..--.....|++.+.+..|..+. ..+.|.+.+++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~---~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES---VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc---eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 45788999994555555666678898888876431 1112222234678999999777666554 5788999998763
Q ss_pred CCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
....+ ........+|++.|.+ +.|...+. .+.|...++...... ......-...+.|++.+.++
T Consensus 117 --------~~~~l~~~~l~~P~~Iavdp~~-g~ly~tD~g~~~~I~r~~~dG~~~~----~l~~~~~~~P~Glald~~~~ 183 (619)
T 3s94_A 117 --------LRKVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSRF----IIINSEIYWPNGLTLDYEEQ 183 (619)
T ss_dssp --------SCEEEECSSCSCCCCEEEETTT-TEEEEEECSSSCEEEEEETTSCSCE----EEECSSCSSEEEEEEETTTT
T ss_pred --------CEEEEEeCCCCCCceEEEecCC-CeEEEeccCCCCEEEEEECCCCceE----EEEeCCCCCCcEEEEEccCC
Confidence 22222 2344556789999976 45554443 356776776644321 11112334678999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.++++-...+.|...|+....... +. .........|++..+ .++++-...+.|...|..+
T Consensus 184 ~LY~aD~~~~~I~~~~~dG~~~~~-~~---~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 184 KLYWADAKLNFIHKSNLDGTNRQA-VV---KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEEEEETTTCCEEEESSSCCEEC-------------CCCEEESSS-EEEEECTTTCSEEEEESSS
T ss_pred EEEEEeCCCCeEEEecCCCCccEE-EE---eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCC
Confidence 777776777889998886422211 11 111122245666544 4555555667788888753
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.8e-06 Score=93.70 Aligned_cols=239 Identities=11% Similarity=0.057 Sum_probs=138.5
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC---CCCcEEEee------CCCceEEeeCCCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD---LKTALQTVD------DPFQLAEHNKKRGKGP 258 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~---~~~~l~s~~------~d~~i~vwd~~~~~~~ 258 (812)
.+..|++++.|+.|..+|..+++..-... ...+......+..+| ++. ++.+. .++.|..||..++
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~--~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG--- 193 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVD--TRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETG--- 193 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEE--CCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTC---
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeec--CcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCC---
Confidence 35677888889999999998887421111 110111111111112 444 44443 3688999999987
Q ss_pred CCCCCCceEEcC-------------------------------CCCcEEEEEecCCCCCEEEEEeCCCc-----------
Q psy4510 259 GIPTPPLFSFSG-------------------------------HLTEGFAMDWSSTEPGVLATGDCKRN----------- 296 (812)
Q Consensus 259 ~~~~~~~~~~~~-------------------------------h~~~v~~l~~sp~~~~~l~sg~~dg~----------- 296 (812)
+.+..+.. +......+++.|+. ++++.+..++.
T Consensus 194 ----~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~ 268 (689)
T 1yiq_A 194 ----KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAK 268 (689)
T ss_dssp ----CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTC
T ss_pred ----cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCC
Confidence 33333321 01111257788877 78888877763
Q ss_pred --------EEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcccce
Q psy4510 297 --------IHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSCM 358 (812)
Q Consensus 297 --------i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~ 358 (812)
|..+|..+++. |... ...|. ..+.......+++ .+++.++.+|.++++|.++++.....
T Consensus 269 gd~~y~~~v~AlD~~TG~~~W~~~---~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 269 GDNLFLSSIVAVNADTGEYVWHYQ---TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp SCCTTTTEEEEEETTTCCEEEEEE---SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCceeeeeEEEEEccCCceeEeee---cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 99999999874 2111 11121 1221112222342 36888999999999999865432110
Q ss_pred eecC------------------------CcCC-----------CCeEEEEEcCCCCEEEEEeC-----------------
Q psy4510 359 LTLP------------------------NAHT-----------SDVNVISWNRTEPLIVSGGD----------------- 386 (812)
Q Consensus 359 ~~~~------------------------~~~~-----------~~v~~l~~~~~~~~l~sg~~----------------- 386 (812)
.... .... ..-..++++|+..++++...
T Consensus 346 ~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 346 GIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp ESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCS
T ss_pred cccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccc
Confidence 0000 0000 01123788888887776532
Q ss_pred ----------------------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 387 ----------------------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 387 ----------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+|.|+.||+. +++.+..+..+.. +..-.+...+ .+++.++.|+.|+.
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~---tG~~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a 500 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV---KQQAAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIA 500 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT---TTEEEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEE
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECC---CCCeEeEccCCCC-ccCccceECC-CEEEEECCCCcEEE
Confidence 3779999997 5667777665432 3333445555 48888999999999
Q ss_pred EEcCCCC
Q psy4510 439 WDLAVER 445 (812)
Q Consensus 439 wd~~~~~ 445 (812)
||.++++
T Consensus 501 ~D~~tG~ 507 (689)
T 1yiq_A 501 YAADTGE 507 (689)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9999984
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.50 E-value=5.6e-05 Score=78.61 Aligned_cols=235 Identities=10% Similarity=0.002 Sum_probs=138.0
Q ss_pred eeeEc--CCCCcEEEe-eCCCceEEeeCCCCCCCCCCCCCceEEc------C-CCCcEEEEEecCCCCCEEEEEeCC---
Q psy4510 228 DLQWS--DLKTALQTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFS------G-HLTEGFAMDWSSTEPGVLATGDCK--- 294 (812)
Q Consensus 228 ~l~~s--~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~sp~~~~~l~sg~~d--- 294 (812)
+.+++ .++++|+.. ..++.|.|.|+.+... ..+...++. . -...-..+..+|++ +++++..+
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~---~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g 160 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPR---EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEG 160 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTT---SCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTS
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCC---CceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCC
Confidence 34556 788877655 4788999999875310 112233331 0 11244567888997 65555544
Q ss_pred ---CcEEEEeCCCCCcceeccccccC--C-CCCEEEEEEcCCCCeEEEEEE-------------------CCCeEEEEEC
Q psy4510 295 ---RNIHIWTPREAGAWQVDQKPLVG--H-TNSVEDLQWSPGEKRVLASCS-------------------VDLSIRIWDT 349 (812)
Q Consensus 295 ---g~i~vwd~~~~~~~~~~~~~~~~--h-~~~v~~~~~~p~~~~~l~s~~-------------------~dg~i~iwd~ 349 (812)
|.|.+.|..+.+ ....+.. . ...-.++.|+|+++ ++++.. ...+|.+||+
T Consensus 161 ~~~g~v~vlD~~T~~----v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 161 EGPGGILMLDHYSFE----PLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp CSCCEEEEECTTTCC----EEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CCCCeEEEEECCCCe----EEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 789999999876 3333321 1 22345788999999 466653 3789999999
Q ss_pred CCCCcccceeecCCc-CCCCeEEEEE--cCCCCEEEEEe------CCCcEEEEecCCCCCCCceEEc--cc---------
Q psy4510 350 RVINTKSCMLTLPNA-HTSDVNVISW--NRTEPLIVSGG------DDGCIHVWDLRRFKKGSSVATF--KH--------- 409 (812)
Q Consensus 350 ~~~~~~~~~~~~~~~-~~~~v~~l~~--~~~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~~--~~--------- 409 (812)
.+. +.+.++..+ .......+.| +|+++++++++ .+++|.+|.... ......+.+ ..
T Consensus 236 ~~~---k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 236 RKR---KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp TTT---EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCG
T ss_pred CCC---cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccc
Confidence 853 333444222 1123344555 99999766665 566887766542 101111110 00
Q ss_pred -------CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC-----------C-
Q psy4510 410 -------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG-----------Q- 470 (812)
Q Consensus 410 -------h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~- 470 (812)
-......|.++|++..+.++.-..+.|.++|+...... ..+..+..+ .
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~-------------~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP-------------VLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC-------------EEEEEEECBTTTTCBCCTTSCC
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-------------EEEEEEEeCCeecccccccccc
Confidence 02346789999998644555555789999998633211 011122221 0
Q ss_pred --CceeEEEEcCCCCCEEEEE
Q psy4510 471 --KEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 471 --~~v~~~~~~p~~~~~~~~~ 489 (812)
.....+.++|++..++++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1357788999987777776
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.48 E-value=0.00014 Score=76.57 Aligned_cols=128 Identities=12% Similarity=-0.014 Sum_probs=79.5
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
+..++++ +.++.|..+|..+++. +.... ......+... +..|..++.+
T Consensus 239 ~~~v~~~--~~~g~l~~~d~~tG~~-------------------------~w~~~--~~~~~~~~~~---~~~l~~~~~~ 286 (376)
T 3q7m_A 239 NGVVFAL--AYNGNLTALDLRSGQI-------------------------MWKRE--LGSVNDFIVD---GNRIYLVDQN 286 (376)
T ss_dssp TTEEEEE--CTTSCEEEEETTTCCE-------------------------EEEEC--CCCEEEEEEE---TTEEEEEETT
T ss_pred CCEEEEE--ecCcEEEEEECCCCcE-------------------------Eeecc--CCCCCCceEE---CCEEEEEcCC
Confidence 3456666 6788999999987752 22221 1123334432 3467777788
Q ss_pred ceEEEEecCCCceeEEEE---------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce
Q psy4510 679 RNIHIWTPREAGAWSVYL---------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 749 (812)
Q Consensus 679 g~v~iWd~~~~~~~~~~~---------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~ 749 (812)
+.|..+|..+|+..-... ....+..|.+++.+|.|+++|..+++. +.........+.+.....++.
T Consensus 287 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~----~~~~~~~~~~~~~~~~~~~~~- 361 (376)
T 3q7m_A 287 DRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRF----VAQQKVDSSGFQTEPVAADGK- 361 (376)
T ss_dssp CCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCE----EEEEECCTTCBCSCCEEETTE-
T ss_pred CeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcE----EEEEecCCCcceeCCEEECCE-
Confidence 899999998877532211 011346788889999999999999873 223322223333322223554
Q ss_pred eEEeeccCCceEEee
Q psy4510 750 VLASCSVDRSNRIGA 764 (812)
Q Consensus 750 ~L~s~s~Dg~i~iWd 764 (812)
|+.++.||.|..|+
T Consensus 362 -l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 362 -LLIQAKDGTVYSIT 375 (376)
T ss_dssp -EEEEBTTSCEEEEE
T ss_pred -EEEEeCCCEEEEEe
Confidence 77788899999886
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=98.48 E-value=0.00033 Score=73.62 Aligned_cols=146 Identities=9% Similarity=0.041 Sum_probs=83.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCc-ceeccccccC--C--CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee
Q psy4510 286 GVLATGDCKRNIHIWTPREAGA-WQVDQKPLVG--H--TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT 360 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~--h--~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 360 (812)
+.+++++.++.|..+|..+++. |......... + ...+...... .+. .++.++.++.|..+|..+++. +..
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~v~~~~g~l~a~d~~tG~~---~W~ 128 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGG-HVYIGSEKAQVYALNTSDGTV---AWQ 128 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETT-EEEEEETTSEEEEEETTTCCE---EEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCC-EEEEEcCCCEEEEEECCCCCE---EEE
Confidence 6788888889999999988763 2211110000 0 1223222222 234 477788899999999986543 222
Q ss_pred cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCE-----EEEEEccCCCcEEEEEECCCC
Q psy4510 361 LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV-----TTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 361 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~~l~s~~~dg~ 435 (812)
... ........... +..++.++.++.|..+|.+ +++.+..+....... ...... + ..++.++.++.
T Consensus 129 ~~~-~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~---tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~ 199 (376)
T 3q7m_A 129 TKV-AGEALSRPVVS--DGLVLIHTSNGQLQALNEA---DGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGR 199 (376)
T ss_dssp EEC-SSCCCSCCEEE--TTEEEEECTTSEEEEEETT---TCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTE
T ss_pred EeC-CCceEcCCEEE--CCEEEEEcCCCeEEEEECC---CCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCE
Confidence 211 11111111111 4478888899999999997 466666554322111 112222 2 36777888899
Q ss_pred EEEEEcCCCC
Q psy4510 436 IALWDLAVER 445 (812)
Q Consensus 436 v~iwd~~~~~ 445 (812)
|..+|..+++
T Consensus 200 l~~~d~~tG~ 209 (376)
T 3q7m_A 200 VSAVLMEQGQ 209 (376)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 9999998773
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-05 Score=83.04 Aligned_cols=243 Identities=12% Similarity=0.042 Sum_probs=144.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccc-cc--------------CCCCCCeeeeeEcC-CCCcEEE
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK-PL--------------GGHTNSAEDLQWSD-LKTALQT 240 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~-~l--------------~~h~~~V~~l~~s~-~~~~l~s 240 (812)
.....++|.+ +++++.++..++.|..|+..+......... .. ......+..+++.+ +++ |..
T Consensus 19 ~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 3455688999 899888888899999998876432110000 00 00123578899997 554 555
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEcC-----CCCcEEEEEecC-CCCCEEEEEeC-----------------CCcE
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-----HLTEGFAMDWSS-TEPGVLATGDC-----------------KRNI 297 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp-~~~~~l~sg~~-----------------dg~i 297 (812)
+...+.+.+++..++ .+..+.. .......+++.+ ++ .+.++-.. .+.|
T Consensus 97 ~d~~~~i~~~d~~~g--------~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGG--------HATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp EETTTEEEEECTTCE--------ECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred EECCCCEEEEeCCCC--------EEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceE
Confidence 554455788886653 1122211 113467899999 87 55555322 3678
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
..++..++.. ..+.......+.++|+|+++.++++-+..+.|..+++....... ...+.. ..+ ...+++.++
T Consensus 168 ~~~d~~~~~~-----~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~-~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 168 IKYDPSTKET-----TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVK-IPN-PGNIKRNAD 239 (322)
T ss_dssp EEEETTTTEE-----EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEE-CSS-EEEEEECTT
T ss_pred EEEeCCCCEE-----EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEe-CCC-CCCeEECCC
Confidence 8888765531 11111123456799999998656666677899999987432111 111111 123 788999999
Q ss_pred CCEEEEEeC----------CCcEEEEecCCCCCCCceEEcccCC----CCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 378 EPLIVSGGD----------DGCIHVWDLRRFKKGSSVATFKHHT----APVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 378 ~~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
|+++++... .+.|..+|.. ++.+..+.... ..++++.+. + ..++++....+.|..+++..
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~----G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF----GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTT----SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC--
T ss_pred CCEEEEecCcccccccCCCccEEEEECCC----CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccc
Confidence 986666544 4667888763 45555554332 346667663 3 35666655678899999865
Q ss_pred C
Q psy4510 444 E 444 (812)
Q Consensus 444 ~ 444 (812)
.
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.2e-05 Score=91.32 Aligned_cols=237 Identities=11% Similarity=0.074 Sum_probs=140.7
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCC-----CCCeeeeeEcCCCCcEEEeeC------CCceEEeeCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH-----TNSAEDLQWSDLKTALQTVDD------PFQLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h-----~~~V~~l~~s~~~~~l~s~~~------d~~i~vwd~~~~~ 256 (812)
.+..|++++.|+.|..+|..+++.. ..+..+ ...+.+.-...+ ..++.++. ++.|+.+|..++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~----W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG- 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEV----WHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETG- 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEE----EEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTC-
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEE----eeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCC-
Confidence 4567777888999999999888742 222211 112222111123 34554443 688999999887
Q ss_pred CCCCCCCCceEEcCCC--------------------------------CcEEEEEecCCCCCEEEEEeCCC---------
Q psy4510 257 GPGIPTPPLFSFSGHL--------------------------------TEGFAMDWSSTEPGVLATGDCKR--------- 295 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~--------------------------------~~v~~l~~sp~~~~~l~sg~~dg--------- 295 (812)
+.+.++.... .....+++.|++ ++++.+..++
T Consensus 201 ------~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~ 273 (677)
T 1kb0_A 201 ------ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRS 273 (677)
T ss_dssp ------CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHS
T ss_pred ------cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCC
Confidence 3343332211 111357788887 7877776654
Q ss_pred ----------cEEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcc
Q psy4510 296 ----------NIHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 296 ----------~i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
.|..+|..+++. |.. ....|. ....-+....+|+ .+++.++.+|.|+++|.++++..
T Consensus 274 ~~~gd~~~~~sv~AlD~~TG~~~W~~---~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 274 PKGGDNLYLASIVALDPDTGKYKWHY---QETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEE---ESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccCCCCeeeEEEEEEECCCCCEEEEE---ecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 499999998874 221 111121 1122223333563 47899999999999999865432
Q ss_pred cceeecC-------CcCCCC------------------------eEEEEEcCCCCEEEEEeC------------------
Q psy4510 356 SCMLTLP-------NAHTSD------------------------VNVISWNRTEPLIVSGGD------------------ 386 (812)
Q Consensus 356 ~~~~~~~-------~~~~~~------------------------v~~l~~~~~~~~l~sg~~------------------ 386 (812)
....... ...... -..++++|++.++++...
T Consensus 351 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 351 SAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCC
T ss_pred ccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccc
Confidence 1111000 000000 125688898887776543
Q ss_pred -------------------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 387 -------------------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 387 -------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.|.|..||+. +++.+..+.. ..++.+..+...+ .+++.++.||.+++||+
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~---tG~~~W~~~~-~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV---AQKAAWSVEH-VSPWNGGTLTTAG-NVVFQGTADGRLVAYHA 505 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT---TTEEEEEEEE-SSSCCCCEEEETT-TEEEEECTTSEEEEEET
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCC---CCcEEeecCC-CCCCcCcceEeCC-CEEEEECCCCcEEEEEC
Confidence 2779999997 4666666653 3344444556665 47777899999999999
Q ss_pred CCCC
Q psy4510 442 AVER 445 (812)
Q Consensus 442 ~~~~ 445 (812)
.+++
T Consensus 506 ~tG~ 509 (677)
T 1kb0_A 506 ATGE 509 (677)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 9884
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.5e-08 Score=102.92 Aligned_cols=183 Identities=11% Similarity=-0.012 Sum_probs=98.1
Q ss_pred CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc
Q psy4510 234 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 234 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 313 (812)
++..+++++.++.|..||..++ +.+.++.. +.+.+..+..++ .++++++.||.|+.||..+++. ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-------~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~----~w 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-------SIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEG----LT 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-------CEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CC----SE
T ss_pred eCCEEEEEcCCCEEEEEECCCC-------CEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCce----ee
Confidence 4678899999999999999986 66666665 445555555565 5778888999999999987763 11
Q ss_pred cccCCCC-CEE-EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 314 PLVGHTN-SVE-DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 314 ~~~~h~~-~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
.+..+.. .+. ...+. .+. .+++++.++.|+.||.++++. +..+ ..+. ...++|.+..+++++.++.|+
T Consensus 74 ~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~---~w~~-~~~~----~~~~~p~~~~v~~~~~dg~v~ 143 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEK---QQTL-SSAF----ADSLSPSTSLLYLGRTEYTIT 143 (369)
T ss_dssp ECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEE
T ss_pred eeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcE---EEEe-cCCC----cccccccCCEEEEEecCCEEE
Confidence 1111100 000 00111 233 477888899999999986543 3333 2221 234566778899999999999
Q ss_pred EEecCCCCCCCceEEcccCCCCEEEEEEccCC--CcEEEEEECCCCEEEEEcCCCC
Q psy4510 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE--SSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 392 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.||.++ ++.+..+..+. .....+.++. ...+++++.+|.|..||..+++
T Consensus 144 a~d~~t---G~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 144 MYDTKT---RELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCCSSS---SSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EEECCC---CCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 999984 44444433211 1222333321 0356778889999999998773
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.41 E-value=5.9e-05 Score=76.77 Aligned_cols=233 Identities=9% Similarity=-0.019 Sum_probs=136.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC--ceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~ 254 (812)
.....++|+| +++++++-..++.|..||...... ... ........+++.++++++++..... .|..++..+
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~---~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ---IHA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE---EEE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE---EEE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4567899999 999888887889999998765321 111 1224688999999999655543332 355566555
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee-ccc-----cccCCCCCEEEEEEc
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-DQK-----PLVGHTNSVEDLQWS 328 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~-----~~~~h~~~v~~~~~~ 328 (812)
+ ....+..+ ........++..+.+ ..+++-...+.|.++|...+..... ... ...+.-...+.+ +
T Consensus 105 g-----~~~~~~~~-~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 105 G-----TVETLLTL-PDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp S-----CEEEEEEC-TTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred C-----eEEEEEeC-CCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 4 11111111 112233455555543 3445444588899998765321000 000 011112245556 7
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc--eEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~ 406 (812)
|+++.++++-...+.|..+++...........+.. ......+++.++|+++++....+.|.++|.. ++. +..
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~----G~~~~~~~ 249 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD----RSTTIIAQ 249 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT----CCEEEEEC
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC----CCEEEEee
Confidence 88887777777889999999874111111111101 1235668899999887777778899999974 333 223
Q ss_pred cccCCCCEEEEEEc---cCCCcEEEEEE
Q psy4510 407 FKHHTAPVTTVEWH---PTESSTFASGG 431 (812)
Q Consensus 407 ~~~h~~~v~~v~~~---p~~~~~l~s~~ 431 (812)
+.......++++|. |++..++++..
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccccCCceEEEEecccCCCCEEEEECC
Confidence 44334568999998 77654444433
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=0.007 Score=67.64 Aligned_cols=199 Identities=12% Similarity=0.015 Sum_probs=127.9
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~ 254 (812)
...+..++|++.++.+.++-..++.|+.+++..... ...+..-......||+.+.+..|..+. ..+.|.+.++..
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 355788999995566666777788999998876432 112222224577899988777665554 567888888875
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. .....+...-....+|++.|.. +.|..... .+.|...++..... ..+...-...+.|++.++++
T Consensus 112 ~-------~~~~l~~~~l~~P~~iavdp~~-G~lY~tD~g~~~~I~r~~~dG~~~-----~~l~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 112 Q-------HRQVLVWKDLDSPRALALDPAE-GFMYWTEWGGKPKIDRAAMDGSER-----TTLVPNVGRANGLTIDYAKR 178 (628)
T ss_dssp T-------TCEEEECSSCCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCSC-----EEEECSCSSEEEEEEETTTT
T ss_pred C-------cEEEEEeCCCCCcccEEEccCC-CeEEEeCCCCCCEEEEEeCCCCce-----EEEECCCCCcceEEEccccC
Confidence 3 2212222344567899999976 45555543 46777777765542 12222345788999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.++++-...+.|...|+..... . + + .........+++.. +.++++-...+.|...|...
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~-~-v--~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNR-E-V--I-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-E-E--E-EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred EEEEEECCCCEEEEEcCCCCce-E-E--e-eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 7777777788999999875322 1 2 1 12233456777764 44556655678888888653
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.9e-05 Score=75.78 Aligned_cols=197 Identities=10% Similarity=0.043 Sum_probs=128.2
Q ss_pred CeeeeeEcCCCCcEEEeeC--CCceEEeeCCCCCCCCCCCCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 225 SAEDLQWSDLKTALQTVDD--PFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
....++|++++.+.++.+. ++.|++.|..++ +.+.++.- .......+++. +..+.++.-.++.+.++|
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-------~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-------KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-------CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEE
Confidence 3578999998755455443 678999999986 45555432 12233455555 424555555689999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc----CCCCeEEEEEcCC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA----HTSDVNVISWNRT 377 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~v~~l~~~~~ 377 (812)
..+.+. ...+...... ...++++++.++++- .++.|.++|..+... +..+.-+ .-..++.+.|. +
T Consensus 93 ~~t~~v----~~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v---~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 93 RRTLSN----IKNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTFKL---IKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp TTTTEE----EEEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTCCE---EEEEECEETTEECCCEEEEEEE-T
T ss_pred CCCCcE----EEEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCCcE---EEEEEECCCCcccccceeEEEE-C
Confidence 987752 2333211111 123455777666554 688999999985433 3333211 11247788888 6
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+++....++.|.+.|.. +++.+..+... ......|+|+|++.++++++...+.|.+.++...
T Consensus 162 g~lyvn~~~~~~V~vID~~---tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAK---DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETT---TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECC---CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7666666678899999998 46666665421 1356899999998888888888889999888655
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.30 E-value=4.9e-05 Score=86.42 Aligned_cols=200 Identities=11% Similarity=0.092 Sum_probs=110.9
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCC-----------CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-----------NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-----------~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
+..|++++.++.|.-+|..+++.. -...... .....+++ .+..|+.++.++.|..+|..++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~----W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG-- 148 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRI----WTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATG-- 148 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEE----EEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTC--
T ss_pred CCEEEEECCCCeEEEEECCCCcEE----EEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCC--
Confidence 344555555677777777766531 1111100 00122333 4567888889999999999987
Q ss_pred CCCCCCCceEEcCC-C-CcEEEEEecC--CCCCEEEEEeC------CCcEEEEeCCCCCc-ceecccccc----------
Q psy4510 258 PGIPTPPLFSFSGH-L-TEGFAMDWSS--TEPGVLATGDC------KRNIHIWTPREAGA-WQVDQKPLV---------- 316 (812)
Q Consensus 258 ~~~~~~~~~~~~~h-~-~~v~~l~~sp--~~~~~l~sg~~------dg~i~vwd~~~~~~-~~~~~~~~~---------- 316 (812)
+.+..+..+ . .....+.-+| .+ +.++.++. +|.|+.+|..+++. |......-.
T Consensus 149 -----~~~W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~ 222 (677)
T 1kb0_A 149 -----KEVWHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESM 222 (677)
T ss_dssp -----CEEEEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHH
T ss_pred -----CEEeeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccc
Confidence 555555543 1 0000011111 12 45555543 68999999998874 222110000
Q ss_pred -----------------CCCCCEEEEEEcCCCCeEEEEEECCC-------------------eEEEEECCCCCcccceee
Q psy4510 317 -----------------GHTNSVEDLQWSPGEKRVLASCSVDL-------------------SIRIWDTRVINTKSCMLT 360 (812)
Q Consensus 317 -----------------~h~~~v~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~ 360 (812)
+.......+++.|++. +++.++.++ .|..+|.++++.......
T Consensus 223 ~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~ 301 (677)
T 1kb0_A 223 KRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE 301 (677)
T ss_dssp HHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred ccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec
Confidence 1112224678888887 466666553 599999986543322221
Q ss_pred cCCcC-------CCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 361 LPNAH-------TSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 361 ~~~~~-------~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
..| ......+....+| ..++.++.+|.|+++|.+ +++.+..+.
T Consensus 302 --~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~---tG~~l~~~~ 354 (677)
T 1kb0_A 302 --TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT---NGKFISAKN 354 (677)
T ss_dssp --STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEE
T ss_pred --CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC---CCCEecccc
Confidence 112 1223333444467 589999999999999998 466665543
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.29 E-value=9.6e-06 Score=87.46 Aligned_cols=97 Identities=6% Similarity=0.001 Sum_probs=64.7
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE-c-CCCCEEEEEe------------------CCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW-N-RTEPLIVSGG------------------DDG 388 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~-~-~~~~~l~sg~------------------~dg 388 (812)
++|++++++...++.|.+.|+.+.+....+ .++ .......+++ . |++.++++++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii-~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAIL-EIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEE-ECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEE-eCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 378877887778889999999954332222 442 2345788887 4 8999888874 245
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
.+.+.|.. +.+.+.++.--. .-..++++|++. ++++++.+
T Consensus 176 ~vtvID~~---t~~v~~qI~Vgg-~pd~~~~spdGk-~~~vt~~~ 215 (595)
T 1fwx_A 176 VFTAVDAD---KWEVAWQVLVSG-NLDNCDADYEGK-WAFSTSYN 215 (595)
T ss_dssp EEEEEETT---TTEEEEEEEESS-CCCCEEECSSSS-EEEEEESC
T ss_pred eEEEEECC---CCeEEEEEEeCC-CccceEECCCCC-EEEEEecC
Confidence 78999997 345555554322 335678999874 66666644
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=0.012 Score=65.77 Aligned_cols=225 Identities=8% Similarity=-0.039 Sum_probs=127.9
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
...|+.-++..... ....+...-....+|+|++.+..|.-+. ..+.|..+++... ......+........
T Consensus 17 ~~~I~~i~~~~~~~---~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~------~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 17 RRDLRLVDATNGKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT------ESVQNVVVSGLLSPD 87 (619)
T ss_dssp SSBEEEECCC------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCEE
T ss_pred cccEEEEeCCCCcc---eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC------CceEEEEeCCCCCcC
Confidence 35788888875421 1122223344578999999877777665 4577888887653 112223333335678
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTK 355 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~ 355 (812)
.|++.+.+..+.++-...+.|.+.++...... ......-....+|++.|.+..++++-- ..+.|...++....
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~----~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-- 161 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRK----VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-- 161 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEE----EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc--
Confidence 89999876355566666789999998765321 111133445789999998776666542 24667777765321
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
...+....-...+.|++++.+..|+.+ ...+.|...|+.. .....+ .+......+|++..+ .++++-...
T Consensus 162 --~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG----~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~ 233 (619)
T 3s94_A 162 --RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG----TNRQAVVKGSLPHPFALTLFED--ILYWTDWST 233 (619)
T ss_dssp --CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC----CEEC---------CCCEEESSS--EEEEECTTT
T ss_pred --eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC----CccEEEEeCCCCCceEEEEeCC--EEEEecCCC
Confidence 111112234567899999876654444 4567888888863 111111 111112245666543 455555567
Q ss_pred CCEEEEEcCCCC
Q psy4510 434 DQIALWDLAVER 445 (812)
Q Consensus 434 g~v~iwd~~~~~ 445 (812)
+.|...|..+++
T Consensus 234 ~~V~~~d~~tg~ 245 (619)
T 3s94_A 234 HSILACNKYTGE 245 (619)
T ss_dssp CSEEEEESSSCC
T ss_pred CEEEEEECCCCc
Confidence 789998887654
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=2.2e-05 Score=76.58 Aligned_cols=199 Identities=10% Similarity=0.052 Sum_probs=125.6
Q ss_pred ceEEEEeCCCCCCeEEEecC--CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKR 254 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~--dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~ 254 (812)
....++|+| ++.+.++.+. ++.|++.|+.+++.... ..+..+.. ...+++. ++.|..+ -.++.+.++|..+
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~--i~l~~~~f-geGi~~~--g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENI--HKMDDSYF-GEGLTLL--NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEE--EECCTTCC-EEEEEEE--TTEEEEEETTCSEEEEEETTT
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEE--EecCCCcc-eEEEEEe--CCEEEEEEecCCEEEEEECCC
Confidence 357899999 7766665543 57999999999874321 11222222 2245544 5555544 4688999999987
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCe
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~ 333 (812)
. +.+.++..-...... +++++ ..|+++..++.|.++|..+.+.......... ..-..++.+.|. ++.
T Consensus 96 ~-------~v~~~i~~g~~~g~g--lt~Dg-~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~- 163 (266)
T 2iwa_A 96 L-------SNIKNFTHQMKDGWG--LATDG-KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE- 163 (266)
T ss_dssp T-------EEEEEEECCSSSCCE--EEECS-SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-
T ss_pred C-------cEEEEEECCCCCeEE--EEECC-CEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-
Confidence 4 566666432233334 45577 4455555688999999988763111111000 111246788888 564
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCc------------CCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNA------------HTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~ 397 (812)
+++....++.|.+.|..++.. +..+... .....+.|+|+|+++ +++++...+.|.+.++..
T Consensus 164 lyvn~~~~~~V~vID~~tg~V---~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTL---LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCE---EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcE---EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 677776789999999986543 3333111 113569999999987 777777889999999874
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2.5e-05 Score=75.11 Aligned_cols=184 Identities=10% Similarity=0.125 Sum_probs=112.3
Q ss_pred eeeeeEcCCCCcEEEeeCCC--ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPF--QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
...|.|+ ++.+..+.+.+| .|+++|+.++ +.+.++.-. ...+.....+.+..+.+..-.++.+.++|..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg-------kv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESG-------KTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTC-------CEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCC-------cEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 4678998 666666777665 8999999986 555555432 2333322333343455555568999999999
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC-CCeEEEEEcCCCCEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT-SDVNVISWNRTEPLIV 382 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~ 382 (812)
+.+ ....+.... .-..++ ++++.++++ ..++.|.++|..+......+..-..+.. ..++.+.|. +|.+++
T Consensus 116 t~~----~~~ti~~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 116 NLR----QVRSFNYDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp TCC----EEEEEECSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred cCc----EEEEEECCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 887 333333211 112333 566755555 4478899999985443322221111111 446677886 676666
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccC------------CCCEEEEEEccCCCcEEEEE
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHH------------TAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h------------~~~v~~v~~~p~~~~~l~s~ 430 (812)
..-.+..|.+.|.+ +++.+..+... ....+.|+|+|++.+++++|
T Consensus 187 n~w~~~~I~vIDp~---tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 187 NVWQTNKIVRIDPE---TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EETTSSEEEEECTT---TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEccCCeEEEEECC---CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 66678899999998 46665554321 23568999999876555554
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2.9e-05 Score=83.76 Aligned_cols=239 Identities=8% Similarity=0.008 Sum_probs=147.1
Q ss_pred CCCeEEEe-cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-c-CCCCcEEEee------------------CCCc
Q psy4510 188 EPGVLATG-DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-S-DLKTALQTVD------------------DPFQ 246 (812)
Q Consensus 188 ~~~~lat~-~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-s-~~~~~l~s~~------------------~d~~ 246 (812)
+|++|... ..+++|.+-|+.+.+..... .+. .......+++ + |+++++.+++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii--~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL--EIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE--ECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE--eCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 66666554 55677999999987632111 222 1234778887 5 8999998884 2456
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-------------------------------
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR------------------------------- 295 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg------------------------------- 295 (812)
+.+.|..+. +.+.++.--. .-..++++|++ +++++.+.+.
T Consensus 177 vtvID~~t~-------~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 177 FTAVDADKW-------EVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp EEEEETTTT-------EEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred EEEEECCCC-------eEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 888888763 5555544211 34568899998 6666665432
Q ss_pred -------cEEEEeCCC--CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc--------ccce
Q psy4510 296 -------NIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT--------KSCM 358 (812)
Q Consensus 296 -------~i~vwd~~~--~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~ 358 (812)
.|.|.|..+ +.. ....+. -.....++.++|+|+++++++..+.+|.++|+.+... ...+
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~---~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSL---FTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCS---SEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CCeeEECcEEEEeCcccCCce---eEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 355555554 210 011111 1224567899999999888888899999999984210 0111
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-------CCCCceEEcccCCCCE-----EEEEEccCCCcE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-------KKGSSVATFKHHTAPV-----TTVEWHPTESST 426 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v-----~~v~~~p~~~~~ 426 (812)
... ..-......++|+++|...++...|+.|.+||+... +..+.+.++..|-.+- .++.++|+|. +
T Consensus 324 ~~~-v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk-~ 401 (595)
T 1fwx_A 324 VAE-PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND-W 401 (595)
T ss_dssp EEC-CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS-E
T ss_pred EEE-cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC-E
Confidence 111 123456788999999955556677999999998641 1145666766665432 1224578874 6
Q ss_pred EEEEEC-C-CCE-----------EEEEcCCC
Q psy4510 427 FASGGA-D-DQI-----------ALWDLAVE 444 (812)
Q Consensus 427 l~s~~~-d-g~v-----------~iwd~~~~ 444 (812)
|+++.. . .++ .++|++..
T Consensus 402 l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 402 LVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 666543 2 234 77888655
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0031 Score=65.12 Aligned_cols=240 Identities=11% Similarity=-0.020 Sum_probs=144.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
+...|.+..+ .+.++++-. ..|+..++..... ...+. ....+.+++|.+.+..|..+. ..+.|..+++...
T Consensus 34 d~~~C~~~~~-~~~ll~~~~--~~I~~i~~~g~~~----~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANR--IDIRQVLPHRSEY----TLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp TSSCEEESSS-CCEEEEECB--SCEEEECTTSCCE----EEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCccccccc-CceeEeecc--cceEEEeCCCCee----EEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 3445666556 554554433 3577777765431 11222 234578999998777666554 5678888888763
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
.....+........++++.+.+..+.++-...+.|.+.++..... ...+.........+++.|.+..++
T Consensus 106 -------~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 106 -------NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp -------SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECTTCSCEEEEEEETTTTEEE
T ss_pred -------CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce----EEEEeCCCCCcceEEEecCcCeEE
Confidence 222222222334567888876635556666678899999875432 111222335678999999877677
Q ss_pred EEEECC-CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 336 ASCSVD-LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 336 ~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
++-... +.|...++.... ...+....-...+.|++++++..| ++-...+.|..+|+.. ......+......
T Consensus 175 ~td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG---~~~~~~~~~~~~~ 247 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG---SHRKAVISQGLPH 247 (349)
T ss_dssp EEECSSSCEEEEEETTSCS----CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEECSSCSS
T ss_pred EeccCCCCEEEEEeCCCCC----cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC---CceEEEEeCCCCC
Confidence 776666 889888886321 122212234457899999877644 4445567899999863 1222222223445
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+|++. . ..++++-...+.|..++...+
T Consensus 248 P~giav~-~-~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 248 PFAITVF-E-DSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEEEEE-T-TEEEEEETTTTEEEEEETTTC
T ss_pred ceEEEEE-C-CEEEEecCCCCeEEEEEccCC
Confidence 6778773 2 356666666777888875444
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00073 Score=65.43 Aligned_cols=209 Identities=12% Similarity=0.122 Sum_probs=129.1
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+.+-.+.+.+|+|+|++..++++...++.|...|+. +... ....+.+ ......|++.+++. ++++.-.++.+.++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~--~~i~l~g-~~D~EGIa~~~~g~-~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLI--RTIPLDF-VKDLETIEYIGDNQ-FVISDERDYAIYVI 96 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEE--EEEECSS-CSSEEEEEECSTTE-EEEEETTTTEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEE--EEEecCC-CCChHHeEEeCCCE-EEEEECCCCcEEEE
Confidence 445557899999999874566678888899999987 4411 1112232 35789999998886 55665567889999
Q ss_pred ECCCCCccc--ceeec---CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-------cCCCCEE
Q psy4510 348 DTRVINTKS--CMLTL---PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-------HHTAPVT 415 (812)
Q Consensus 348 d~~~~~~~~--~~~~~---~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-------~h~~~v~ 415 (812)
++....... ....+ ..........|+|+|.++.|+++.......||.+........+..+. .+...+.
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 876433211 11111 12345667999999999866666665555566554211111222221 1334678
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC-------CCceeEEEEcCCCCCEEEE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG-------QKEIKELHWHPQLPGTIIS 488 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~~~~ 488 (812)
+++++|...++++.+...+.|..+|...... ..+....+ ....-.|++.+++. ++++
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~---------------~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv 240 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVGEVI---------------GEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV 240 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCEE---------------EEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCCCEE---------------EEEEcCCccCCcccccCCCCeeEECCCCC-EEEE
Confidence 9999998777777777788888998765411 11111111 12567899999974 5555
Q ss_pred EeCCCeEEE
Q psy4510 489 TANSGFNIF 497 (812)
Q Consensus 489 ~~~~~~~~~ 497 (812)
+..+-+.+|
T Consensus 241 sE~n~~y~f 249 (255)
T 3qqz_A 241 SEPNRFYRF 249 (255)
T ss_dssp ETTTEEEEE
T ss_pred cCCceEEEE
Confidence 544433333
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=0.017 Score=64.61 Aligned_cols=183 Identities=9% Similarity=-0.027 Sum_probs=117.0
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..+.|+..++.+. .....+. ..-....+|+|.+.+..++.+-...+.|+.+++..... ...+......
T Consensus 13 ~~~~I~~i~l~~~-------~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~ 81 (628)
T 4a0p_A 13 RRADIRRISLETN-------NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDY 81 (628)
T ss_dssp ETTEEEEEESSCT-------TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSC
T ss_pred eCCcEEEEECCCC-------CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCC
Confidence 5677888888763 2112111 12356889999998744555656678999999876532 1112222245
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFK 399 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~ 399 (812)
...+++.+.+.+++++-...+.|.+.++..... ..+....-.....|++.|....|+... ..+.|...++.
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~----~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--- 154 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR----QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--- 154 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTC----EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcE----EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC---
Confidence 778999888777777777788999999874221 111123335578999998655444443 35678888875
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+...-.....|++.+.+.++.++-...+.|...|+...
T Consensus 155 -G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 155 -GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp -SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred -CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 33333333344567899999986555555566778999998764
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00024 Score=81.97 Aligned_cols=253 Identities=11% Similarity=0.035 Sum_probs=133.5
Q ss_pred CCCC-ceEEEEeC-CCCCCeEEEec-----CCCcEEEEccCCC-CcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-
Q psy4510 174 GHLT-EGFAMDWS-STEPGVLATGD-----CKRNIHIWTPREA-GAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP- 244 (812)
Q Consensus 174 gh~~-~i~~~~~s-p~~~~~lat~~-----~dg~v~iwd~~~~-~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d- 244 (812)
+|.- .+...+|| | +|++||-+. ...+|+++|+.++ +.. ...+ ......++|+||++.|+....+
T Consensus 170 ~~~~~~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---~~~~---~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTI---ADKV---SGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp TCSCCEEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCC---CCCE---EEECSCCEECSSTTEEEEEEECT
T ss_pred CCCeEEEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeC---Cccc---cCceeeEEEecCCCEEEEEEECC
Confidence 4443 67789999 9 999888442 2235999999887 521 1111 1124578999999988877654
Q ss_pred ----CceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccC
Q psy4510 245 ----FQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 245 ----~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
..|.++++.++ .......+. .+......+.|+|++..++++... ...|+++|+.++............
T Consensus 243 ~~~~~~v~~~~lgt~-----~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 243 TLRENKVWRHVMGKL-----QSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR 317 (751)
T ss_dssp TCCEEEEEEEETTSC-----GGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC
T ss_pred CCCCCEEEEEECCCC-----chhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC
Confidence 25777777653 111223332 223456788999999444444432 346888888765311100111223
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECC----CeEEEEECCCCCcccc-eeecCCcCCC--CeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVD----LSIRIWDTRVINTKSC-MLTLPNAHTS--DVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~-~~~~~~~~~~--~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
.......+.|+. ++.+++....+ ..|..+++........ + + .+.. .+..+++. .+.++++...+|..
T Consensus 318 ~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~l--i--~~~~~~~l~~~~~~-~~~lv~~~~~~g~~ 391 (751)
T 2xe4_A 318 EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVL--V--DHSEDVFMESIAVR-SNYLVVAGRRAGLT 391 (751)
T ss_dssp CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEE--E--CCCSSEEEEEEEEC-SSEEEEEEEETTEE
T ss_pred CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeE--E--CCCCCcEEEEEEEE-CCEEEEEEEeCCEE
Confidence 344556666654 55455555544 3566667653211111 1 1 2223 34556655 23466777777765
Q ss_pred E--EEecCC----CCCCCceEEcccC-CCCEEEEEE----ccCCCcEEEEEECC---CCEEEEEcCCC
Q psy4510 391 H--VWDLRR----FKKGSSVATFKHH-TAPVTTVEW----HPTESSTFASGGAD---DQIALWDLAVE 444 (812)
Q Consensus 391 ~--iwd~~~----~~~~~~~~~~~~h-~~~v~~v~~----~p~~~~~l~s~~~d---g~v~iwd~~~~ 444 (812)
+ ++++.. ...+..+..+... ...+..+.+ ++++..++++.+.. ..+..+|+.+.
T Consensus 392 ~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 392 RIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp EEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred EEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 4 455410 0122213333211 122444443 34555566665543 34666666554
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=0.0013 Score=67.17 Aligned_cols=200 Identities=10% Similarity=0.032 Sum_probs=119.1
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC--------------------CCCcEEEEEecCC
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--------------------HLTEGFAMDWSST 283 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~l~~sp~ 283 (812)
....+++|.++++.+.++..++.|..|+..++ .+..+.. ......++++.++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS--------GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTT--------CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCC--------ceEEEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 34567888899988888888899999987653 1222211 1135789999983
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcC-CCCeEEEEEEC-----------------CCeE
Q psy4510 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSP-GEKRVLASCSV-----------------DLSI 344 (812)
Q Consensus 284 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p-~~~~~l~s~~~-----------------dg~i 344 (812)
+ +.|..++..+.|..++..++.. ........+ .....+++++.+ +|. +.++... ++.|
T Consensus 91 ~-g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 91 N-NQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp T-TEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred C-CcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceE
Confidence 3 4566665556688888765421 111111111 123578999999 887 5555432 3678
Q ss_pred EEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
..+|..+... ..+ .......+.|+++++++.|+.+ ...+.|.+|++.....+. ...+....+ ...+++.++|
T Consensus 168 ~~~d~~~~~~----~~~-~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 168 IKYDPSTKET----TLL-LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp EEEETTTTEE----EEE-EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEECTTS
T ss_pred EEEeCCCCEE----EEe-ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEECCCC
Confidence 8888763321 111 1112345679999999855544 566899999987421111 122211223 7889999987
Q ss_pred CcEEEEEEC----------CCCEEEEEcC
Q psy4510 424 SSTFASGGA----------DDQIALWDLA 442 (812)
Q Consensus 424 ~~~l~s~~~----------dg~v~iwd~~ 442 (812)
. +.++... .+.|..+|..
T Consensus 241 ~-l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 241 H-FWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp C-EEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred C-EEEEecCcccccccCCCccEEEEECCC
Confidence 4 5555433 3557777754
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0098 Score=61.34 Aligned_cols=181 Identities=10% Similarity=-0.002 Sum_probs=115.2
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
...|+..++... ....+........+++|.+....++.+-...+.|+.+++..... ............
T Consensus 52 ~~~I~~i~~~g~--------~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p~ 119 (349)
T 3v64_C 52 RIDIRQVLPHRS--------EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESPG 119 (349)
T ss_dssp BSCEEEECTTSC--------CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCC
T ss_pred ccceEEEeCCCC--------eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc----eEEEeCCCCCcc
Confidence 345777776542 22333333455889999987634555555678899999876542 111222234567
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCC-CcEEEEecCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDD-GCIHVWDLRRFKKG 401 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d-g~i~iwd~~~~~~~ 401 (812)
.+++.+.+.+++++-...+.|.+.++..... ..+....-...+.+++.|.+. ++++-... +.|..+++. +
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d----G 191 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD----G 191 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT----S
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCce----EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC----C
Confidence 8999987776777777788999999874221 112123345678999998665 44454444 788888885 3
Q ss_pred CceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+. ..-.....|+++|.+..+.++-...+.|..+|+...
T Consensus 192 ~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 192 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3333332 233456899999877656666566778999998754
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.10 E-value=0.0024 Score=67.06 Aligned_cols=238 Identities=11% Similarity=-0.024 Sum_probs=142.5
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~ 257 (812)
..|.+..+ .+.++++.. ..|+..++..... . .+......+.+++|.+.+..|..+. ..+.|..+++...
T Consensus 79 ~~C~~~~~-~~~l~~~~~--~~I~~i~~~~~~~----~-~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~-- 148 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANR--IDIRQVLPHRSEY----T-LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-- 148 (386)
T ss_dssp SCEEECSS-CCEEEEECB--SCEEEECTTSCCC----E-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--
T ss_pred CeECCccc-cceeEeecC--ccceeeccCCCcE----E-EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC--
Confidence 34555555 444444433 4688888776542 1 1222334578999998776666554 5678888888763
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.....+.........|++.+.+..+.++-...+.|.+.++..... ...+.........+++.|.+..++++
T Consensus 149 -----~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~----~~l~~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 149 -----NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp -----CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC----EEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred -----CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce----EEeecCCCCCCcEEEEEcCCCeEEEe
Confidence 211222222234567888876635556656677888888875431 11122233567999999988877776
Q ss_pred EECC-CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 338 CSVD-LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 338 ~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
-... +.|...++.... ...+....-...+.|+++|++..| ++-+..+.|..+|+.. ......+........
T Consensus 220 d~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG---~~~~~~~~~~~~~P~ 292 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG---SHRKAVISQGLPHPF 292 (386)
T ss_dssp ECSSSCEEEEEETTSCS----CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS---CSCEEEECSSCSSEE
T ss_pred ccCCCCEEEEEeCCCCC----cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC---CeeEEEEECCCCCce
Confidence 6555 788888876321 111212233457899999876644 4445567899999863 222222232344567
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|++. . ..++++-...+.|..++...+
T Consensus 293 giav~-~-~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 293 AITVF-E-DSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEEE-T-TEEEEEETTTTEEEEEETTTC
T ss_pred EEEEE-C-CEEEEeeCCCCeEEEEECCCC
Confidence 78873 3 356666666778888885444
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00013 Score=70.17 Aligned_cols=183 Identities=9% Similarity=-0.013 Sum_probs=114.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~~~ 257 (812)
...+.|+. +.+..+.+.+|.|+++|+.+++..... +.. ........++++.|..+ -.++.+.++|..+.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~---~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl-- 126 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME---RLG---NIFAEGLASDGERLYQLTWTEGLLFTWSGMPP-- 126 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE---ECT---TCCEEEEEECSSCEEEEESSSCEEEEEETTTT--
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE---CCC---CcceeEEEEeCCEEEEEEccCCEEEEEECCcC--
Confidence 45777754 567778888899999999998843222 222 23332222345555444 47899999999885
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC---CCEEEEEEcCCCCeE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT---NSVEDLQWSPGEKRV 334 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~ 334 (812)
+.+.++.. ..+.++|+ +++ ..|+.+..++.|.++|..+.+..... ....+. ..++.+.|. +|. +
T Consensus 127 -----~~~~ti~~-~~eGwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I--~V~~~g~~v~~lNeLe~~-dG~-l 193 (268)
T 3nok_A 127 -----QRERTTRY-SGEGWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAV--QVKLRGQPVELINELECA-NGV-I 193 (268)
T ss_dssp -----EEEEEEEC-SSCCCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEE-TTE-E
T ss_pred -----cEEEEEeC-CCceeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEE--EeCCCCcccccccccEEe-CCE-E
Confidence 66667664 34445565 456 56666667899999999887632111 111122 245778887 564 7
Q ss_pred EEEEECCCeEEEEECCCCCcccceee--c-------CCcCCCCeEEEEEcCCCC-EEEEE
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLT--L-------PNAHTSDVNVISWNRTEP-LIVSG 384 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~--~-------~~~~~~~v~~l~~~~~~~-~l~sg 384 (812)
++....+..|.+.|.+++.-...+.. + ......-.+.|+|+|+++ +++||
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 77776788999999986543221111 0 011224579999999876 55555
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00016 Score=69.48 Aligned_cols=184 Identities=8% Similarity=0.016 Sum_probs=114.3
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~ 305 (812)
...|.|+ .+.+..+.+.+|.|+++|++++ +.+..+....--...+++. +..+.+..-.++.+.++|..+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tg-------kv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESA-------QPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCS-------SCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCC-------cEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcC
Confidence 4577886 3566677778888999999987 4455542111122335554 4356666667899999999987
Q ss_pred CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCCCCEEEEE
Q psy4510 306 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg 384 (812)
+. ...+... ..-..++ ++++.++++ ..++.|.++|..+......+..-.. ..-..++.+.|. +|.+++..
T Consensus 127 ~~----~~ti~~~-~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 127 QR----ERTTRYS-GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EE----EEEEECS-SCCCCEE--EETTEEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred cE----EEEEeCC-CceeEEe--cCCCEEEEE-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 62 3333221 1123444 457754554 4689999999986443322221101 111245778887 67666666
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccC-------------CCCEEEEEEccCCCcEEEEEE
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHH-------------TAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~s~~ 431 (812)
-.+..|.+.|.+ +++.+..+... ..-.+.|+++|++.+++++|-
T Consensus 198 w~s~~I~vIDp~---TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 WHSSDVLEIDPA---TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCSEEEEECTT---TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCeEEEEeCC---CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 578899999998 46655554321 235689999998877777663
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.09 E-value=0.00018 Score=81.88 Aligned_cols=116 Identities=15% Similarity=0.108 Sum_probs=68.4
Q ss_pred EEEEcC-CCCeEEEEEECCC-----------eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcE
Q psy4510 324 DLQWSP-GEKRVLASCSVDL-----------SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCI 390 (812)
Q Consensus 324 ~~~~~p-~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i 390 (812)
.+++.| +++ +++.|+.+. .+.+||..+.. ...+..+...+.....++++..++.+++.|+. ++.+
T Consensus 190 ~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 556677 555 788877543 58899988643 22223332334444456778889999999884 5689
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CC-----CCEEEEEcCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG-AD-----DQIALWDLAVE 444 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~d-----g~v~iwd~~~~ 444 (812)
.+||..... ...+..+..... -.+++..+++ ++++.|| .+ ..+.+||..+.
T Consensus 268 ~~yd~~t~~-W~~~~~~~~~R~-~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSDS-WIPGPDMQVARG-YQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGTE-EEECCCCSSCCS-SCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCCc-eeECCCCCcccc-ccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 999987421 111111221111 1344555665 5788887 34 45777777654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.07 E-value=0.0092 Score=62.53 Aligned_cols=182 Identities=10% Similarity=-0.009 Sum_probs=115.0
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+........+++|.+.+..++.+-...+.|+.+++..... ...+.......
T Consensus 94 ~~~~I~~i~~~~~--------~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p 161 (386)
T 3v65_B 94 NRIDIRQVLPHRS--------EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESP 161 (386)
T ss_dssp CBSCEEEECTTSC--------CCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE----EEEECSSCSCC
T ss_pred cCccceeeccCCC--------cEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc----EEEEeCCCCCc
Confidence 3456777777653 22333333456889999987634555555678899999876542 11122222345
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCC-CcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDD-GCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~d-g~i~iwd~~~~~~ 400 (812)
..+++.+.+..++++-...+.|.+.++.... ...+........+.|++.|.+..|+ +-... +.|..+++..
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~----~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--- 234 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--- 234 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCS----CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS---
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc----eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC---
Confidence 7889998777677777778889888876321 1112123335678999998766444 44344 7788888852
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+ ...-.....|+|+|.+..+.++-+..+.|..+|+...
T Consensus 235 -~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 235 -SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp -CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred -CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 222222 2233457899999877666666666778999988654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.02 E-value=9.7e-05 Score=71.04 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=118.2
Q ss_pred CCccCcCCCCCc--eEEEEeCCCCCCeEEEecCCC--cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 167 PPLFSFSGHLTE--GFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 167 ~~i~~~~gh~~~--i~~~~~sp~~~~~lat~~~dg--~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
+.+..+ .|... ...+.|+ ++.+..+.|.+| .|+++|+.+++..... .+. .........++++.|..+.
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~--~l~---~~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQI--ELG---KRYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEE--ECC---TTCCEEEEEEETTEEEEEE
T ss_pred EEEEEe-cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEE--ecC---CccceeEEEEeCCEEEEEE
Confidence 344444 45443 4678886 456666777665 8999999998743211 122 2333322333455555554
Q ss_pred -CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC-C
Q psy4510 243 -DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-N 320 (812)
Q Consensus 243 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~-~ 320 (812)
.++.+.++|..+. +.+.++.. ......++ +++ ..|+.++.++.|.++|..+.+..........+.. .
T Consensus 104 w~~~~v~v~D~~t~-------~~~~ti~~-~~eG~glt--~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 104 WKNGLGFVWNIRNL-------RQVRSFNY-DGEGWGLT--HND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp SSSSEEEEEETTTC-------CEEEEEEC-SSCCCCEE--ECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred eeCCEEEEEECccC-------cEEEEEEC-CCCceEEe--cCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 6889999999885 66777764 23444555 456 4555555578899999988763211111111111 3
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--cC------CcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--LP------NAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~------~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
.++.+.|. +|. +++..-.+..|.+.|.+++.-...+.. +. .....-.+.|+|+|+++.|+..+.
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 45678887 564 777776788999999986543221111 00 011235699999999885555553
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.99 E-value=0.012 Score=60.14 Aligned_cols=240 Identities=10% Similarity=0.087 Sum_probs=126.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+.++.|.+ .+..+|+| ..|.| +...+.++.+.............+.+|+|.+ +. +..++..+.|.. ..+.+.
T Consensus 36 ~~~~~v~~~~-~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 36 ATILDMSFID-RHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SCEEEEEESS-SSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CcEEEEEECC-CCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 4689999987 77777755 46655 3334445544333222223455789999986 44 444455564443 222221
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
..+.+.....+.+.+..+.+.+++ ..++.+ .+|.|.. ....+..|.... ..+...+..+.+.|++. +++
T Consensus 110 ----tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~tW~~~~---~~~~~~~~~~~~~~~~~-~~~ 178 (327)
T 2xbg_A 110 ----SWSQIPLDPKLPGSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGKNWQALV---QEAIGVMRNLNRSPSGE-YVA 178 (327)
T ss_dssp ----SCEECCCCTTCSSCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTSSEEEEE---CSCCCCEEEEEECTTSC-EEE
T ss_pred ----CceECccccCCCCCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCCCCEEee---cCCCcceEEEEEcCCCc-EEE
Confidence 111111111233457788877665 455555 4565432 223344454432 23456789999999876 455
Q ss_pred EEECCCeEEE-EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc-ccCCCCE
Q psy4510 337 SCSVDLSIRI-WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPV 414 (812)
Q Consensus 337 s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v 414 (812)
.+ ..|.+.. +|-. +..-..+ .......+..+.+.+++.+++. +.+|.+.+.+....++-..+..- ..+...+
T Consensus 179 ~g-~~G~~~~S~d~g-G~tW~~~---~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~ 252 (327)
T 2xbg_A 179 VS-SRGSFYSTWEPG-QTAWEPH---NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGF 252 (327)
T ss_dssp EE-TTSSEEEEECTT-CSSCEEE---ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCE
T ss_pred EE-CCCcEEEEeCCC-CCceeEC---CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcce
Confidence 54 4454443 3321 1122222 1234567899999998876544 45787777642110011111110 0123458
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.++.+.+++ .++++ +.++.| ++...
T Consensus 253 ~~v~~~~~~-~~~~~-g~~g~i-~~S~D 277 (327)
T 2xbg_A 253 LDLAYRTPN-EVWLA-GGAGAL-LCSQD 277 (327)
T ss_dssp EEEEESSSS-CEEEE-ESTTCE-EEESS
T ss_pred EEEEecCCC-EEEEE-eCCCeE-EEeCC
Confidence 899998864 45554 456766 34333
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0075 Score=58.31 Aligned_cols=207 Identities=12% Similarity=0.169 Sum_probs=128.8
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEE-eeCCCceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQT-VDDPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+.+.+-...+..++|+|++..|.+ ...++.|...|.. + +.+.++. +-.....+|++.+++ .++++.-.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-------~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~ 90 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-------DLIRTIPLDFVKDLETIEYIGDN-QFVISDERD 90 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C-------CEEEEEECSSCSSEEEEEECSTT-EEEEEETTT
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-------CEEEEEecCCCCChHHeEEeCCC-EEEEEECCC
Confidence 466676678999999998776665 5577788888876 3 4444442 112567889998887 565665567
Q ss_pred CcEEEEeCCCCCc-ceecccc--c--cCCCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCcccceeec------C
Q psy4510 295 RNIHIWTPREAGA-WQVDQKP--L--VGHTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINTKSCMLTL------P 362 (812)
Q Consensus 295 g~i~vwd~~~~~~-~~~~~~~--~--~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~------~ 362 (812)
+.+.++++..... +...... + .........|+|.|.++.++++.-.+. .|..|+ .......+... .
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQR 168 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHH
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhcc
Confidence 8899998876653 1111111 1 123456799999999987666555544 455554 11011111111 0
Q ss_pred CcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCC---------CCEEEEEEccCCCcEEEEEEC
Q psy4510 363 NAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT---------APVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..+...+.+++++|... +++....++.|.++|.. ++.+..+.-.. ..--.|+|.++| ++.+ .+.
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~lyI-vsE 242 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-NIYI-VSE 242 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-CEEE-EET
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCCcccccCCCCeeEECCCC-CEEE-EcC
Confidence 12345688999999765 66667777889999985 44544443221 256899999997 4444 466
Q ss_pred CCCEEEEE
Q psy4510 433 DDQIALWD 440 (812)
Q Consensus 433 dg~v~iwd 440 (812)
-+.+..+.
T Consensus 243 ~n~~y~f~ 250 (255)
T 3qqz_A 243 PNRFYRFT 250 (255)
T ss_dssp TTEEEEEE
T ss_pred CceEEEEE
Confidence 66555543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0018 Score=69.04 Aligned_cols=245 Identities=10% Similarity=0.040 Sum_probs=139.1
Q ss_pred CceEEEEeCCC--CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEE
Q psy4510 177 TEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF-----QLAE 249 (812)
Q Consensus 177 ~~i~~~~~sp~--~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~v 249 (812)
+....++|+|. ++++.++-.. +.|+.++..++. ...+.........++|+++++ |..+...+ .+..
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~-----v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY-----VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE-----EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCE-----EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 45678999983 2555554443 889999986654 223333445688999999999 55444321 1233
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.+...+ ......+. .......+++.|....+.++-..++.|+.++..++..... ... .+....-..++|+|
T Consensus 212 ~~~~~~------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~-~~~-~~~~~~~~~ia~dp 282 (433)
T 4hw6_A 212 FTRASG------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE-EVM-MDTKGSNFHIVWHP 282 (433)
T ss_dssp ECGGGT------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE-EEE-CSCCSSCEEEEECT
T ss_pred EECCCC------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE-Eec-cCCCCCcccEEEeC
Confidence 332221 11111221 2234567889994425555555677899999876542000 111 11122335799999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCc-ccceeecC--------------CcCCCCeEEEEE---------cCCCCEEEEEe
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINT-KSCMLTLP--------------NAHTSDVNVISW---------NRTEPLIVSGG 385 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~--------------~~~~~~v~~l~~---------~~~~~~l~sg~ 385 (812)
+++.++++-...+.|+.++...... ......+. .+.-.....+++ .+++.++++-.
T Consensus 283 dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 283 TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 9987677777788999988652111 00000110 001123567888 67777777777
Q ss_pred CCCcEEEEecCCCCCCCceEEcccC------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHH------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..+.|+.++.. + .+.++.+. -.....|++.|.+..++++=...++|+.++++
T Consensus 363 ~n~~I~~~~~~----G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 363 DSHTVRVLTPE----G-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEECTT----S-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEECCC----C-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 77889998852 3 23332211 12367889984444565655566788887764
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.0004 Score=66.17 Aligned_cols=185 Identities=11% Similarity=0.063 Sum_probs=111.8
Q ss_pred CeeeeeEcCCCCcEEEeeCC--CceEEeeCCCCCCCCCCCCCceEEcCCCC-cEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 225 SAEDLQWSDLKTALQTVDDP--FQLAEHNKKRGKGPGIPTPPLFSFSGHLT-EGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
-...|.|++ +.+..+.+.. ..|+++|+.++ +.+.++.-... -...++.. +..+....-.++.+.++|
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg-------kv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETG-------RILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCC-------CEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 455788876 5555666654 48999999986 55555443221 22344443 425555566789999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc-CCCCeEEEEEcCCCCE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA-HTSDVNVISWNRTEPL 380 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~ 380 (812)
..+.+ ....+... ..-..++ +++..+++|- .++.|.++|..+......+..-..+ .-..++-+.|. +|.+
T Consensus 92 ~~tl~----~~~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 92 LATLT----PRARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp TTTTE----EEEEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred CCcCc----EEEEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 98876 33333321 1224444 4566555554 5889999999864432222211011 11346777776 6666
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEccc-------------CCCCEEEEEEccCCCcEEEEEE
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKH-------------HTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
++..-.+..|.+.|.+ +++.+..+.. -....+.|+++|.+.+++++|-
T Consensus 163 yanvw~s~~I~vIDp~---tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPA---SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTT---TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECC---CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6666567899999998 4555555431 1235689999998766666653
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=97.92 E-value=0.004 Score=63.69 Aligned_cols=237 Identities=9% Similarity=0.028 Sum_probs=128.8
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+.++.|.| +..++. +..|.|.. ..+.++.+.... ....+...+..+++.++++.++.+. ++.|.. ..+.+.
T Consensus 80 ~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 80 YRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIP-LDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGK 152 (327)
T ss_dssp CEEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECC-CCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTS
T ss_pred ccEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECc-cccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCC
Confidence 3577888876 344444 44564443 333344433221 1112345577888877777666554 454322 111221
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.=.....++...+.++++.|++ .+++.+. .|.+..-.-..+..|.... ......+..+.+.+++. +.
T Consensus 153 ------tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG~tW~~~~---~~~~~~~~~~~~~~~g~--~~ 219 (327)
T 2xbg_A 153 ------NWQALVQEAIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQTAWEPHN---RTTSRRLHNMGFTPDGR--LW 219 (327)
T ss_dssp ------SEEEEECSCCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTCSSCEEEE---CCSSSCEEEEEECTTSC--EE
T ss_pred ------CCEEeecCCCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCCCceeECC---CCCCCccceeEECCCCC--EE
Confidence 1111223455678999999986 5666654 4555443211133343321 23456789999999886 44
Q ss_pred EEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCC
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTA 412 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~ 412 (812)
.++.+|.+++.+...+.+-..+ ... ..+...+.++.+.+++.++++|. +|.| .+... .+..-..+. ....
T Consensus 220 ~~~~~G~~~~s~~D~G~tW~~~-~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~D---gG~tW~~~~~~~~~~~ 293 (327)
T 2xbg_A 220 MIVNGGKIAFSDPDNSENWGEL-LSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQD---GGQTWQQDVDVKKVPS 293 (327)
T ss_dssp EEETTTEEEEEETTEEEEECCC-BCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESS---TTSSCEECGGGTTSSS
T ss_pred EEeCCceEEEecCCCCCeeEec-cCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCC---CCcccEEcCccCCCCC
Confidence 5567788887743211111111 111 11234688999998777776655 6666 33433 233333333 2345
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.+.++.|.+++ .+++++.+|.|..++-
T Consensus 294 ~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 294 NFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp CCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred CeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 67888887543 5777778898776654
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.89 E-value=0.096 Score=62.74 Aligned_cols=511 Identities=9% Similarity=0.034 Sum_probs=242.0
Q ss_pred CCceEEEEeCC--CCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 176 LTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 176 ~~~i~~~~~sp--~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
...+|++.... ....+|+.+..+.+ +|+.+............+..-...+.+-.+ .++ .++-.. ...|++.+..
T Consensus 425 v~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~~l-~~~-~ivQVt-~~~Irli~~~ 500 (1158)
T 3ei3_A 425 IKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCGNV-AHQ-QLIQIT-SASVRLVSQE 500 (1158)
T ss_dssp CCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEEEE-TTT-EEEEEE-SSCEEEEESS
T ss_pred ccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccccccCCCCcEEEEEc-CCC-eEEEEe-cCEEEEEECC
Confidence 46788887542 14567887776655 677653321111001111111111111111 111 222222 1234555543
Q ss_pred CCCCCCCCCCCceEEcCC-CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-
Q psy4510 254 RGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE- 331 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~- 331 (812)
.. ..+..+... ...|...+.+. ..++.++ .+.+.++.+..+.... ... ..-...|.|+++.|..
T Consensus 501 ~~-------~~~~~w~~p~~~~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~~--~~~-~~l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 501 PK-------ALVSEWKEPQAKNISVASCNS---SQVVVAV-GRALYYLQIHPQELRQ--ISH-TEMEHEVACLDITPLGD 566 (1158)
T ss_dssp SC-------CEEEEECCTTCCCCCEEEECS---SEEEEEE-TTEEEEEEEETTEEEE--EEE-EECSSCEEEEECCCCSS
T ss_pred CC-------eEEEEEECCCCCEEEEEEeCC---CEEEEEE-CCEEEEEEeeCCceee--ecc-cCCCCceEEEEeecCCC
Confidence 31 233334322 23465656553 3444444 5788888877543111 111 1234579999998643
Q ss_pred ----CeEEEEEEC-CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 332 ----KRVLASCSV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 332 ----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
..+++.|.. |++|+|+.+...... ....+ .......++.+.. ...+|..|-.||.+.-+.+.. .++...
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~-~~~~L--~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~-~tg~l~ 642 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELL-HKEML--GGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI-ETGLLS 642 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEE-EEEEC--CSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT-TTCCEE
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeE-EEEEC--CCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC-CCCccc
Confidence 247888886 999999999743211 11222 1122334444332 234889999999987776642 122221
Q ss_pred E---EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE-EEEcC
Q psy4510 405 A---TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE-LHWHP 480 (812)
Q Consensus 405 ~---~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p 480 (812)
. .+-+ ..++.=..+...+...+++.| ++...++--. . .+.+....-..+.. ..|+.
T Consensus 643 d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~-----------------~l~~s~l~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 643 DRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-H-----------------KLVFSNVNLKEVNYMCPLNS 702 (1158)
T ss_dssp EEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-S-----------------SEEEEEBSSSCCCEEEEECC
T ss_pred cceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-C-----------------ceEEeccChHHhceEeccCc
Confidence 1 1222 334433334333322333333 3444444322 1 22233222223322 23433
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc-Ccc-------
Q psy4510 481 Q-LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN-LTS------- 551 (812)
Q Consensus 481 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~-l~~------- 551 (812)
. .+.-++....+.+.++......... ....+-...+..++++|......+.+... ....... ...
T Consensus 703 e~~~~g~v~~~~~~LrI~~i~~~~~~~-~~~ipL~~Tprri~y~~~~~~~~v~~~~~-----~~~~~~~~~~~~~~~~~~ 776 (1158)
T 3ei3_A 703 DGYPDSLALANNSTLTIGTIDEIQKLH-IRTVPLYESPRKICYQEVSQCFGVLSSRI-----EVQDTSGGTTALRPSAST 776 (1158)
T ss_dssp SSSTTEEEEECSSCEEEEEECCSSSEE-EEEEECSSEEEEEEEEGGGTEEEEEEEEE-----EEECSSSSEEESSCCHHH
T ss_pred ccCCCcEEEEcCCceEEEEecccCCee-EEEEeCCCCceEEEEcCCCCEEEEEEEec-----cccccccccchhhhhhhh
Confidence 2 3455666667778887754332211 12222335788899999855444444321 0000000 000
Q ss_pred -----cccccc--cccccccCC--CC---CCccccCCCccceEE----ecccceEEEEEEe---cc-CCeEEEEeec---
Q psy4510 552 -----TEEDNE--RELEDDESE--GS---GDEDRRKDPVMNSYF----IRHRGCINRVRTC---QY-GSTTLAGVWG--- 608 (812)
Q Consensus 552 -----~~~~~~--~~~~~~~~~--~~---~~~~~~~~~~~~~~~----~~h~~~v~~l~~s---~~-g~~l~~~~~~--- 608 (812)
...... ...+..... +. ....+.-++...... ......+.+++.. .+ ..++++|++-
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~ 856 (1158)
T 3ei3_A 777 QALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 856 (1158)
T ss_dssp HCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCT
T ss_pred hhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCC
Confidence 000000 000000000 00 000000011111111 1122344454432 22 3578888641
Q ss_pred -----CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEE
Q psy4510 609 -----EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 683 (812)
Q Consensus 609 -----~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~i 683 (812)
..|+|++|++...+.. .+.. ....+.|++++-- .|++||+.+ ++|++
T Consensus 857 ~e~~~~~Gri~vf~v~~~kL~-----------------------lv~~-~~v~g~v~al~~~--~g~Lla~ig--~~l~v 908 (1158)
T 3ei3_A 857 EEAEPKQGRIVVFQYSDGKLQ-----------------------TVAE-KEVKGAVYSMVEF--NGKLLASIN--STVRL 908 (1158)
T ss_dssp TCSSCCCEEEEEEEEETTEEE-----------------------EEEE-EEESSCEEEEEEE--TTEEEEEET--TEEEE
T ss_pred CCCCCCceEEEEEEEECCEEE-----------------------EEEE-EEcCCcCEEEeee--CCEEEEEcC--CEEEE
Confidence 4588999999743210 1221 1235678888754 345555544 68999
Q ss_pred EecCCCceeEE--E--------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccc--cCCCcceeEeEEecCCceeE
Q psy4510 684 WTPREAGAWSV--Y--------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVL 751 (812)
Q Consensus 684 Wd~~~~~~~~~--~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~--~gH~~~V~~l~fs~dg~~~L 751 (812)
|++...+.... . .....+.++++|+.-..|.+...+.... .+..+ .-+...++++.|-.++. +
T Consensus 909 y~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~---~L~~~a~D~~~~~vta~~~ld~~t--~ 983 (1158)
T 3ei3_A 909 YEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG---NFEEIARDFNPNWMSAVEILDDDN--F 983 (1158)
T ss_dssp EEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTT---EEEEEEECCSCBCEEEEEEEETTE--E
T ss_pred EECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC---eEEEEEeecccccEEEEEEEccCc--E
Confidence 99986543221 1 1224578899998888787766543221 12222 22345789999987764 6
Q ss_pred EeeccCCceEEeeecC
Q psy4510 752 ASCSVDRSNRIGARRD 767 (812)
Q Consensus 752 ~s~s~Dg~i~iWd~~~ 767 (812)
+.+..+|.|.+.....
T Consensus 984 l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 984 LGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEETTSEEEEEEECT
T ss_pred EEEcCCCcEEEEecCC
Confidence 7799999999987654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0087 Score=63.00 Aligned_cols=224 Identities=11% Similarity=-0.034 Sum_probs=132.2
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~ 254 (812)
...+..++|++.++.+..+-...+.|+.+++............+.........|++.+.+..|..+ ...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 356889999984555666666778899998875321101122223344567789998866656554 4577888888875
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. .....+........+|++.|.+ +.|+.... .+.|...++..... .......-...+.|++++.+.
T Consensus 191 ~-------~~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~dG~~~----~~~~~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 191 V-------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSG 258 (400)
T ss_dssp C-------SEEEEEECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETTSCSC----EEEECSSCSCEEEEEEETTTT
T ss_pred C-------ceEEEEeCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCCCCcc----EEEEECCCCceEEEEEEeCCC
Confidence 3 2222233334567899999977 55554442 36788888875432 111122335678999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
.++++-+..+.|..+|+..... ..+... ...-.....++.. .+.++++-...+.|..+|.. .+..+..+.....
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~~-~~~~~~-~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~---~G~~~~~i~~~~~ 332 (400)
T 3p5b_L 259 RLYWVDSKLHSISSIDVNGGNR-KTILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL---TGSDVNLLAENLL 332 (400)
T ss_dssp EEEEEETTTTEEEEEETTSCCC-EEEEEC-SSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS---SCCCCEEEECSCS
T ss_pred EEEEEECCCCEEEEEeCCCCcc-EEEEeC-CCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC---CCCceEEEecCCC
Confidence 7777767778999999864221 112211 1222345566663 33466666677888888865 3444444433333
Q ss_pred CEEEE
Q psy4510 413 PVTTV 417 (812)
Q Consensus 413 ~v~~v 417 (812)
....|
T Consensus 333 ~p~~i 337 (400)
T 3p5b_L 333 SPEDM 337 (400)
T ss_dssp CEEEE
T ss_pred CCceE
Confidence 33444
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00046 Score=79.68 Aligned_cols=205 Identities=7% Similarity=-0.025 Sum_probs=113.6
Q ss_pred CCCCC-CeeeeeEc-CCCCcEEEeeC-CC----ceEEeeCCCC-CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE
Q psy4510 220 GGHTN-SAEDLQWS-DLKTALQTVDD-PF----QLAEHNKKRG-KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 220 ~~h~~-~V~~l~~s-~~~~~l~s~~~-d~----~i~vwd~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
.+|.. .+...+|| |||++||-+.. +| .|+++|+.++ .. ....+.. ....++|+|+++ .|+..
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~------l~~~~~~---~~~~~~WspDg~-~l~y~ 238 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT------IADKVSG---TNGEIVWGPDHT-SLFYV 238 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC------CCCCEEE---ECSCCEECSSTT-EEEEE
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe------CCccccC---ceeeEEEecCCC-EEEEE
Confidence 34554 78899999 99998885543 22 4999999875 31 0011111 124689999994 44444
Q ss_pred eCC-----CcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEEC--CCeEEEEECCCCCcccceeecCC
Q psy4510 292 DCK-----RNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSV--DLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 292 ~~d-----g~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
..+ ..|+++++.++..... ..+. ........+.|+|+++.++++... ...|.++|+..+.....+..+..
T Consensus 239 ~~d~~~~~~~v~~~~lgt~~~~~~--lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 239 TKDETLRENKVWRHVMGKLQSEDV--CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EECTTCCEEEEEEEETTSCGGGCE--EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EECCCCCCCEEEEEECCCCchhcE--EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 443 2578888876542111 1111 223456788999999976665543 34677888875321110123323
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCC--C--cEEEEecCCCCCCCceEE-cccCCC--CEEEEEEccCCCcEEEEEECCCCE
Q psy4510 364 AHTSDVNVISWNRTEPLIVSGGDD--G--CIHVWDLRRFKKGSSVAT-FKHHTA--PVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 364 ~~~~~v~~l~~~~~~~~l~sg~~d--g--~i~iwd~~~~~~~~~~~~-~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
.......++.|+..+.+++....+ + .|..+|+... ..... +..+.. .+..+.+. +..++++...++..
T Consensus 317 ~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~---~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~ 391 (751)
T 2xe4_A 317 REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP---SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLT 391 (751)
T ss_dssp CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST---TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEE
T ss_pred CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc---ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEE
Confidence 344556667665544455554443 3 5666666421 11112 222333 34455554 45677777778754
Q ss_pred E--EEEc
Q psy4510 437 A--LWDL 441 (812)
Q Consensus 437 ~--iwd~ 441 (812)
+ ++++
T Consensus 392 ~l~~~dl 398 (751)
T 2xe4_A 392 RIWTMMA 398 (751)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 4 4554
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.87 E-value=0.038 Score=58.08 Aligned_cols=186 Identities=12% Similarity=0.026 Sum_probs=115.7
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+......+.+|+|.+.+..++.+-...+.|+.+++....................
T Consensus 90 ~~~~I~~i~l~~~--------~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 90 NRHEVRKMTLDRS--------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp ETTEEEEECTTSC--------SCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ccceeEEEccCCc--------ceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 4467888887763 22333344567899999997734555555678899999875321000112222234567
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~ 400 (812)
..+++.+.+.+++++-...+.|.+.++.... ...+..........|++.|.+..|+... ..+.|...++.
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~----~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d---- 233 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN---- 233 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCS----EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT----
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCc----eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC----
Confidence 8999998766677777778899999987322 1222122344578999999766554443 24788888885
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|+++|.+.++.++-...+.|..+|+...
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 3233322 2233567899999887655555555678999998754
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0073 Score=61.06 Aligned_cols=231 Identities=9% Similarity=0.011 Sum_probs=129.5
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-C-cEEEEeC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-R-NIHIWTP 302 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-g-~i~vwd~ 302 (812)
....++|+++++.+++-...+.|..++.... ....+ .-.....++++.+++ .++++.... + .|..++.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~--------~~~~~-~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--------QQIHA-TVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC--------EEEEE-ECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc--------eEEEE-eCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcC
Confidence 4567888888886666557888888887642 22222 223568899999998 555554332 2 4666776
Q ss_pred CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--------cCCcCCCCeEEEEE
Q psy4510 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--------LPNAHTSDVNVISW 374 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~v~~l~~ 374 (812)
.++.... .... ........++..+.+. ++++...++.|.++|...... .+.. .....-...+.|
T Consensus 103 ~~g~~~~--~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~--~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 103 SDGTVET--LLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSG--SIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp TTSCEEE--EEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEE--EEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred CCCeEEE--EEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcE--eEEEECCccccccccCCCCcCCCc--
Confidence 6654211 1111 1122345555555443 555555688999999763210 0100 001112245566
Q ss_pred cCCCCE-EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhh
Q psy4510 375 NRTEPL-IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 375 ~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
++++.. +++-...+.|.++++...........+.. ......+++.++| +++++....+.|.++|.... .
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~-~------- 244 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRS-T------- 244 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCC-E-------
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCC-E-------
Confidence 777774 45555678999999863101011111111 1234668899987 56666666788999986522 1
Q ss_pred hhhccCCCceE-EeecCCCceeEEEEc---CCCCCEEEEEeC
Q psy4510 454 AELKDLPSQLL-FIHLGQKEIKELHWH---PQLPGTIISTAN 491 (812)
Q Consensus 454 ~~~~~~~~~~~-~~~~~~~~v~~~~~~---p~~~~~~~~~~~ 491 (812)
..+ .....-....+++|. |++..++++...
T Consensus 245 --------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 245 --------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --------EEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 001 111222457889998 776667766654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0059 Score=62.06 Aligned_cols=205 Identities=10% Similarity=-0.057 Sum_probs=123.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+..++|++.++.+.++-...+.|..+++.+..........+...-.....+++.+.+..|..+ ...+.|.+.+....
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45788999984455666767778999999876210000111122223456789998766655544 56788999987652
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-C-CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-K-RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-d-g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.....+.........+++.|.+ +.|..++. . +.|...++..... .......-...+.|+++|++..
T Consensus 110 -------~~~~~~~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~~~~dG~~~----~~~~~~~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 110 -------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSGR 177 (316)
T ss_dssp -------SEEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCCE----EEEECSSCSCEEEEEEETTTTE
T ss_pred -------ceEEEEECCCCCcceEEeCCCC-CEEEEEccCCCCeEEEEcCCCCCe----EEEEECCCCCceEEEEeccCCE
Confidence 1112222334567899999977 45444443 3 6788888764431 1111122346789999998887
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+|+.... ...+... .........+++. .+.++++-...+.|..++..
T Consensus 178 lY~~D~~~~~I~~~d~dg~~-~~~~~~~-~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 178 LYWVDSKLHSISSIDVNGGN-RKTILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEEEC-TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCeEEEEecCCCc-eEEEeec-CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 77777778899999987422 2222221 1122345677775 35566666667888888875
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.033 Score=56.40 Aligned_cols=181 Identities=12% Similarity=0.021 Sum_probs=112.6
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC---CcceeccccccCCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA---GAWQVDQKPLVGHTNS 321 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~~~~~h~~~ 321 (812)
..|+..++... .....+ .......+++|.+.+..++.+-...+.|..+++... .. ....+......
T Consensus 10 ~~I~~i~~~~~-------~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~---~~~~~~~~~~~ 78 (316)
T 1ijq_A 10 HEVRKMTLDRS-------EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQA 78 (316)
T ss_dssp SSEEEEETTSC-------CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSC
T ss_pred CeEEEEECCCc-------ceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc---cEEEEeCCCCC
Confidence 55778887763 222223 334567899999876345555556789999998762 11 11112222245
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CC-CcEEEEecCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DD-GCIHVWDLRRFK 399 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~d-g~i~iwd~~~~~ 399 (812)
...+++.+.+.+++++-...+.|.+.++.... ...+..........+++.|.+..|+... .. +.|...++.
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--- 151 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--- 151 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSS----EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCc----eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC---
Confidence 68899988777677777778999999986321 1122122334678999998666444443 33 688888885
Q ss_pred CCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 KGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|+++|++..+.++-+..+.|..+|+...
T Consensus 152 -G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 152 -GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp -SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred -CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 3333333 2233467899999987656666666778999998754
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0018 Score=69.11 Aligned_cols=245 Identities=7% Similarity=0.024 Sum_probs=137.7
Q ss_pred CceEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CC----ceEEe
Q psy4510 177 TEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PF----QLAEH 250 (812)
Q Consensus 177 ~~i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~----~i~vw 250 (812)
.....++++|. ++.+.++-.. +.|+.+|+.+.. +..+.........|+|++++++|..+.. .+ .+.+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~-----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEY-----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTE-----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCE-----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 45577899982 4555554443 789999887653 1222234456889999999996666654 22 23333
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
+.... ......+.. ......++++|++..++++-...+.|..++....... ..... +.......|+|+|+
T Consensus 211 ~~~g~------~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~-~~~~~P~gia~~pd 280 (430)
T 3tc9_A 211 TRESG------FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTI-QDSGWEFHIQFHPS 280 (430)
T ss_dssp EGGGT------SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEEC-SSSSCCEEEEECTT
T ss_pred eCCCc------eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEc-CCCCcceeEEEcCC
Confidence 33221 121122221 2345678899944256666666788999998765310 01111 12245679999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCc-ccceeecCC--------------cCCCCeE-EEEEc--------CCCCEEEEEeC
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINT-KSCMLTLPN--------------AHTSDVN-VISWN--------RTEPLIVSGGD 386 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~--------------~~~~~v~-~l~~~--------~~~~~l~sg~~ 386 (812)
++.++++-...+.|..++...... ...+..+.. +.-..-. .++.. +++.++++=..
T Consensus 281 G~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 281 GNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred CCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 997677777788999988652100 000011100 0011122 45543 33555565556
Q ss_pred CCcEEEEecCCCCCCCceEEcccC------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHH------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.+.|+.++.. +. +.++.+. -.....|++.|++..++++-...++|+.+++.
T Consensus 361 n~~I~~i~~~----G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 361 NHCIRILTPQ----GR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GTEEEEECTT----SE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEECCC----Cc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 6788888742 32 2222211 11468899998544566665566788887753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00081 Score=64.07 Aligned_cols=200 Identities=12% Similarity=0.039 Sum_probs=116.9
Q ss_pred CCCCCCccCcCCCC--CceEEEEeCCCCCCeEEEecCC--CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE
Q psy4510 163 GIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGDCK--RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238 (812)
Q Consensus 163 ~~~~~~i~~~~gh~--~~i~~~~~sp~~~~~lat~~~d--g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l 238 (812)
....+.+..+ .|. .-...+.|++ +.+..+.+.+ ..|+.+|+.+++.... ..+..+ .........++.|
T Consensus 6 ~~~~~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~--~~l~~~---~fgeGi~~~~~~l 77 (243)
T 3mbr_X 6 TQGYRVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQR--AEVPPP---YFGAGIVAWRDRL 77 (243)
T ss_dssp BCCEEEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEE--EECCTT---CCEEEEEEETTEE
T ss_pred ccceEEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEE--EeCCCC---cceeEEEEeCCEE
Confidence 3333444444 454 3356888876 4566666654 4899999999874221 122222 2222222334555
Q ss_pred EEe-eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 239 QTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 239 ~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
... -.++.+.++|..+. +.+.++.. ....++|+ +++ ..|+.+..++.|.++|..+.+..... ....
T Consensus 78 y~ltw~~~~v~v~D~~tl-------~~~~ti~~-~~~Gwglt--~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I--~V~~ 144 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATL-------TPRARFRY-PGEGWALT--SDD-SHLYMSDGTAVIRKLDPDTLQQVGSI--KVTA 144 (243)
T ss_dssp EEEESSSSEEEEEETTTT-------EEEEEEEC-SSCCCEEE--ECS-SCEEEECSSSEEEEECTTTCCEEEEE--ECEE
T ss_pred EEEEeeCCEEEEEECCcC-------cEEEEEeC-CCCceEEe--eCC-CEEEEECCCCeEEEEeCCCCeEEEEE--EEcc
Confidence 444 47899999999884 66777664 33455665 455 45555566889999999887631111 1111
Q ss_pred CC---CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--cC-------CcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 318 HT---NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--LP-------NAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 318 h~---~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~-------~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
+. ..++.+.|. +|. +++..-.+..|.+.|.+++.-...+.. +. .....-.+.|+++|+++.|+..+
T Consensus 145 ~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 145 GGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 11 345677776 454 676666788999999986543221110 10 01224579999999887555444
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=97.81 E-value=0.12 Score=61.78 Aligned_cols=114 Identities=8% Similarity=0.014 Sum_probs=67.6
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC------CCEEEEEeC-CCcEEE
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT------EPLIVSGGD-DGCIHV 392 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~sg~~-dg~i~i 392 (812)
..|...+.+. .. ++.++ .+.+.++.+..++ ....... .-...|.|+++.|. +++++.|.. |++|+|
T Consensus 514 ~~I~~As~n~--~~-vvva~-g~~l~~fel~~~~-L~~~~~~--~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I 586 (1158)
T 3ei3_A 514 KNISVASCNS--SQ-VVVAV-GRALYYLQIHPQE-LRQISHT--EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 586 (1158)
T ss_dssp CCCCEEEECS--SE-EEEEE-TTEEEEEEEETTE-EEEEEEE--ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEE
T ss_pred CEEEEEEeCC--CE-EEEEE-CCEEEEEEeeCCc-eeeeccc--CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEE
Confidence 3566666543 33 44444 5788888776421 1112221 23567999999863 358999996 999999
Q ss_pred EecCCCCCCCceEEccc-CCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCC
Q psy4510 393 WDLRRFKKGSSVATFKH-HTAPVTTVEWHP-TESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~-h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+++.. ...+....- -.....++.+.. .+..+|..|-.||.+..+.+..
T Consensus 587 ~sL~~---l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 587 LKLPS---FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp EETTT---CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred EECCC---CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 99974 333332211 122444554432 1335788898999887776653
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.77 E-value=0.036 Score=56.12 Aligned_cols=184 Identities=12% Similarity=-0.019 Sum_probs=115.4
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
...|+..++... .............+.+++|.+.+..++.+-...+.|+.+++...... ...+........
T Consensus 12 ~~~I~~i~l~~~------~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~~~l~~p~ 82 (318)
T 3sov_A 12 RRDLRLVDATNG------KENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEEEETTCT------TSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC---CEEEEECCSCCC
T ss_pred cCeEEEEECCCC------ceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce---EEEEcCCCCCcc
Confidence 467888888763 11122222223457799999976355556566788999998765311 111122224567
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKKG 401 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~ 401 (812)
.+++.+.+..++++-...+.|.++++.... ...+........+.+++.|.+..|+... ..+.|...++. +
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~----~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d----G 154 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSL----RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD----G 154 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT----S
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCc----EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC----C
Confidence 899998777677777778899999987422 1112123345678999998766555444 35788888885 2
Q ss_pred CceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+ ...-..-..|+++|++..+.++-+..+.|..+|+...
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 222222 2223456899999977656666566788999998754
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0025 Score=72.26 Aligned_cols=200 Identities=11% Similarity=0.132 Sum_probs=106.7
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccC-----CCC-CCe-eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-----GHT-NSA-EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-----~h~-~~V-~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+..|++++.++.|.-+|..+++..-....... ... ..+ ..+++ .+..++.++.++.|..+|..++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG------ 137 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTG------ 137 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTC------
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCC------
Confidence 34455555567777777776653210000000 000 011 12233 3456788888999999999987
Q ss_pred CCCceEEcCCC-CcEEEEEecC--CCCCEEEEEeC------CCcEEEEeCCCCCc-ceecccc---cc------------
Q psy4510 262 TPPLFSFSGHL-TEGFAMDWSS--TEPGVLATGDC------KRNIHIWTPREAGA-WQVDQKP---LV------------ 316 (812)
Q Consensus 262 ~~~~~~~~~h~-~~v~~l~~sp--~~~~~l~sg~~------dg~i~vwd~~~~~~-~~~~~~~---~~------------ 316 (812)
+.+..+.... .....+.-+| .+ +.++.+.. +|.|..+|..+++. |...... ..
T Consensus 138 -~~~W~~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 215 (668)
T 1kv9_A 138 -KAIWSQQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAK 215 (668)
T ss_dssp -CEEEEEECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred -CEeeeeccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccc
Confidence 4444443311 0001111111 12 45555543 58899999998874 2221100 00
Q ss_pred -----------CCCCCEEEEEEcCCCCeEEEEEECCC-------------------eEEEEECCCCCcccceeecCCc-C
Q psy4510 317 -----------GHTNSVEDLQWSPGEKRVLASCSVDL-------------------SIRIWDTRVINTKSCMLTLPNA-H 365 (812)
Q Consensus 317 -----------~h~~~v~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~-~ 365 (812)
++......+++.|... +++.++.++ .|..+|.++++. +..+... |
T Consensus 216 ~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~---~W~~~~~~~ 291 (668)
T 1kv9_A 216 TWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL---AWHYQVTPG 291 (668)
T ss_dssp TCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE---EEEEESSTT
T ss_pred cCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce---eeEeecCCC
Confidence 1111223468888777 577776665 499999986543 3333111 2
Q ss_pred C-------CCeEEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 366 T-------SDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 366 ~-------~~v~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
. .+.....+..+|+ .++.++.+|.++++|.+ +++.+.
T Consensus 292 ~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~ 338 (668)
T 1kv9_A 292 DSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT---NGKLIS 338 (668)
T ss_dssp CCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEE
T ss_pred ccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC---CCCEec
Confidence 2 2333333333564 68899999999999987 455553
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0011 Score=75.45 Aligned_cols=115 Identities=12% Similarity=0.052 Sum_probs=70.9
Q ss_pred EEeCCCCCCeEEEecCCC-----------cEEEEccCCCCccccccccc-CCCCCCeeeeeEcCCCCcEEEee-CCCceE
Q psy4510 182 MDWSSTEPGVLATGDCKR-----------NIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTALQTVD-DPFQLA 248 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg-----------~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~ 248 (812)
+++.|.++++++.||.++ .+.+||+.+.+-.. ...+ ..+.....++++..+++.++.|+ .+..+.
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~--~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD--RTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC--CEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe--CcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 455554778888887543 58899998765321 1112 22334455678889999999998 456799
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-CC-----CcEEEEeCCCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD-CK-----RNIHIWTPREA 305 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~-~d-----g~i~vwd~~~~ 305 (812)
+||..+.. ...+..+.. ...-.+++..+++ .+++.|+ .+ ..+.+||+.+.
T Consensus 269 ~yd~~t~~-----W~~~~~~~~-~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 269 LYDSSSDS-----WIPGPDMQV-ARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEGGGTE-----EEECCCCSS-CCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EecCcCCc-----eeECCCCCc-cccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 99987641 111111111 1112345566777 6888887 34 56899998765
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.043 Score=62.78 Aligned_cols=186 Identities=12% Similarity=0.026 Sum_probs=115.7
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+......+.+|+|.+....++++-...+.|+.+++............+.......
T Consensus 402 n~~~Ir~i~l~~~--------~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 402 NRHEVRKMTLDRS--------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp CBSSEEEECTTSC--------CCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccceeEeeccCC--------cceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 4456777776652 23334444567889999997635555656678899999875321000112222234567
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-C-CCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-D-DGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~-dg~i~iwd~~~~~~ 400 (812)
..|++.+.+++|+++-...+.|.+.++.... ...+..........|++.|.+..|+... . .+.|.+.++.
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~----~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d---- 545 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN---- 545 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSS----EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT----
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCe----EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC----
Confidence 7899998888788888888999999987322 2222123344578999999765554443 2 3678888885
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|++.+.+.+++++-...+.|...++...
T Consensus 546 G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 3333333 2233567899999876555555455678888988655
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0018 Score=73.50 Aligned_cols=237 Identities=12% Similarity=0.053 Sum_probs=132.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCC--CCCeee-eeEcCCCCcEEEeeC------CCceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH--TNSAED-LQWSDLKTALQTVDD------PFQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h--~~~V~~-l~~s~~~~~l~s~~~------d~~i~vwd~~~~~~~~ 259 (812)
+..|++++.|+.|..+|..+++..-.. .+... ...+.+ ..+ .++ .++.+.. ++.|..+|..++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~--~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG---- 188 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQ--QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTG---- 188 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEE--ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTC----
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeee--ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCC----
Confidence 456777778899999999888742111 11100 111111 111 133 4444432 588999999887
Q ss_pred CCCCCceEEcC-------------------------------CCCcEEEEEecCCCCCEEEEEeCCC-------------
Q psy4510 260 IPTPPLFSFSG-------------------------------HLTEGFAMDWSSTEPGVLATGDCKR------------- 295 (812)
Q Consensus 260 ~~~~~~~~~~~-------------------------------h~~~v~~l~~sp~~~~~l~sg~~dg------------- 295 (812)
+.+.++.. +......+++.|.. ++++.+..++
T Consensus 189 ---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~g 264 (668)
T 1kv9_A 189 ---KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGG 264 (668)
T ss_dssp ---CEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCC
T ss_pred ---cEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCC
Confidence 33333321 01111246788876 6888887665
Q ss_pred ------cEEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCccccee
Q psy4510 296 ------NIHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 296 ------~i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~ 359 (812)
.|..+|+.+++. |... ...|. .+.....+..+++ .+++.++.+|.+.++|.++++......
T Consensus 265 d~l~~~~v~AlD~~tG~~~W~~~---~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 265 DNLYLSSILAIRPDTGKLAWHYQ---VTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEE---SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CceeeeeEEEEcCCCCceeeEee---cCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 399999998874 2211 11121 2222222223443 358889999999999998654321100
Q ss_pred --------ecCCcCCC------------------------CeEEEEEcCCCCEEEEEe----------------------
Q psy4510 360 --------TLPNAHTS------------------------DVNVISWNRTEPLIVSGG---------------------- 385 (812)
Q Consensus 360 --------~~~~~~~~------------------------~v~~l~~~~~~~~l~sg~---------------------- 385 (812)
.+...... .-..++++|+..+++...
T Consensus 342 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~ 421 (668)
T 1kv9_A 342 FGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNT 421 (668)
T ss_dssp SSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCC
T ss_pred ccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccccccccc
Confidence 00000000 011267777766555421
Q ss_pred --------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 386 --------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 386 --------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+|.|..||+. +++.+.....+. ++....+...+ .+++.++.|+.|+.||..+++
T Consensus 422 g~~~~~~~~~p~~~~~g~l~A~D~~---tG~~~W~~~~~~-~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 422 AAGFADATDVPAAVVSGALLAWDPV---KQKAAWKVPYPT-HWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp SSCGGGCCCCCGGGCEEEEEEEETT---TTEEEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred CccccccCCCCCCCccceEEEEeCC---CCcEEEEccCCC-CCcCceeEeCC-CEEEEECCcccchhhhhhcCh
Confidence 23789999997 466666655432 22223333444 478888999999999999884
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.016 Score=64.18 Aligned_cols=76 Identities=5% Similarity=-0.031 Sum_probs=50.3
Q ss_pred CCceEEEEecCCCce-eEEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCC-cceeEeEEecC
Q psy4510 677 CKRNIHIWTPREAGA-WSVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~-~~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~-~~V~~l~fs~d 746 (812)
.+|.|..||+.+|++ ++... ....+.+|..|+.|+.++.||.++++. +-.+.-.. ....-+.|..+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~----lW~~~l~~g~~~~P~~y~~~ 526 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL----LWKFKIPSGAIGYPMTYTHK 526 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE----EEEeeCCCCcEeccEEEEeC
Confidence 458999999999876 33321 223567888899999999999999985 22222111 11233667789
Q ss_pred CceeEEeecc
Q psy4510 747 EKRVLASCSV 756 (812)
Q Consensus 747 g~~~L~s~s~ 756 (812)
|++|+++.+-
T Consensus 527 G~qyv~~~~G 536 (599)
T 1w6s_A 527 GTQYVAIYYG 536 (599)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9877765443
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.68 E-value=0.011 Score=59.86 Aligned_cols=200 Identities=11% Similarity=-0.022 Sum_probs=125.3
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+.+++|.+.++.+..+-...+.|+.+++.+.... ...+...-.....+++.+.+..|..+ ...+.|.+.++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC---CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce---EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 456789999855666677777889999988765321 11122222456788998766555444 46678999988752
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.....+.........+++.|.+ +.|.... ..+.|...++..... .......-...+.|+++|++..
T Consensus 112 -------~~~~l~~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~~~dG~~~----~~~~~~~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 112 -------LRKVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSR----FIIINSEIYWPNGLTLDYEEQK 179 (318)
T ss_dssp -------SCEEEECSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEEETTSCSC----EEEECSSCSCEEEEEEETTTTE
T ss_pred -------cEEEEEeCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEEEcCCCCe----EEEEECCCCCccEEEEeccCCE
Confidence 2222223444567899999976 5555554 257788888764431 1111122345789999998887
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+|+.... ...+. .........+++.. +.++.+-...+.|..++..
T Consensus 180 lY~aD~~~~~I~~~d~dG~~-~~~~~---~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLDGTN-RQAVV---KGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEE---CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEcCCCCc-eEEEe---cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 77777778899999987322 11111 22334456677653 3466666667888888875
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.079 Score=58.62 Aligned_cols=83 Identities=7% Similarity=0.046 Sum_probs=50.3
Q ss_pred CCceEEEEecCCCcee-EEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcce-eEeEEecC
Q psy4510 677 CKRNIHIWTPREAGAW-SVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV-EDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~-~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V-~~l~fs~d 746 (812)
.+|.|..||+.+|++. +... ....+.+|++|+.|+.++.||.++++. +-.+....+.+ .-+.|..+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~----lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE----LWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE----EEEecCCCCcccCceEEEEC
Confidence 4677777777776543 3221 122456788899999999999999984 22332222211 23677889
Q ss_pred CceeEEeecc-CCceEEe
Q psy4510 747 EKRVLASCSV-DRSNRIG 763 (812)
Q Consensus 747 g~~~L~s~s~-Dg~i~iW 763 (812)
|++|+++.+- -|.+-+|
T Consensus 540 G~qYv~~~~G~gg~~~~~ 557 (582)
T 1flg_A 540 GEQYLGVTVGYGGAVPLW 557 (582)
T ss_dssp TEEEEEEEECCCSHHHHH
T ss_pred CEEEEEEEccCCCccccc
Confidence 9877765543 3434344
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.018 Score=63.77 Aligned_cols=77 Identities=8% Similarity=-0.028 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCcee-EEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCccccccccc-CCCcceeEeEEecC
Q psy4510 677 CKRNIHIWTPREAGAW-SVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~-~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~-gH~~~V~~l~fs~d 746 (812)
.+|.|..||+.+|++. +... +...+..|.+++.||.|+.+|.++++. +-.+. ++...-.-+.+..+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~----lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE----LWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE----EEEEeCCCCcEeeeEEEEEC
Confidence 4689999999998753 3221 223466788899999999999999984 22222 21111122446789
Q ss_pred CceeEEeeccC
Q psy4510 747 EKRVLASCSVD 757 (812)
Q Consensus 747 g~~~L~s~s~D 757 (812)
|+.|+++.+..
T Consensus 518 G~~yv~~~~G~ 528 (571)
T 2ad6_A 518 GKQYIGSMYGV 528 (571)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEECCC
Confidence 98555555444
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0051 Score=68.12 Aligned_cols=236 Identities=11% Similarity=0.013 Sum_probs=128.4
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCC--CCeee-eeEcCCCCcEEEeeC------CCceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT--NSAED-LQWSDLKTALQTVDD------PFQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~--~~V~~-l~~s~~~~~l~s~~~------d~~i~vwd~~~~~~~~ 259 (812)
+..|+.++.|+.|..+|..+++..-. ..+..+. ..+.+ ... .++ .++.++. ++.|..+|..++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~--~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG---- 186 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWE--VEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTG---- 186 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEE--EECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTC----
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEE--ecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCC----
Confidence 45677777789999999888764211 1111111 12221 111 134 4555543 789999999887
Q ss_pred CCCCCceEEcCCCC-------------------------------------cE-EEEEecCCCCCEEEEEeCC-------
Q psy4510 260 IPTPPLFSFSGHLT-------------------------------------EG-FAMDWSSTEPGVLATGDCK------- 294 (812)
Q Consensus 260 ~~~~~~~~~~~h~~-------------------------------------~v-~~l~~sp~~~~~l~sg~~d------- 294 (812)
+.+.++..... .+ ..+++.+.. +++..+..+
T Consensus 187 ---~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~g~~~~~~~~ 262 (571)
T 2ad6_A 187 ---ELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGSGNPAPWNET 262 (571)
T ss_dssp ---CEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGG
T ss_pred ---cEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-CeEEEECCCCccccCC
Confidence 33333321110 00 134555655 566555432
Q ss_pred ---------CcEEEEeCCCCCc-ceecccc-----ccCCCCCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcccc
Q psy4510 295 ---------RNIHIWTPREAGA-WQVDQKP-----LVGHTNSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSC 357 (812)
Q Consensus 295 ---------g~i~vwd~~~~~~-~~~~~~~-----~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~ 357 (812)
+.|..+|..+++. |...... +.....++. +...++|+ .+++.++.+|.+.++|.++++..
T Consensus 263 ~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~-- 339 (571)
T 2ad6_A 263 MRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI-- 339 (571)
T ss_dssp GSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE--
T ss_pred ccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE--
Confidence 3589999988874 2211110 001122222 22224564 36778889999999998865432
Q ss_pred eeecCCcC------------CCCe--------------------------EEEEEcCCCCEEEEEe--------------
Q psy4510 358 MLTLPNAH------------TSDV--------------------------NVISWNRTEPLIVSGG-------------- 385 (812)
Q Consensus 358 ~~~~~~~~------------~~~v--------------------------~~l~~~~~~~~l~sg~-------------- 385 (812)
....... ..++ ..++++|+..++++..
T Consensus 340 -w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 418 (571)
T 2ad6_A 340 -VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPY 418 (571)
T ss_dssp -EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred -eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhcccccccccccc
Confidence 2111110 0011 2457788777666553
Q ss_pred -----------------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 386 -----------------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 386 -----------------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.+|.|..||+. +++.+.++... .++.+..+...+ .+++.++.|+.|+.+|..
T Consensus 419 ~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~---tG~~~W~~~~~-~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 419 RAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT---TGKAKWTKWEK-FAAWGGTLYTKG-GLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT---TCCEEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETT
T ss_pred ccCCccccccceeccCccccCCCCCCeEEEEECC---CCCEEEEecCC-CCccceeEEECC-CEEEEEcCCCeEEEEECC
Confidence 34789999987 46666665432 222222222233 367778999999999999
Q ss_pred CCC
Q psy4510 443 VER 445 (812)
Q Consensus 443 ~~~ 445 (812)
+++
T Consensus 494 tG~ 496 (571)
T 2ad6_A 494 DGK 496 (571)
T ss_dssp TCC
T ss_pred CCC
Confidence 884
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.029 Score=62.15 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=35.1
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+|.|..||+. +++.+.+..... ++..-.....+ .+++.++.|+.++.||.++++
T Consensus 465 ~G~l~A~D~~---tG~~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPV---SGKVVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTT---TCCEEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECC---CCCEEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCCC
Confidence 5789999997 466665554332 22111111223 477779999999999999884
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.03 Score=64.01 Aligned_cols=204 Identities=10% Similarity=-0.054 Sum_probs=122.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
..+.+++|.+..+.++++-...+.|+.+++............+.........|++.+.+..|..+. ..+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 567889999855566667677788988888753211012222333445677899998887666554 5778999988752
Q ss_pred CCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
...++ ........+|++.|.+ +.|+.... .+.|.+.++..... ...+...-...+.|++.+.+.
T Consensus 504 --------~~~~l~~~~l~~P~gIaVDp~~-g~LYwtD~g~~~~I~~~~~dG~~~----~~lv~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 504 --------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSG 570 (791)
T ss_dssp --------SEEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCCE----EEEECSSCSCEEEEEEETTTT
T ss_pred --------eEEEEEeCCCCCcceEEEecCC-CCEEEecCCCCCeEEEEecCCCce----EEEEeCCCCCceEEEEecCCC
Confidence 22333 2334568899999986 45555443 26788888875442 111222335788999998888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
.|+++-...+.|...++...... .+... ...-.....|++.. +.++++-...+.|...|..
T Consensus 571 ~LYwaD~~~~~I~~~d~dG~~~~-~v~~~-~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 571 RLYWVDSKLHSISSIDVNGGNRK-TILED-EKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEEEETTTTEEEEEETTSCSCE-EEEEC-TTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCCCcEEEEecCCCceE-EEecC-CCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 76666666788999998643221 12111 11222345666532 2345555556777777755
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.022 Score=60.56 Aligned_cols=156 Identities=12% Similarity=0.050 Sum_probs=96.5
Q ss_pred CeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-CC----cEE
Q psy4510 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KR----NIH 298 (812)
Q Consensus 225 ~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-dg----~i~ 298 (812)
....|+++| ++..|..+...+.|+.+++..+ .+..+.........|+|++++ +.|+.+.. .+ .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--------~v~~~~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--------YVSTVYSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT--------EEEEEECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC--------EEEEEecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEE
Confidence 457889998 4666766665588888988763 344444455668899999998 54444443 22 233
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+.+.. +.. . ....+. .......++++|++..++++-..++.|..++...... ..+... ......+.|+|+|++
T Consensus 209 ~~~~~-g~~-~-~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~--~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 209 ILTRE-SGF-K-VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTI--QDSGWEFHIQFHPSG 281 (430)
T ss_dssp EEEGG-GTS-C-SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEEC--SSSSCCEEEEECTTS
T ss_pred EEeCC-Cce-e-eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEc--CCCCcceeEEEcCCC
Confidence 34432 221 0 001111 1234578889994444777777789999999874221 112222 222456889999999
Q ss_pred C-EEEEEeCCCcEEEEecC
Q psy4510 379 P-LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~ 396 (812)
+ ++++-...+.|..++..
T Consensus 282 ~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 282 NYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEeCC
Confidence 9 55555667889998875
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.024 Score=60.38 Aligned_cols=260 Identities=8% Similarity=0.016 Sum_probs=145.1
Q ss_pred CceEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-------cCCCCcEEEeeCCC---
Q psy4510 177 TEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-------SDLKTALQTVDDPF--- 245 (812)
Q Consensus 177 ~~i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-------s~~~~~l~s~~~d~--- 245 (812)
.....|+|+|. .++++++-...+.|++.|+.+..... ....-.........|+| ++++++|+.+...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 35678999983 35555665555678888877654211 11111112346889999 99999777666543
Q ss_pred ----ceEEeeCCCCCCCCCCCCC-ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC-------CCCcceec--
Q psy4510 246 ----QLAEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-------EAGAWQVD-- 311 (812)
Q Consensus 246 ----~i~vwd~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~-------~~~~~~~~-- 311 (812)
.+.+.+..... .....+ ...+.. -....+++.+|++..++++-..++.|..+|+. ++..|...
T Consensus 218 ~~~~~V~~i~r~~~G--~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 218 DESPSVYIIKRNADG--TFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp GGEEEEEEEECCTTS--CCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred ccCceEEEEecCCCC--ceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 24455433210 000001 012221 12345788899764666777778889999987 44421000
Q ss_pred -----ccc-c-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc----cceeecC--Cc---------CCCCe
Q psy4510 312 -----QKP-L-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLP--NA---------HTSDV 369 (812)
Q Consensus 312 -----~~~-~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~--~~---------~~~~v 369 (812)
... + .+.......|+|+|+++.++++-+....|+.++....... ..+.... .+ .-...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 001 1 1223456899999999966666677889998665321100 0011000 00 01123
Q ss_pred E-EEEEc-------CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC------------------------CCCEEEE
Q psy4510 370 N-VISWN-------RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH------------------------TAPVTTV 417 (812)
Q Consensus 370 ~-~l~~~-------~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h------------------------~~~v~~v 417 (812)
. .++.. +.+.++++=.....|+.++.. + .+.++-+. -.....|
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~----G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE----G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT----C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEeCC----C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 3 44443 456666766777889999842 3 34443221 1235789
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++.+++..++++=...++|+.+++....
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 9998633555655667789999987764
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.015 Score=64.35 Aligned_cols=54 Identities=13% Similarity=-0.006 Sum_probs=33.3
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|.|..||+. +++.+...... .++.+-.....+ .+++.++.|+.|+.||.++++
T Consensus 452 ~G~l~A~D~~---tG~~~W~~~~~-~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAI---TGDYKWEKMER-FAVWGGTMATAG-DLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTT---TCCEEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECC---CCCEEeEecCC-CCccCcceEecC-CEEEEECCCCeEEEEECCCCC
Confidence 4678888887 45555555321 111111111223 467778999999999999984
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0013 Score=74.92 Aligned_cols=205 Identities=9% Similarity=-0.101 Sum_probs=114.7
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+..++|++..+.++++-...+.|+.+++.+..........+.........|++.+.+..|..+ ...+.|.+.++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34567889883344445555668899998875210000112222222345678888665555444 45678999887752
Q ss_pred CCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
....+. ........|++.|.+..++++-.. .+.|.+.++..... .......-...+.|+|+|++..
T Consensus 486 --------~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~----~~l~~~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 486 --------KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSGR 553 (699)
T ss_dssp --------CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC----CEESCSSCSSCCCEEECTTTCC
T ss_pred --------ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe----eEEEeCCCCCccEEEEeccCCE
Confidence 223332 222445788999976334444322 26788777764431 1111122345678999998877
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+++.... ...+... .........|++..+ .++++....+.|..++..
T Consensus 554 LY~aD~~~~~I~~~d~dG~~-~~~~~~~-~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 554 LYWVDSKLHSISSIDVNGGN-RKTILED-EKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EEEEETTTTEEEEECSSSSC-CEEECCC-SSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred EEEEecCCCeEEEEccCCCc-eEEEEec-CCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 77777778899999986422 1112111 111122334455433 455565667888888875
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.055 Score=57.44 Aligned_cols=200 Identities=9% Similarity=0.022 Sum_probs=113.4
Q ss_pred CeeeeeEcCC--CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC---C-cEE
Q psy4510 225 SAEDLQWSDL--KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---R-NIH 298 (812)
Q Consensus 225 ~V~~l~~s~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d---g-~i~ 298 (812)
....|+|+|+ +..|..+...+.|+.++..++ .+..+........+++|++++ .++++.... . .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--------~v~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--------YVDIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT--------EEEEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC--------EEEEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEE
Confidence 4568999984 445655554488999998663 344454455668999999999 555554321 1 133
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
..+....... ...+. .......++++|.+..++++-..++.|+.+|..++.....+... .....-..++|+|++
T Consensus 211 ~~~~~~~~~~---~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~--~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 211 LFTRASGFTE---RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM--DTKGSNFHIVWHPTG 284 (433)
T ss_dssp EECGGGTTCC---EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC--SCCSSCEEEEECTTS
T ss_pred EEECCCCeec---ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc--CCCCCcccEEEeCCC
Confidence 3332221110 01111 23345778999944446666667788999998643221112222 122234579999999
Q ss_pred C-EEEEEeCCCcEEEEecCCCCCCC--ceEEcccC---------------CCCEEEEEE---------ccCCCcEEEEEE
Q psy4510 379 P-LIVSGGDDGCIHVWDLRRFKKGS--SVATFKHH---------------TAPVTTVEW---------HPTESSTFASGG 431 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~~~~~~~--~~~~~~~h---------------~~~v~~v~~---------~p~~~~~l~s~~ 431 (812)
+ ++++-...+.|+.+++.... +. ....+.+. -.....+++ .+.+ .++++-.
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~-~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~ 362 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRET-GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDR 362 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTT-CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEET
T ss_pred CEEEEEeCCCCEEEEEeCCCCC-cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEEC
Confidence 8 55555567889998865210 11 01111111 123567888 5544 4555555
Q ss_pred CCCCEEEEEc
Q psy4510 432 ADDQIALWDL 441 (812)
Q Consensus 432 ~dg~v~iwd~ 441 (812)
..++|+.++.
T Consensus 363 ~n~~I~~~~~ 372 (433)
T 4hw6_A 363 DSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEECT
T ss_pred CCCEEEEECC
Confidence 5678888874
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.035 Score=57.21 Aligned_cols=246 Identities=12% Similarity=0.086 Sum_probs=121.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCC---CCcEEEeeC-C-----Cc
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDL---KTALQTVDD-P-----FQ 246 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~-d-----~~ 246 (812)
...+.++|.| +|+++++-. .|.|++++ .+... ................|+|+|+ +..|..+.. . +.
T Consensus 31 ~~P~~ia~~p-dG~l~V~e~-~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIAER-PGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECT-TSCEEEEET-TTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcC-CCeEEEEeC-CCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 4567899999 998666654 58999998 22211 0001112223456789999998 555554443 2 56
Q ss_pred eEEeeCCCCCCCCCCCCCceE-Ec---CCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc--
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFS-FS---GHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA-- 307 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~-~~---~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~-- 307 (812)
|..++...+.. . ..+.+.. +. +.......|+|.|+| .+.++-+. .|.|.-++....-.
T Consensus 107 v~r~~~~~~~~-~-~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 107 VVRLRHLGERG-V-LDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEECSSCE-E-EEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEEEeCCCCc-C-ceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 77777654200 0 0011111 32 111123589999998 55555322 14555555542100
Q ss_pred --c-----eeccccccCCCCCEEEEEEcC-CCCeEEEEEECCCeE------EEEECCCCCc---------------ccce
Q psy4510 308 --W-----QVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSI------RIWDTRVINT---------------KSCM 358 (812)
Q Consensus 308 --~-----~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg~i------~iwd~~~~~~---------------~~~~ 358 (812)
. ........++ .....++|+| ++. ++++-.....+ .|.-+..+.. ..++
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 0 0000011122 2357889999 555 55554433331 1222222110 1112
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC---CceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG---SSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
..+ .+......++| .+|.++++....+.|...++...... .....+..-...+..+++.|+|..++++...+|
T Consensus 262 ~~~--~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 262 YFW--PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp EEC--TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECSTTT
T ss_pred Eec--CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeCCCC
Confidence 222 22234567777 45666666666777888877631110 001222222457899999999853333333333
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.27 Score=50.46 Aligned_cols=240 Identities=14% Similarity=0.167 Sum_probs=152.0
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+-.+| ..++||.-. ..++.|||+++..+. +...- ...|.-=.|-.+.. |+-. .+..|.-|++...
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnle~K~kl----ks~~~-~e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~------ 135 (494)
T 1bpo_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKM----KAHTM-TDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 135 (494)
T ss_dssp EEECS-SSSCEEEEE-TTEEEEEETTTTEEE----EEEEC-SSCCCEEEEEETTE-EEEE-CSSEEEEEESSSS------
T ss_pred eeeCC-CCcEEEEec-CCeEEEEchHHhhhh----cceec-CCCceEEEecCCCe-EEEE-cCCeeEEecccCC------
Confidence 44567 667777655 468999999876532 21111 23455555544433 3222 4577999999763
Q ss_pred CCCceEEcCCC----CcEEEEEecCCCCCEEEEEe------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-
Q psy4510 262 TPPLFSFSGHL----TEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG- 330 (812)
Q Consensus 262 ~~~~~~~~~h~----~~v~~l~~sp~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~- 330 (812)
..|...|..|. ..|..-.-+++.+-++++|- -.|.+.+|..+... .+.+.||.+....+...-+
T Consensus 136 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCS
T ss_pred CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-----cchheeeeeeeEEEecCCCC
Confidence 47888787765 46778888888855555553 25789999998774 6778888776655544322
Q ss_pred -CCeEEEEEECC---CeEEEEECCCCCccc-----ceee--cC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 331 -EKRVLASCSVD---LSIRIWDTRVINTKS-----CMLT--LP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 331 -~~~~l~s~~~d---g~i~iwd~~~~~~~~-----~~~~--~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
...+|+.+... +.++|-++....... .... ++ .+...--.++..++.-.+++.-+.-|.|++||+.
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle-- 288 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 288 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT--
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc--
Confidence 22355555543 789999986431111 0111 11 1223445678888887888888999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++..+..-+-....|..-+-+.... =++.....|.|.--.+....
T Consensus 289 -Tgt~i~~nrIs~~~iF~t~~~~~~~-Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 289 -TGTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp -TCCEEEEEECCSSCEEEEEEETTTT-EEEEEETTCEEEEEEECTTT
T ss_pred -cceeeeeecccCCceEEecccCCCC-cEEEEccCceEEEEEEcccc
Confidence 5777777666667776655554433 34555577877776666543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.18 Score=53.82 Aligned_cols=120 Identities=12% Similarity=0.127 Sum_probs=71.5
Q ss_pred CEEEEEEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE-------cCCCCEEEEEeCCC-c--
Q psy4510 321 SVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW-------NRTEPLIVSGGDDG-C-- 389 (812)
Q Consensus 321 ~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~-------~~~~~~l~sg~~dg-~-- 389 (812)
....|+|.| ++.+++++....+.|++.|+...... .+.............|+| ++++..|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 578999999 46656666666678999998743211 111111112235899999 99998555555443 2
Q ss_pred ----EEEEecCCCCCCC--c-eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 390 ----IHVWDLRRFKKGS--S-VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 390 ----i~iwd~~~~~~~~--~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
|.+++......-. . ...+.... ....++++|++..++++-..++.|..+|+.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 6666633200111 0 01222112 235778899766677777778889999986
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.062 Score=53.99 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=120.2
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC----CCC--EEEEEeC---CCcEEEEeCC
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST----EPG--VLATGDC---KRNIHIWTPR 303 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----~~~--~l~sg~~---dg~i~vwd~~ 303 (812)
|...+++.....+-+.+||+.. +.+..+.. +.++.+..-|. +.. ++++... +++|++|++.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G--------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDG--------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTS--------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred CCccEEEEEcCCCCEEEEcCCC--------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 4445566667788999999943 66666653 56777776662 111 3333333 4789999774
Q ss_pred CCC-cceeccc---cccCCCCCEEEEEE--cCC-CCeEEEEEECCCeEEEEECCCC----CcccceeecCCcCCCCeEEE
Q psy4510 304 EAG-AWQVDQK---PLVGHTNSVEDLQW--SPG-EKRVLASCSVDLSIRIWDTRVI----NTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 304 ~~~-~~~~~~~---~~~~h~~~v~~~~~--~p~-~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~v~~l 372 (812)
... ....... ++..-...+..+|+ +|. +..+++....+|.+..|++... -..+.+.++. -.+.+..|
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~Egc 185 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGM 185 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEE
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceE
Confidence 222 1111101 11111156677888 774 4445777778899999998432 1233445552 24578888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCC--CCCceEEcc-c-CCCCEEEEEEc--cCCCcEEEEEE-CCCCEEEEEcC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFK--KGSSVATFK-H-HTAPVTTVEWH--PTESSTFASGG-ADDQIALWDLA 442 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~~-~-h~~~v~~v~~~--p~~~~~l~s~~-~dg~v~iwd~~ 442 (812)
...+....|+.+-.+.-|..++.+... ..+.+..+. + -...+..|++- +++..+|++++ .++++.+||..
T Consensus 186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 888888899999998777777754311 223444442 2 23478888884 44443555555 57799999986
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.093 Score=52.72 Aligned_cols=202 Identities=9% Similarity=0.068 Sum_probs=117.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC----CCc--EEEee--C--CCceEEeeCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL----KTA--LQTVD--D--PFQLAEHNKKRGKGP 258 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~----~~~--l~s~~--~--d~~i~vwd~~~~~~~ 258 (812)
..+++.....+-+.+||+ .++ .+..+.. +.+..+..-|. |+. |+.++ . ++.|++|++...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~----~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~--- 109 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGK----MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK--- 109 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSC----EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT---
T ss_pred ccEEEEEcCCCCEEEEcC-CCc----EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC---
Confidence 344554455678999999 444 3333432 45555555442 222 33333 3 578999977532
Q ss_pred CCCCCCceEEcC------CC-CcEEEEEe--cCCCC-CEEEEEeCCCcEEEEeCCC---CCcceeccccccCCCCCEEEE
Q psy4510 259 GIPTPPLFSFSG------HL-TEGFAMDW--SSTEP-GVLATGDCKRNIHIWTPRE---AGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 259 ~~~~~~~~~~~~------h~-~~v~~l~~--sp~~~-~~l~sg~~dg~i~vwd~~~---~~~~~~~~~~~~~h~~~v~~~ 325 (812)
..++..+.. .. ..++.+++ +|... .++++...+|.+..|++.. +.......+.+. ..+.+..|
T Consensus 110 ---~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~Egc 185 (355)
T 3amr_A 110 ---NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGM 185 (355)
T ss_dssp ---TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEE
T ss_pred ---CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceE
Confidence 123333321 11 56677777 77542 3688888899999999843 211122334443 34578999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCC--cccceeecCCcC-CCCeEEEEE--cCCCC-EEEEEe-CCCcEEEEecCCC
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVIN--TKSCMLTLPNAH-TSDVNVISW--NRTEP-LIVSGG-DDGCIHVWDLRRF 398 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~v~~l~~--~~~~~-~l~sg~-~dg~i~iwd~~~~ 398 (812)
...+... .|+.+-.+.-|..++.+... ....+..+..++ ...+..|+. .++++ +|++.+ .+.++.+||...
T Consensus 186 vvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~- 263 (355)
T 3amr_A 186 AADDEYG-RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG- 263 (355)
T ss_dssp EEETTTT-EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST-
T ss_pred EEcCCCC-eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC-
Confidence 9998777 48888888776666644221 222333332222 347888888 45555 555554 677999999963
Q ss_pred CCCCceEEc
Q psy4510 399 KKGSSVATF 407 (812)
Q Consensus 399 ~~~~~~~~~ 407 (812)
+.+.+..|
T Consensus 264 -~~~~vg~f 271 (355)
T 3amr_A 264 -KNKYVADF 271 (355)
T ss_dssp -TCCEEEEE
T ss_pred -CCcEEEEE
Confidence 33444444
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0035 Score=71.28 Aligned_cols=224 Identities=9% Similarity=-0.023 Sum_probs=124.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
+.|++.++.+... . .+......+.+|+|.+.+..|..+. ..+.|+.+++...... ......+.........
T Consensus 386 ~~I~~id~~~~~~----~-~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~---~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 386 HEVRKMTLDRSEY----T-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---SSYDTVISRDIQAPDG 457 (699)
T ss_dssp TC-CEECTTSCCE----E-CCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC----CCCCCBCCSCC--CCC
T ss_pred cceEEEeCCCCcc----e-eeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC---cceEEEEeCCCCCcce
Confidence 4677777765431 1 1222234567899998877777665 4678888888751000 0111111111123456
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC-CeEEEEECCCCCccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-LSIRIWDTRVINTKS 356 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~ 356 (812)
|++.+.+..++++-...+.|.+.++..... ...+.........|++.|.+..++++-... +.|...++.... .
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~----~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~- 531 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-I- 531 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCE----EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-C-
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCce----EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-e-
Confidence 788765535555555678899999875531 111122223467889999777555554333 677777765321 1
Q ss_pred ceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 357 CMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 357 ~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..+....-...+.|+|++++. ++++-+..+.|.++++.. .....+. .......+|++.. ..++++...
T Consensus 532 --~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG----~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~ 603 (699)
T 1n7d_A 532 --YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG----GNRKTILEDEKRLAHPFSLAVFE--DKVFWTDII 603 (699)
T ss_dssp --CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS----SCCEEECCCSSSCSSCCCCEEET--TEEEEECST
T ss_pred --eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC----CceEEEEecCCcCCCceEeEEEC--CEEEEEeCC
Confidence 111112234467899998765 555555678899999863 2222221 1112234555544 356666666
Q ss_pred CCCEEEEEcCCC
Q psy4510 433 DDQIALWDLAVE 444 (812)
Q Consensus 433 dg~v~iwd~~~~ 444 (812)
.++|..++..++
T Consensus 604 ~~~V~~~d~~~G 615 (699)
T 1n7d_A 604 NEAIFSANRLTG 615 (699)
T ss_dssp TTCEEEEETTTE
T ss_pred CCeEEEEEccCC
Confidence 788999887655
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.064 Score=55.18 Aligned_cols=240 Identities=8% Similarity=0.023 Sum_probs=118.9
Q ss_pred CceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcc-cccc-cccCCCCCCeeeeeEcCC---CCcEEEee-C------
Q psy4510 177 TEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAW-QVDQ-KPLGGHTNSAEDLQWSDL---KTALQTVD-D------ 243 (812)
Q Consensus 177 ~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~-~~~~-~~l~~h~~~V~~l~~s~~---~~~l~s~~-~------ 243 (812)
...+.|+|.| +|+ ++++- ..|.|++++....... .... ............|+|+|+ +..|..+. .
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e-~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITL-RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEE-TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcC-CCCEEEEEe-CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4578899999 998 66554 4689999975332110 0000 111223456789999996 55554443 2
Q ss_pred -CCceEEeeCCCCCCCCCCCCCceE-E-----cCCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCC
Q psy4510 244 -PFQLAEHNKKRGKGPGIPTPPLFS-F-----SGHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPR 303 (812)
Q Consensus 244 -d~~i~vwd~~~~~~~~~~~~~~~~-~-----~~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~ 303 (812)
...|..+++..........+.+.. + ..|. ...|+|.|++ .+.++-+. .|.|.-.+..
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 234555665432100000011111 1 1122 3579999998 45444332 2456666654
Q ss_pred CCCcc---e-----eccccc-cCCCCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCc-------------------
Q psy4510 304 EAGAW---Q-----VDQKPL-VGHTNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINT------------------- 354 (812)
Q Consensus 304 ~~~~~---~-----~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~------------------- 354 (812)
..-.. . .....+ .+| .....++|.|....++++-.. ++.=.|.-+..+..
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 32000 0 001111 122 346889999943334444322 21122222221110
Q ss_pred ---------ccceeecCCcCCCCeEEEEEcC-------CCCEEEEEeCCCcEEEEecCCCCCCCceEE---cccCCCCEE
Q psy4510 355 ---------KSCMLTLPNAHTSDVNVISWNR-------TEPLIVSGGDDGCIHVWDLRRFKKGSSVAT---FKHHTAPVT 415 (812)
Q Consensus 355 ---------~~~~~~~~~~~~~~v~~l~~~~-------~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~~~h~~~v~ 415 (812)
..++..+ .+......+.|.+ ++.++++....+.|...++.. ...+.. +......+.
T Consensus 252 ~~~~~~~~~~~P~~~~--~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~rp~ 326 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYW--KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG---DKVTEDGRILTDRGQRIR 326 (353)
T ss_dssp CCBSSCTTSCCCSEEE--SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET---TEEEEEEEESGGGCCCEE
T ss_pred ccCCCCCCccCCeEEe--CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC---CeEeeeEEcccCCCCcee
Confidence 0011111 1234567788864 356777776778888888763 222221 223345789
Q ss_pred EEEEccCCCcEEE
Q psy4510 416 TVEWHPTESSTFA 428 (812)
Q Consensus 416 ~v~~~p~~~~~l~ 428 (812)
.|++.|+|. +++
T Consensus 327 ~v~~~pdG~-lyv 338 (353)
T 2g8s_A 327 DVRTGPDGY-LYV 338 (353)
T ss_dssp EEEECTTSC-EEE
T ss_pred EEEECCCCc-EEE
Confidence 999999985 444
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.028 Score=55.98 Aligned_cols=203 Identities=10% Similarity=0.070 Sum_probs=118.2
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC----CC--CCeeeeeE---cCCCCcEEEeeC--------
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG----HT--NSAEDLQW---SDLKTALQTVDD-------- 243 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~----h~--~~V~~l~~---s~~~~~l~s~~~-------- 243 (812)
+++|.+.++.++++.-..|+|..|+...+..... .+.+ .. ..+..|.| .++++++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE---ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 4789884455555555789999999875542211 2222 11 24578999 588777775442
Q ss_pred -----CCceEEeeCC---CCCCCCCCCCCceEEc--CCC-----------CcEEEEEecCCCCCEEEEEeCC-CcEEEEe
Q psy4510 244 -----PFQLAEHNKK---RGKGPGIPTPPLFSFS--GHL-----------TEGFAMDWSSTEPGVLATGDCK-RNIHIWT 301 (812)
Q Consensus 244 -----d~~i~vwd~~---~~~~~~~~~~~~~~~~--~h~-----------~~v~~l~~sp~~~~~l~sg~~d-g~i~vwd 301 (812)
+..+..+|+. ++ +.+.... ... .....++..++| +..++++.. +.|...+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg-------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENS-------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVS 165 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTC-------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEEC
T ss_pred cccCCCCEEEEEcCCcCCCC-------CEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEe
Confidence 5778999998 54 4443322 211 247899999999 777888877 7776666
Q ss_pred CCCCCccee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-c---CCCCeEEE-EEc
Q psy4510 302 PREAGAWQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-A---HTSDVNVI-SWN 375 (812)
Q Consensus 302 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~---~~~~v~~l-~~~ 375 (812)
......... ............+.|+++|++..+++.-+ .|.|..+|++..... .+ .... + .-.....| .--
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~-~v-~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAW-PE-PVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCC-CE-ECEESSCCCCCTTEEEEEEEE
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcce-ee-cccccCCcccccCcccccccc
Confidence 654321000 01111112234679999999996444445 999999998832110 01 1100 1 11223443 333
Q ss_pred CCCCE-EEEEeCCCcEEEEecCC
Q psy4510 376 RTEPL-IVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 376 ~~~~~-l~sg~~dg~i~iwd~~~ 397 (812)
.+|+. +++....+.+.+.+...
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECSST
T ss_pred cCCEEEEEEcCCCCEEEEECCCC
Confidence 46665 56666667666666654
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.27 Score=49.81 Aligned_cols=253 Identities=11% Similarity=0.072 Sum_probs=129.0
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccc-c-cccCCCCCCeeeeeEcCC---CCcEEEe---eCCCce
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-Q-KPLGGHTNSAEDLQWSDL---KTALQTV---DDPFQL 247 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~-~-~~l~~h~~~V~~l~~s~~---~~~l~s~---~~d~~i 247 (812)
....+.|+|.| +|+++++--..|.|++++...+...... . ............|+|+|+ +.+|... ..++.|
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 45678999999 9998888876899999986554321110 1 122334567889999996 3444432 234455
Q ss_pred EEeeCCCCCC--CCC-CCCCce-EEc-CCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc--
Q psy4510 248 AEHNKKRGKG--PGI-PTPPLF-SFS-GHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA-- 307 (812)
Q Consensus 248 ~vwd~~~~~~--~~~-~~~~~~-~~~-~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~-- 307 (812)
.-|.+..+.. ... ..+.+. .+. +.......|.|.|++ .+.++.+. .|.|.-.+....-.
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 5565554210 000 111111 121 111234579999998 55555331 34444444432200
Q ss_pred -ce-eccccccCCCCCEEEEEEcCCCCeEEEEE-ECCCeEEEEECCCCCc---------------ccceeecCCcCCCCe
Q psy4510 308 -WQ-VDQKPLVGHTNSVEDLQWSPGEKRVLASC-SVDLSIRIWDTRVINT---------------KSCMLTLPNAHTSDV 369 (812)
Q Consensus 308 -~~-~~~~~~~~h~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~---------------~~~~~~~~~~~~~~v 369 (812)
.. .....-.+|. ....++|+|++. ++++- +.|+.=.|--+..+.. ..++..+ ..+....
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~-~~~~~ap 265 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW-STDEASP 265 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE-CTTTCCE
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec-CCCCCCC
Confidence 00 0001112343 456899999876 44432 2333223332222111 1112222 1122355
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
..|+|. .+.+++..-..+.|....+..... ......+.+..+.+..|+..|+|..++++...||
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 677776 355666666667777777653211 1223344444578999999999853333333344
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.17 Score=52.02 Aligned_cols=242 Identities=10% Similarity=-0.010 Sum_probs=121.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC---CCcEEEeeC----C----C
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL---KTALQTVDD----P----F 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~----d----~ 245 (812)
...+.++|.| +|+++++-. +|.|++++.. +...................|+|+|+ +..|..+.. + .
T Consensus 29 ~~P~~ia~~p-dG~l~V~e~-~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLVTER-PGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEEEET-TTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEEEeC-CCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4578899999 998666654 5899999733 22111001111223356889999998 555554433 2 5
Q ss_pred ceEEeeCCCCCCCCCCCCCceE-EcC-CCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc---
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFS-FSG-HLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA--- 307 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~--- 307 (812)
.|..++...........+.+.. +.. .......|+|.|++ .+.++-+. .|.|.-.+....-.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 5666766542000000011111 221 11124579999998 55555332 24455555432100
Q ss_pred ce-eccccccCCCCCEEEEEEcC-CCCeEEEEEECCC---eEEEEECCCCCc---------------ccceeecCCcCCC
Q psy4510 308 WQ-VDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDL---SIRIWDTRVINT---------------KSCMLTLPNAHTS 367 (812)
Q Consensus 308 ~~-~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg---~i~iwd~~~~~~---------------~~~~~~~~~~~~~ 367 (812)
.. .......++ .....++|+| ++. ++++-.... .|.+.. .+.. ..++..+. ....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~ 259 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG-SETW 259 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCC
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-CCCc
Confidence 00 000111223 2356899999 555 555433222 233322 1110 01122221 1234
Q ss_pred CeEEEEEc-------CCCCEEEEEeCCCcEEEEecCCCCCCCce--EEc-ccCCCCEEEEEEccCCCcEEEEE
Q psy4510 368 DVNVISWN-------RTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATF-KHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 368 ~v~~l~~~-------~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--~~~-~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
....++|. .+|.++++....+.|...++.. .+... ..+ ......+..+++.|++. ++++.
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~--~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~ 329 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD--NMEVRKISTFFKNVFGRLRDVVIDDDGG-ILIST 329 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG--GGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEE
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC--CCcccceeeeccCCCCCeeEEEECCCCc-EEEEE
Confidence 57788884 4566777766777888888863 11221 222 22245789999999874 54444
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.028 Score=55.97 Aligned_cols=160 Identities=13% Similarity=0.185 Sum_probs=101.9
Q ss_pred CcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccccccC-----C-CCCEEEEEE---cCCCCeEEEEEE---
Q psy4510 273 TEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVG-----H-TNSVEDLQW---SPGEKRVLASCS--- 339 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~-----h-~~~v~~~~~---~p~~~~~l~s~~--- 339 (812)
.--.+++|.+.. ++|..++ ..++|..|+...+....+ .+.+ . ...+..|.| .|+++ ++++..
T Consensus 13 ~yPE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~ 87 (334)
T 2p9w_A 13 LTPEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAK 87 (334)
T ss_dssp CCCSCEEEETTT-TEEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETT
T ss_pred cCCcCccCcCCC-CEEEEEeccCCEEEEEcCCCCeEEEE---ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccc
Confidence 334588998876 5555555 789999999975542222 2221 1 114689999 68865 666543
Q ss_pred ----------CCCeEEEEECC---CCCcccceeecC---Cc-------CCCCeEEEEEcCCCCEEEEEeCC-CcEEEEec
Q psy4510 340 ----------VDLSIRIWDTR---VINTKSCMLTLP---NA-------HTSDVNVISWNRTEPLIVSGGDD-GCIHVWDL 395 (812)
Q Consensus 340 ----------~dg~i~iwd~~---~~~~~~~~~~~~---~~-------~~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~ 395 (812)
.+..|..+|+. ++..... ..+. .+ -....+.++..++|+..++++.. +.|...+.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 26789999988 4332211 1110 00 11358899999999988888888 88777776
Q ss_pred CCCCCCCceEEcc------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 396 RRFKKGSSVATFK------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 396 ~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
. ++.+..+. ......+.|+++|++. +|++....|.|..+|+..
T Consensus 167 d----G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 167 D----GKTVSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp T----SCCEEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEECSS
T ss_pred C----CCEEeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcCCC
Confidence 4 33333221 1122367999999985 555555599999999873
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.34 Score=49.65 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=63.2
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccccCCCCCEEEEEEcCC---CCeEEEEEECC-----C
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVEDLQWSPG---EKRVLASCSVD-----L 342 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~d-----g 342 (812)
-.....|+|.|++ . |+.+...|.|++++ .+....+. ...+.........|+|+|+ +..++++-... +
T Consensus 30 l~~P~~ia~~pdG-~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPDG-G-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTTS-C-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCCC-e-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3456799999998 4 44556679999998 33211110 1112223456899999998 55556655543 6
Q ss_pred eEEEEECCCCC--cccceee-cC--CcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 343 SIRIWDTRVIN--TKSCMLT-LP--NAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 343 ~i~iwd~~~~~--~~~~~~~-~~--~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.|..++..... ....+.. ++ .........|+|.|+|.++++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 77778775321 0111221 32 11112346899999998666543
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.22 Score=50.72 Aligned_cols=200 Identities=14% Similarity=0.065 Sum_probs=111.3
Q ss_pred EEeCCCCCCeEEEec------------CCCcEEEEccCCCCcccccccc----cCCCCCCeeeeeEcC--CCC-cEEEee
Q psy4510 182 MDWSSTEPGVLATGD------------CKRNIHIWTPREAGAWQVDQKP----LGGHTNSAEDLQWSD--LKT-ALQTVD 242 (812)
Q Consensus 182 ~~~sp~~~~~lat~~------------~dg~v~iwd~~~~~~~~~~~~~----l~~h~~~V~~l~~s~--~~~-~l~s~~ 242 (812)
++..| +|..+++++ .+|.|.++|+.+.......+.. +.........+.+.+ +++ +|..+.
T Consensus 55 i~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 55 LEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 44567 665555542 6899999998753221111111 111234555666644 343 455553
Q ss_pred C---CCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeC-----------------CCcEEEEe
Q psy4510 243 D---PFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDC-----------------KRNIHIWT 301 (812)
Q Consensus 243 ~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~-----------------dg~i~vwd 301 (812)
. ...+.+|++..... ....+.++.+.. ...+.+.+.++| .+.++... .|.|..++
T Consensus 134 h~~~~s~ielf~~d~~~~---~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEK---SLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp CSTTCCEEEEEEEETTTT---EEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCCeEEEEEEECCCC---EEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 2 45677887765310 112233344322 357899999987 56666541 23454454
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPL 380 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~ 380 (812)
. +. ...+...-...+.++|+|+++.++++-+..+.|..|++...........+ ........++..+ +|++
T Consensus 210 ~--~~-----~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 210 P--ND-----VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp T--TC-----CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTTCCE
T ss_pred C--Ce-----EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCCCcE
Confidence 4 22 11222223457899999999987777778899999998742222112222 1245567888998 5887
Q ss_pred EEEEeCC-CcEEEEec
Q psy4510 381 IVSGGDD-GCIHVWDL 395 (812)
Q Consensus 381 l~sg~~d-g~i~iwd~ 395 (812)
.+++..+ +.|..|+.
T Consensus 281 wva~~~~g~~v~~~~P 296 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEESCHHHHHSCCT
T ss_pred EEEecCCceEEEEECC
Confidence 7766533 34444444
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.98 Score=46.22 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=62.5
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccccCCCCCEEEEEEcCC---CCeEEEEEEC---C---
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVEDLQWSPG---EKRVLASCSV---D--- 341 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~---d--- 341 (812)
-....+|+|.|++ . |+.+..+|.|++++. .+. ..+. .............|+++|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG-~-l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-R-YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETT-E-EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCC-e-EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456799999997 4 555666799999973 222 1111 0111222356899999998 5545555543 3
Q ss_pred -CeEEEEECCCCC----cccceee-cCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 342 -LSIRIWDTRVIN----TKSCMLT-LPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 342 -g~i~iwd~~~~~----~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
..|..|+..... ....+.. ++.........|+|.|+|.++++-+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 567777765321 0111111 2211122346799999998666643
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.5 Score=48.06 Aligned_cols=176 Identities=10% Similarity=0.026 Sum_probs=96.9
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcC-----CCCcEEEEEecC--CCCCEEEEEe-C--CCcEEEEeCCCCCcceecc
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSG-----HLTEGFAMDWSS--TEPGVLATGD-C--KRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp--~~~~~l~sg~-~--dg~i~vwd~~~~~~~~~~~ 312 (812)
.+|.|.++|.++... ..+. ..+.+ ..-....+.+.+ ++..+|+.+. . +.+|.+|++..........
T Consensus 81 ~~G~I~~~d~~~~~~---~~~~-l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 81 KSGKILLMDLNEKEP---AVSE-LEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp -CCEEEEEETTSSSC---CEEE-CEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEecCCCCC---ceEE-EEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE
Confidence 688899999875310 1111 12332 223566777766 3433455553 2 4678898887654433333
Q ss_pred ccccCC-CCCEEEEEEcCCCCeEEEEEE-----------------CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 313 KPLVGH-TNSVEDLQWSPGEKRVLASCS-----------------VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 313 ~~~~~h-~~~v~~~~~~p~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
..+.+. -...+++.+.++|. +.++.. ..|.|..+|.. . +..+ ...-..-+.++|
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~---~~~~-~~~l~~pNGia~ 228 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---D---VRVV-AEGFDFANGINI 228 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---C---CEEE-EEEESSEEEEEE
T ss_pred eccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEECC---e---EEEe-ecCCcccCcceE
Confidence 444432 24689999999997 455543 12445555542 1 1111 122345799999
Q ss_pred cCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEEC
Q psy4510 375 NRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGGA 432 (812)
Q Consensus 375 ~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~ 432 (812)
+|+++.|+.+ +..+.|..|++...........+ ...+..-.+++.+ +| ++.+++..
T Consensus 229 spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G-~lwva~~~ 286 (355)
T 3sre_A 229 SPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG-DLWVGCHP 286 (355)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC-CEEEEEES
T ss_pred CCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC-cEEEEecC
Confidence 9999865554 45789999998631111111223 2234556677777 35 45554443
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.10 E-value=1.5 Score=44.83 Aligned_cols=248 Identities=8% Similarity=0.030 Sum_probs=123.2
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE----EcCCCCcEEEEEecCC---CCCEEEEEeC----
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS----FSGHLTEGFAMDWSST---EPGVLATGDC---- 293 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----~~~h~~~v~~l~~sp~---~~~~l~sg~~---- 293 (812)
.-..|+|.|+|+.|..+...+.|++++..... ..++.. +.........|+|+|+ +..+.++-..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~-----~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGL-----SAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEE-----CCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCce-----eeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 45789999999845556677899988753310 011111 1122346789999996 4234444322
Q ss_pred ---CCcEEEEeCCCCCc----ceeccccc-----cCCCCCEEEEEEcCCCCeEEEEEEC-------------CCeEEEEE
Q psy4510 294 ---KRNIHIWTPREAGA----WQVDQKPL-----VGHTNSVEDLQWSPGEKRVLASCSV-------------DLSIRIWD 348 (812)
Q Consensus 294 ---dg~i~vwd~~~~~~----~~~~~~~~-----~~h~~~v~~~~~~p~~~~~l~s~~~-------------dg~i~iwd 348 (812)
...|..|++..... ..+....+ ..|. ...|+|.|+|. ++++.+. .|.|.-++
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 23566666654321 11111111 1232 36799999995 5555433 24666666
Q ss_pred CCCCCc-----------ccceeecCCcCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEecCCC-----------------
Q psy4510 349 TRVINT-----------KSCMLTLPNAHTSDVNVISWNR-TEPLIVSGG-DDGCIHVWDLRRF----------------- 398 (812)
Q Consensus 349 ~~~~~~-----------~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~-~dg~i~iwd~~~~----------------- 398 (812)
....-. ...+.. .++ .....++|+| .+.++++-. .++.=.|.-+...
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a--~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~ 247 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWS--YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGF 247 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEE--ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSS
T ss_pred CCCCCCCCCCCcCCCCCCccEEE--EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCC
Confidence 652100 111111 233 2367899999 565444322 1211122211100
Q ss_pred -----------CCCCceEEcccCCCCEEEEEEccC------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 399 -----------KKGSSVATFKHHTAPVTTVEWHPT------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 399 -----------~~~~~~~~~~~h~~~v~~v~~~p~------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
....++..+..| .....+.|... ...++++.-..+.|...++...+.. .
T Consensus 248 ~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~-------------~ 313 (353)
T 2g8s_A 248 KIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT-------------E 313 (353)
T ss_dssp CCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE-------------E
T ss_pred ccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe-------------e
Confidence 001223333333 45678888642 1246666556677777777633110 0
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
...+.......+..+++.|++. +++++....-.+|+
T Consensus 314 ~~~~~~~~~~rp~~v~~~pdG~-lyv~td~~~g~I~r 349 (353)
T 2g8s_A 314 DGRILTDRGQRIRDVRTGPDGY-LYVLTDESSGELLK 349 (353)
T ss_dssp EEEESGGGCCCEEEEEECTTSC-EEEEECSTTEEEEE
T ss_pred eEEcccCCCCceeEEEECCCCc-EEEEEeCCCCEEEE
Confidence 1111112234789999999975 44444333334443
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.02 E-value=0.5 Score=48.57 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=70.6
Q ss_pred cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee--------ccccc-----c-CCCCCEEEEEEcCCCCe--EEEE
Q psy4510 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV--------DQKPL-----V-GHTNSVEDLQWSPGEKR--VLAS 337 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~--------~~~~~-----~-~h~~~v~~~~~~p~~~~--~l~s 337 (812)
.+..+..||+| .+||..+. ..|.|-.+..+..... ..+.+ . ....+|..+.|+|-+.. .|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 56779999999 77777764 6899998874321000 00111 1 13568999999997643 6888
Q ss_pred EECCCeEEEEECCCCCcccceeecC--------CcCCCCeEEEEEcCCCCEEEE--EeCCCcEEE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLP--------NAHTSDVNVISWNRTEPLIVS--GGDDGCIHV 392 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~~~~v~~l~~~~~~~~l~s--g~~dg~i~i 392 (812)
-..|+.||+||+..... .+. .+. ......|.+++|.+++-.|+. .+..|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~-~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQE-KPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTS-CCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCC-CCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999985221 111 111 122356788888875432322 334454443
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.6 Score=55.57 Aligned_cols=233 Identities=14% Similarity=0.188 Sum_probs=132.8
Q ss_pred eCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCC--CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 184 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT--NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 184 ~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
.+| ..++||.-. ..++.|||+++..+ +..|. .+|.-=.|-.... |+-. .+..|.-|++...
T Consensus 73 MnP-~~~iiALra-g~~lQiFnl~~k~k-------lks~~~~e~VvfWkWis~~~-l~lV-T~~aVyHW~~~~~------ 135 (1630)
T 1xi4_A 73 MNP-ASKVIALKA-GKTLQIFNIEMKSK-------MKAHTMTDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 135 (1630)
T ss_pred cCC-CcceEEEec-CCeEEEeehHHhhh-------hcccccCCCceEEEecCCCe-eEEE-cCCeEEEeccCCC------
Confidence 445 555555544 46899999987652 33332 3455555544443 2222 3567999999753
Q ss_pred CCCceEEcCC----CCcEEEEEecCCCCCEEEEEe------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc--C
Q psy4510 262 TPPLFSFSGH----LTEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS--P 329 (812)
Q Consensus 262 ~~~~~~~~~h----~~~v~~l~~sp~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--p 329 (812)
..|...|..| ...|..-.-+++.+-++++|- -.|.+.+|.++.+. .+.+.||.+....+... +
T Consensus 136 s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~iegha~~F~~~~~~~~~ 210 (1630)
T 1xi4_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNA 210 (1630)
T ss_pred CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-----chhhhHhHhhhheeccCCCC
Confidence 3666666665 456777788888855555553 35889999988764 66777887765555442 2
Q ss_pred CCCeEEEEEEC---CCeEEEEECCCCCccccee-------ecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 330 GEKRVLASCSV---DLSIRIWDTRVINTKSCML-------TLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 330 ~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~-------~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
....+|+.+.. .+.++|-++.....+.... .++ .....--.++..++.-.++..-+.-|.|+++|+.
T Consensus 211 ~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~-- 288 (1630)
T 1xi4_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 288 (1630)
T ss_pred CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc--
Confidence 22334444333 2789999986431111111 111 1112234456777776788888899999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
++..+..-+-...+|...+-+..... ++.....|.|.--.+.
T Consensus 289 -t~~~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 289 -TGTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVE 330 (1630)
T ss_pred -cchhhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEc
Confidence 45555444433444444333322212 2333345555444433
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=95.58 E-value=4.5 Score=46.36 Aligned_cols=489 Identities=11% Similarity=0.022 Sum_probs=233.4
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|.++.-.. +|. |-.|+.+| +..||-..-.. ....-......|.++....++. |-.++.+| +..||..+.
T Consensus 21 ~n~V~~I~qD~-~G~-lWigT~~G-L~ryDG~~~~~---~~~~~~~~~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDS-EGL-IWIGSNKG-LFSYDGYSTQQ---HFTYGENNNTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECT-TSC-EEEEESSC-EEEECSSCEEE---CSCTTSTTSSCEEEEEEETTTE-EEEEETTE-EEEEETTTT
T ss_pred cceEEEEEECC-CCC-EEEEECCC-ccccCCCceEE---EEccCCCCCceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCC
Confidence 46799998766 554 44455566 56676322110 0000112245688888777664 44555544 778887764
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
. .... .......|.++.. .+ +.|..|+.+ -|..++..+............-....|.++....++. +.
T Consensus 93 ~-----f~~~--~~~~~~~i~~i~~-~~--g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lW 160 (758)
T 3ott_A 93 R-----YEQP--ETDFPTDVRTMAL-QG--DTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IY 160 (758)
T ss_dssp E-----ECCC--SCCCCSCEEEEEE-ET--TEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC-EE
T ss_pred E-----EECc--ccCCCceEEEEEe-cC--CcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC-EE
Confidence 1 1110 0111235666654 33 455566655 5888888765421110000011234688888888887 33
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCc---CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-cCC
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNA---HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHT 411 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~ 411 (812)
.++.. -|..++....... ....... ....|.++...+++..|..|+. +-|..+|... . .+..+. ...
T Consensus 161 -igt~~-Gl~~~~~~~~~~~--~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~---~-~~~~~~~l~~ 231 (758)
T 3ott_A 161 -VGTYN-GLCRYIPSNGKFE--GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST---G-QIKQTEAFHN 231 (758)
T ss_dssp -EEETT-EEEEEETTTTEEE--EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT---T-EEEEEEEEEE
T ss_pred -EEeCC-CHhhCccCCCceE--EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC---C-eEEeccCCCC
Confidence 35544 5777887632111 1111110 1234888888877775555654 4588888753 2 222221 113
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..|.++....++. |..|+.+ -+.+++........ ....+.. ........|.++....++ .+.+++ .
T Consensus 232 ~~i~~i~~d~~g~--lWigT~~-Gl~~~~~~~~~~~~-------~~~~~~~--~~~l~~~~i~~i~~D~~g-~lWiGT-~ 297 (758)
T 3ott_A 232 NSIKSLALDGNGD--LLAGTDN-GLYVYHNDTTPLQH-------IIHDSRN--IQSLTNNIIWNIFADQEH-NIWLGT-D 297 (758)
T ss_dssp EEEEEEEECTTCC--EEEEETT-EEEEECCTTSCCEE-------ECCCTTC--TTSCSCSCEEEEEECTTC-CEEEEE-S
T ss_pred CeEEEEEEcCCCC--EEEEeCC-ceeEEecCCCcEEE-------EEcCCCC--cCcCCcCeEEEEEEcCCC-CEEEEe-C
Confidence 3578887777653 4555554 47888876542100 0000000 000112357888777765 344544 4
Q ss_pred CCeEEEEeCCCCCcccEEe-----ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCC
Q psy4510 492 SGFNIFRTISDLPSQLLFI-----HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESE 566 (812)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 566 (812)
.|+.++.. . ........ ......|.++....+ +.+-.....+. +. +.... .... ........
T Consensus 298 ~Gl~~~~~-~-~~~~~~~~~~~~~~~~~~~v~~i~~D~~--g~lWiGt~~Gl--~~-~~~~~---~~~~-~~~~~~~~-- 364 (758)
T 3ott_A 298 YGISLSRY-N-SALQFIPISQITGTGDGNQFYSLFRDSK--GFYWFGGANGL--IR-FTDPA---GERH-DAIWYRMG-- 364 (758)
T ss_dssp SSEEEECC-C-C-CEEEEHHHHSCSCCCCBEEEEEECTT--CCEEEEETTEE--EE-ESCTT---SSCC-CCEEECTT--
T ss_pred Cccccccc-C-CceeEEecccCCCCCCCceEEEEEEcCC--CCEEEeeCCcc--ee-ecccc---cccc-eeEEeccC--
Confidence 46544321 1 11111110 011235777766655 33333333321 11 11000 0000 00000000
Q ss_pred CCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCC
Q psy4510 567 GSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPT 646 (812)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (812)
.. .. .-....|.++.-..+|...+ | + ++-|..|+..++.-.
T Consensus 365 ---------~~--~~--~l~~~~v~~i~~d~~g~lWi-g--t-~~GL~~~~~~~~~~~---------------------- 405 (758)
T 3ott_A 365 ---------DK--TY--PLSHNRIRHIYEDKEQQLWI-A--T-DGSINRYDYATRQFI---------------------- 405 (758)
T ss_dssp ---------CS--SS--CCSCSCEEEEEECTTSCEEE-E--E-TTEEEEEETTTTEEE----------------------
T ss_pred ---------Cc--CC--CCCCCceEEEEECCCCCEEE-E--e-CCcHhhcCcCCCcEE----------------------
Confidence 00 00 00123578888777776544 4 3 356888888765311
Q ss_pred CCeeeec----CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC----------------------CceeEEEEecCC
Q psy4510 647 PPLFSFS----GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE----------------------AGAWSVYLYTNR 700 (812)
Q Consensus 647 ~~~~~~~----gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~----------------------~~~~~~~~~s~d 700 (812)
...... -....|.++...+ ++.+.+ |+..+-|.+++..+ +..+..++...+
T Consensus 406 -~~~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 482 (758)
T 3ott_A 406 -HYNIVDNTGTYNTNWTYYIFEDT-AGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNE 482 (758)
T ss_dssp -EEEEECCC--CBSSSEEEEEECT-TSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTT
T ss_pred -EeecCCCcCCCCCceEEEEEEcC-CCCEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCC
Confidence 000000 0124678888777 554444 44444455555331 111333455677
Q ss_pred CCEEE-eecCCCeEEEeecCCCCCccccc-ccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 701 FGVLA-TGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 701 g~~la-sgs~dg~i~iwd~~~~~~~~~~~-~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
|++.+ .|+. +-|..++..+++- .... ..+. ....|.++....+|. +.+.. ..| +..++.+..
T Consensus 483 g~lWi~~~t~-~Gl~~~d~~~~~~-~~~~~~~~~-~~~~~~~i~~d~~g~-lWigt-~~G-l~~~~~~~~ 546 (758)
T 3ott_A 483 GNVWVLLYNN-KGIDKINPRTREV-TKLFADELT-GEKSPNYLLCDEDGL-LWVGF-HGG-VMRINPKDE 546 (758)
T ss_dssp SCEEEEETTC-SSEEEEETTTTEE-EEECTTTSC-GGGCEEEEEECTTSC-EEEEE-TTE-EEEECC--C
T ss_pred CCEEEEccCC-CCcEEEeCCCCce-EEecCCCcC-CCcccceEEECCCCC-EEEEe-cCc-eEEEecCCC
Confidence 77665 3444 4577888776531 1010 0011 124678888888898 45443 344 677775544
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=95.41 E-value=2.2 Score=43.86 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=89.3
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 281 sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
+.++ ..++.+- ++.||.-++..... .+.+.-. -..|..+..+|+|. +||..+ +..|.|-.+..+....
T Consensus 29 ~~n~-t~i~~a~-~n~iR~~~i~~~~~----Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 29 SQNG-TRIVFIQ-DNIIRWYNVLTDSL----YHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNV 100 (452)
T ss_dssp ETTT-TEEEEEE-TTEEEEEETTTCSS----CEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCC
T ss_pred EcCC-CEEEEEE-CCEEEEEECCCCCc----ceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccC
Confidence 3444 4555543 37788888875432 2222211 23578899999999 466554 5689998886321111
Q ss_pred ---------ceeecCCc-----CCCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcc---------cC
Q psy4510 357 ---------CMLTLPNA-----HTSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFK---------HH 410 (812)
Q Consensus 357 ---------~~~~~~~~-----~~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---------~h 410 (812)
....+.-+ ...+|..+.|+|-+ ..|++-..|+.|++||+... ...+. .+. ..
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s-~~~P~-~L~k~~~~fg~d~~ 178 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS-QEKPI-VLNKPNNSFGLDAR 178 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT-TSCCE-EESCCCSEEESCSS
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC-CCCCc-chhccccccCCCcc
Confidence 11122111 35789999999976 48999999999999999851 12233 222 23
Q ss_pred CCCEEEEEEccCCCcEEEEEE--CCCCEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGG--ADDQIAL 438 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~--~dg~v~i 438 (812)
...|.+++|.+++ ..|...+ ..|.|.-
T Consensus 179 ~~ev~S~~Fg~~~-lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 179 VNDITDLEFSKDG-LTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CCCEEEEEECTTS-SCEEEEECTTSCEEEE
T ss_pred cceEEEEEEcCCC-cEEEEEecCCCCCEEE
Confidence 3578889998853 5555544 5565543
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.18 E-value=1.1 Score=44.50 Aligned_cols=235 Identities=11% Similarity=0.100 Sum_probs=109.4
Q ss_pred CCCeEEEec-CC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCCC
Q psy4510 188 EPGVLATGD-CK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~-~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~~ 256 (812)
++.+++.|| .+ ..+.+||+.+.+-.. ...+........++ .-+++.++.|+.+ ..+.+||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF--LPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE--CCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe--CCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 455666666 32 368888887654211 11122111111122 2356667777654 358888887752
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
.. ..+.+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+.+ ++
T Consensus 90 ~~--~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~ 160 (301)
T 2vpj_A 90 DG--VWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQ-WSML-GDMQTAREGAGLVVA--SG 160 (301)
T ss_dssp TC--CCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE-EEEE-EECSSCCBSCEEEEE--TT
T ss_pred CC--eeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCe-EEEC-CCCCCCcccceEEEE--CC
Confidence 00 01111111111111112222 34 567777653 358889987653 4332 122211111122222 44
Q ss_pred CeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCC
Q psy4510 332 KRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKG 401 (812)
Q Consensus 332 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~ 401 (812)
. +++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.... .
T Consensus 161 ~-iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W 234 (301)
T 2vpj_A 161 V-IYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATK-RSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS-W 234 (301)
T ss_dssp E-EEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE-E
T ss_pred E-EEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcc-cccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc-E
Confidence 4 77777654 458889987532 2222222111 112223333 46677777764 468899987421 1
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
..+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--R-GRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--C-CEEEEEcCcCCCcccccEEEEcCCCC
Confidence 111111111111122222 3 35777777653 4677777654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.94 E-value=1.3 Score=44.05 Aligned_cols=231 Identities=12% Similarity=0.112 Sum_probs=105.7
Q ss_pred CCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 259 (812)
+.+++.||.+ ..+.+||+.+..- .. ...+......-.++. -+++.++.|+.+ ..+.+||..+..
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~-~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--- 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERW-HQ-VAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--- 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEE-EE-ECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTE---
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcE-eE-cccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCc---
Confidence 4455556543 3577888776542 11 111211111111222 256666777644 347778876641
Q ss_pred CCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-----cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
...+..+......-.++.+ ++ .+++.|+.++ .+.+||+.+.. |... ..+.........+.+ ++. +
T Consensus 89 --W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~~-i 158 (302)
T 2xn4_A 89 --WTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNE-WFHV-APMNTRRSSVGVGVV--GGL-L 158 (302)
T ss_dssp --EEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTE-EEEE-CCCSSCCBSCEEEEE--TTE-E
T ss_pred --eeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCe-Eeec-CCCCCcccCceEEEE--CCE-E
Confidence 1111111111111112222 33 5777777553 57788887653 4332 122211111122222 343 6
Q ss_pred EEEEECC-------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCC
Q psy4510 335 LASCSVD-------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKGS 402 (812)
Q Consensus 335 l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~ 402 (812)
++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.... ..
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 233 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTR-RSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA-WR 233 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE-EE
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccc-cccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC-Ee
Confidence 7776542 358889987532 2222222111 112223333 46677777764 368899986411 11
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
.+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 234 ~~~~~~~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 234 QVADMNMCRRNAGVCAV--N-GLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred eCCCCCCccccCeEEEE--C-CEEEEECCcCCCcccccEEEEcCCCC
Confidence 11111111111122222 2 35777777653 4788888765
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=94.92 E-value=2 Score=45.48 Aligned_cols=113 Identities=14% Similarity=0.178 Sum_probs=62.7
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cc-ccc--CCCCCEEEEEEcCC---CCeEEEEEEC----
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QK-PLV--GHTNSVEDLQWSPG---EKRVLASCSV---- 340 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~-~~~--~h~~~v~~~~~~p~---~~~~l~s~~~---- 340 (812)
-...++|+|.|++ .++++--..+.|++++...+....+. .. .+. ........|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456799999998 55555443346888876544321111 11 111 12456789999996 5545555543
Q ss_pred --------CCeEEEEECCCCC----ccccee-ecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 341 --------DLSIRIWDTRVIN----TKSCML-TLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 341 --------dg~i~iwd~~~~~----~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
...|.-++..... ....+. .+..........|+|.|+|.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543211 111222 23222234578999999999666544
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=94.86 E-value=4.8 Score=42.61 Aligned_cols=112 Identities=8% Similarity=0.032 Sum_probs=61.6
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC------CCCCCeeeeeEcCC---CCcEEEeeC---
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG------GHTNSAEDLQWSDL---KTALQTVDD--- 243 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~s~~---~~~l~s~~~--- 243 (812)
....+.|+|.| +|+++++-...+.|++++..++... ....+. ........|+|+|+ +..|..+..
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~--~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVK--TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEe--EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 35678999999 9998888765557888876544321 111111 13466789999996 555544432
Q ss_pred ----------CCceEEeeCCCCCCCCCCCCCceE-EcC-CCCcEEEEEecCCCCCEEEEE
Q psy4510 244 ----------PFQLAEHNKKRGKGPGIPTPPLFS-FSG-HLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 244 ----------d~~i~vwd~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~sg 291 (812)
...|..++...........+.+.. +.. .......|+|.|+| .+.++.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~ 161 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTI 161 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEE
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEE
Confidence 134555554332100000111221 221 12347899999999 454443
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=94.77 E-value=0.58 Score=43.30 Aligned_cols=158 Identities=12% Similarity=0.066 Sum_probs=83.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc--ccccccccC--CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQKPLG--GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~--~~~~~~~l~--~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
..+..++|+| +|.+.|+ .+|.++-.+..+... +......+. +-.. -.++.|.++|.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 4566899999 9998888 567766666543221 100101110 1111 478999999987777 5588877765
Q ss_pred CCCC-CCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC--cceecccccc-CCCCCEEEEEE
Q psy4510 253 KRGK-GPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--AWQVDQKPLV-GHTNSVEDLQW 327 (812)
Q Consensus 253 ~~~~-~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~~~~-~h~~~v~~~~~ 327 (812)
.+.. ..++. . -..+ .+-=..+..|.+.|+| .+.+.. |+.++-+...+.. .|......+. +.-....-+.|
T Consensus 115 P~~~~~~Wl~-~-a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 115 PQSDTDNWIA-R-ATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp CCSTTCCHHH-H-SEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred CcCCCCceec-c-ccEeccCCCCceEEEEECCCc-eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 3321 00000 0 0011 1111568999999997 454444 7876544443222 1211111111 22234556779
Q ss_pred cCCCCeEEEEEECCCeEEEEECC
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
.+++. ++++. +| ++|-..
T Consensus 190 ~~~G~-l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 190 SSVGT-LFGVQ--GG--KFYEDY 207 (236)
T ss_dssp CTTSC-EEEEE--TT--EEEEES
T ss_pred CCCCc-EEEEe--CC--eEEecC
Confidence 99887 44443 67 444443
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=1.2 Score=41.29 Aligned_cols=107 Identities=10% Similarity=0.016 Sum_probs=62.5
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC--------EEEEEEcCCCCeEEEEEECCCeE
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS--------VEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~--------v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
..+..++|+|++ .+.+. .+|.++-.+..+... ..+.+.... -.++.|.|++. +.++ .||.|
T Consensus 41 ~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~-----~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDN-----DNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKL 109 (236)
T ss_dssp TTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTT-----CCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEE
T ss_pred ccceeEEECCCc-cEEEE--eCCeEEEECCCCCCc-----ccccccccEecccccccceEEEECCCCC-EEEe--CCCEE
Confidence 366799999976 44444 667766666544321 111111222 37899999997 4444 56999
Q ss_pred EEEECCCCCccccee---ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy4510 345 RIWDTRVINTKSCML---TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i 392 (812)
.-++..+.....-+. .+-...-..+..|.+.|+|.+.+.. |+.+.-
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 877753321111111 1101112468999999999877666 776443
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.41 E-value=2.5 Score=42.01 Aligned_cols=230 Identities=9% Similarity=0.050 Sum_probs=107.4
Q ss_pred CeEEEecC--CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEEeeCCCCCCCCCCCC
Q psy4510 190 GVLATGDC--KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAEHNKKRGKGPGIPTP 263 (812)
Q Consensus 190 ~~lat~~~--dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~ 263 (812)
.+++.||. ...+.+||..+.+-.. +..+......-.++. -+++.++.|+.+ ..+.+||..+.. ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~-----W~ 83 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTD--IRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDS-----WY 83 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEE--CCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTE-----EE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEec--CCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCe-----EE
Confidence 35555654 3568888887654211 111221111112222 356666777644 557788877641 11
Q ss_pred CceEEcCCCCcEEEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 264 ~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+.+ ++. +++.
T Consensus 84 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~~-iyv~ 155 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTES-WHTK-PSMLTQRCSHGMVEA--NGL-IYVC 155 (306)
T ss_dssp EEECCSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTE-EEEE-CCCSSCCBSCEEEEE--TTE-EEEE
T ss_pred ECCCCCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCc-eEeC-CCCcCCcceeEEEEE--CCE-EEEE
Confidence 11111111111112222 33 577777765 468899988753 4332 112111111122222 344 6666
Q ss_pred EEC---------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCc
Q psy4510 338 CSV---------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKGSS 403 (812)
Q Consensus 338 ~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~ 403 (812)
|+. -..+.+||+.+.. ...+..++.. ...-.++.+ ++++++.|+.+ ..+.+||+.... ...
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~ 230 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEA-RKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKM 230 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE-EEE
T ss_pred CCCCCCCCcccccceEEEeCCCCCe-EEECCCccch-hhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc-EEE
Confidence 653 3458889987532 1222222111 112222232 56677777654 358889986411 111
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECC-----CCEEEEEcCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGAD-----DQIALWDLAVE 444 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~v~iwd~~~~ 444 (812)
+..+.........+.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 231 ~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 231 VSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 1111111122223333 23678888754 35777777665
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=94.39 E-value=4.8 Score=40.58 Aligned_cols=115 Identities=11% Similarity=0.088 Sum_probs=66.1
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec--cccccCCCCCEEEEEEcCC---CCeEEEEEE--CCC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD--QKPLVGHTNSVEDLQWSPG---EKRVLASCS--VDL 342 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~~~~~p~---~~~~l~s~~--~dg 342 (812)
..-...+.|+|.|++ .++++--..|.|++++...+....+. ...+.........|+++|+ +..+.++-+ .++
T Consensus 29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 334567899999998 56666544899999986554421111 1122334567899999995 443444433 345
Q ss_pred eEEEEECCCCC-------ccccee-ecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 343 SIRIWDTRVIN-------TKSCML-TLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 343 ~i~iwd~~~~~-------~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.|.-|.+.... ....+. .++.........|.|.|+|.++++.+
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 56666654311 111111 23222223456799999998666644
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=94.27 E-value=2.3 Score=42.34 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=107.3
Q ss_pred CCCeEEEecC----CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC----C-----CceEEeeCCC
Q psy4510 188 EPGVLATGDC----KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD----P-----FQLAEHNKKR 254 (812)
Q Consensus 188 ~~~~lat~~~----dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~----d-----~~i~vwd~~~ 254 (812)
++.+++.||. -..+.+||..+..-... ..+......- +++. -+++.++.|+. + ..+.+||..+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL--ADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC--CCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC--CCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 5667777763 23688888876542111 1111111111 2222 25666666664 2 3577888776
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.. ...+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.. |.... .+......-..+.+
T Consensus 100 ~~-----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~-~~p~~r~~~~~~~~-- 167 (308)
T 1zgk_A 100 NQ-----WSPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPERDE-WHLVA-PMLTRRIGVGVAVL-- 167 (308)
T ss_dssp TE-----EEECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETTTTE-EEECC-CCSSCCBSCEEEEE--
T ss_pred Ce-----EeECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCCCCe-EeECC-CCCccccceEEEEE--
Confidence 42 1111111111111112222 34 566776643 468889987653 33321 22211112222223
Q ss_pred CCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCC
Q psy4510 330 GEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFK 399 (812)
Q Consensus 330 ~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~ 399 (812)
++ .+++.|+.+ ..+.+||+.+.. ...+..++. ......++.+ ++.+++.|+.+ ..+.+||+....
T Consensus 168 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NR-LLYAVGGFDGTNRLNSAECYYPERNE-WRMITAMNT-IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTTE-EEECCCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCcCceEEEEeCCCCe-EeeCCCCCC-ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 34 477777654 458889987532 111222211 1122233333 56677777764 468999986421
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
...+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 243 -W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 243 -WTFVAPMKHRRSALGITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp -EEECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred -EEECCCCCCCccceEEEEE--C-CEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1111111111111122222 2 35777777543 4667777654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.78 E-value=1.6 Score=43.65 Aligned_cols=185 Identities=10% Similarity=0.099 Sum_probs=88.5
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-----C------CceEEeeCCCCCCCC
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-----P------FQLAEHNKKRGKGPG 259 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-----d------~~i~vwd~~~~~~~~ 259 (812)
+++.|+ ..+.+||..+.+ +.. ..+..........+...+++.++.|+. . ..+.+||..+..-..
T Consensus 7 l~~~GG--~~~~~yd~~~~~-W~~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE-CYC--ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETTTTE-EEE--EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCCCCe-Eec--CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 455666 478999988765 221 222222222233333456777777773 1 126677776642111
Q ss_pred CCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC--------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK--------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
....|.. ..+| +++.. ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+. -++
T Consensus 82 ~~~~p~~-r~~~-----~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~--~~~ 149 (315)
T 4asc_A 82 MPPLPSP-RCLF-----GLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFK-WGES-DPLPYVVYGHTVLS--HMD 149 (315)
T ss_dssp CCCBSSC-EESC-----EEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTE-EEEC-CCCSSCCBSCEEEE--ETT
T ss_pred CCCCCcc-hhce-----eEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCc-EeEC-CCCCCcccceeEEE--ECC
Confidence 1111100 0111 22222 33 566777642 458899987753 4332 22221111112222 234
Q ss_pred CeEEEEEEC-C-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCC
Q psy4510 332 KRVLASCSV-D-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRR 397 (812)
Q Consensus 332 ~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~ 397 (812)
. +++.|+. + ..+.+||+.+.. ...+..++.. ...-.++.+ ++++++.|+.++ .+.+||+.+
T Consensus 150 ~-iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 150 L-VYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPMQTA-RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp E-EEEECCBCTTSCBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred E-EEEEeCCCCCCcccceEEEEeCCCCe-EEECCCCCCc-hhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 3 7777776 2 468899987532 1122222111 111222333 567777787654 478888864
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=93.23 E-value=8.8 Score=39.66 Aligned_cols=250 Identities=12% Similarity=0.037 Sum_probs=115.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCC----cEEEEccCCCCcccccccc--cCC--------CCCCeeeeeEcCC--CCcEEE
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKR----NIHIWTPREAGAWQVDQKP--LGG--------HTNSAEDLQWSDL--KTALQT 240 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg----~v~iwd~~~~~~~~~~~~~--l~~--------h~~~V~~l~~s~~--~~~l~s 240 (812)
..|.++++.|.+...|..++..| .|... .+.+..+...... +.. +...|.+|++.|. ...|.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56899999985556555555444 34332 2333333222211 111 2235888999873 455666
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEc----------------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFS----------------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~----------------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
+...+.|...+-... ..+.+..+. .....+.+|.+.|..+..|..+...+.|...+ ..
T Consensus 134 g~~~ggl~~S~DgG~-----tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-Dg 207 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGA-----SWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DA 207 (394)
T ss_dssp EEETTEEEEESSTTS-----BCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-ST
T ss_pred EecCCcEEEEcCCCC-----CeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CC
Confidence 655555444422111 111111110 12245789999985445555554445444432 22
Q ss_pred CCcceeccccccC-C--------CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee-cCCcCCCCeEEEEE
Q psy4510 305 AGAWQVDQKPLVG-H--------TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT-LPNAHTSDVNVISW 374 (812)
Q Consensus 305 ~~~~~~~~~~~~~-h--------~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~l~~ 374 (812)
+..|......... + ...+.+|.+.|.....|..+...+ |...+-. +.+...+.. ++......+.++++
T Consensus 208 G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~ 285 (394)
T 3b7f_A 208 GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVV 285 (394)
T ss_dssp TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEE
T ss_pred CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEE
Confidence 3334332211111 0 135899999997433466666544 4443321 111111111 11100134577888
Q ss_pred cCCC-CEEEEEeC-----------CCcEEEEecCCCCCCCceEEcc-cCC--C-----CEEEEEEccCCCcEEEEEECCC
Q psy4510 375 NRTE-PLIVSGGD-----------DGCIHVWDLRRFKKGSSVATFK-HHT--A-----PVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 375 ~~~~-~~l~sg~~-----------dg~i~iwd~~~~~~~~~~~~~~-~h~--~-----~v~~v~~~p~~~~~l~s~~~dg 434 (812)
+|.. ..|+.+.. ++...||.... .++....+. +-. . ....++++|.++..|+.++.++
T Consensus 286 ~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~D--gG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g 363 (394)
T 3b7f_A 286 HQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRD--AGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGG 363 (394)
T ss_dssp CSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESS--TTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTS
T ss_pred CCCCCCEEEEEeccCCccceeecCCCceeEEEECC--CCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCC
Confidence 8643 33444431 33345665543 222222221 100 0 1135788886545566666555
Q ss_pred CEE
Q psy4510 435 QIA 437 (812)
Q Consensus 435 ~v~ 437 (812)
.|.
T Consensus 364 ~l~ 366 (394)
T 3b7f_A 364 EIW 366 (394)
T ss_dssp CEE
T ss_pred eEE
Confidence 554
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=92.58 E-value=17 Score=41.37 Aligned_cols=473 Identities=9% Similarity=0.019 Sum_probs=226.2
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.|.++.. . ++. |..|+.+ -+..++..+..........-......|.++....++...+ +... -+..++..++
T Consensus 104 ~i~~i~~-~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~-- 175 (758)
T 3ott_A 104 DVRTMAL-Q-GDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG-- 175 (758)
T ss_dssp CEEEEEE-E-TTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT--
T ss_pred eEEEEEe-c-CCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC--
Confidence 4666653 3 444 4445544 5778887654421110000011235688888877777655 3443 4667776553
Q ss_pred CCCCCCCceEEc--C----CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 258 PGIPTPPLFSFS--G----HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 258 ~~~~~~~~~~~~--~----h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
....+. . ....|.++...+++ +.|-.|.. +-|..++..+..... ...+ ....|.++...+++
T Consensus 176 ------~~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~~~~~--~~~l--~~~~i~~i~~d~~g 243 (758)
T 3ott_A 176 ------KFEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTGQIKQ--TEAF--HNNSIKSLALDGNG 243 (758)
T ss_dssp ------EEEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTTTEEEE--EEEE--EEEEEEEEEECTTC
T ss_pred ------ceEEecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCCCeEEe--ccCC--CCCeEEEEEEcCCC
Confidence 111111 0 12347888877765 44444543 458888877653111 1111 12458888888888
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeec----CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTL----PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
. |..|+. +-+.+++..+.... ..... ..-....|.++....+|.+. .|+..| +.++... ........
T Consensus 244 ~--lWigT~-~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~---~~~~~~~~ 314 (758)
T 3ott_A 244 D--LLAGTD-NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTDYG-ISLSRYN---SALQFIPI 314 (758)
T ss_dssp C--EEEEET-TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEE-EEESSS-EEEECCC---C-CEEEEH
T ss_pred C--EEEEeC-CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeCCc-ccccccC---CceeEEec
Confidence 7 444554 45788887643211 11100 01123468999888877643 455556 5554332 11111111
Q ss_pred c-----cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee------cCCCceeEE
Q psy4510 408 K-----HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH------LGQKEIKEL 476 (812)
Q Consensus 408 ~-----~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~ 476 (812)
. .....|.++.-..++. |..|+.+| +..++........ ...+.+ .....|.++
T Consensus 315 ~~~~~~~~~~~v~~i~~D~~g~--lWiGt~~G-l~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~v~~i 378 (758)
T 3ott_A 315 SQITGTGDGNQFYSLFRDSKGF--YWFGGANG-LIRFTDPAGERHD-------------AIWYRMGDKTYPLSHNRIRHI 378 (758)
T ss_dssp HHHSCSCCCCBEEEEEECTTCC--EEEEETTE-EEEESCTTSSCCC-------------CEEECTTCSSSCCSCSCEEEE
T ss_pred ccCCCCCCCceEEEEEEcCCCC--EEEeeCCc-ceeecccccccce-------------eEEeccCCcCCCCCCCceEEE
Confidence 1 1234688888777653 55555555 6666654421100 000100 112357788
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeec----CCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHL----GQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTST 552 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 552 (812)
.-..++. +.+++ .+|+..|............... ....|.++...+++ .+.+++...+...+..-.... .
T Consensus 379 ~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT~~~Gl~~~~~~~~~~---~ 452 (758)
T 3ott_A 379 YEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWISTCLGGIFVVDKHKLMQ---S 452 (758)
T ss_dssp EECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTS-EEEEEESSSCEEEEEHHHHHH---C
T ss_pred EECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEECCCceEEEccccccc---c
Confidence 7777653 44444 5677777654332111111111 12356777666552 234444344443332110000 0
Q ss_pred ccccccccccccCCCCCCccccCCCccceEEe---c-ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCc
Q psy4510 553 EEDNERELEDDESEGSGDEDRRKDPVMNSYFI---R-HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDP 628 (812)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~ 628 (812)
. .. .+. ...... + ....|.++...++|...+.+ +..+-|..++..+..-.
T Consensus 453 ~--~~-~~~-----------------~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~--~t~~Gl~~~d~~~~~~~---- 506 (758)
T 3ott_A 453 T--SG-QYI-----------------AEQNYSVHNGLSGMFINQIIPDNEGNVWVLL--YNNKGIDKINPRTREVT---- 506 (758)
T ss_dssp C--SS-EEE-----------------CSEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTCSSEEEEETTTTEEE----
T ss_pred C--Cc-cee-----------------cccccccccccccceeeeEEEcCCCCEEEEc--cCCCCcEEEeCCCCceE----
Confidence 0 00 000 000000 0 12358888888888866633 23345777887655311
Q ss_pred ccccccccccCCCCCCCCCCeeeec----CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce------------e
Q psy4510 629 FQLAEHNKKRGKGPGIPTPPLFSFS----GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------------W 692 (812)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~----gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~------------~ 692 (812)
.+. .....+.++.... ++.+.+.. ..| +..++..+++. +
T Consensus 507 ----------------------~~~~~~~~~~~~~~~i~~d~-~g~lWigt-~~G-l~~~~~~~~~~~~~~~~gl~~~~i 561 (758)
T 3ott_A 507 ----------------------KLFADELTGEKSPNYLLCDE-DGLLWVGF-HGG-VMRINPKDESQQSISFGSFSNNEI 561 (758)
T ss_dssp ----------------------EECTTTSCGGGCEEEEEECT-TSCEEEEE-TTE-EEEECC--CCCCBCCCCC---CCE
T ss_pred ----------------------EecCCCcCCCcccceEEECC-CCCEEEEe-cCc-eEEEecCCCceEEecccCCCccce
Confidence 110 0123577787777 56555443 444 66677654321 1
Q ss_pred EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEE-ecCCceeEEeeccCCceEE
Q psy4510 693 SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW-SPGEKRVLASCSVDRSNRI 762 (812)
Q Consensus 693 ~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~f-s~dg~~~L~s~s~Dg~i~i 762 (812)
..+.. .+|+ |-.++..| +..++..+.+. ..+.-....+....+ .++|. |.-|+.+|.+++
T Consensus 562 ~~i~~-~~g~-lWi~t~~G-l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~G~--l~fG~~~Gl~~f 622 (758)
T 3ott_A 562 LSMTC-VKNS-IWVSTTNG-LWIIDRKTMDA-----RQQNMTNKRFTSLLFDPKEDC--VYLGGADGFGIS 622 (758)
T ss_dssp EEEEE-ETTE-EEEEESSC-EEEEETTTCCE-----EEC--CCCCCSEEEEETTTTE--EEEECBSEEEEE
T ss_pred EEEEE-CCCC-EEEECCCC-eEEEcCCCcee-----EEecCCCCceeeeEEECCCCc--EEEecCCceEEE
Confidence 12222 3454 44444555 77778776542 111111122333444 35776 666777776544
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=92.13 E-value=5.8 Score=39.25 Aligned_cols=177 Identities=6% Similarity=-0.036 Sum_probs=88.3
Q ss_pred eeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 229 LQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 229 l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
.+|++++++|+-.. .++.-.||.+... ......+..+.. .+|++++..+..+......|.+-++..+.
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d------Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID------GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT------SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC------CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 36778999888765 3444445544332 133444544433 45677884444454446778888876654
Q ss_pred cceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 307 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
. ...+. +... ..+.|++..++.+-..++ .|..-++... .. ..+ . ...+ ..|+|++.+|+-+.
T Consensus 179 ~----~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~--~~--~~L-t--~~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 179 E----ALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP--NP--VVL-T--EANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp E----EEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC--CC--EEC-S--CSCE--EEEEEETTEEEEEE
T ss_pred E----EEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC--Ce--EEE-e--CCCc--ceEEECCCEEEEEE
Confidence 2 11122 2222 345688986555543332 4545455422 21 222 1 2233 34777888776553
Q ss_pred C--CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 386 D--DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 386 ~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
. .+.|..-++. +.....+... .+..+ ++.+..+..+--..+.|..-+
T Consensus 242 ~~~~~~i~~~~~D----G~~r~~l~~~--~~~~i--~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 242 GGDNPALCVVKND----GTGFKELAKG--EFCNI--NVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp CSSSCEEEEEETT----SCCCEEEEES--CEEEE--EECSSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEEECC----CCccEEeeCC--ccceE--EEeCCEEEEEECCCCeEEEEE
Confidence 2 3556666664 3333333221 24444 444444444443445544433
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.98 E-value=4.9 Score=39.60 Aligned_cols=190 Identities=9% Similarity=0.093 Sum_probs=93.6
Q ss_pred CCCeEEEecCC-----CcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCC
Q psy4510 188 EPGVLATGDCK-----RNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRG 255 (812)
Q Consensus 188 ~~~~lat~~~d-----g~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~ 255 (812)
++.+++.||.+ ..+.+||+.+... +... ..+......-.++. -+++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-APMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 67788888755 4688999877651 2111 12221111112222 256666777643 34777887664
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
....+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+ +
T Consensus 139 -----~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~-~~~p~~r~~~~~~~~--~ 206 (301)
T 2vpj_A 139 -----QWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTG-HWTNV-TPMATKRSGAGVALL--N 206 (301)
T ss_dssp -----EEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTT-EEEEE-CCCSSCCBSCEEEEE--T
T ss_pred -----eEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCC-cEEeC-CCCCcccccceEEEE--C
Confidence 11222222111111112222 34 577777654 46889998775 34432 122211112222222 3
Q ss_pred CCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 331 EKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 331 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
+ .+++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+..
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSMTTP-RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCCCc-EEECCCCCCc-ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC
Confidence 3 477777764 468899987532 2222222111 112223333 56677777765 3567788753
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=91.86 E-value=13 Score=38.35 Aligned_cols=219 Identities=11% Similarity=0.107 Sum_probs=130.6
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
...|.|-|+.....+ .++...+ -+.-.+|..+.||-=. ..++.|+|+++. ..+..+.-. ..|.-
T Consensus 47 ~~~vvIiDl~~~~~~--~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K-------~klks~~~~-e~Vvf 110 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNP--IRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMK-------SKMKAHTMT-DDVTF 110 (494)
T ss_dssp CCEEEEEETTSTTSC--EEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTT-------EEEEEEECS-SCCCE
T ss_pred CCeEEEEECCCCCcc--eeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHh-------hhhcceecC-CCceE
Confidence 457889998886642 1122211 1344457776665543 788999999884 445554433 35656
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEE------CCCeEEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCS------VDLSIRIW 347 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~------~dg~i~iw 347 (812)
-.|-.. ..|+-.+ +..|+-|++..... +.+.+..| ...|..-..+++.+.++++|- ..|.+.+|
T Consensus 111 WkWis~--~~l~lVT-~taVyHWsi~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 111 WKWISL--NTVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp EEEEET--TEEEEEC-SSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCC--CeEEEEc-CCeeEEecccCCCC---chhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 677655 3555544 46899999976432 22222222 357888888999996665553 34778899
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCC---CEEEEEeCC---CcEEEEecCCCCCCCc-----eEE-cc---cCCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTE---PLIVSGGDD---GCIHVWDLRRFKKGSS-----VAT-FK---HHTA 412 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~d---g~i~iwd~~~~~~~~~-----~~~-~~---~h~~ 412 (812)
..... .-..+ .+|......+....+. ++++.+... +.++|-++.....+.+ ... +- .-.+
T Consensus 185 S~er~----~sQ~i-eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D 259 (494)
T 1bpo_A 185 SVDRK----VSQPI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (494)
T ss_dssp ESTTC----CEEEE-CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred ecccc----ccchh-eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence 98732 12223 5665555444433222 144444443 7899999864211111 111 11 1133
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
--.++..++.. .++..-+.-|.|.+||+.++
T Consensus 260 FPvamqvs~ky-gviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 260 FPVAMQISEKH-DVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp CEEEEEEETTT-TEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEecccC-CEEEEEecCceEEEEecccc
Confidence 34678888876 47888888999999999998
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.43 E-value=4.8 Score=39.72 Aligned_cols=189 Identities=12% Similarity=0.096 Sum_probs=90.6
Q ss_pred CCCeEEEecCC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEEeeCCCCCC
Q psy4510 188 EPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF-----QLAEHNKKRGKG 257 (812)
Q Consensus 188 ~~~~lat~~~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~vwd~~~~~~ 257 (812)
++.+++.||.+ ..+.+||..+..-.. ...+......-.++. -+++.++.|+.++ .+.+||..+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~- 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS--VANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNE- 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEE--ECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTE-
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceee--CCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCe-
Confidence 67788888754 358888887654211 111221111112222 2566667776543 46677876641
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
...+..+...... .+++.. ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+ +
T Consensus 136 ----W~~~~~~p~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~-~~~p~~r~~~~~~~~--~ 204 (302)
T 2xn4_A 136 ----WFHVAPMNTRRSS-VGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNATTN-EWTYI-AEMSTRRSGAGVGVL--N 204 (302)
T ss_dssp ----EEEECCCSSCCBS-CEEEEE-TT-EEEEECCEETTTTEECCCEEEEETTTT-EEEEE-CCCSSCCBSCEEEEE--T
T ss_pred ----EeecCCCCCcccC-ceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCCCC-cEEEC-CCCccccccccEEEE--C
Confidence 1111111111111 122222 33 566666542 45889998765 34332 122211111222222 3
Q ss_pred CCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCC
Q psy4510 331 EKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRR 397 (812)
Q Consensus 331 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~ 397 (812)
+ .+++.|+.+ ..+.+||+.+.. ...+..++... ....++.+ ++.+++.|+.++ .+.+||+.+
T Consensus 205 ~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 205 N-LLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADMNMCR-RNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp T-EEEEECCBSSSSBCCCEEEEETTTTE-EEEECCCSSCC-BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred C-EEEEECCCCCCcccceEEEEeCCCCC-EeeCCCCCCcc-ccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCC
Confidence 4 477777764 368899987532 22222221111 11222222 566777777653 478888863
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.28 E-value=10 Score=38.47 Aligned_cols=65 Identities=9% Similarity=-0.040 Sum_probs=33.7
Q ss_pred CCCeEEEecCC-CcEEEEccCC-CCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeC-C---------CceEEeeCCC
Q psy4510 188 EPGVLATGDCK-RNIHIWTPRE-AGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDD-P---------FQLAEHNKKR 254 (812)
Q Consensus 188 ~~~~lat~~~d-g~v~iwd~~~-~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~-d---------~~i~vwd~~~ 254 (812)
++.+++.||.+ ..+.+||+.. ...+.. ...+. .....-.++. -+++.++.|+. + ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAF--IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEE--ETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeE-CCCCCCCcCccceEEE--ECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 66777777643 4688888864 233321 22222 1111111222 24666666665 2 3577888876
Q ss_pred C
Q psy4510 255 G 255 (812)
Q Consensus 255 ~ 255 (812)
.
T Consensus 96 ~ 96 (357)
T 2uvk_A 96 N 96 (357)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=91.20 E-value=6.2 Score=39.30 Aligned_cols=103 Identities=11% Similarity=0.183 Sum_probs=50.1
Q ss_pred CEEEEEeCC-------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC------CCeEEEEECCCC
Q psy4510 286 GVLATGDCK-------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV------DLSIRIWDTRVI 352 (812)
Q Consensus 286 ~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~------dg~i~iwd~~~~ 352 (812)
.+++.|+.+ ..+.+||+.+. .|.... .+......-..+. .++. +++.|+. -..+.+||+.+.
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~~-~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAA-KWSEVK-NLPIKVYGHNVIS--HNGM-IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTT-EEEEEC-CCSSCEESCEEEE--ETTE-EEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCC-CEeECC-CCCCcccccEEEE--ECCE-EEEEcCCCCCCCccceEEEEcCCCC
Confidence 577777654 24788888765 343321 1111111111122 2444 6676654 235889998753
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 186 ~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 186 D-WKDLAPMKTP-RSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp E-EEEECCCSSC-CBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred E-EEECCCCCCC-cccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC
Confidence 2 1222222111 111222332 46677777654 3467888864
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=90.88 E-value=31 Score=41.53 Aligned_cols=220 Identities=10% Similarity=0.100 Sum_probs=123.3
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
...|.|-|+..+..+ .++...+ -+.-.+|..+.||-= ...++.|+++.+. ..+.++.- ...|.-
T Consensus 47 ~~~vvIidl~~~~~~--~rrpi~A-----dsAIMnP~~~iiALr-ag~~lQiFnl~~k-------~klks~~~-~e~Vvf 110 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNP--IRRPISA-----DSAIMNPASKVIALK-AGKTLQIFNIEMK-------SKMKAHTM-TDDVTF 110 (1630)
T ss_pred CceEEEEECCCCCCc--ccccccc-----hhhccCCCcceEEEe-cCCeEEEeehHHh-------hhhccccc-CCCceE
Confidence 447888898876542 1121211 123334666655443 4788999999874 44444433 245666
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEE------CCCeEEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCS------VDLSIRIW 347 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~------~dg~i~iw 347 (812)
-.|-... .|+-.+ +..|..|++..... +.+.+..| ...|..-..+++.+.++++|- ..|.+.+|
T Consensus 111 WkWis~~--~l~lVT-~~aVyHW~~~~~s~---P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 111 WKWISLN--TVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred EEecCCC--eeEEEc-CCeEEEeccCCCCc---cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 6776654 444333 36799999975332 33344444 456777788899986655553 35788999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCC---CCEEEEEeC---CCcEEEEecCCCCCCCceE------Eccc---CCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRT---EPLIVSGGD---DGCIHVWDLRRFKKGSSVA------TFKH---HTA 412 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~---dg~i~iwd~~~~~~~~~~~------~~~~---h~~ 412 (812)
.+....+ ..+ .+|.+....+..... ..+++.+.. .+.++|-++.....+.+.. .+-. -.+
T Consensus 185 S~er~~s----Q~i-egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~D 259 (1630)
T 1xi4_A 185 SVDRKVS----QPI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (1630)
T ss_pred ecccccc----hhh-hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccC
Confidence 8863221 112 455444333332211 113332222 2689999885421111111 1111 122
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
--.++..++.. .++..-+.-|.|.++|+.++.
T Consensus 260 fpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 260 FPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred cceEEEecccc-CEEEEEecCceEEEEecccch
Confidence 23467777765 377777888999999999984
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.48 E-value=6.2 Score=38.98 Aligned_cols=189 Identities=9% Similarity=0.094 Sum_probs=92.0
Q ss_pred CCCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------CceEEeeCCCCCC
Q psy4510 188 EPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------FQLAEHNKKRGKG 257 (812)
Q Consensus 188 ~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~~i~vwd~~~~~~ 257 (812)
++.+++.||.+ ..+.+||+.+..-.. ...+......-.++. -+++.++.|+.+ ..+.+||..+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~- 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYS--KLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTES- 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEE--EECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTE-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEE--CCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCc-
Confidence 66788888754 568888887754211 111211111112222 256666777654 347788877641
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
...+..+......-.++.+ ++ .+++.|+. -..+.+||+.+. .|.... .+......-..+.+
T Consensus 130 ----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~-~~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 130 ----WHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELC-PMIEARKNHGLVFV- 199 (306)
T ss_dssp ----EEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTTT-EEEEEC-CCSSCCBSCEEEEE-
T ss_pred ----eEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCCC-eEEECC-CccchhhcceEEEE-
Confidence 1111111110111112222 33 56666653 345889998876 344322 22211111122222
Q ss_pred CCCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 329 PGEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 329 p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
++. +++.|+.+ ..+.+||+.+.. ...+..++ .......++.+ ++.+++.|+.+ ..+.+||+..
T Consensus 200 -~~~-i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 200 -KDK-IFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMP-WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp -TTE-EEEECCEETTEEBCCEEEEETTTTE-EEECCCCS-CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred -CCE-EEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCC-CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 344 67777653 468889987532 22222221 11222333333 56688888754 4577888763
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=89.01 E-value=8.2 Score=38.21 Aligned_cols=188 Identities=11% Similarity=0.070 Sum_probs=90.5
Q ss_pred CCCeEEEecC----C-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCC
Q psy4510 188 EPGVLATGDC----K-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKK 253 (812)
Q Consensus 188 ~~~~lat~~~----d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~ 253 (812)
++.+++.||. + ..+.+||+.+..-.. ...+......-.++.+ +++.++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP--CAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE--CCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE--CCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCC
Confidence 6677777776 2 457888887654211 1112211111222222 56666666633 357788877
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+.. ...+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+
T Consensus 146 ~~~-----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~-~~~p~~r~~~~~~~~- 214 (308)
T 1zgk_A 146 RDE-----WHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERN-EWRMI-TAMNTIRSGAGVCVL- 214 (308)
T ss_dssp TTE-----EEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTT-EEEEC-CCCSSCCBSCEEEEE-
T ss_pred CCe-----EeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCC-eEeeC-CCCCCccccceEEEE-
Confidence 642 1111111111111112222 33 677777654 46889998765 34332 122211122222333
Q ss_pred CCCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecC
Q psy4510 329 PGEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLR 396 (812)
Q Consensus 329 p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~ 396 (812)
++ .+++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.
T Consensus 215 -~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 215 -HN-CIYAAGGYDGQDQLNSVERYDVETET-WTFVAPMKHR-RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp -TT-EEEEECCBCSSSBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred -CC-EEEEEeCCCCCCccceEEEEeCCCCc-EEECCCCCCC-ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCC
Confidence 34 477777764 568899987532 1122222111 112222222 46677777754 346777775
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=87.51 E-value=19 Score=40.53 Aligned_cols=201 Identities=12% Similarity=0.011 Sum_probs=98.5
Q ss_pred CCCeEEEecCC----CcEEEEccCCCCccccccc----ccCCCCCCeeeeeEcCCCCcEEEeeCCC------ceEEeeCC
Q psy4510 188 EPGVLATGDCK----RNIHIWTPREAGAWQVDQK----PLGGHTNSAEDLQWSDLKTALQTVDDPF------QLAEHNKK 253 (812)
Q Consensus 188 ~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~----~l~~h~~~V~~l~~s~~~~~l~s~~~d~------~i~vwd~~ 253 (812)
++.+++.||.+ ..+.+||+.+..-...... .+......-.++.+..+++.++.|+.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 67788888753 4688888877642211100 0111111222233322777777777432 46778877
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccc--cccCCCCCEEEEEEcC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSP 329 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~--~~~~h~~~v~~~~~~p 329 (812)
+.. ...+..+.... .-.+++...++ .+++.|+.++ .+.+||+.+. .|..... .+........++.+..
T Consensus 477 t~~-----W~~~~~~p~~R-~~h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~-~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 477 TRE-----WSMIKSLSHTR-FRHSACSLPDG-NVLILGGVTEGPAMLLYNVTEE-IFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp TTE-----EEECCCCSBCC-BSCEEEECTTS-CEEEECCBCSSCSEEEEETTTT-EEEECCCSSGGGGSCCBSCEEEEET
T ss_pred CCc-----EEECCCCCCCc-ccceEEEEcCC-EEEEECCCCCCCCEEEEECCCC-ceEEccCCCCCCCcccceeEEEEeC
Confidence 641 11111111111 11123332344 6788887654 6999998875 3443321 1111122223455565
Q ss_pred CCCeEEEEEEC--C-----CeEEEEECCCCCc-----ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC--------Cc
Q psy4510 330 GEKRVLASCSV--D-----LSIRIWDTRVINT-----KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--------GC 389 (812)
Q Consensus 330 ~~~~~l~s~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--------g~ 389 (812)
....+++.|+. + ..+.+||+.+..- ...+...+........++.+ .++.+++.||.+ ..
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCe
Confidence 53447777765 2 4688999886431 11111111111112222322 236677777743 45
Q ss_pred EEEEecCC
Q psy4510 390 IHVWDLRR 397 (812)
Q Consensus 390 i~iwd~~~ 397 (812)
|.+||+..
T Consensus 628 v~~yd~~t 635 (695)
T 2zwa_A 628 IISLDPLS 635 (695)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 77888763
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=84.29 E-value=33 Score=33.68 Aligned_cols=121 Identities=4% Similarity=-0.113 Sum_probs=63.6
Q ss_pred EEeccCCeEEEEee--cCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe
Q psy4510 594 RTCQYGSTTLAGVW--GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 671 (812)
Q Consensus 594 ~~s~~g~~l~~~~~--~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~ 671 (812)
.+++++++|+-... .....|+.-++.... ...+..+.. .+|+|++..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--------------------------~~~lt~~~~----~~~~~~g~~i 159 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE--------------------------KKKIKNHYL----FTCNTSDRYF 159 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC--------------------------CEEEESSCC----CCSEEETTEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC--------------------------eEEEeCCCc----eEeeEECCEE
Confidence 67889998887621 234455555555432 122322322 4566733334
Q ss_pred EEecCCCceEEEEecCCCceeEE------EEecCCCCEEEeecCC--CeEEEeecCCCCCcccccccccCCCcceeEeEE
Q psy4510 672 LATGDCKRNIHIWTPREAGAWSV------YLYTNRFGVLATGDCK--RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 743 (812)
Q Consensus 672 las~s~Dg~v~iWd~~~~~~~~~------~~~s~dg~~lasgs~d--g~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~f 743 (812)
..+.....+|.+-++.++....+ ..+.|++++|+-.... ..|..-++..... ..+.. ..+ ..|
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-----~~Lt~--~~~--~~~ 230 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-----VVLTE--ANI--EHY 230 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-----EECSC--SCE--EEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcCCCcEEEEEECCCCCe-----EEEeC--CCc--ceE
Confidence 44544456777777665432221 2355888888766543 3555555554432 22322 123 347
Q ss_pred ecCCceeEEee
Q psy4510 744 SPGEKRVLASC 754 (812)
Q Consensus 744 s~dg~~~L~s~ 754 (812)
+|++++ |.-+
T Consensus 231 ~~~g~~-Iy~~ 240 (302)
T 3s25_A 231 NVYGSL-IFYQ 240 (302)
T ss_dssp EEETTE-EEEE
T ss_pred EECCCE-EEEE
Confidence 888884 5544
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=83.33 E-value=18 Score=38.18 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=64.1
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc--ceecc-cccc-----CCCCCEEEEEEcCC---CCeEEEEEECC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQ-KPLV-----GHTNSVEDLQWSPG---EKRVLASCSVD 341 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~-~~~~-----~h~~~v~~~~~~p~---~~~~l~s~~~d 341 (812)
..-+.|+|.|++...|+++...|.|++++...... ....+ ..+. ........|+|+|+ ...+.++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 34579999999843566667889999997543211 00011 1111 12457889999996 33345544321
Q ss_pred ------------CeEEEEECCCCC-------cccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 342 ------------LSIRIWDTRVIN-------TKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 342 ------------g~i~iwd~~~~~-------~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
..|.-|.+.... ....+..+. .........|+|.|+|.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 134445554211 112233322 12223468899999998666665543
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=83.26 E-value=19 Score=36.42 Aligned_cols=23 Identities=17% Similarity=0.499 Sum_probs=16.3
Q ss_pred CCCeEEEecC-C---------CcEEEEccCCCC
Q psy4510 188 EPGVLATGDC-K---------RNIHIWTPREAG 210 (812)
Q Consensus 188 ~~~~lat~~~-d---------g~v~iwd~~~~~ 210 (812)
++.+++.||. + ..+.+||+.+..
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 6677777776 2 468888887754
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=81.64 E-value=50 Score=33.79 Aligned_cols=228 Identities=9% Similarity=0.024 Sum_probs=103.1
Q ss_pred CCeEEEecCCCcEEEEccCC-CCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCC----ceEEeeCCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPF----QLAEHNKKRGKGPGIPT 262 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~-~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~----~i~vwd~~~~~~~~~~~ 262 (812)
...|..|+..| +.+++... +..+...... .-...|.+|++.| +...|.++...+ .|...+ +.+. ..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~--~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~----tW 93 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPV--FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGG----NW 93 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEE--STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTS----CC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCcc--CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCC----Cc
Confidence 44666666666 55554432 2333211111 1235699999998 233444444444 333322 2221 11
Q ss_pred CCceE---EcC--------CCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccc---------------
Q psy4510 263 PPLFS---FSG--------HLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPL--------------- 315 (812)
Q Consensus 263 ~~~~~---~~~--------h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--------------- 315 (812)
+.+.. +.. +...|.+|++.|.. +..|..+...+.|...+ ..+..|.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g 172 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDG 172 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC---
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccC
Confidence 11110 111 12357889998743 35666665556554432 2233343321100
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee-cCCcC--------CCCeEEEEEcCCC-CEEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT-LPNAH--------TSDVNVISWNRTE-PLIVSGG 385 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~--------~~~v~~l~~~~~~-~~l~sg~ 385 (812)
......+.+|.+.|.....+..+..++.|...+- .+.+-..+.. ....+ ...+.+|.++|.. ..|+.+.
T Consensus 173 ~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 173 TPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp -CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 0123468899999843222444443444433321 1111111110 00000 1358999999863 4666666
Q ss_pred CCCcEEEEecCCCCCCCceEEccc--CC---CCEEEEEEccCCCcEEEEEE
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKH--HT---APVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~--h~---~~v~~v~~~p~~~~~l~s~~ 431 (812)
..+ |...+- .+.....+.. .. ..+..+.++|..+..|..+.
T Consensus 252 ~~g-l~~s~D----~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 252 HCG-IYRMDR----REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp TTE-EEEEET----TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCe-EEEeCC----CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 555 443332 1222222221 11 34677888875444455543
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.87 E-value=43 Score=32.91 Aligned_cols=179 Identities=12% Similarity=0.131 Sum_probs=82.4
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeC----C-------CcEEEEeCCCCCcceecc
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDC----K-------RNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~----d-------g~i~vwd~~~~~~~~~~~ 312 (812)
..+.+||..++. .. ...+.... ..-.+++. .++ .+++.|+. + ..+.+||+.+.. |...
T Consensus 13 ~~~~~yd~~~~~-----W~-~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~- 82 (315)
T 4asc_A 13 EGAVAYDPAANE-----CY-CASLSSQVPKNHVSLVT-KEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGM- 82 (315)
T ss_dssp TEEEEEETTTTE-----EE-EEECCCCSCSSEEEEEC-TTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEEC-
T ss_pred CceEEECCCCCe-----Ee-cCCCCCCCCccceEEEE-ECC-EEEEEcCcccCCCCCccccccceEEecCCCCe-EEEC-
Confidence 567788877641 11 11221111 12223333 344 67777773 1 127788887653 4322
Q ss_pred ccccCCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.. -..+..++.. ...-.++. -++.+++.|
T Consensus 83 ~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~--~~~~iyv~G 155 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LN-SIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYV-VYGHTVLS--HMDLVYVIG 155 (315)
T ss_dssp CCBSSCEESCEEEEE--TT-EEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEE--ETTEEEEEC
T ss_pred CCCCcchhceeEEEE--CC-EEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCc-ccceeEEE--ECCEEEEEe
Confidence 122111111112222 33 467777642 458889987532 1222222111 11122222 345677777
Q ss_pred eC-C-----CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 385 GD-D-----GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 385 ~~-d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
+. + ..+.+||+.+.. ...+..+......-..+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVH--D-GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--T-TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCCCCCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEE--C-CEEEEEeccCCCCccceEEEEECCCC
Confidence 76 2 468899986421 1111111111111122222 3 36777787654 4777887765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 812 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 8e-21 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-14 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 9e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-06 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 0.001 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-20 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-19 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-14 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 5e-12 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-13 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 8e-09 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-04 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 3e-12 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-05 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-11 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 4e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-11 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-08 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-07 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 5e-11 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-10 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 9e-11 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.003 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.004 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 7e-10 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.002 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-09 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-08 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-09 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.001 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-08 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-07 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 2e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 9e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-05 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-04 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 5e-04 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 9e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 2e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.003 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 6e-04 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 92.5 bits (228), Expect = 8e-21
Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 11/163 (6%)
Query: 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337
+ + + +G C + +W RE Q GH + + + + P A+
Sbjct: 189 SLSLAPDTRLFVSGACDASAKLWDVREGMCRQT----FTGHESDINAICFFPNGNA-FAT 243
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
S D + R++D R + + +S++++ L+++G DD +VWD
Sbjct: 244 GSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL- 300
Query: 398 FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
K H V+ + + A+G D + +W+
Sbjct: 301 --KADRAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 71.3 bits (173), Expect = 7e-14
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 8/131 (6%)
Query: 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323
+F+GH ++ A+ + ATG ++ R +
Sbjct: 218 CRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMTYSHD--NIICGIT 274
Query: 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383
+ +S R+L + D + +WD L H + V+ + + +
Sbjct: 275 SVSFSKSG-RLLLAGYDDFNCNVWDAL---KADRAGVLA-GHDNRVSCLGVTDDGMAVAT 329
Query: 384 GGDDGCIHVWD 394
G D + +W+
Sbjct: 330 GSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.4 bits (124), Expect = 9e-08
Identities = 37/224 (16%), Positives = 67/224 (29%), Gaps = 18/224 (8%)
Query: 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 275
++ L GH + W L + +L + + + +
Sbjct: 48 RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN-------KVHAIPLRSSWV 100
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
++ + V G G +V ++ +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVT- 159
Query: 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
S D + +WD + HT DV +S L VSG D +WD+
Sbjct: 160 --SSGDTTCALWDIETGQQTTTF----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALW 439
R +G TF H + + + + P + FA+G D L+
Sbjct: 214 R---EGMCRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLF 253
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.7 bits (109), Expect = 6e-06
Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 16/126 (12%)
Query: 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGV---- 703
+F+GH ++ A+ + D + + G+
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 704 -------LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756
L G N ++W +A V L GH N V L + + +A+ S
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGV----LAGHDNRVSCLGVTD-DGMAVATGSW 332
Query: 757 DRSNRI 762
D +I
Sbjct: 333 DSFLKI 338
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 58/181 (32%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
+F+GH ++ A+ + ATG ++ R
Sbjct: 218 CRQTFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQELMTY------------ 264
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
++ + +V FS SG L
Sbjct: 265 --SHDNIICGITSVS-----------------------FSKSGRL--------------- 284
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
L G N ++W +A V L GH N V L + + +A+ S D ++IW
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGV----LAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339
Query: 348 D 348
+
Sbjct: 340 N 340
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 91.7 bits (226), Expect = 1e-20
Identities = 54/328 (16%), Positives = 111/328 (33%), Gaps = 65/328 (19%)
Query: 164 IPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH 222
IP PP ++ SGH + + + V+ + I +W ++ L GH
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYET----GDFERTLKGH 58
Query: 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP------------------- 263
T+S +D+ + L + + + + +
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 264 ----------------PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT------ 301
+ +F+GH + + ++A+ + + +W
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC 177
Query: 302 ---------PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
E +W + + + + S L S S D +I++WD
Sbjct: 178 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS-- 235
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412
T C++TL H + V + ++ I+S DD + VWD + + T H
Sbjct: 236 -TGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK---NKRCMKTLNAHEH 290
Query: 413 PVTTVEWHPTESSTFASGGADDQIALWD 440
VT++++H T + +G D + +W+
Sbjct: 291 FVTSLDFHKT-APYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.6 bits (140), Expect = 1e-09
Identities = 42/335 (12%), Positives = 94/335 (28%), Gaps = 45/335 (13%)
Query: 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
+ H S V + ++ ++VS +D I VWD G T K HT V + + +
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE---TGDFERTLKGHTDSVQDISFDHS 70
Query: 423 ESSTFASGGADDQIALWDLAVERDSEI---EQREAELKDLPSQLLFIHLGQKEIKELHWH 479
+ E + + + + +P+ + + + ++
Sbjct: 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 539
T + + + L+ + ++ + +
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 540 IFRTISMSNLTSTEEDNERELEDDESEG----SGDEDRR------KDPVMNSYFIRHRGC 589
S+ +S E E + G SG D+ + + H
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 590 INRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL 649
+ V G L+ + + +WD K +
Sbjct: 250 VRGVLFHSGGKFILSC--ADDKTLRVWDYKNK-------------------------RCM 282
Query: 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
+ + H ++D+ T P + TG + + +W
Sbjct: 283 KTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.3 bits (121), Expect = 2e-07
Identities = 39/367 (10%), Positives = 93/367 (25%), Gaps = 61/367 (16%)
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV-ERDSEIEQREAELKD 458
+ H +PVT V +HP S S D I +WD + + ++ ++D
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEI 517
+ L G G + ++S +P+ + + +
Sbjct: 65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124
Query: 518 KELHWHPQLPGTIISTANSGFNIFRTISMSN--LTSTEEDNERELEDDESEGSGDEDRRK 575
++ T + + + + S D + +
Sbjct: 125 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---------- 174
Query: 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN 635
+ HR + + S + L + + +
Sbjct: 175 -KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD 233
Query: 636 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY 695
G L + GH + + S + + + + +W +
Sbjct: 234 VSTGM-------CLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYK-------- 277
Query: 696 LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755
C + ++ H + V L + + + S
Sbjct: 278 ----------NKRCMKTLN------------------AHEHFVTSLDFHKTAPY-VVTGS 308
Query: 756 VDRSNRI 762
VD++ ++
Sbjct: 309 VDQTVKV 315
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 88.7 bits (218), Expect = 2e-19
Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 20/180 (11%)
Query: 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV---DQKPLVGHTNSVEDLQWSPGEKRV 334
+ S + +A G R + +W + + + GH +SV + ++ +
Sbjct: 210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS- 268
Query: 335 LASCSVDLSIRIWDTRVINTKSCM--------LTLPNAHTSDVNVISWNRTEPLIVSGGD 386
+ S S+D S+++W+ + N KS H V ++ + + I+SG
Sbjct: 269 VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 328
Query: 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES-----STFASGGADDQIALWDL 441
D + WD + G+ + + H V +V S + FA+G D + +W
Sbjct: 329 DRGVLFWDKK---SGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.9 bits (177), Expect = 3e-14
Identities = 47/336 (13%), Positives = 91/336 (27%), Gaps = 61/336 (18%)
Query: 167 PPLFSFSGHLTEG--FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN 224
P + H F +D S ++ P V+ HT+
Sbjct: 4 VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTS 63
Query: 225 SAEDLQWS----------DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274
+++S + T + V D +A + S
Sbjct: 64 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 123
Query: 275 GFAMDWSSTEPGVLATGDCKRNIH------------------------------------ 298
++ +S + + +
Sbjct: 124 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 183
Query: 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR---VINTK 355
T R + + V + SPG+ + +A+ S+D ++R+WD+ ++
Sbjct: 184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 243
Query: 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK---------GSSVAT 406
H V + + R +VSG D + +W+L+ G+ T
Sbjct: 244 DSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVT 303
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ H V +V SG D + WD
Sbjct: 304 YIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKK 338
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.4 bits (160), Expect = 5e-12
Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 20/162 (12%)
Query: 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-- 307
+ + G S +GH +++ ++ + +G R++ +W + A
Sbjct: 232 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKS 290
Query: 308 ------WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL 361
+ +GH + V + + ++ + S S D + WD + + + +L L
Sbjct: 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKK---SGNPLLML 346
Query: 362 PNAHTSDV------NVISWNRTEPLIVSGGDDGCIHVWDLRR 397
H + V N S + +G D +W ++
Sbjct: 347 Q-GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 71.0 bits (172), Expect = 1e-13
Identities = 44/353 (12%), Positives = 103/353 (29%), Gaps = 20/353 (5%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+A +HI+ QV L H V + W+P R + +C D + +W
Sbjct: 22 IAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYVW 78
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
+ K + + + W E G I + +
Sbjct: 79 TLKGRTWKPTL--VILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI 136
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467
K S A+G D + ++ ++ E +P L
Sbjct: 137 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 196
Query: 468 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLP 527
G+ ++ + + +D + + + + + +
Sbjct: 197 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITE-- 254
Query: 528 GTIISTANSGFNIFRTISMSN--------LTSTEEDNERELEDDESEGSGDEDRRKD--- 576
++++ + F + T + L ++ ++R L E + D+ +
Sbjct: 255 SSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 314
Query: 577 PVMNSYFIRHRGCINRVRTCQYGSTTLAGVW--GEVGKVGIWDLKTALQTVDD 627
H+ ++++ G + G G + IWD+++ + D
Sbjct: 315 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKD 367
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.9 bits (156), Expect = 1e-11
Identities = 49/397 (12%), Positives = 98/397 (24%), Gaps = 54/397 (13%)
Query: 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
++ +WN+ I ++ +H+++ K V K H VT V+W P S+
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSG-NKWVQVHELKEHNGQVTGVDWAPD-SNRIV 67
Query: 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 488
+ G D +W L I + + + W P +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTL--------------VILRINRAARCVRWAPNEKKFAVG 113
Query: 489 TANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN 548
+ + +I H + T++S ++ +
Sbjct: 114 SGSRVISICY-----------FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 162
Query: 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG 608
+ ++ + + + G ++ V GS
Sbjct: 163 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA--WVS 220
Query: 609 EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE 668
V + D + + +GH + S
Sbjct: 221 HDSTVCLADADKKMAVATLASETLPLLAVTFITES-----SLVAAGHDCFPVLFTYDS-- 273
Query: 669 PGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQ 728
A G + P+++ + D K + AG
Sbjct: 274 ----AAGKLSFGGRLDVPKQSSQRGL----TARERFQNLDKKASSEGSAAAGAGLDS--- 322
Query: 729 KPLVGHTNSVEDLQWSPGEK---RVLASCSVDRSNRI 762
H NSV + G K + +D I
Sbjct: 323 ----LHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSI 355
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 56.0 bits (133), Expect = 8e-09
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377
+ W+ ++ +A C + + I++ N + L H V + W
Sbjct: 6 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSG-NKWVQVHEL-KEHNGQVTGVDWAPD 62
Query: 378 EPLIVSGGDDGCIHVWD 394
IV+ G D +VW
Sbjct: 63 SNRIVTCGTDRNAYVWT 79
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 41/263 (15%), Positives = 73/263 (27%), Gaps = 28/263 (10%)
Query: 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251
+A +HI+ QV L H + W+ + T
Sbjct: 22 IAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79
Query: 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 311
K T + + A G R I I + W V
Sbjct: 80 LKG------RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 133
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP--------- 362
+ ++V L W P + A+ S D RI+ + + P
Sbjct: 134 KHIKKPIRSTVLSLDWHPNSVLL-AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 192
Query: 363 -----NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
++ V+ + ++ + D + + D + VAT T P+ V
Sbjct: 193 LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA---VATLASETLPLLAV 249
Query: 418 EWHPTESSTFASGGADDQIALWD 440
+ S+ + G D L+
Sbjct: 250 TFITE--SSLVAAGHDCFPVLFT 270
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.2 bits (97), Expect = 2e-04
Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 25/167 (14%)
Query: 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355
+ + ++ L T + + + E ++A+ D ++ ++
Sbjct: 224 TVCLADAD----KKMAVATLASETLPLLAVTFIT-ESSLVAAGH-DCFPVLFT---YDSA 274
Query: 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415
+ L+ S D G+ + + H V+
Sbjct: 275 AGKLSFG-GRLDVPKQSSQRGLTARERFQNLDKKASSEG--SAAAGAGLDSL--HKNSVS 329
Query: 416 TVEWHP---TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459
+ + S F + G D +++WD + E+ LKDL
Sbjct: 330 QISVLSGGKAKCSQFCTTGMDGGMSIWD--------VRSLESALKDL 368
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.0 bits (94), Expect = 4e-04
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 704 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIG 763
+A +HI+ QV L H V + W+P R + +C DR+ +
Sbjct: 22 IAICPNNHEVHIYEKSGNKWVQV--HELKEHNGQVTGVDWAPDSNR-IVTCGTDRNAYVW 78
Query: 764 ARRDMLYCFFVSLVHCIFVWLKYQLFVDVYYW 795
+ + + ++ + + +
Sbjct: 79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKF 110
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.1 bits (159), Expect = 3e-12
Identities = 35/284 (12%), Positives = 77/284 (27%), Gaps = 18/284 (6%)
Query: 166 TPPLFSFSGHLTEG-FAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQV----DQKPL 219
PP+ F+GH + + +S + L +GD + +W +
Sbjct: 52 VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF 111
Query: 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 279
D+ W + E G + ++
Sbjct: 112 QVLAGPISDISWD------FEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINAC 165
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
+ + ++ + + + V D+++SP + +
Sbjct: 166 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG 225
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
D I +D + + + +SW ++ + G D I VWD+
Sbjct: 226 SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQ-KFATVGADATIRVWDVT--- 281
Query: 400 KGSSVATFKHHTAPV--TTVEWHPTESSTFASGGADDQIALWDL 441
V + + V T + S D + ++L
Sbjct: 282 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.5 bits (121), Expect = 2e-07
Identities = 38/332 (11%), Positives = 96/332 (28%), Gaps = 16/332 (4%)
Query: 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAP 413
K + P+ + +S++ T I G + D K V H ++
Sbjct: 6 KEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSV 65
Query: 414 VTTVEWHPTESSTF-ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKE 472
VTTV++ P + S + SG ++ +W +++S + + + +
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF--------QVLAGP 117
Query: 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532
I ++ W + + D + L + + I H P ++
Sbjct: 118 ISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMT 177
Query: 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINR 592
+ G +F ++++ + ++ + + S
Sbjct: 178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKS 237
Query: 593 VRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 652
+Y V G + + D + D + + K ++
Sbjct: 238 GEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD-ATIRVWDVTTSK-----CVQKWTL 291
Query: 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 684
+ +T G + + ++ +
Sbjct: 292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.9 bits (104), Expect = 2e-05
Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 8/129 (6%)
Query: 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--N 375
N L + P + C +R D + ++ +S V + +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGD-SKVPPVVQFTGHGSSVVTTVKFSPI 74
Query: 376 RTEPLIVSGGDDGCIHVWDLR-----RFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430
+ + SG + G + VW + + + F+ P++ + W G
Sbjct: 75 KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134
Query: 431 GADDQIALW 439
D ++
Sbjct: 135 EGRDNFGVF 143
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.7 bits (153), Expect = 2e-11
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 18/132 (13%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH + LQ+ R++ S S D +IR+WD + + V
Sbjct: 174 LNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVL------EGHEELVRCI 224
Query: 375 NRTEPLIVSGGDDGCIHVWDL------RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428
IVSG DG I VWDL R + T H+ V +++
Sbjct: 225 RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIV 281
Query: 429 SGGADDQIALWD 440
S DD I +WD
Sbjct: 282 SSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (127), Expect = 3e-08
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 16/125 (12%)
Query: 276 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335
+ ++ +G I +W L E ++ + + +
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIE-------CGACLRVLEGHEELVRCIRFDNKRI 231
Query: 336 ASCSVDLSIRIWDT------RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389
S + D I++WD R C+ TL H+ V + ++ E IVS D
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-VEHSGRVFRLQFD--EFQIVSSSHDDT 288
Query: 390 IHVWD 394
I +WD
Sbjct: 289 ILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (118), Expect = 4e-07
Identities = 51/291 (17%), Positives = 91/291 (31%), Gaps = 35/291 (12%)
Query: 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAED 228
+ S + + + + +G I IW ++ L GHT S
Sbjct: 8 IHCRSETSKGVYCLQYDDQ---KIVSGLRDNTIKIWDKNTLECKRI----LTGHTGSVLC 60
Query: 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288
LQ+ + + D ++ + N I
Sbjct: 61 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS-------- 112
Query: 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348
R+I +W ++ LVGH +V + + + + S S D +I++W+
Sbjct: 113 ----KDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWN 164
Query: 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408
T T + TL + + + L+VSG D I +WD+ +
Sbjct: 165 TS---TCEFVRTL---NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA------CLR 212
Query: 409 HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459
V ++ SG D +I +WDL D L+ L
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL 263
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 4e-04
Identities = 19/116 (16%), Positives = 33/116 (28%), Gaps = 16/116 (13%)
Query: 660 FAMDWSSTEPGVLATGDCKRNIHIWTPR--------EAGAWSVYLYTNRFGVLATGDCKR 711
+ ++ +G I +W E V + +G
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDG 238
Query: 712 NIHIWTPREAGAWQVDQ-----KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
I +W A + + LV H+ V LQ+ + S S D + I
Sbjct: 239 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTILI 291
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 63.3 bits (152), Expect = 3e-11
Identities = 10/82 (12%), Positives = 26/82 (31%)
Query: 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417
++ + A ++ I ++ L++ DG + V+ K + + P+
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 418 EWHPTESSTFASGGADDQIALW 439
+ G +I
Sbjct: 63 NFIDNTDLQIYVGTVQGEILKV 84
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 3e-08
Identities = 30/293 (10%), Positives = 68/293 (23%), Gaps = 22/293 (7%)
Query: 163 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH 222
L + ++ + G + I + ++Q
Sbjct: 43 QAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANL 102
Query: 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS 282
+ + G + + + + T+ ++
Sbjct: 103 GICRICKYGD------DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM 156
Query: 283 TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342
+ W G + D+ P E+ A S+D
Sbjct: 157 DTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216
Query: 343 SIRIWD-----------TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391
+ + R + VN I ++ + + G DG I
Sbjct: 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276
Query: 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444
W+L+ KK + F + V+ + + +DD +
Sbjct: 277 CWNLQTRKK---IKNFAKFN-EDSVVKIACS-DNILCLATSDDTFKTNAAIDQ 324
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.2 bits (123), Expect = 1e-07
Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376
+ + D++ P + L S D S+ ++ + K+ L + + ++
Sbjct: 9 APKDYISDIKIIPSKSL-LLITSWDGSLTVYKFDI-QAKNVDLLQSLRYKHPLLCCNFID 66
Query: 377 TEPLIVSGGDDGCIHVW 393
L + G +
Sbjct: 67 NTDLQIYVGTVQGEILK 83
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 5e-11
Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 11/134 (8%)
Query: 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS 367
+ Q T+ + L + P + + + V++ + H S
Sbjct: 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGM------ESSNVEVLHVNKPDKYQLHLHES 266
Query: 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
V + + VS G D ++ W G+S+ K + V + +
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRT---PYGASIFQSKES-SSVLSCDISVD-DKYI 321
Query: 428 ASGGADDQIALWDL 441
+G D + ++++
Sbjct: 322 VTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.7 bits (148), Expect = 1e-10
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 6/103 (5%)
Query: 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
+ + D+ L H + V L+++ K S D + W T
Sbjct: 239 LAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTP-- 295
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+ + +S V + + IV+G D V+++
Sbjct: 296 -YGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 3/106 (2%)
Query: 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWN 375
H V + S + + + +++WD KS + L + +
Sbjct: 49 NHGEVVCAVTISNPTRH-VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
++ GG+ + +WDL A
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 365 HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR--RFKKGSSVATFKHHTAPVTTVEWHPT 422
H V ++ + + +GG GC+ VWD+ K S + + + + P
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGK-GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.5 bits (147), Expect = 9e-11
Identities = 40/299 (13%), Positives = 72/299 (24%), Gaps = 44/299 (14%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
L + SGH A+ + L +G I W+ H+N
Sbjct: 5 VLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSS---------SSMHQDHSNLIV 50
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW------- 280
L S + D K G + D
Sbjct: 51 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 281 -------------SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327
S+ + + +V +
Sbjct: 111 GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI 170
Query: 328 SPGEKRVLASCSVDLSIRIW------DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381
SP E + A + + T ++ + + ++ E L+
Sbjct: 171 SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 230
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+G D I ++ ++ + + H V + W ST S GAD I W+
Sbjct: 231 ATGSLDTNIFIYSVK--RPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.1 bits (94), Expect = 3e-04
Identities = 26/322 (8%), Positives = 67/322 (20%), Gaps = 47/322 (14%)
Query: 364 AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
H + ++ N ++SG DG I W + H+ + +++ +
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQD--------HSNLIVSLDNSKAQ 58
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
+ S ++ L + +
Sbjct: 59 EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 118
Query: 484 GTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543
+A S + + + + L + S +
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178
Query: 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTL 603
++ + + + R + + + L
Sbjct: 179 AGD---------VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229
Query: 604 AGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 663
+ I+ +K P + + + H +
Sbjct: 230 VATGSLDTNIFIYSVKR------------------------PMKIIKALNAHKDGVNNLL 265
Query: 664 WSSTEPGVLATGDCKRNIHIWT 685
W + P L + I W
Sbjct: 266 WET--PSTLVSSGADACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.0 bits (86), Expect = 0.003
Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 5/86 (5%)
Query: 677 CKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 736
+ + + ++ATG NI I++ + K L H +
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII---KALNAHKD 259
Query: 737 SVEDLQWSPGEKRVLASCSVDRSNRI 762
V +L W L S D +
Sbjct: 260 GVNNLLWETPST--LVSSGADACIKR 283
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.0 bits (86), Expect = 0.004
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ T H +T + +P SG D +I W +
Sbjct: 6 LKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSS 39
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 58.8 bits (140), Expect = 7e-10
Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 32/296 (10%)
Query: 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDL-- 229
GH A+ S+ L + D + +I+ W + ++ H +
Sbjct: 8 RYGHNKAITALSSSADGK-TLFSADAEGHINSW---DISTGISNRVFPDVHATMITGIKT 63
Query: 230 ----------------QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 273
+ + + + + H+
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333
+ ++ N + +V L G + S P E
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEIT 183
Query: 334 VLASCSVDLSIRIWDTRVI--------NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385
+A + + D N + HT+ V +SW+ + +G
Sbjct: 184 SVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGS 243
Query: 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
D + VW++ + + H + V +V W +T S G D I W++
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 54.2 bits (128), Expect = 2e-08
Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 5/110 (4%)
Query: 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371
+ GH ++ L S K L S + I WD I+T P+ H + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKT-LFSADAEGHINSWD---ISTGISNRVFPDVHATMITG 60
Query: 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421
I L DD + V SS A ++ +
Sbjct: 61 IKTTSKGDLFTVSWDD-HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA 109
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.8 bits (88), Expect = 0.002
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
GS H +T + + T S A+ I WD++
Sbjct: 2 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS 42
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.1 bits (141), Expect = 1e-09
Identities = 33/198 (16%), Positives = 58/198 (29%), Gaps = 25/198 (12%)
Query: 352 INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK--- 408
I T + AH +D+ +S VS DG + VWD + +
Sbjct: 4 IATANA----GKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF 57
Query: 409 ------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQ 462
HH + +E E A+ + + + E ++ ++
Sbjct: 58 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDET------KKVIFEKLD 111
Query: 463 LLFIHLGQKEIKELHWHPQ----LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIK 518
LL + + L W L +++T G + + L
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 519 ELHWHPQLPGTIISTANS 536
EL + P T A S
Sbjct: 172 ELQGTVESPMTPSQFATS 189
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 57.2 bits (136), Expect = 3e-09
Identities = 21/204 (10%), Positives = 59/204 (28%), Gaps = 39/204 (19%)
Query: 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIW--------TPREAGAWQVDQKPLVGHTNS 321
H + F++ + + +W P++ K + H +
Sbjct: 12 AHDADIFSVSAC---NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWD------TRVINTKSCMLTLPNAHTSDVNVISWN 375
++ ++ E ++A+ S + + T+ + + L + + W
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128
Query: 376 RTEP-----LIVSGGDDGCIHVWDLRRFKK---------------GSSVATFKHHTAPVT 415
+ +V+ G ++W F +V + + T
Sbjct: 129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 188
Query: 416 TVEWHPTESSTFASGGADDQIALW 439
+V+ A+G + + +
Sbjct: 189 SVDISE--RGLIATGFNNGTVQIS 210
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 6e-08
Identities = 43/298 (14%), Positives = 91/298 (30%), Gaps = 43/298 (14%)
Query: 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR------EAGAWQVDQKPLGGHTNSAED 228
H+ A++ + E ++AT ++ + + ++D +S
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 229 LQWS----------------DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272
L+W T + + + S
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184
Query: 273 TEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330
++D S G++ATG + I + Q ++ ++NS+ +++SP
Sbjct: 185 QFATSVDISER--GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 331 EKRVLASCS--VDLSIRIWDTRVINTKSCM---------LTLPNAHTSDVNVISWNRTEP 379
+ + I +++T + AH+S V +S+N +
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES---STFASGGADD 434
+ S G DG + WD++ + T H + E + A G D
Sbjct: 303 TLCSAGWDGKLRFWDVK---TKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 56.4 bits (134), Expect = 4e-09
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352
+ + G ++ D V H+ SV L WSP + +AS S D +I+IW+
Sbjct: 212 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-IASASADKTIKIWNVA-- 268
Query: 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
T T+P + + T+ +VS +G I+ +
Sbjct: 269 -TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 52.2 bits (123), Expect = 1e-07
Identities = 23/274 (8%), Positives = 48/274 (17%), Gaps = 13/274 (4%)
Query: 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE 227
++ H + S + + T + + G
Sbjct: 50 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDIS 109
Query: 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 287
S A+ + F + S
Sbjct: 110 WDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRII------ 163
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347
+ + +
Sbjct: 164 ----SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 219
Query: 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407
D AH+ V ++W+ I S D I +W++ K ++
Sbjct: 220 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 279
Query: 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ W S A+ I +
Sbjct: 280 TRIEDQQLGIIWTKQ---ALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.5 bits (90), Expect = 0.001
Identities = 11/80 (13%), Positives = 23/80 (28%), Gaps = 5/80 (6%)
Query: 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
+LP V+ I ++ + + + H+ T +
Sbjct: 11 SLPRTARGTAVVLGNTPAGDKIQYCNGT-SVYTVPV---GSLTDTEIYTEHSHQTTVAKT 66
Query: 420 HPTESSTFASGGADDQIALW 439
P+ ASG + +W
Sbjct: 67 SPS-GYYCASGDVHGNVRIW 85
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 5e-08
Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 16/163 (9%)
Query: 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339
+ + +G + +W P + L GHTN V LQ+ + S S
Sbjct: 142 CVQYDGRRVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYSLQFDG---IHVVSGS 194
Query: 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399
+D SIR+WD N + + ++VSG D + +WD++ +
Sbjct: 195 LDTSIRVWDVETGNCIHTL------TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248
Query: 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
++ H + VT ++++ + + D + LWDL
Sbjct: 249 CLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLK 288
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 10/76 (13%)
Query: 347 WDTRVINTKSCMLTLPNAHTSDVN-VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405
W L H V + + IVSG DD + VW G +
Sbjct: 1 WRR---GELKSPKVL-KGHDDHVITCLQFCGN--RIVSGSDDNTLKVWSA---VTGKCLR 51
Query: 406 TFKHHTAPVTTVEWHP 421
T HT V + +
Sbjct: 52 TLVGHTGGVWSSQMRD 67
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 23/126 (18%), Positives = 35/126 (27%), Gaps = 14/126 (11%)
Query: 315 LVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374
L GH + V R + S S D ++++W T C+ TL HT V
Sbjct: 12 LKGHDDHVITC-LQFCGNR-IVSGSDDNTLKVWS---AVTGKCLRTL-VGHTGGVWSSQM 65
Query: 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434
+ + +TV SG D
Sbjct: 66 --------RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 435 QIALWD 440
+ +WD
Sbjct: 118 TLRVWD 123
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 51.8 bits (122), Expect = 2e-07
Identities = 16/161 (9%), Positives = 36/161 (22%), Gaps = 15/161 (9%)
Query: 288 LATGDCKRNIHIW---TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344
L + + + S + P + DL+
Sbjct: 193 LYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVP-RSMTSEAGEYDLND 251
Query: 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL---IVSGGDDGCIHVWDLRRFKKG 401
+ IN + S + + S + G + +D++
Sbjct: 252 MYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT---- 307
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+T + + T D +I + L
Sbjct: 308 ---RKVTEVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLE 344
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.5 bits (98), Expect = 2e-04
Identities = 13/207 (6%), Positives = 34/207 (16%), Gaps = 14/207 (6%)
Query: 202 HIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261
+ + + L + ++
Sbjct: 157 VMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 216
Query: 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI--HIWTPREAGAWQVDQKPLVGHT 319
F A ++ PL
Sbjct: 217 VSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSI 276
Query: 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379
+ +D + +++ + +
Sbjct: 277 LIYSVPVHGE-FAAYYQGAPEKGVLLKYDVKTRKVT--------EVKNNLTDLRLSADRK 327
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVAT 406
++ DDG I+ + L +K T
Sbjct: 328 TVMVRKDDGKIYTFPL---EKPEDERT 351
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.4 bits (121), Expect = 2e-07
Identities = 14/95 (14%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406
+ + + H ++++ I+ I+ G + ++++LR K A
Sbjct: 262 DGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKL--VHAN 319
Query: 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
+ +V + + A+ D Q L L
Sbjct: 320 ILKDADQIWSVNFKG--KTLVAAVEKDGQSFLEIL 352
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.0 bits (120), Expect = 3e-07
Identities = 41/317 (12%), Positives = 85/317 (26%), Gaps = 23/317 (7%)
Query: 315 LVGHTNSVED-LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373
L GH SV LQ+ + + + D IR++D K +L L + H V +
Sbjct: 8 LRGHMTSVITCLQFED---NYVITGADDKMIRVYD---SINKKFLLQL-SGHDGGVWALK 60
Query: 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433
+ L+ D + H++ +G D
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCT---HVFEGHNSTVRCLDIVEYKNIKYIVTGSRD 117
Query: 434 DQIALWDLAVER---DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490
+ + +W L E D E + P + + + G I+ +
Sbjct: 118 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG 177
Query: 491 NSGFNIF-------RTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543
+ + + + L I+ + + T I +
Sbjct: 178 SYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 237
Query: 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTL 603
+ + + G + F H ++ + T L
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNIL 297
Query: 604 AGVWGEVGKVGIWDLKT 620
G + I++L++
Sbjct: 298 VS--GSENQFNIYNLRS 312
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.5 bits (116), Expect = 9e-07
Identities = 28/166 (16%), Positives = 46/166 (27%), Gaps = 10/166 (6%)
Query: 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321
P + GH + E + TG + I ++ L GH
Sbjct: 2 VPQRTTLRGH--MTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQ----LSGHDGG 55
Query: 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381
V L+++ G V S + + + T I + I
Sbjct: 56 VWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEG----HNSTVRCLDIVEYKNIKYI 111
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427
V+G D +HVW L + + T E +P
Sbjct: 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 157
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.1 bits (115), Expect = 1e-06
Identities = 33/399 (8%), Positives = 95/399 (23%), Gaps = 61/399 (15%)
Query: 365 HTSDV-NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423
H + V + + +++G DD I V+D + H V +++
Sbjct: 11 HMTSVITCLQFEDN--YVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYAH-- 63
Query: 424 SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483
SG D + +W D+
Sbjct: 64 GGILVSGSTDRTVRVW------------------DIKKGCCTHVFEGHNSTVRCLDIVEY 105
Query: 484 GTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543
I + + LP + G++ L +H
Sbjct: 106 KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP------------------ 147
Query: 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTL 603
+ + G+ D + + + C+ L
Sbjct: 148 EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLY----------IL 197
Query: 604 AGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 663
+G + + + + + + G+ +
Sbjct: 198 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLV 257
Query: 664 WSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGA 723
++ + + + + Y + +++ + +I+ R
Sbjct: 258 SAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSE--NQFNIYNLRS--- 312
Query: 724 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762
++ ++ + + + + K ++A+ D + +
Sbjct: 313 GKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQSFL 349
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.4 bits (113), Expect = 2e-06
Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 5/98 (5%)
Query: 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357
+ H ++ + +L S S + I++ R +
Sbjct: 260 AADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR---SGKL 315
Query: 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395
+ + +++ L+ + DG + L
Sbjct: 316 VHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 49.0 bits (115), Expect = 1e-06
Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 15/161 (9%)
Query: 288 LATGDCKRNIHIWTPREAGAWQVDQKPLV-----GHTNSVEDLQ-WSPGEKRVLASCSVD 341
+ TG + + G D H S+ +K+ A+ +
Sbjct: 170 VKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 229
Query: 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401
D + T T + +P + G + + +DL++ K
Sbjct: 230 YGYLSVDLK---TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLI 285
Query: 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442
+ + V + + GG + +A+++
Sbjct: 286 KAA----NLDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPD 321
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 45.1 bits (105), Expect = 2e-05
Identities = 9/156 (5%), Positives = 34/156 (21%), Gaps = 5/156 (3%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
+ + N+H+ + + V + ++ +P + + I
Sbjct: 10 YMIVTNYPNNLHVV---DVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 347 WDTRVINTKSC--MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
D + ++P + + + + + + V
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 126
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ + D + +
Sbjct: 127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG 162
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 41.6 bits (96), Expect = 2e-04
Identities = 23/243 (9%), Positives = 47/243 (19%), Gaps = 15/243 (6%)
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIAL 438
++ +HV D+ + + T P + + I
Sbjct: 10 YMIVTNYPNNLHVVDV---ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498
DL + + + + P + +
Sbjct: 67 IDLD----------TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
Query: 499 TISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNE- 557
+ P +F E K + P + A +++ +
Sbjct: 117 YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYT 176
Query: 558 RELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWD 617
L G RH + + D
Sbjct: 177 VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 236
Query: 618 LKT 620
LKT
Sbjct: 237 LKT 239
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 40.5 bits (93), Expect = 5e-04
Identities = 16/140 (11%), Positives = 41/140 (29%), Gaps = 13/140 (9%)
Query: 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337
+ + AT D + + + T SP +
Sbjct: 213 IARFKDDKQDPATADLLYGYLSV---DLKTGKTHTQEFADLTELYFTGLRSPKDPNQ-IY 268
Query: 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397
++ + +D + + + HT +++++ + GG + V++
Sbjct: 269 GVLN-RLAKYDLK---QRKLIKAANLDHT--YYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322
Query: 398 FKKGSSVATFKHHTAPVTTV 417
+K V K ++T
Sbjct: 323 LEK---VKNIKLPGGDMSTT 339
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 42.9 bits (99), Expect = 9e-05
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 7/156 (4%)
Query: 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346
V + IH+W GA + Q +V V+ + SP ++ + + +
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQ--VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 347 WDTRVINTKSCMLTLPNAHTSDVNV--ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404
+ I LT ++ IS + + G + V
Sbjct: 64 YR---IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 120
Query: 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440
+ P + + D+I L+
Sbjct: 121 VDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFT 156
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 42.1 bits (97), Expect = 2e-04
Identities = 12/102 (11%), Positives = 33/102 (32%), Gaps = 1/102 (0%)
Query: 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437
+ + ++ + IHVW+L + + P + + + ++
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQV-QPMVVSPDKRYLYVGVRPEFRVL 62
Query: 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479
+ +A + + E+ L + + H GQ +
Sbjct: 63 AYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA 104
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 22/274 (8%), Positives = 59/274 (21%), Gaps = 13/274 (4%)
Query: 150 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 209
+ + R P + G + + V + P
Sbjct: 93 DIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVD-LEGKAFKRMLDVPDCY 151
Query: 210 GAWQVDQKPLGGHTNSAEDLQW-SDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268
+ H + + + E +
Sbjct: 152 HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW 211
Query: 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328
+ + +D SS + L + W+ V + +++ +
Sbjct: 212 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD-----GWRPGGWQQVAYHRALDRIYLL 266
Query: 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG 388
++ + + + D + T + H D +S + L D
Sbjct: 267 VDQRDEWRHKTASRFVVVLDAK---TGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323
Query: 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422
+++ D G + + +
Sbjct: 324 TLYIHDAE---SGEELRSVNQLGHGPQVITTADM 354
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 41.7 bits (96), Expect = 3e-04
Identities = 33/253 (13%), Positives = 57/253 (22%), Gaps = 8/253 (3%)
Query: 192 LATGDCKRNIHIWT-PREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250
T +I + PR L + Q+S +
Sbjct: 85 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRM 144
Query: 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV 310
PT P F A TE T + A+
Sbjct: 145 LDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 204
Query: 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370
LV T + + Q +V+ + +
Sbjct: 205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 264
Query: 371 VISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST-FAS 429
++ R E + V D K G +A F+ + ++ E +A
Sbjct: 265 LLVDQRDE--WRHKTASRFVVVLDA---KTGERLAKFEMG-HEIDSINVSQDEKPLLYAL 318
Query: 430 GGADDQIALWDLA 442
D + + D
Sbjct: 319 STGDKTLYIHDAE 331
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.1 bits (97), Expect = 2e-04
Identities = 29/263 (11%), Positives = 60/263 (22%), Gaps = 18/263 (6%)
Query: 184 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243
L D A D K L + + Q
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV---QPTRV 117
Query: 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303
AE +R + +++ ++ + + G + I +
Sbjct: 118 ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP-EAGTLVEDKPIQSWE 176
Query: 304 EAGAWQVDQKPLV----GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML 359
Q D + + + + + D T +
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE---TGEMAM 233
Query: 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419
+ N + + +DL +K +S+ + +V
Sbjct: 234 REVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDL---EKNASIKRVPLPHSY-YSVNV 287
Query: 420 HPTESSTFASGGADDQIALWDLA 442
+ ST GGA +A +D
Sbjct: 288 ST-DGSTVWLGGALGDLAAYDAE 309
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.6 bits (93), Expect = 6e-04
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 5/65 (7%)
Query: 380 LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADDQIA 437
I++ + V D +K + A P +A+ + +
Sbjct: 3 YILAPARPDKLVVIDT---EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLV 59
Query: 438 LWDLA 442
DL
Sbjct: 60 KIDLV 64
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.2 bits (87), Expect = 0.003
Identities = 14/156 (8%), Positives = 39/156 (25%), Gaps = 11/156 (7%)
Query: 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324
L ++ H + G T + D + ++ + +
Sbjct: 186 LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFS 245
Query: 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384
+P + R + +D + + +P ++ + + G
Sbjct: 246 TAVNPAKTRA---FGAYNVLESFDLE---KNASIKRVP--LPHSYYSVNVSTDGSTVWLG 297
Query: 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420
G G + +D +K ++
Sbjct: 298 GALGDLAAYDAETLEK---KGQVDLPGNASMSLASV 330
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 40.2 bits (92), Expect = 6e-04
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441
++ + I V D+ AT + P P + + + + +++ D
Sbjct: 6 IANSESDNISVIDV---TSNKVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDT 61
Query: 442 A 442
A
Sbjct: 62 A 62
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 812 | |||
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.96 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.95 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.92 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.86 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.83 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.81 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.8 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.8 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.76 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.76 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.72 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.64 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.62 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.59 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.46 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.35 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.3 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.27 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.25 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.13 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.07 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.02 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.01 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.01 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.96 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.94 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.83 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.77 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.71 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.68 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.66 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.64 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.58 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.53 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.42 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.39 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.05 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.58 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.52 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.28 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.92 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.85 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.84 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.67 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.51 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.44 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.35 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.12 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.07 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 95.66 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 94.78 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 94.34 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 94.2 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 93.31 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 93.29 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 93.1 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 92.9 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 92.89 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 91.72 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 90.54 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 89.46 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 87.09 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 84.98 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 82.09 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.9e-37 Score=317.95 Aligned_cols=310 Identities=22% Similarity=0.394 Sum_probs=244.7
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
...++++||.+.|++|+|+|++ .+|+||+.||+|+|||+.++. ....+.+|...|.+++|+|++. ++++++.++
T Consensus 8 ~~~~~L~GH~~~I~~l~~sp~~-~~l~s~s~Dg~i~iWd~~~~~----~~~~~~~h~~~V~~~~~~~~~~-~~~~~~~~~ 81 (317)
T d1vyhc1 8 PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGD----FERTLKGHTDSVQDISFDHSGK-LLASCSADM 81 (317)
T ss_dssp SCSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCC----CCEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CccEEEcCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCC----EEEEEeCCCCcEEEEeeecccc-ccccccccc
Confidence 4567899999999999999998 799999999999999999887 5778889999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.+.+|+.... .....+ ..|...+.++.|+++++.+++++.|+.+++||++ .+..+..+..|...+.+++|+|+
T Consensus 82 ~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 154 (317)
T d1vyhc1 82 TIKLWDFQGF---ECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ---TGYCVKTFTGHREWVRMVRPNQD 154 (317)
T ss_dssp CCCEEETTSS---CEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEECTT
T ss_pred cccccccccc---cccccc-ccccccceeeeccCCCceEEeeccCcceeEeecc---cceeeeEEccCCCcceeeecccC
Confidence 9999998743 333333 7889999999999999999999999999999998 56788899999999999999998
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+ .+|++++.|+.|++|++..... ......+...+..+.|+|+...
T Consensus 155 ~-~~l~~~~~d~~v~~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~~~~------------------ 199 (317)
T d1vyhc1 155 G-TLIASCSNDQTVRVWVVATKEC----------------KAELREHRHVVECISWAPESSY------------------ 199 (317)
T ss_dssp S-SEEEEEETTSCEEEEETTTCCE----------------EEEECCCSSCEEEEEECCSCGG------------------
T ss_pred C-CEEEEEeCCCeEEEEeecccee----------------eEEEecCCCCceEEEEeecccc------------------
Confidence 6 6999999999999999987631 1111222223444444443110
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
..+
T Consensus 200 --------------------------~~~--------------------------------------------------- 202 (317)
T d1vyhc1 200 --------------------------SSI--------------------------------------------------- 202 (317)
T ss_dssp --------------------------GGG---------------------------------------------------
T ss_pred --------------------------cee---------------------------------------------------
Confidence 000
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEE
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAM 662 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l 662 (812)
..............+..++++ +.||.|++|++.++. ++.++.+|...|.++
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~--~~d~~i~~~~~~~~~-------------------------~~~~~~~~~~~v~~~ 253 (317)
T d1vyhc1 203 --SEATGSETKKSGKPGPFLLSG--SRDKTIKMWDVSTGM-------------------------CLMTLVGHDNWVRGV 253 (317)
T ss_dssp --GGCCSCC-------CCEEEEE--ETTSEEEEEETTTTE-------------------------EEEEEECCSSCEEEE
T ss_pred --eccccceeeeeccCCceeEec--cCCCEEEEEECCCCc-------------------------EEEEEeCCCCCEEEE
Confidence 000011122334456678887 899999999999876 788899999999999
Q ss_pred EeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeE
Q psy4510 663 DWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 742 (812)
Q Consensus 663 ~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~ 742 (812)
+|+| ++++|++++.||+|+||| +.+++ ++.++.+|.+.|++|+
T Consensus 254 ~~~~-~~~~l~s~~~dg~i~iwd--------------------------------~~~~~----~~~~~~~h~~~V~~~~ 296 (317)
T d1vyhc1 254 LFHS-GGKFILSCADDKTLRVWD--------------------------------YKNKR----CMKTLNAHEHFVTSLD 296 (317)
T ss_dssp EECS-SSSCEEEEETTTEEEEEC--------------------------------CTTSC----CCEEEECCSSCEEEEE
T ss_pred EECC-CCCEEEEEECCCeEEEEE--------------------------------CCCCc----EEEEEcCCCCCEEEEE
Confidence 9999 666666666665555555 44555 4667889999999999
Q ss_pred EecCCceeEEeeccCCceEEee
Q psy4510 743 WSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 743 fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
|+|+++ +|+|||.||+|+|||
T Consensus 297 ~s~~~~-~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 297 FHKTAP-YVVTGSVDQTVKVWE 317 (317)
T ss_dssp ECSSSS-CEEEEETTSEEEEEC
T ss_pred EcCCCC-EEEEEeCCCeEEEeC
Confidence 999999 899999999999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.6e-36 Score=311.72 Aligned_cols=309 Identities=17% Similarity=0.286 Sum_probs=246.9
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....|.||.++|++|+|+|++++|++|+.|++|+|||+.++ +++.++.+|...|.+++|+|++ .+++++..+
T Consensus 9 ~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~-------~~~~~~~~h~~~V~~~~~~~~~-~~~~~~~~~ 80 (317)
T d1vyhc1 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHSG-KLLASCSAD 80 (317)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred ccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------CEEEEEeCCCCcEEEEeeeccc-ccccccccc
Confidence 34678999999999999999999999999999999999885 7889999999999999999998 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.+.+|+..... ....+.+|...+.++.|+|++. .+++++.|+.+++||+++ ...+..+ ..|...+.+++|
T Consensus 81 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~ 151 (317)
T d1vyhc1 81 MTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT---GYCVKTF-TGHREWVRMVRP 151 (317)
T ss_dssp SCCCEEETTSSC----EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEE
T ss_pred cccccccccccc----cccccccccccceeeeccCCCc-eEEeeccCcceeEeeccc---ceeeeEE-ccCCCcceeeec
Confidence 999999998876 5666788999999999999998 599999999999999984 3445555 688999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
++++++|++|+.||.|++|+++ ....+..+..|...+.++.|+|+... +......+.....
T Consensus 152 ~~~~~~l~~~~~d~~v~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~--------------- 212 (317)
T d1vyhc1 152 NQDGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSY-SSISEATGSETKK--------------- 212 (317)
T ss_dssp CTTSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGG-GGGGGCCSCC------------------
T ss_pred ccCCCEEEEEeCCCeEEEEeec---cceeeEEEecCCCCceEEEEeecccc-ceeeccccceeee---------------
Confidence 9999999999999999999998 56788889999999999999987431 1111100100000
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
....+ ..+++++.++....+....
T Consensus 213 -----------------------~~~~~-~~~~~~~~d~~i~~~~~~~-------------------------------- 236 (317)
T d1vyhc1 213 -----------------------SGKPG-PFLLSGSRDKTIKMWDVST-------------------------------- 236 (317)
T ss_dssp ---------------------------C-CEEEEEETTSEEEEEETTT--------------------------------
T ss_pred -----------------------eccCC-ceeEeccCCCEEEEEECCC--------------------------------
Confidence 00000 2233333333211111110
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
......+.+|...|.+++++|++++|+++ +.||.|+
T Consensus 237 ------------------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~dg~i~ 272 (317)
T d1vyhc1 237 ------------------------------------------GMCLMTLVGHDNWVRGVLFHSGGKFILSC--ADDKTLR 272 (317)
T ss_dssp ------------------------------------------TEEEEEEECCSSCEEEEEECSSSSCEEEE--ETTTEEE
T ss_pred ------------------------------------------CcEEEEEeCCCCCEEEEEECCCCCEEEEE--ECCCeEE
Confidence 00122345667789999999999999998 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+||+.+++ ++.++.+|.+.|++++|+| ++++|+||+.||+|+|||
T Consensus 273 iwd~~~~~-------------------------~~~~~~~h~~~V~~~~~s~-~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 273 VWDYKNKR-------------------------CMKTLNAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EECCTTSC-------------------------CCEEEECCSSCEEEEEECS-SSSCEEEEETTSEEEEEC
T ss_pred EEECCCCc-------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEeC
Confidence 99998876 7888999999999999999 788999999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-36 Score=316.96 Aligned_cols=292 Identities=14% Similarity=0.165 Sum_probs=245.0
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccc-cccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-DQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~-~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
.+.+..+ +|.+.|+|++|+| +|++||||+ ||.|+|||+.+...... ......+|...|++++|+|++++|++++.|
T Consensus 42 ~~~~~~~-~H~~~V~~v~fs~-~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~d 118 (337)
T d1gxra_ 42 ARQINTL-NHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp EEEEEEE-CCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred ceEEEEC-CCCCcEEEEEECC-CCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeecc
Confidence 3556677 8999999999999 999999998 79999999987654322 233456899999999999999999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.|++||+... ..+....+.+|...+.+++|+|++ .++++++.++.|++|++.++. ......+|...|.+
T Consensus 119 g~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~~~~~----~~~~~~~~~~~v~~ 188 (337)
T d1gxra_ 119 STLSIWDLAAP-----TPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQT----LVRQFQGHTDGASC 188 (337)
T ss_dssp SEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEE
T ss_pred ccccccccccc-----cccccccccccccccccccccccc-ccccccccccccccccccccc----cccccccccccccc
Confidence 99999998764 234566788999999999999998 899999999999999999876 45667789999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
++|++++. .+++|+.|+.|++||+++. ..+..+ .|...|.+++|+|++++|++|+.||.|++||++. . ..
T Consensus 189 l~~s~~~~-~~~~~~~d~~v~i~d~~~~---~~~~~~--~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~---~-~~ 258 (337)
T d1gxra_ 189 IDISNDGT-KLWTGGLDNTVRSWDLREG---RQLQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK---P-DK 258 (337)
T ss_dssp EEECTTSS-EEEEEETTSEEEEEETTTT---EEEEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---S-CE
T ss_pred cccccccc-ccccccccccccccccccc---eeeccc--ccccceEEEEEcccccccceeccccccccccccc---c-cc
Confidence 99999998 6999999999999999843 344443 5788999999999999999999999999999974 2 34
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
.....|...|++++|+|++ .+|++++.||.|++||+... ..+....+...|.+++|+|++..
T Consensus 259 ~~~~~~~~~i~~v~~s~~g-~~l~s~s~Dg~i~iwd~~~~-----------------~~~~~~~~~~~v~~~~~s~d~~~ 320 (337)
T d1gxra_ 259 YQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYG-----------------ASIFQSKESSSVLSCDISVDDKY 320 (337)
T ss_dssp EEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTC-----------------CEEEEEECSSCEEEEEECTTSCE
T ss_pred ccccccccccceEEECCCC-CEEEEEeCCCeEEEEECCCC-----------------CEEEEccCCCCEEEEEEeCCCCE
Confidence 5667899999999999997 69999999999999999887 34444556678999999999764
Q ss_pred EEEEEeCC-CeEEEEe
Q psy4510 485 TIISTANS-GFNIFRT 499 (812)
Q Consensus 485 ~~~~~~~~-~~~~~~~ 499 (812)
+++++.| .+.+|+.
T Consensus 321 -l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 321 -IVTGSGDKKATVYEV 335 (337)
T ss_dssp -EEEEETTSCEEEEEE
T ss_pred -EEEEeCCCeEEEEEE
Confidence 5555554 4677753
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-36 Score=313.05 Aligned_cols=285 Identities=16% Similarity=0.250 Sum_probs=237.3
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCc--eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL--FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
.|...|++++|+|++++|++|+ ||.|+|||+..+. ...++ ....+|.+.|.+++|+|++ .+|++|+.||+|+
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~----~~~~~~~~~~~~h~~~I~~v~~s~dg-~~l~s~~~dg~i~ 122 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG----NKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLS 122 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT----CCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCc----ccceeEEeeecCCCCcEEEEEEcCCC-CEEEEeecccccc
Confidence 7999999999999999999997 7899999998752 11222 3346799999999999999 8999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+||+..... .....+..|...+.+++|+|++. ++++++.|+.|++|++++ ..+.... ..|...|++++|++++
T Consensus 123 iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~~~~~---~~~~~~~-~~~~~~v~~l~~s~~~ 195 (337)
T d1gxra_ 123 IWDLAAPTP--RIKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHN---QTLVRQF-QGHTDGASCIDISNDG 195 (337)
T ss_dssp EEECCCC----EEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTS
T ss_pred ccccccccc--ccccccccccccccccccccccc-cccccccccccccccccc---ccccccc-cccccccccccccccc
Confidence 999886542 13456778999999999999998 699999999999999984 3344444 6889999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
.++++|+.||.|++||+++ ++.+..+ .|...|++++|+|++ .+|++++.|+.+++||+.....
T Consensus 196 ~~~~~~~~d~~v~i~d~~~---~~~~~~~-~~~~~i~~l~~~~~~-~~l~~~~~d~~i~i~d~~~~~~------------ 258 (337)
T d1gxra_ 196 TKLWTGGLDNTVRSWDLRE---GRQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDK------------ 258 (337)
T ss_dssp SEEEEEETTSEEEEEETTT---TEEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSCE------------
T ss_pred ccccccccccccccccccc---ceeeccc-ccccceEEEEEcccc-cccceecccccccccccccccc------------
Confidence 9999999999999999984 5555555 488999999999987 6899999999999999875510
Q ss_pred CCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc
Q psy4510 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 538 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~ 538 (812)
.
T Consensus 259 -----~-------------------------------------------------------------------------- 259 (337)
T d1gxra_ 259 -----Y-------------------------------------------------------------------------- 259 (337)
T ss_dssp -----E--------------------------------------------------------------------------
T ss_pred -----c--------------------------------------------------------------------------
Confidence 0
Q ss_pred eEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEec
Q psy4510 539 NIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDL 618 (812)
Q Consensus 539 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~ 618 (812)
....|...|++++|+|++++++++ +.||.|++||+
T Consensus 260 -------------------------------------------~~~~~~~~i~~v~~s~~g~~l~s~--s~Dg~i~iwd~ 294 (337)
T d1gxra_ 260 -------------------------------------------QLHLHESCVLSLKFAYCGKWFVST--GKDNLLNAWRT 294 (337)
T ss_dssp -------------------------------------------EECCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEET
T ss_pred -------------------------------------------cccccccccceEEECCCCCEEEEE--eCCCeEEEEEC
Confidence 012234468888999999999998 89999999999
Q ss_pred cccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
.++. ++..+ +|...|++++|+| ++++|++|+.||+|+|||+
T Consensus 295 ~~~~-------------------------~~~~~-~~~~~v~~~~~s~-d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 295 PYGA-------------------------SIFQS-KESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTCC-------------------------EEEEE-ECSSCEEEEEECT-TSCEEEEEETTSCEEEEEE
T ss_pred CCCC-------------------------EEEEc-cCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEEE
Confidence 8876 34443 5788999999999 7889999999999999996
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.4e-36 Score=320.79 Aligned_cols=329 Identities=23% Similarity=0.289 Sum_probs=238.6
Q ss_pred EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCC-----------CCC
Q psy4510 194 TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPG-----------IPT 262 (812)
Q Consensus 194 t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~-----------~~~ 262 (812)
.+..++.+.+|+..........+....+|++.|+||+|+|+|++|++|+ |+.|+||++.++.... ...
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~ 111 (388)
T d1erja_ 33 KKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPEN 111 (388)
T ss_dssp EEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC----------
T ss_pred ccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccc
Confidence 4445778889987765544334444457999999999999999999986 8999999998752000 000
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.......+|...|.+++|+|++ .+|++|+.||.|++|+...+. ....+.+|...|.+++|++++. .+++++.++
T Consensus 112 ~~~~~~~~~~~~V~~l~~s~~~-~~l~s~~~dg~v~i~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~ 185 (388)
T d1erja_ 112 LNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRK----IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDR 185 (388)
T ss_dssp -------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred cccccccCCCCCEEEEEECCCC-Ccceecccccccccccccccc----cccccccccccccccccccccc-cccccccce
Confidence 1112234577789999999998 899999999999999998876 5667788999999999999998 589999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEE-------cccCCCCE
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-------FKHHTAPV 414 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-------~~~h~~~v 414 (812)
.|++||.+.. ...... ..+ ....++.+++ ++++|++|+.||.|++||++. +..+.. ..+|...|
T Consensus 186 ~i~~~d~~~~---~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~---~~~~~~~~~~~~~~~~h~~~v 257 (388)
T d1erja_ 186 TVRIWDLRTG---QCSLTL-SIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET---GFLVERLDSENESGTGHKDSV 257 (388)
T ss_dssp EEEEEETTTT---EEEEEE-ECS-SCEEEEEECSTTCCEEEEEETTSCEEEEETTT---CCEEEEEC------CCCSSCE
T ss_pred eeeeeecccc---cccccc-ccc-cccccccccCCCCCeEEEEcCCCeEEEeeccc---CccceeeccccccccCCCCCE
Confidence 9999999843 333333 333 4445555554 678999999999999999984 333333 34688999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
++++|+|++ .+|++++.|+.|++||+....... ... .+.
T Consensus 258 ~~l~~s~~~-~~l~s~~~d~~i~iwd~~~~~~~~-----------------~~~----------~~~------------- 296 (388)
T d1erja_ 258 YSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKS-----------------DSK----------TPN------------- 296 (388)
T ss_dssp EEEEECTTS-SEEEEEETTSEEEEEEC-----------------------------------------------------
T ss_pred EEEEECCCC-CEEEEEECCCcEEEEeccCCcccc-----------------ccc----------ccc-------------
Confidence 999999987 699999999999999998663210 000 000
Q ss_pred EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcccc
Q psy4510 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRR 574 (812)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (812)
T Consensus 297 -------------------------------------------------------------------------------- 296 (388)
T d1erja_ 297 -------------------------------------------------------------------------------- 296 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC
Q psy4510 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 654 (812)
Q Consensus 575 ~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 654 (812)
..........|...|.+++|+|++++|++| +.||.|++||+.+++ ++.++++
T Consensus 297 -~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg--~~dg~i~vwd~~~~~-------------------------~~~~l~~ 348 (388)
T d1erja_ 297 -SGTCEVTYIGHKDFVLSVATTQNDEYILSG--SKDRGVLFWDKKSGN-------------------------PLLMLQG 348 (388)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEE--ETTSEEEEEETTTCC-------------------------EEEEEEC
T ss_pred -ccceeeecccccceEEEEEECCCCCEEEEE--eCCCEEEEEECCCCc-------------------------EEEEEeC
Confidence 000122344566789999999999999998 899999999999886 7889999
Q ss_pred CCCceEEEEeCCC-----CCCeEEecCCCceEEEEec
Q psy4510 655 HLTEGFAMDWSST-----EPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 655 h~~~V~~l~~sp~-----~~~~las~s~Dg~v~iWd~ 686 (812)
|.+.|+++++++. ++.+||||+.||+|+||++
T Consensus 349 H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~ 385 (388)
T d1erja_ 349 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385 (388)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEee
Confidence 9999999987641 3344444444444444443
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.5e-36 Score=321.97 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=216.0
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
+.++|+|++|+| ++++||+|+.||.|+||++.+++. .....+.+|.++|++|+|+|++++|++++.|+.|++|++.+
T Consensus 6 ~~~pIt~~~~s~-dg~~la~~~~~~~i~iw~~~~~~~--~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~ 82 (371)
T d1k8kc_ 6 LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKW--VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 82 (371)
T ss_dssp CSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEE--EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred CCCCeEEEEECC-CCCEEEEEeCCCEEEEEECCCCCE--EEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecc
Confidence 568899999999 999999999999999999976542 24567889999999999999999999999999999999987
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+ ...+...+.+|...|.+++|+|++ ..|++|+.|++|++|++...............|...|.+++|+|++. +
T Consensus 83 ~-----~~~~~~~~~~~~~~v~~i~~~p~~-~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~ 155 (371)
T d1k8kc_ 83 R-----TWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-L 155 (371)
T ss_dssp T-----EEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-E
T ss_pred c-----cccccccccccccccccccccccc-ccceeecccCcceeeeeeccccccccccccccccccccccccccccc-c
Confidence 5 235566778899999999999998 89999999999999999877654444556678999999999999998 6
Q ss_pred EEEEECCCeEEEEECCCCCcc---------------cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 335 LASCSVDLSIRIWDTRVINTK---------------SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~---------------~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
|++|+.||+|++|++...... ..+... ..|...|.+++|+|++++|++|+.||.|++||++
T Consensus 156 l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~--- 231 (371)
T d1k8kc_ 156 LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD--- 231 (371)
T ss_dssp EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG---
T ss_pred eeccccCcEEEEEeeccCccccccccccccccccceeeeeec-cCccCcEEEEEeecccccccccccCCcceEEeee---
Confidence 999999999999998643211 122233 6788999999999999999999999999999998
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+..+..+..|..+|.+++|+|++ .+|+ ++.|+.+++|.....
T Consensus 232 ~~~~~~~~~~~~~~v~s~~fs~d~-~~la-~g~d~~~~~~~~~~~ 274 (371)
T d1k8kc_ 232 KKMAVATLASETLPLLAVTFITES-SLVA-AGHDCFPVLFTYDSA 274 (371)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETT-EEEE-EETTSSCEEEEEETT
T ss_pred cccceeeeecccccceeeeecCCC-CEEE-EEcCCceEEEEeeCC
Confidence 467889999999999999999986 4555 566888888876554
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=8.1e-35 Score=299.66 Aligned_cols=247 Identities=16% Similarity=0.202 Sum_probs=212.6
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
+.+.+.+++++| +|+.||.++ ++.|.+|++.+.. ....+.+|...|++++|+|+|++|++|+.||.|++|++..
T Consensus 16 ~r~~~~~~a~~~-~g~~l~~~~-~~~v~i~~~~~~~----~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~ 89 (311)
T d1nr0a1 16 ARGTAVVLGNTP-AGDKIQYCN-GTSVYTVPVGSLT----DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89 (311)
T ss_dssp CTTCCCCCEECT-TSSEEEEEE-TTEEEEEETTCSS----CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CCCCeEEEEEcC-CCCEEEEEe-CCEEEEEECCCCc----eeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeec
Confidence 445566789999 999999886 5679999998876 5667889999999999999999999999999999999988
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+ .......+.+|.+.|.+++|+|++ .+|++++. ++.++||++.++. ....+.+|...|++++|+|+++
T Consensus 90 ~-----~~~~~~~~~~~~~~v~~v~~s~d~-~~l~~~~~~~~~~~~v~~~~~~~----~~~~l~~h~~~v~~v~~~~~~~ 159 (311)
T d1nr0a1 90 T-----THILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGT----SNGNLTGQARAMNSVDFKPSRP 159 (311)
T ss_dssp T-----TCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCC----BCBCCCCCSSCEEEEEECSSSS
T ss_pred c-----ccccccccccccCccccccccccc-ccccccccccccccccccccccc----ccccccccccccccccccccce
Confidence 5 223345688999999999999998 67777765 5669999999887 5677889999999999999999
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc-----
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF----- 407 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~----- 407 (812)
.+|++|+.||.|++||+++ ....... ..|...|+++.|+|++++|++|+.||.|++||++. +..+..+
T Consensus 160 ~~l~sgs~d~~i~i~d~~~---~~~~~~~-~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~---~~~~~~~~~~~~ 232 (311)
T d1nr0a1 160 FRIISGSDDNTVAIFEGPP---FKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD---GTKTGVFEDDSL 232 (311)
T ss_dssp CEEEEEETTSCEEEEETTT---BEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEECBCTTS
T ss_pred eeecccccccccccccccc---ccccccc-ccccccccccccCcccccccccccccccccccccc---cccccccccccc
Confidence 7899999999999999984 3444455 78999999999999999999999999999999984 4444444
Q ss_pred --ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 408 --KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 408 --~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+|.+.|++++|+|++ .+|++|+.||.|++||+++.+
T Consensus 233 ~~~~h~~~V~~~~~s~~~-~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 233 KNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp SSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE
T ss_pred ccccccccccccccCCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 3688999999999987 699999999999999998773
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.8e-35 Score=310.98 Aligned_cols=337 Identities=16% Similarity=0.255 Sum_probs=240.7
Q ss_pred EEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-------
Q psy4510 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML------- 359 (812)
Q Consensus 287 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------- 359 (812)
..+.+..++.+.+|+...............+|.+.|++|+|+|+|+ +|++|+ |++|+|||+.++.....+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~-~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~ 107 (388)
T d1erja_ 30 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGE-YLATGC-NKTTQVYRVSDGSLVARLSDDSAANK 107 (388)
T ss_dssp TTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSS-EEEEEC-BSCEEEEETTTCCEEEEECC------
T ss_pred cccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCC-EEEEEe-CCeEEEEEecccceEeeecccccccc
Confidence 4566777889999998766544333444557999999999999998 688876 8999999998543211110
Q ss_pred -------ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 360 -------TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 360 -------~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
.....|...|++++|+|++++|++|+.||.|++||.. .++.+..+.+|...|.++.|++++ ..+++++.
T Consensus 108 ~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~ 183 (388)
T d1erja_ 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE---NRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSG 183 (388)
T ss_dssp -----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEET
T ss_pred cccccccccccCCCCCEEEEEECCCCCcceeccccccccccccc---cccccccccccccccccccccccc-cccccccc
Confidence 0113567789999999999999999999999999998 567888899999999999999986 68999999
Q ss_pred CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe-EEEEeCCCCCcccEEee
Q psy4510 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQLLFIH 511 (812)
Q Consensus 433 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 511 (812)
++.+++||+... ..............+.+++....++++++.++. .+|.......
T Consensus 184 ~~~i~~~d~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~------- 239 (388)
T d1erja_ 184 DRTVRIWDLRTG-----------------QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL------- 239 (388)
T ss_dssp TSEEEEEETTTT-----------------EEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-------
T ss_pred ceeeeeeecccc-----------------ccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCcc-------
Confidence 999999999876 444455556667778888876677777776654 4443222110
Q ss_pred cCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEE
Q psy4510 512 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCIN 591 (812)
Q Consensus 512 ~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 591 (812)
+.. +. .......+|...|.
T Consensus 240 -------------------~~~----------~~--------------------------------~~~~~~~~h~~~v~ 258 (388)
T d1erja_ 240 -------------------VER----------LD--------------------------------SENESGTGHKDSVY 258 (388)
T ss_dssp -------------------EEE----------EC--------------------------------------CCCSSCEE
T ss_pred -------------------cee----------ec--------------------------------cccccccCCCCCEE
Confidence 000 00 00223456788999
Q ss_pred EEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe
Q psy4510 592 RVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 671 (812)
Q Consensus 592 ~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~ 671 (812)
+++|+|++++++++ +.||.|++||+.+......... .....+......|...|++++|+| ++.+
T Consensus 259 ~l~~s~~~~~l~s~--~~d~~i~iwd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~v~~~~~s~-~~~~ 322 (388)
T d1erja_ 259 SVVFTRDGQSVVSG--SLDRSVKLWNLQNANNKSDSKT-------------PNSGTCEVTYIGHKDFVLSVATTQ-NDEY 322 (388)
T ss_dssp EEEECTTSSEEEEE--ETTSEEEEEEC----------------------------CEEEEEECCSSCEEEEEECG-GGCE
T ss_pred EEEECCCCCEEEEE--ECCCcEEEEeccCCcccccccc-------------ccccceeeecccccceEEEEEECC-CCCE
Confidence 99999999999998 8999999999987653211000 001224566677888888888888 5555
Q ss_pred EEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeE------Eec
Q psy4510 672 LATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ------WSP 745 (812)
Q Consensus 672 las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~------fs~ 745 (812)
|++|+.| |.|++||+.+++ ++.++.+|.+.|++++ |+|
T Consensus 323 l~sg~~d--------------------------------g~i~vwd~~~~~----~~~~l~~H~~~V~~~~~~~~~~~sp 366 (388)
T d1erja_ 323 ILSGSKD--------------------------------RGVLFWDKKSGN----PLLMLQGHRNSVISVAVANGSSLGP 366 (388)
T ss_dssp EEEEETT--------------------------------SEEEEEETTTCC----EEEEEECCSSCEEEEEECSSCTTCT
T ss_pred EEEEeCC--------------------------------CEEEEEECCCCc----EEEEEeCCCCCEEEEEEecCcccCC
Confidence 5555555 555555555555 4567889999999886 467
Q ss_pred CCceeEEeeccCCceEEeeecC
Q psy4510 746 GEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 746 dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+++ +|||||.||+|+||+++.
T Consensus 367 d~~-~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 367 EYN-VFATGSGDCKARIWKYKK 387 (388)
T ss_dssp TCE-EEEEEETTSEEEEEEEEE
T ss_pred CCC-EEEEEeCCCEEEEEeeee
Confidence 898 899999999999999864
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.8e-35 Score=299.03 Aligned_cols=291 Identities=17% Similarity=0.214 Sum_probs=236.9
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.+.+.+..++++|+|+.|+.+. ++.+.+|++.++ .....+.+|...|.+++|+|++ .+||+|+.||+|+||
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~-------~~~~~~~~H~~~v~~~~~sp~g-~~latg~~dg~i~iw 85 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL-------TDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIW 85 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCS-------SCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCC-------ceeEEEcCCCCCEEEEEEeCCC-CeEeccccCceEeee
Confidence 3445677899999999999875 667999999874 7778899999999999999998 899999999999999
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC--CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV--DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
|+...... ....+.+|...|.+++|+|+++ +|++++. ++.+++|++++. .....+ .+|...|++++|+|++
T Consensus 86 d~~~~~~~--~~~~~~~~~~~v~~v~~s~d~~-~l~~~~~~~~~~~~v~~~~~~---~~~~~l-~~h~~~v~~v~~~~~~ 158 (311)
T d1nr0a1 86 DTTQTTHI--LKTTIPVFSGPVKDISWDSESK-RIAAVGEGRERFGHVFLFDTG---TSNGNL-TGQARAMNSVDFKPSR 158 (311)
T ss_dssp ESSSTTCC--EEEEEECSSSCEEEEEECTTSC-EEEEEECCSSCSEEEEETTTC---CBCBCC-CCCSSCEEEEEECSSS
T ss_pred eeeccccc--cccccccccCcccccccccccc-ccccccccccccccccccccc---cccccc-cccccccccccccccc
Confidence 99887631 2345778999999999999998 5777775 466999999853 334445 7899999999999999
Q ss_pred C-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 379 P-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
+ +|++|+.||.|++||++ ..+....+..|..+|+++.|+|++ .+|++++.|+.|++||+.....
T Consensus 159 ~~~l~sgs~d~~i~i~d~~---~~~~~~~~~~~~~~i~~v~~~p~~-~~l~~~~~d~~v~~~d~~~~~~----------- 223 (311)
T d1nr0a1 159 PFRIISGSDDNTVAIFEGP---PFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTK----------- 223 (311)
T ss_dssp SCEEEEEETTSCEEEEETT---TBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE-----------
T ss_pred eeeeccccccccccccccc---ccccccccccccccccccccCccc-cccccccccccccccccccccc-----------
Confidence 8 68899999999999998 467788889999999999999987 6999999999999999876521
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
.... ..
T Consensus 224 ------~~~~-------------------------------------------------------~~------------- 229 (311)
T d1nr0a1 224 ------TGVF-------------------------------------------------------ED------------- 229 (311)
T ss_dssp ------EEEC-------------------------------------------------------BC-------------
T ss_pred ------cccc-------------------------------------------------------cc-------------
Confidence 0000 00
Q ss_pred ceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEe
Q psy4510 538 FNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWD 617 (812)
Q Consensus 538 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd 617 (812)
......+|.+.|++++|+|++++|++| +.||.|+|||
T Consensus 230 -----------------------------------------~~~~~~~h~~~V~~~~~s~~~~~l~tg--s~Dg~v~iwd 266 (311)
T d1nr0a1 230 -----------------------------------------DSLKNVAHSGSVFGLTWSPDGTKIASA--SADKTIKIWN 266 (311)
T ss_dssp -----------------------------------------TTSSSCSSSSCEEEEEECTTSSEEEEE--ETTSEEEEEE
T ss_pred -----------------------------------------cccccccccccccccccCCCCCEEEEE--eCCCeEEEEE
Confidence 001234677789999999999999998 8899999999
Q ss_pred ccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC---ceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 618 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
+.+++ +++++..|.. .+.++.|++ ..|++++.||.|++||++
T Consensus 267 ~~t~~-------------------------~~~~l~~~~~~~~~~~~~~~~~---~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 267 VATLK-------------------------VEKTIPVGTRIEDQQLGIIWTK---QALVSISANGFINFVNPE 311 (311)
T ss_dssp TTTTE-------------------------EEEEEECCSSGGGCEEEEEECS---SCEEEEETTCCEEEEETT
T ss_pred CCCCc-------------------------EEEEEECCCCccceEEEEEecC---CEEEEEECCCEEEEEeCC
Confidence 99886 6677766653 455666654 478999999999999964
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.7e-35 Score=312.29 Aligned_cols=212 Identities=16% Similarity=0.167 Sum_probs=180.8
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeC
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~ 302 (812)
..+|+|++|+|++++||+++.++.|+||+..++ ....+..+.+|.+.|.+|+|+|++ .+|++|+.|++|+|||+
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~-----~~~~~~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCC-----CEEEEEEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEee
Confidence 478999999999999999999999999999875 235678889999999999999998 89999999999999999
Q ss_pred CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE
Q psy4510 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 382 (812)
.++.. .....+.+|...|.+++|+|+++ .|++|+.|+.|++|++...............|...|.+++|+|++++|+
T Consensus 81 ~~~~~--~~~~~~~~~~~~v~~i~~~p~~~-~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~ 157 (371)
T d1k8kc_ 81 KGRTW--KPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA 157 (371)
T ss_dssp ETTEE--EEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred ccccc--ccccccccccccccccccccccc-cceeecccCcceeeeeeccccccccccccccccccccccccccccccee
Confidence 86642 12345677899999999999998 6999999999999998765444344445578999999999999999999
Q ss_pred EEeCCCcEEEEecCCCC---------------CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 383 SGGDDGCIHVWDLRRFK---------------KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~---------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|+.||.|++||+.... .+..+.....|...|.+++|+|++ .+|++++.|+.|++||+...
T Consensus 158 s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~s~~~d~~i~iwd~~~~ 233 (371)
T d1k8kc_ 158 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKK 233 (371)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGGT
T ss_pred ccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccc-ccccccccCCcceEEeeecc
Confidence 99999999999986421 123566778899999999999987 68999999999999998654
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.4e-34 Score=302.53 Aligned_cols=294 Identities=20% Similarity=0.301 Sum_probs=248.6
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..++|.||.++|++|+|+|++++|++|+.||.|+|||+.++ +.+..+.+|...|.+++|+|++ .++++|+.|
T Consensus 47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~d 118 (340)
T d1tbga_ 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPSG-NYVACGGLD 118 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT-------EEEEEEECSCSCEEEEEECTTS-SEEEEEETT
T ss_pred eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccc-------eeEEEEecccccEEeeEeeccc-eeeeeeccc
Confidence 45678999999999999999999999999999999999885 7788999999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.+++|+.............+.+|............. .++.+..+.....+..... ...... ..+...+....+
T Consensus 119 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~ 192 (340)
T d1tbga_ 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETG---QQTTTF-TGHTGDVMSLSL 192 (340)
T ss_dssp CCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETT--EEEEEETTTEEEEEETTTT---EEEEEE-ECCSSCEEEEEE
T ss_pred ceeecccccccccccccceeccccccccccccccccc--ccccccccccccccccccc---cccccc-cccceeEeeecc
Confidence 9999999887654333455677788877777766654 4888899999999998742 222222 567788999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
.+.+.++++|+.|+.|++||++ .+.++..+.+|...|++++|+|++ .+|++|+.|+.|++||+.....
T Consensus 193 ~~~~~~~~~~~~d~~v~i~d~~---~~~~~~~~~~h~~~i~~v~~~p~~-~~l~s~s~d~~i~~~~~~~~~~-------- 260 (340)
T d1tbga_ 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQE-------- 260 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------
T ss_pred ccccceeEEeecCceEEEEECC---CCcEEEEEeCCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeeccccc--------
Confidence 9999999999999999999998 577889999999999999999987 6999999999999999876521
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
....
T Consensus 261 ---------~~~~------------------------------------------------------------------- 264 (340)
T d1tbga_ 261 ---------LMTY------------------------------------------------------------------- 264 (340)
T ss_dssp ---------EEEE-------------------------------------------------------------------
T ss_pred ---------cccc-------------------------------------------------------------------
Confidence 0000
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
....+...|.+++|+|++++|++| +.||.|+
T Consensus 265 -----------------------------------------------~~~~~~~~i~~~~~s~~~~~l~~g--~~dg~i~ 295 (340)
T d1tbga_ 265 -----------------------------------------------SHDNIICGITSVSFSKSGRLLLAG--YDDFNCN 295 (340)
T ss_dssp -----------------------------------------------CCTTCCSCEEEEEECSSSCEEEEE--ETTSCEE
T ss_pred -----------------------------------------------ccccccCceEEEEECCCCCEEEEE--ECCCEEE
Confidence 001122367888999999999998 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+||+.++. ++.++.+|.+.|++++|+| ++.+|+||+.||+|+|||
T Consensus 296 iwd~~~~~-------------------------~~~~~~~H~~~V~~l~~s~-d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 296 VWDALKAD-------------------------RAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTTCC-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred EEECCCCc-------------------------EEEEEcCCCCCEEEEEEeC-CCCEEEEEccCCEEEEeC
Confidence 99998876 7889999999999999999 788999999999999997
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-34 Score=301.79 Aligned_cols=317 Identities=19% Similarity=0.304 Sum_probs=238.7
Q ss_pred ceEEcCCCCcE-EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 265 LFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 265 ~~~~~~h~~~v-~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
..+++||.+.| .|++| ++ ++|+||+.||+|+|||+.+++ ....+.+|.+.|++++|+|++ +|++|+.||+
T Consensus 5 ~~tL~GH~~~vitc~~~--~~-~~l~tgs~Dg~i~vWd~~~~~----~~~~l~~H~~~V~~l~~s~~~--~l~s~s~D~~ 75 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--ED-NYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHGG--ILVSGSTDRT 75 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ET-TEEEEEETTTEEEEEETTTTE----EEEEEECCSSCEEEEEEETTT--EEEEEETTCC
T ss_pred cEEECCcCCCcEEEEEE--CC-CEEEEEeCCCeEEEEECCCCc----EEEEEECCCCCEEEEEEcCCC--EEEEEecccc
Confidence 56799999875 56665 45 799999999999999999876 677889999999999999864 6999999999
Q ss_pred EEEEECCCCCcccceeec-CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC--------------------C
Q psy4510 344 IRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG--------------------S 402 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~--------------------~ 402 (812)
|++|++.... +.... ...+......+.+.+++.++++++.|+.|++||++..... .
T Consensus 76 i~iw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (355)
T d1nexb2 76 VRVWDIKKGC---CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 152 (355)
T ss_dssp EEEEETTTTE---EEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTT
T ss_pred cccccccccc---cccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccc
Confidence 9999998532 22222 1333444566778888899999999999999999742110 0
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
.+.....|...+.... +++ .+++++..|+.|++||+...+.
T Consensus 153 ~~~~~~~~~~~v~~~~--~~~-~~~~~~~~d~~i~~~d~~~~~~------------------------------------ 193 (355)
T d1nexb2 153 FVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKC------------------------------------ 193 (355)
T ss_dssp EEEEEECCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEE------------------------------------
T ss_pred eeeeeeeccccccccc--ccc-ceeeeecccceeeeeecccccc------------------------------------
Confidence 1112222333333332 222 4666777777777777654410
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccc
Q psy4510 483 PGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELED 562 (812)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 562 (812)
T Consensus 194 -------------------------------------------------------------------------------- 193 (355)
T d1nexb2 194 -------------------------------------------------------------------------------- 193 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCC
Q psy4510 563 DESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGP 642 (812)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (812)
.....++...+.++.++|++..++++ +.|+.|++|++.++.
T Consensus 194 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~i~i~d~~~~~-------------------- 234 (355)
T d1nexb2 194 -----------------LYILSGHTDRIYSTIYDHERKRCISA--SMDTTIRIWDLENGE-------------------- 234 (355)
T ss_dssp -----------------EEEECCCSSCEEEEEEETTTTEEEEE--ETTSCEEEEETTTCC--------------------
T ss_pred -----------------eeeeeccccccccccccccceeeecc--cccceEEeeeccccc--------------------
Confidence 00111222356677888999999988 899999999999876
Q ss_pred CCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc---------eeEEEEecCCCCEEEeecCCCeE
Q psy4510 643 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---------AWSVYLYTNRFGVLATGDCKRNI 713 (812)
Q Consensus 643 ~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~---------~~~~~~~s~dg~~lasgs~dg~i 713 (812)
++..+.+|...|.+++|++ ++|++++.||+|++||+.++. +..+.++++++++|++|+ |++|
T Consensus 235 -----~~~~~~~h~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i 305 (355)
T d1nexb2 235 -----LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQF 305 (355)
T ss_dssp -----EEEEECCCSSCCCEEEECS---SEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEE-TTEE
T ss_pred -----ccccccccccccccccccc---ceeeeeecccccccccccccceecccccCCceEEEEEcCCCCEEEEEe-CCEE
Confidence 6788999999999999976 499999999999999998743 334557889999888876 8899
Q ss_pred EEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 714 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 714 ~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+|||+++++. +...+.+|.+.|++|+|+|+ . ++++++.||+++||-+
T Consensus 306 ~vwd~~tg~~---~~~~~~~~~~~V~~v~~~~~-~-~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 306 NIYNLRSGKL---VHANILKDADQIWSVNFKGK-T-LVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EEEETTTCCB---CCSCTTTTCSEEEEEEEETT-E-EEEEEESSSCEEEEEE
T ss_pred EEEECCCCCE---EEEEecCCCCCEEEEEEcCC-e-EEEEEECCCcEEEEEE
Confidence 9999999985 33567899999999999986 3 7899999999776643
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.9e-33 Score=293.84 Aligned_cols=260 Identities=18% Similarity=0.299 Sum_probs=220.2
Q ss_pred CCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 162 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 162 ~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
+.+..+..+++.||.+.|++++|+| ++++||||+.||+|+|||+.+++ ....+..|..+|.+++|+|++++++++
T Consensus 41 ~~~~~~~~~tL~GH~~~I~~l~~s~-~~~~l~sgs~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~v~~~~~~~~l~~~ 115 (340)
T d1tbga_ 41 GRIQMRTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp CCCCCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTE----EEEEEECSCSCEEEEEECTTSSEEEEE
T ss_pred cccceeeeEEECCCCCCEEEEEECC-CCCEEEEEECCCceeeeecccce----eEEEEecccccEEeeEeeccceeeeee
Confidence 3455667778899999999999999 99999999999999999999876 567788999999999999999999999
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
+.|+.+++|+..... ........+.+|............ ..++.+..+.....+...... .......+...
T Consensus 116 ~~d~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 186 (340)
T d1tbga_ 116 GLDNICSIYNLKTRE---GNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQ----QTTTFTGHTGD 186 (340)
T ss_dssp ETTCCEEEEESSSSC---SCCCEEEEECCCSSCEEEEEEEET--TEEEEEETTTEEEEEETTTTE----EEEEEECCSSC
T ss_pred cccceeecccccccc---cccccceecccccccccccccccc--ccccccccccccccccccccc----cccccccccee
Confidence 999999999987642 123445667888888877777665 578888889999999987765 34455667788
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
+....+.+.+. ++++++.|+.|++||++. ..++..+ .+|...|++++|+|++++|++|+.||.|++||++. .
T Consensus 187 ~~~~~~~~~~~-~~~~~~~d~~v~i~d~~~---~~~~~~~-~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~---~ 258 (340)
T d1tbga_ 187 VMSLSLAPDTR-LFVSGACDASAKLWDVRE---GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRA---D 258 (340)
T ss_dssp EEEEEECTTSS-EEEEEETTTEEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---T
T ss_pred Eeeeccccccc-eeEEeecCceEEEEECCC---CcEEEEE-eCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc---c
Confidence 99999999888 699999999999999984 4556666 78999999999999999999999999999999984 3
Q ss_pred CceEE--cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVAT--FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~--~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+.. ...|...|++++|+|++ .+|++|+.||.|++||+...
T Consensus 259 ~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~g~~dg~i~iwd~~~~ 302 (340)
T d1tbga_ 259 QELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEEEEECCTTCCSCEEEEEECSSS-CEEEEEETTSCEEEEETTTC
T ss_pred ccccccccccccCceEEEEECCCC-CEEEEEECCCEEEEEECCCC
Confidence 44443 34567889999999987 69999999999999998765
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-34 Score=303.80 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=193.6
Q ss_pred ccCcCCCCCce-EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 169 LFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i-~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
...++||.+.| +|++ + ++++||||+.||+|+|||+.+++ ....+.+|.++|++++|+|+ .+|++++.|+.|
T Consensus 5 ~~tL~GH~~~vitc~~--~-~~~~l~tgs~Dg~i~vWd~~~~~----~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i 76 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQ--F-EDNYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHG-GILVSGSTDRTV 76 (355)
T ss_dssp EEEEECCSSSCEEEEE--E-ETTEEEEEETTTEEEEEETTTTE----EEEEEECCSSCEEEEEEETT-TEEEEEETTCCE
T ss_pred cEEECCcCCCcEEEEE--E-CCCEEEEEeCCCeEEEEECCCCc----EEEEEECCCCCEEEEEEcCC-CEEEEEeccccc
Confidence 44567999886 5555 4 67899999999999999998876 67789999999999999985 589999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec--------------
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-------------- 311 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-------------- 311 (812)
++|+.... ........ +........+++++ ..+++++.|+.|++|++.+.......
T Consensus 77 ~iw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (355)
T d1nexb2 77 RVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 148 (355)
T ss_dssp EEEETTTT-------EEEEEECCCSSCEEEEEEEEETTE-EEEEEEETTSEEEEEECCC-----------CCCEEESCTT
T ss_pred cccccccc-------cccccccccccccccccccccccc-ceeeeecCCCcEEEEEccCCceeccccccceeccceeccc
Confidence 99999874 33333333 33345667778877 78999999999999999875421000
Q ss_pred -----cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 312 -----QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 312 -----~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
......|...+.. +.+++. +++++..|+.|++||++. ...+... ..+...+.++.|+++++++++++.
T Consensus 149 ~~~~~~~~~~~~~~~v~~--~~~~~~-~~~~~~~d~~i~~~d~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (355)
T d1nexb2 149 ENPYFVGVLRGHMASVRT--VSGHGN-IVVSGSYDNTLIVWDVAQ---MKCLYIL-SGHTDRIYSTIYDHERKRCISASM 221 (355)
T ss_dssp TCTTEEEEEECCSSCEEE--EEEETT-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEEETTTTEEEEEET
T ss_pred cccceeeeeeeccccccc--cccccc-eeeeecccceeeeeeccc---ccceeee-eccccccccccccccceeeecccc
Confidence 0111223334433 344556 799999999999999984 3344444 678889999999999999999999
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
||.|++||++ .+..+..+.+|...|.+++|++ .+|++++.||.|++||+...
T Consensus 222 d~~i~i~d~~---~~~~~~~~~~h~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~ 273 (355)
T d1nexb2 222 DTTIRIWDLE---NGELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDY 273 (355)
T ss_dssp TSCEEEEETT---TCCEEEEECCCSSCCCEEEECS---SEEEEECTTSEEEEEETTTC
T ss_pred cceEEeeecc---cccccccccccccccccccccc---ceeeeeeccccccccccccc
Confidence 9999999998 5778899999999999999975 48999999999999998755
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3e-33 Score=286.95 Aligned_cols=292 Identities=14% Similarity=0.169 Sum_probs=224.3
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDC 293 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~ 293 (812)
..+.+.||..+|++|+|+|++++|++|+.|+.|++||+.++ +++..+ .+|...|.+++|+|++ .+++++.
T Consensus 4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~h~~~v~~v~~~~~g--~~~~~~~ 74 (299)
T d1nr0a2 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG-------ISNRVFPDVHATMITGIKTTSKG--DLFTVSW 74 (299)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEECSSCSCSSCEEEEEECTTS--CEEEEET
T ss_pred cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEcCCCCCcEEEEEeeccc--eeecccc
Confidence 46788999999999999999999999999999999999885 555555 4789999999999997 4666778
Q ss_pred CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 294 KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 294 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|+.+++|+....... ........+...+.+++|+|++. ++++ +.++.+++|+... .... .....+.+++
T Consensus 75 d~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~g~-~~~~-~~~~~i~~~~~~~------~~~~--~~~~~~~~~~ 143 (299)
T d1nr0a2 75 DDHLKVVPAGGSGVD-SSKAVANKLSSQPLGLAVSADGD-IAVA-ACYKHIAIYSHGK------LTEV--PISYNSSCVA 143 (299)
T ss_dssp TTEEEEECSSSSSSC-TTSCCEEECSSCEEEEEECTTSS-CEEE-EESSEEEEEETTE------EEEE--ECSSCEEEEE
T ss_pred eeeEEEeccCCcccc-ccccccccccccccccccccccc-cccc-ccccccccccccc------cccc--cccccccccc
Confidence 999999998765321 11223345778899999999998 3444 4567999999652 1111 2345688999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCc-eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSS-VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
|+|++++|++|+.||.|++||++. ... ......|...|++++|+|++ .+|++++.|+.|++||+......
T Consensus 144 ~s~~~~~l~~g~~dg~i~~~d~~~---~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~~~~~~~~~----- 214 (299)
T d1nr0a2 144 LSNDKQFVAVGGQDSKVHVYKLSG---ASVSEVKTIVHPAEITSVAFSNNG-AFLVATDQSRKVIPYSVANNFEL----- 214 (299)
T ss_dssp ECTTSCEEEEEETTSEEEEEEEET---TEEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSCEEEEEGGGTTEE-----
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccccc-ccccccccccccccccccccccc-----
Confidence 999999999999999999999974 222 22445689999999999987 69999999999999998765210
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
.
T Consensus 215 ------------~------------------------------------------------------------------- 215 (299)
T d1nr0a2 215 ------------A------------------------------------------------------------------- 215 (299)
T ss_dssp ------------S-------------------------------------------------------------------
T ss_pred ------------c-------------------------------------------------------------------
Confidence 0
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcce
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK 612 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~ 612 (812)
....+..|...|++++|+|++++++++ +.||.
T Consensus 216 ----------------------------------------------~~~~~~~h~~~v~~l~~s~~~~~l~sg--s~dg~ 247 (299)
T d1nr0a2 216 ----------------------------------------------HTNSWTFHTAKVACVSWSPDNVRLATG--SLDNS 247 (299)
T ss_dssp ----------------------------------------------CCCCCCCCSSCEEEEEECTTSSEEEEE--ETTSC
T ss_pred ----------------------------------------------ccccccccccccccccccccccceEEE--cCCCE
Confidence 001123456688999999999999998 89999
Q ss_pred EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC-CceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 613 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
|++||+.+.... ++....+|. ..|.+++|.+ +.+|+|++.|++|++||+.
T Consensus 248 i~iwd~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~~~--~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 248 VIVWNMNKPSDH-----------------------PIIIKGAHAMSSVNSVIWLN--ETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEEEETTCTTSC-----------------------CEEETTSSTTSCEEEEEEEE--TTEEEEEETTSCEEEEECC
T ss_pred EEEEECCCCCcc-----------------------eEEEecCCCCCcEEEEEECC--CCEEEEEeCCCEEEEEecc
Confidence 999999876421 233334444 4566666644 4689999999999999973
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-32 Score=284.75 Aligned_cols=329 Identities=19% Similarity=0.280 Sum_probs=242.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..+.|.||++.|.+ +++++|++|+||+.|++|+|||+.++ +++.++.+|.+.|.+++|+| .+|++|+.|
T Consensus 8 ~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~-------~~~~~~~~h~~~V~~v~~~~---~~l~s~s~D 76 (342)
T d2ovrb2 8 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMRD---NIIISGSTD 76 (342)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEET---TEEEEEETT
T ss_pred cCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCC-------CEEEEEeCCCCCEEEEEeCC---Cccccceec
Confidence 56779999999865 46677999999999999999999885 78899999999999999987 489999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.+++|+..... .......+...+......+. .++.+..|+.+.+|+.++.. ....+ ..+..... .+
T Consensus 77 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~i~~~~~~~~~---~~~~~-~~~~~~~~--~~ 143 (342)
T d2ovrb2 77 RTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQ---CLHVL-MGHVAAVR--CV 143 (342)
T ss_dssp SCEEEEETTTTE----EEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEESSSCC---EEEEE-ECCSSCEE--EE
T ss_pred cccccccccccc----ceecccccceeEeeeecccc---cccccccceeEEEeeccccc---ceeee-ecccccce--ee
Confidence 999999998765 23334445556666655443 57889999999999998543 22332 22222222 33
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
.+....+++++.|+.|++||++ ....+..+.+|...+..+.+. + .+|++++.||.|++||+...+.
T Consensus 144 ~~~~~~~~~~~~d~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~--~-~~l~s~~~dg~i~~~d~~~~~~-------- 209 (342)
T d2ovrb2 144 QYDGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQFD--G-IHVVSGSLDTSIRVWDVETGNC-------- 209 (342)
T ss_dssp EECSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEEC--S-SEEEEEETTSCEEEEETTTCCE--------
T ss_pred ccccceeeeecCCCeEEEeecc---cceeeEEEcCcccccccccCC--C-CEEEEEeCCCeEEEeeccccee--------
Confidence 4456688999999999999998 466788889998888777664 3 5899999999999999876521
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+.
T Consensus 210 ---------~~--------------------------------------------------------------------- 211 (342)
T d2ovrb2 210 ---------IH--------------------------------------------------------------------- 211 (342)
T ss_dssp ---------EE---------------------------------------------------------------------
T ss_pred ---------ee---------------------------------------------------------------------
Confidence 00
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
....|...+.++++ ++++++++ +.||.|+
T Consensus 212 -----------------------------------------------~~~~~~~~v~~~~~--~~~~l~s~--s~d~~i~ 240 (342)
T d2ovrb2 212 -----------------------------------------------TLTGHQSLTSGMEL--KDNILVSG--NADSTVK 240 (342)
T ss_dssp -----------------------------------------------EECCCCSCEEEEEE--ETTEEEEE--ETTSCEE
T ss_pred -----------------------------------------------EecccccceeEEec--CCCEEEEE--cCCCEEE
Confidence 01122224444444 44678888 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEE
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV 694 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~ 694 (812)
+|++...... ..+.....|...+.++++++ .++++|+.||+|++||+.+++.+..
T Consensus 241 iwd~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~~i~~ 295 (342)
T d2ovrb2 241 IWDIKTGQCL----------------------QTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRN 295 (342)
T ss_dssp EEETTTCCEE----------------------EEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEeccccccc----------------------ccccccceeeeceeecccCC---CeeEEEcCCCEEEEEECCCCCEEEE
Confidence 9999876511 01222334667788888766 3788888888888877765544332
Q ss_pred EEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCc----eEEeeecC
Q psy4510 695 YLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS----NRIGARRD 767 (812)
Q Consensus 695 ~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~----i~iWd~~~ 767 (812)
.. .....+|.+.|++++|+|++. +||+|+.||+ |++||+..
T Consensus 296 ~~-------------------------------~~~~~~~~~~v~~v~~s~~~~-~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 296 LV-------------------------------TLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp EE-------------------------------ECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCC
T ss_pred Ee-------------------------------cccCCCCCCCEEEEEECCCCC-EEEEEeCCCCCeeEEEEEeCCC
Confidence 21 112357888999999999998 8999999996 99999864
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.4e-32 Score=280.08 Aligned_cols=289 Identities=13% Similarity=0.195 Sum_probs=220.5
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-CCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
...++||.+.|++++|+| ++++||||+.||+|+|||+.+++ ..+.+ .+|...|++++|+|+++ +++++.|+.+
T Consensus 5 ~~~~~GH~~~V~~l~~s~-dg~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v 78 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGI----SNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHL 78 (299)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC----EEECSSCSCSSCEEEEEECTTSC-EEEEETTTEE
T ss_pred ceEcCCCCCCcEEEEECC-CCCEEEEEcCCCeEEEEECCCCc----EEEEEcCCCCCcEEEEEeeccce-eecccceeeE
Confidence 445679999999999999 99999999999999999998876 33444 57999999999999986 5566789999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++|+..... ..........|...+.+++|+|++ .++++++ ++.+++|+..... ... ....+.+++|
T Consensus 79 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~g-~~~~~~~-~~~i~~~~~~~~~------~~~--~~~~~~~~~~ 144 (299)
T d1nr0a2 79 KVVPAGGSG----VDSSKAVANKLSSQPLGLAVSADG-DIAVAAC-YKHIAIYSHGKLT------EVP--ISYNSSCVAL 144 (299)
T ss_dssp EEECSSSSS----SCTTSCCEEECSSCEEEEEECTTS-SCEEEEE-SSEEEEEETTEEE------EEE--CSSCEEEEEE
T ss_pred EEeccCCcc----cccccccccccccccccccccccc-ccccccc-ccccccccccccc------ccc--cccccccccc
Confidence 999987642 112223345678889999999998 5555554 5789999954321 111 3346789999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
+|+++ +|++|+.||.|++||++... ........|...|++++|+|++++|++|+.||.|++||+...........+
T Consensus 145 s~~~~-~l~~g~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~ 220 (299)
T d1nr0a2 145 SNDKQ-FVAVGGQDSKVHVYKLSGAS---VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW 220 (299)
T ss_dssp CTTSC-EEEEEETTSEEEEEEEETTE---EEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC
T ss_pred ccccc-cccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99998 69999999999999997432 222222578899999999999999999999999999999753333345567
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC-CceeEEEEcCCCCCEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-KEIKELHWHPQLPGTI 486 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~~ 486 (812)
.+|..+|++++|+|++ .+|++|+.||.|++||+...... .......+. ..+..+.|.+. ..+
T Consensus 221 ~~h~~~v~~l~~s~~~-~~l~sgs~dg~i~iwd~~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~--~~l 283 (299)
T d1nr0a2 221 TFHTAKVACVSWSPDN-VRLATGSLDNSVIVWNMNKPSDH--------------PIIIKGAHAMSSVNSVIWLNE--TTI 283 (299)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCTTSC--------------CEEETTSSTTSCEEEEEEEET--TEE
T ss_pred cccccccccccccccc-cceEEEcCCCEEEEEECCCCCcc--------------eEEEecCCCCCcEEEEEECCC--CEE
Confidence 7899999999999987 69999999999999999876431 233333333 35777766654 466
Q ss_pred EEEeCCC-eEEEE
Q psy4510 487 ISTANSG-FNIFR 498 (812)
Q Consensus 487 ~~~~~~~-~~~~~ 498 (812)
++++.|+ +.+|+
T Consensus 284 ~s~s~D~~i~iWd 296 (299)
T d1nr0a2 284 VSAGQDSNIKFWN 296 (299)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEeCCCEEEEEe
Confidence 6677666 45554
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-31 Score=279.31 Aligned_cols=241 Identities=21% Similarity=0.369 Sum_probs=191.4
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+....++||.+.|.+ ++++ +|++||||+.||+|+|||+.+++ ....+.+|...|.+++|+++ +|++++.|+.
T Consensus 7 ~~~~~l~GH~~~V~s-~~~~-~g~~l~sgs~Dg~i~vWd~~~~~----~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~ 78 (342)
T d2ovrb2 7 KSPKVLKGHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 78 (342)
T ss_dssp CCCEEEECSTTSCEE-EEEE-ETTEEEEEETTSCEEEEETTTCC----EEEECCCCSSCEEEEEEETT--EEEEEETTSC
T ss_pred CcCEEECCcCCceEE-EEEE-CCCEEEEEeCCCeEEEEECCCCC----EEEEEeCCCCCEEEEEeCCC--ccccceeccc
Confidence 455667799999875 4677 88999999999999999999887 67789999999999999874 8999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
+++|+.... ........+...+......+ ..++.+..|+.+.+|+..++. ....+..+......
T Consensus 79 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~----~~~~~~~~~~~~~~-- 142 (342)
T d2ovrb2 79 LKVWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ----CLHVLMGHVAAVRC-- 142 (342)
T ss_dssp EEEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC----EEEEEECCSSCEEE--
T ss_pred ccccccccc-------cceecccccceeEeeeeccc---ccccccccceeEEEeeccccc----ceeeeeccccccee--
Confidence 999998874 44445555566666665554 578889999999999999876 23333333333332
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
+.+... .+++++.|+.|++||.+ ...++..+ .+|...+..+.+ ++.++++|+.||.|++||++ ..+.+..
T Consensus 143 ~~~~~~-~~~~~~~d~~i~~~d~~---~~~~~~~~-~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~---~~~~~~~ 212 (342)
T d2ovrb2 143 VQYDGR-RVVSGAYDFMVKVWDPE---TETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE---TGNCIHT 212 (342)
T ss_dssp EEECSS-CEEEEETTSCEEEEEGG---GTEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT---TCCEEEE
T ss_pred eccccc-eeeeecCCCeEEEeecc---cceeeEEE-cCcccccccccC--CCCEEEEEeCCCeEEEeecc---cceeeeE
Confidence 333344 58899999999999998 34455555 677777766655 57799999999999999998 5678899
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+|...+.++.+++ .+|++++.|+.|++||+...
T Consensus 213 ~~~~~~~v~~~~~~~---~~l~s~s~d~~i~iwd~~~~ 247 (342)
T d2ovrb2 213 LTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTG 247 (342)
T ss_dssp ECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTC
T ss_pred ecccccceeEEecCC---CEEEEEcCCCEEEEEecccc
Confidence 999999999998875 48999999999999998765
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.9e-30 Score=269.06 Aligned_cols=259 Identities=16% Similarity=0.179 Sum_probs=203.2
Q ss_pred CccCcCCCC-CceEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCccccc----ccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 168 PLFSFSGHL-TEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVD----QKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 168 ~i~~~~gh~-~~i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~~~~~----~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
.+..+.||. ..|++++|+|. ++.+||||+.||+|+|||+......... ...+..|.++|.+++|++++++|+++
T Consensus 54 ~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~ 133 (325)
T d1pgua1 54 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133 (325)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCcccee
Confidence 344445774 67999999983 6689999999999999998765532221 12356789999999999999999877
Q ss_pred eC--CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC
Q psy4510 242 DD--PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 242 ~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
+. ++.+++|+..++ +++..+.+|...|.+++|+|+++.++++++.|+.|++|++...+.. .......+|.
T Consensus 134 ~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-~~~~~~~~~~ 205 (325)
T d1pgua1 134 GEGRDNFGVFISWDSG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-ASDRTHHKQG 205 (325)
T ss_dssp ECCSSCSEEEEETTTC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-EEECSSSCTT
T ss_pred eccccceEEEEeeccc-------ccceeeeecccccccccccccccceEEEeecccccccccccccccc-eecccccCCC
Confidence 64 677999999875 7888899999999999999998777899999999999998776421 1234456788
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc---CCCCEEEEEeCCCcEEEEecC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN---RTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~~~l~sg~~dg~i~iwd~~ 396 (812)
..|.+++|+|++..+|++++.||.|++||+++ ...+..+ .+|...+.++.|+ +++++|++|+.|+.|+|||++
T Consensus 206 ~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~---~~~~~~l-~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~ 281 (325)
T d1pgua1 206 SFVRDVEFSPDSGEFVITVGSDRKISCFDGKS---GEFLKYI-EDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281 (325)
T ss_dssp CCEEEEEECSTTCCEEEEEETTCCEEEEETTT---CCEEEEC-CBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred CccEEeeeccccceeccccccccceeeeeecc---ccccccc-cccccccccceeeeeccCCCEEEEEeCCCeEEEEECC
Confidence 89999999998766899999999999999984 4455555 5666666544444 678899999999999999998
Q ss_pred CCCCCCceEEcccCCCC--EEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 397 RFKKGSSVATFKHHTAP--VTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.++++..+..|... +..+++.+.+..+|++++.||.|++||+
T Consensus 282 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 282 ---TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ---TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ---CCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 46777777666544 3334443333358999999999999996
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.7e-30 Score=264.86 Aligned_cols=294 Identities=14% Similarity=0.124 Sum_probs=215.1
Q ss_pred ceEEEEeCCCCCCeEEEecCCC-cEEEEccCCCCcccccccccCCC-CCCeeeeeEcC--CCCcEEEeeCCCceEEeeCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKR-NIHIWTPREAGAWQVDQKPLGGH-TNSAEDLQWSD--LKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg-~v~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~s~--~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+++++|+| +++.||.++.+. .|+.|+..... ......+.+| ...|++++|+| ++++|++|+.||+|+||++.
T Consensus 19 ~~t~l~~~~-~~~~la~~~~~~~~i~~~~~~~~~--~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~ 95 (325)
T d1pgua1 19 FTTHLSYDP-TTNAIAYPCGKSAFVRCLDDGDSK--VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95 (325)
T ss_dssp CCCCCEEET-TTTEEEEEETTEEEEEECCSSCCS--SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred CeEEEEECC-CCCEEEEEeCCCEEEEEEeCCCCC--ccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeec
Confidence 356799999 999999886543 34555543332 2245566777 46899999998 56799999999999999987
Q ss_pred CCCCCCC-CCCCceEEcCCCCcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 254 RGKGPGI-PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 254 ~~~~~~~-~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
.+..... .......+..|.++|.+++|++++ .+|++++ .++.+++|+..++. ....+.+|...|.+++|+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~~~~ 170 (325)
T d1pgua1 96 FDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGN----SLGEVSGHSQRINACHLKQS 170 (325)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCC----EEEECCSCSSCEEEEEECSS
T ss_pred CCcceeeeecccccccccccCcEEEEEECCCC-CccceeeccccceEEEEeecccc----cceeeeeccccccccccccc
Confidence 6410000 001112345788999999999999 5666554 47789999998876 56778899999999999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEccc
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
++.++++++.|+.|++||.+........... ..|...|.+++|+|+ +.+|++|+.||.|++||++ .++.+..+.+
T Consensus 171 ~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~---~~~~~~~l~~ 246 (325)
T d1pgua1 171 RPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SGEFLKYIED 246 (325)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TCCEEEECCB
T ss_pred ccceEEEeecccccccccccccccceecccc-cCCCCccEEeeeccccceeccccccccceeeeeec---cccccccccc
Confidence 9877899999999999999754433333333 678889999999997 5699999999999999998 5778899998
Q ss_pred CCCCEEEEEEc---cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 410 HTAPVTTVEWH---PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 410 h~~~v~~v~~~---p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
|..++.++.|+ |++ .+|++++.|+.|++||+...+.. .....+.....+..+++.+.....+
T Consensus 247 ~~~~v~~~~~s~~~~dg-~~l~s~s~D~~i~iwd~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l 311 (325)
T d1pgua1 247 DQEPVQGGIFALSWLDS-QKFATVGADATIRVWDVTTSKCV--------------QKWTLDKQQLGNQQVGVVATGNGRI 311 (325)
T ss_dssp TTBCCCSCEEEEEESSS-SEEEEEETTSEEEEEETTTTEEE--------------EEEECCTTCGGGCEEEEEEEETTEE
T ss_pred cccccccceeeeeccCC-CEEEEEeCCCeEEEEECCCCCEE--------------EEEEecCCcccCeEEEEEECCCCEE
Confidence 88877655555 454 69999999999999999877321 1122233333344444444434677
Q ss_pred EEEeCCC-eEEEE
Q psy4510 487 ISTANSG-FNIFR 498 (812)
Q Consensus 487 ~~~~~~~-~~~~~ 498 (812)
++++.++ +.+|+
T Consensus 312 ~s~s~dg~i~vwd 324 (325)
T d1pgua1 312 ISLSLDGTLNFYE 324 (325)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEECCCEEEEEE
Confidence 7777666 45553
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.3e-30 Score=262.28 Aligned_cols=282 Identities=19% Similarity=0.200 Sum_probs=215.3
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
++++++.||.+.|.+|+|+| |+||+.||+|++||+.+. ..+|...|.+++++++.. +++++.|+
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~-----l~sgs~Dg~v~~Wd~~~~---------~~~h~~~V~~~~~~~~~~--~~s~s~D~ 67 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSM---------HQDHSNLIVSLDNSKAQE--YSSISWDD 67 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT-----TEEEETTSCEEETTTTEE---------ECCCCSCEEEEECCSTTC--CEEEETTT
T ss_pred ceeEEECCCCCceEEEEECc-----EEEEeCCCeEEEEECCCC---------CCCCCCCEEEEEecCCCe--EEEEeecc
Confidence 78899999999999999987 899999999999998653 246999999999998764 89999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+|++|++... .....+.++++++++.++++++ ++.+.+|+.. .+..+..+..+ ..+. +++|+
T Consensus 68 ~v~~w~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~-~~~~--~~~~~ 129 (287)
T d1pgua2 68 TLKVNGITKH-----------EFGSQPKVASANNDGFTAVLTN-DDDLLILQSF---TGDIIKSVRLN-SPGS--AVSLS 129 (287)
T ss_dssp EEEETTEEEE-----------ECSSCEEEEEECSSSEEEEEET-TSEEEEEETT---TCCEEEEEECS-SCEE--EEEEC
T ss_pred cccccccccc-----------ccccceeeeeeccCCceEEEee-cccceeeecc---ceeeeeecccc-ceee--eeecc
Confidence 9999997621 1234578889998887666654 5568888887 45566666533 4444 45666
Q ss_pred CCcEEEEEECC-CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 423 ESSTFASGGAD-DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 423 ~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
+ ..+++++.+ +.+++|++..... ..
T Consensus 130 ~-~~~~v~~~~~~~v~~~~~~~~~~-----------------~~------------------------------------ 155 (287)
T d1pgua2 130 Q-NYVAVGLEEGNTIQVFKLSDLEV-----------------SF------------------------------------ 155 (287)
T ss_dssp S-SEEEEEETTTSCEEEEETTEEEE-----------------EE------------------------------------
T ss_pred C-cceeeeccccceeeeeeccccce-----------------ee------------------------------------
Confidence 5 466666665 4799999754310 00
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
.
T Consensus 156 -------------------------------------------------------------------------------~ 156 (287)
T d1pgua2 156 -------------------------------------------------------------------------------D 156 (287)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------e
Confidence 0
Q ss_pred EEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEE
Q psy4510 582 YFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 661 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~ 661 (812)
....|.+.+++++|+|++++|+++ +.||.|++||+.++.. ....+.+|...|.+
T Consensus 157 ~~~~~~~~v~~~~~s~~~~~l~~g--~~dg~i~i~d~~~~~~------------------------~~~~~~~h~~~v~~ 210 (287)
T d1pgua2 157 LKTPLRAKPSYISISPSETYIAAG--DVMGKILLYDLQSREV------------------------KTSRWAFRTSKINA 210 (287)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTTEE------------------------EECCSCCCSSCEEE
T ss_pred eeeccCCceeEEEeccCccccccc--cccccccceeeccccc------------------------ccccccccccccce
Confidence 001233468889999999999998 8999999999987752 12346789999999
Q ss_pred EEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 662 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 662 l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
++|+| .+..... +.+++.+||+|+.|++|++|++.++.. ++..+.+|...|+++
T Consensus 211 ~~~~p-~~~~~~~----------------------~~~~~~~l~sgs~D~~i~iw~~~~~~~---~~~~~~~h~~~V~~v 264 (287)
T d1pgua2 211 ISWKP-AEKGANE----------------------EEIEEDLVATGSLDTNIFIYSVKRPMK---IIKALNAHKDGVNNL 264 (287)
T ss_dssp EEECC-CC----------------------------CCSCCEEEEEETTSCEEEEESSCTTC---CEEETTSSTTCEEEE
T ss_pred eeecc-ccccccc----------------------ccCCCCeeEeecCCCeEEEEECCCCCe---EEEEeCCCCCCeEEE
Confidence 99999 5533333 345678999999999999999987554 567789999999999
Q ss_pred EEecCCceeEEeeccCCceEEeee
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+|+|++. |+|+|.|++|++|++
T Consensus 265 ~~~~~~~--l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 265 LWETPST--LVSSGADACIKRWNV 286 (287)
T ss_dssp EEEETTE--EEEEETTSCEEEEEE
T ss_pred EECCCCE--EEEEECCCeEEEEEE
Confidence 9999874 899999999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.1e-28 Score=256.82 Aligned_cols=221 Identities=11% Similarity=0.032 Sum_probs=166.9
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+..+.+|.+.|++|+|+|++++|++|+.|++|+|||+..+. ....+....+|.+.|.+++|+|++..+|++|+.|
T Consensus 3 ~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~----~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA----KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT----TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred eEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCC----cceEEEEecCCCCCEEEEEEeCCCCCEEEEcccc
Confidence 345788999999999999999999999999999999998741 1122334457999999999999875789999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCC-CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc--CCCCeEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--HTSDVNV 371 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~ 371 (812)
|.|++|++..... ......+. .......+.++.. .+++++.++.+++||++.............. .......
T Consensus 79 ~~v~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (342)
T d1yfqa_ 79 GEILKVDLIGSPS----FQALTNNEANLGICRICKYGDD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKI 153 (342)
T ss_dssp SCEEEECSSSSSS----EEECBSCCCCSCEEEEEEETTT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCE
T ss_pred cceeeeecccccc----cccccccccccccccccccccc-cccccccccccceeeccccccceeeecccccccccceeee
Confidence 9999999988763 22333333 3344445555555 7999999999999998754333222211122 2334556
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 372 ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 372 l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+.+.+..+++++.||.|++||++.............+...+.+..+.|.+...+++++.||.+.+|++...
T Consensus 154 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~ 226 (342)
T d1yfqa_ 154 FTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred eeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCC
Confidence 6777888899999999999999998655444555555667778888888776789999999999999998765
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.4e-27 Score=240.85 Aligned_cols=202 Identities=21% Similarity=0.347 Sum_probs=162.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+.....|...|+|++| ++++|++|+.||+|+|||+.++ +++.++.+|.+.|.+++|+ + .+|++|+.|
T Consensus 7 ~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~-------~~~~~l~~H~~~V~~v~~~--~-~~l~s~s~D 74 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQYD--E-RVIITGSSD 74 (293)
T ss_dssp CEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEECC--S-SEEEEEETT
T ss_pred EEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCC-------cEEEEEecCCCCEeeeecc--c-ceeeccccc
Confidence 34456678889998765 7899999999999999999885 8899999999999999985 3 699999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|++|++..+.. ......+... ...+.+... .++++..++.+++|+............+ ..|...+.++.+
T Consensus 75 ~~i~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 146 (293)
T d1p22a2 75 STVRVWDVNTGEM----LNTLIHHCEA--VLHLRFNNG-MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF 146 (293)
T ss_dssp SCEEEEESSSCCE----EEEECCCCSC--EEEEECCTT-EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE
T ss_pred ccccccccccccc----cccccccccc--ccccccccc-ceeecccccceeEeeccccccccccccc-ccccccccccee
Confidence 9999999998762 2333323322 233444445 5899999999999999866544444444 678888988887
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+ ..+++++.|+.|++||++ ..+.+..+.+|...|..+.+++ ..+++++.|+.|++||+...
T Consensus 147 ~~--~~~~~~s~d~~i~~~d~~---~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~ 208 (293)
T d1p22a2 147 DD--KYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECG 208 (293)
T ss_dssp ET--TEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEET---TEEEEEETTSCEEEEETTTC
T ss_pred cc--cccccccCCCceeeecCC---CCcEEEEEcccccccccccCCC---CeEEEecCCCEEEEEecccc
Confidence 64 478899999999999998 5678889999999999988874 48999999999999998765
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=6.2e-29 Score=252.80 Aligned_cols=280 Identities=14% Similarity=0.134 Sum_probs=206.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
++++|.+|..+|++|+|+| |++|+.||+|++||+.++ ..+|...|.++++++. ..+++++.|
T Consensus 5 ~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~------------~~~h~~~V~~~~~~~~--~~~~s~s~D 66 (287)
T d1pgua2 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM------------HQDHSNLIVSLDNSKA--QEYSSISWD 66 (287)
T ss_dssp EEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE------------ECCCCSCEEEEECCST--TCCEEEETT
T ss_pred eeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC------------CCCCCCCEEEEEecCC--CeEEEEeec
Confidence 5678999999999999987 999999999999998763 3579999999999976 468999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
++|++|++.... ....+..+++++++. ++..+.++.+.+|+..... .+..+ .+...+. ++
T Consensus 67 ~~v~~w~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~--~~ 126 (287)
T d1pgua2 67 DTLKVNGITKHE-----------FGSQPKVASANNDGF--TAVLTNDDDLLILQSFTGD---IIKSV--RLNSPGS--AV 126 (287)
T ss_dssp TEEEETTEEEEE-----------CSSCEEEEEECSSSE--EEEEETTSEEEEEETTTCC---EEEEE--ECSSCEE--EE
T ss_pred cccccccccccc-----------cccceeeeeeccCCc--eEEEeecccceeeecccee---eeeec--cccceee--ee
Confidence 999999976432 234577889998875 4445667789999987433 34433 2233344 45
Q ss_pred cCCCCEEEEEeCCC-cEEEEecCCCCCCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 375 NRTEPLIVSGGDDG-CIHVWDLRRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 375 ~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
++++..+++++.++ .+++|++.. ...... ...|...+++++|+|++ .+|++|+.||.|++||+.....
T Consensus 127 ~~~~~~~~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~g~~dg~i~i~d~~~~~~------ 196 (287)
T d1pgua2 127 SLSQNYVAVGLEEGNTIQVFKLSD---LEVSFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQSREV------ 196 (287)
T ss_dssp EECSSEEEEEETTTSCEEEEETTE---EEEEEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE------
T ss_pred eccCcceeeeccccceeeeeeccc---cceeeeeeeccCCceeEEEeccCc-cccccccccccccceeeccccc------
Confidence 66777777777764 799999974 223333 34578899999999997 6999999999999999976621
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
.... ...+..+|.+++|+|...
T Consensus 197 -----------~~~~------------------------------------------~~~h~~~v~~~~~~p~~~----- 218 (287)
T d1pgua2 197 -----------KTSR------------------------------------------WAFRTSKINAISWKPAEK----- 218 (287)
T ss_dssp -----------EECC------------------------------------------SCCCSSCEEEEEECCCC------
T ss_pred -----------cccc------------------------------------------ccccccccceeeeccccc-----
Confidence 1000 001223555666665511
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcce
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK 612 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~ 612 (812)
....+.+++.++++| +.|++
T Consensus 219 ----------------------------------------------------------~~~~~~~~~~~l~sg--s~D~~ 238 (287)
T d1pgua2 219 ----------------------------------------------------------GANEEEIEEDLVATG--SLDTN 238 (287)
T ss_dssp ---------------------------------------------------------------CCSCCEEEEE--ETTSC
T ss_pred ----------------------------------------------------------ccccccCCCCeeEee--cCCCe
Confidence 112234567788888 89999
Q ss_pred EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 613 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
|+||++.... .++..+.+|...|++++|+| ++ .|+|++.|++|++|++
T Consensus 239 i~iw~~~~~~------------------------~~~~~~~~h~~~V~~v~~~~-~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 239 IFIYSVKRPM------------------------KIIKALNAHKDGVNNLLWET-PS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EEEEESSCTT------------------------CCEEETTSSTTCEEEEEEEE-TT-EEEEEETTSCEEEEEE
T ss_pred EEEEECCCCC------------------------eEEEEeCCCCCCeEEEEECC-CC-EEEEEECCCeEEEEEE
Confidence 9999997643 15777889999999999999 55 6899999999999986
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.7e-27 Score=239.39 Aligned_cols=244 Identities=22% Similarity=0.390 Sum_probs=195.9
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+.|..+.+|...|+|++ + ++++||||+.||+|+|||+.+++ ....+.+|..+|++++| ++++|++|+.|+
T Consensus 5 ~~~i~~~~~~~~~V~c~~--~-d~~~l~sgs~Dg~i~vWd~~~~~----~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~ 75 (293)
T d1p22a2 5 LQRIHCRSETSKGVYCLQ--Y-DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVLCLQY--DERVIITGSSDS 75 (293)
T ss_dssp CCCEECCCSSCCCEEEEE--C-CSSEEEEEESSSCEEEEESSSCC----EEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred EEEEeccCCCCCCEEEEE--E-cCCEEEEEeCCCeEEEEECCCCc----EEEEEecCCCCEeeeec--ccceeecccccc
Confidence 566777778999999976 5 78999999999999999999887 67888999999999987 578999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.+++|++..+ ........+..... .+.+.. ..++++..++.+.+|+........ ....+..|...|..+
T Consensus 76 ~i~~~~~~~~-------~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~ 144 (293)
T d1p22a2 76 TVRVWDVNTG-------EMLNTLIHHCEAVL--HLRFNN-GMMVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVV 144 (293)
T ss_dssp CEEEEESSSC-------CEEEEECCCCSCEE--EEECCT-TEEEEEETTSCEEEEECSSSSCCE-EEEEECCCSSCEEEE
T ss_pred cccccccccc-------cccccccccccccc--cccccc-cceeecccccceeEeecccccccc-ccccccccccccccc
Confidence 9999999875 44444444443333 333444 689999999999999998765322 244567788899988
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
.+.+. .+++++.|+.|++||+++ ...+..+ .++...+..+.++ +.++++|+.||.|++||++ ....+.
T Consensus 145 ~~~~~---~~~~~s~d~~i~~~d~~~---~~~~~~~-~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~---~~~~~~ 212 (293)
T d1p22a2 145 DFDDK---YIVSASGDRTIKVWNTST---CEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLR 212 (293)
T ss_dssp EEETT---EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEE
T ss_pred eeccc---ccccccCCCceeeecCCC---CcEEEEE-cccccccccccCC--CCeEEEecCCCEEEEEecc---cceeee
Confidence 88764 578999999999999984 4445555 6788888888876 5689999999999999998 567888
Q ss_pred EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 406 TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 406 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+.+|...+..+.+ ++ .+|++++.||.|++||+...
T Consensus 213 ~~~~~~~~v~~~~~--~~-~~l~sg~~dg~i~iwd~~~~ 248 (293)
T d1p22a2 213 VLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAA 248 (293)
T ss_dssp EECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHH
T ss_pred eecccceeeeeccc--cc-eEEEEEcCCCEEEEEECCCC
Confidence 88899998876544 43 68999999999999998654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.8e-28 Score=252.60 Aligned_cols=301 Identities=10% Similarity=0.034 Sum_probs=215.5
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCC-CcEEEeeCCC
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLK-TALQTVDDPF 245 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~ 245 (812)
+.|...++|.+.|++++|+| ++++||||+.||+|+|||+....... ......+|..+|.+++|+|++ .+|++|+.|+
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~-~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~ 79 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNV-DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEE-EEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CeEEcCCCCCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcce-EEEEecCCCCCEEEEEEeCCCCCEEEEccccc
Confidence 34556678999999999999 99999999999999999998765432 223344799999999999875 5789999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCc-EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC--CCCE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTE-GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH--TNSV 322 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h--~~~v 322 (812)
.|++|++... ........+... .....+.+.. ..+++++.++++++||++..............+ ....
T Consensus 80 ~v~~w~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~ 151 (342)
T d1yfqa_ 80 EILKVDLIGS-------PSFQALTNNEANLGICRICKYGD-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKN 151 (342)
T ss_dssp CEEEECSSSS-------SSEEECBSCCCCSCEEEEEEETT-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCC
T ss_pred ceeeeecccc-------ccccccccccccccccccccccc-ccccccccccccceeeccccccceeeeccccccccccee
Confidence 9999999874 444444444433 3444455555 899999999999999987654322222222222 2344
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
..+.+.+.+. .+++++.||.|++||++........... ..+...+.+..+.+ ++..+++++.||.+.+|+.......
T Consensus 152 ~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~ 229 (342)
T d1yfqa_ 152 KIFTMDTNSS-RLIVGMNNSQVQWFRLPLCEDDNGTIEE-SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD 229 (342)
T ss_dssp CEEEEEECSS-EEEEEESTTEEEEEESSCCTTCCCEEEE-CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS
T ss_pred eeeeeeccCC-ceeeecCCCcEEEEecccCcccceeeee-cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcce
Confidence 5666777777 6999999999999999865544433333 44555666766665 4569999999999999998642111
Q ss_pred ---Cc---------eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC
Q psy4510 402 ---SS---------VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG 469 (812)
Q Consensus 402 ---~~---------~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (812)
.. ......|...|++|+|+|++ .+|++|+.||.|++||+.+. +.+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~-~~lasg~~Dg~v~vWD~~~~-----------------~~l~~~~~ 291 (342)
T d1yfqa_ 230 YNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTR-----------------KKIKNFAK 291 (342)
T ss_dssp TTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTT-----------------EEEEECCC
T ss_pred eeccccceeeeeeeccCCCcccccceeEEecCCc-cEEEEECCCCEEEEEECCCC-----------------cEEEEecC
Confidence 00 11123567789999999997 58999999999999999887 33333333
Q ss_pred CCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 470 QKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 470 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
...+..++|+|++..++++++++.+.+|
T Consensus 292 ~~~~~~~~~s~~~~~l~~a~sdd~~~~~ 319 (342)
T d1yfqa_ 292 FNEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp CSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred CCCCEEEEEEeCCCEEEEEEcCCcEEEe
Confidence 3455567777777677777776655444
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=4.7e-28 Score=258.24 Aligned_cols=341 Identities=13% Similarity=0.128 Sum_probs=230.5
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEE------EecCCCCCEEEE
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAM------DWSSTEPGVLAT 290 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l------~~sp~~~~~l~s 290 (812)
...++|...|.++++++ ++|++++.|++|+||+..+.... .+.........|...+..+ ..+.....++++
T Consensus 8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCC-cccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 34679999999999874 68999999999999998764211 0112223334455544332 222222246889
Q ss_pred EeCCCcEEEEeCCCCCccee------ccccccCCCCCEEEEEEcCCCC----eEEEEEECCCeEEEEECCCCCccc----
Q psy4510 291 GDCKRNIHIWTPREAGAWQV------DQKPLVGHTNSVEDLQWSPGEK----RVLASCSVDLSIRIWDTRVINTKS---- 356 (812)
Q Consensus 291 g~~dg~i~vwd~~~~~~~~~------~~~~~~~h~~~v~~~~~~p~~~----~~l~s~~~dg~i~iwd~~~~~~~~---- 356 (812)
++.||.|++|++........ .......+...+..++|.++.. ..+++++.||.+++|++.......
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~ 164 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence 99999999999765542110 0111223456788888887642 468999999999999985321110
Q ss_pred ----------ceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE------EcccCCCCEEEEEEc
Q psy4510 357 ----------CMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA------TFKHHTAPVTTVEWH 420 (812)
Q Consensus 357 ----------~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~------~~~~h~~~v~~v~~~ 420 (812)
........+...+++++|+|++ +|++|+.||.|+|||++. ++++. .+.+|..+|++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~---~~~~~~~~~~~~l~~h~~~V~~l~~s 240 (393)
T d1sq9a_ 165 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST---LRPLYNFESQHSMINNSNSIRSVKFS 240 (393)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT---TEEEEEEECCC---CCCCCEEEEEEC
T ss_pred eeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecc---cccccccccccccccccceEEEcccc
Confidence 0111124456678999999987 899999999999999984 44443 345799999999999
Q ss_pred cCCCcEEEEEECCCC---EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 421 PTESSTFASGGADDQ---IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 421 p~~~~~l~s~~~dg~---v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
|++ .+|++|+.|++ |++||+..... +..... .
T Consensus 241 pdg-~~l~sgs~D~t~~~i~lwd~~~g~~-----------------~~~l~~---------~------------------ 275 (393)
T d1sq9a_ 241 PQG-SLLAIAHDSNSFGCITLYETEFGER-----------------IGSLSV---------P------------------ 275 (393)
T ss_dssp SST-TEEEEEEEETTEEEEEEEETTTCCE-----------------EEEECB---------C------------------
T ss_pred ccc-ceeeeecCCCCcceeeeccccccee-----------------eeeecc---------c------------------
Confidence 997 69999999875 89999987621 100000 0
Q ss_pred EeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 498 RTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
. ...
T Consensus 276 --------------------------~--------------------------------------------------~~~ 279 (393)
T d1sq9a_ 276 --------------------------T--------------------------------------------------HSS 279 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------c--------------------------------------------------ccc
Confidence 0 000
Q ss_pred ccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC
Q psy4510 578 VMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 657 (812)
Q Consensus 578 ~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~ 657 (812)
.....+.+|.+.|++++|+|++++|+++ +.|++|+|||+.++. ++.+++||..
T Consensus 280 ~~~~~~~gH~~~V~~l~fspd~~~l~S~--s~D~~v~vWd~~~g~-------------------------~~~~l~gH~~ 332 (393)
T d1sq9a_ 280 QASLGEFAHSSWVMSLSFNDSGETLCSA--GWDGKLRFWDVKTKE-------------------------RITTLNMHCD 332 (393)
T ss_dssp ----CCBSBSSCEEEEEECSSSSEEEEE--ETTSEEEEEETTTTE-------------------------EEEEEECCGG
T ss_pred cceeeeecccCceeeeccCCCCCeeEEE--CCCCEEEEEECCCCC-------------------------EEEEECCcCC
Confidence 1122456799999999999999999998 899999999999987 7899999998
Q ss_pred ceE----EEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 658 EGF----AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 658 ~V~----~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
.|. .++|+| ++..+++++.. .++.|. .+... .......+.+++++.|+.|++|.-
T Consensus 333 ~v~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~--~~~~~--~~~~~~~~~~~~~~~d~~ir~~~~ 391 (393)
T d1sq9a_ 333 DIEIEEDILAVDE-HGDSLAEPGVF-DVKFLK--KGWRS--GMGADLNESLCCVCLDRSIRWFRE 391 (393)
T ss_dssp GCSSGGGCCCBCT-TSCBCSSCCEE-EEEEEC--TTTSB--STTCTTSCEEEEEETTTEEEEEEE
T ss_pred cccCCccEEEECC-CCCEEEEcccc-eEEECc--cCcee--ccccCCCCEEEEEEcCCeEEEEeC
Confidence 876 588999 77788766532 122222 11110 001122356889999999999973
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=6.5e-28 Score=257.17 Aligned_cols=280 Identities=11% Similarity=0.156 Sum_probs=183.8
Q ss_pred eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec--cccccCCCCCEEEE------EEcCCCCeEEEE
Q psy4510 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD--QKPLVGHTNSVEDL------QWSPGEKRVLAS 337 (812)
Q Consensus 266 ~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~~------~~~p~~~~~l~s 337 (812)
...++|.+.|+++++++ .+|+||+.|++|+|||.......... ......|...+..+ ........++++
T Consensus 8 ~~~~~H~~~I~~v~~~~---~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 8 NAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred ecCCcccCccEEEEEeC---CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence 34578999999999875 58999999999999997765421111 11122344333322 223333347889
Q ss_pred EECCCeEEEEECCCCCcccceeec------CCcCCCCeEEEEEcCCC-----CEEEEEeCCCcEEEEecCCCCC------
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTL------PNAHTSDVNVISWNRTE-----PLIVSGGDDGCIHVWDLRRFKK------ 400 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~v~~l~~~~~~-----~~l~sg~~dg~i~iwd~~~~~~------ 400 (812)
++.||.|++|++............ ...+...+..++|.++. .++++++.||.+++|++.....
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~ 164 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 164 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee
Confidence 999999999998654332222110 12355678888888764 4889999999999999853211
Q ss_pred --CC-------ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC
Q psy4510 401 --GS-------SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK 471 (812)
Q Consensus 401 --~~-------~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (812)
.. .......+...+++++|+|++ +|++|+.|++|++||+.+.+. +....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs~Dg~i~iwd~~~~~~-----------------~~~~~--- 222 (393)
T d1sq9a_ 165 LNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRP-----------------LYNFE--- 222 (393)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEE-----------------EEEEE---
T ss_pred eeeccceecccceecccCCCCcEEEEEECCCC--EEEEEeCCCcEEEEeeccccc-----------------ccccc---
Confidence 00 111223456678999999985 899999999999999986621 00000
Q ss_pred ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcc
Q psy4510 472 EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTS 551 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~ 551 (812)
T Consensus 223 -------------------------------------------------------------------------------- 222 (393)
T d1sq9a_ 223 -------------------------------------------------------------------------------- 222 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc---eEEEEeccccccccCCc
Q psy4510 552 TEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG---KVGIWDLKTALQTVDDP 628 (812)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg---~I~iwd~~~~~~~~~~~ 628 (812)
....+.+|...|.+++|+|+|++|++| +.|+ .|++||+.++.......
T Consensus 223 ---------------------------~~~~l~~h~~~V~~l~~spdg~~l~sg--s~D~t~~~i~lwd~~~g~~~~~l~ 273 (393)
T d1sq9a_ 223 ---------------------------SQHSMINNSNSIRSVKFSPQGSLLAIA--HDSNSFGCITLYETEFGERIGSLS 273 (393)
T ss_dssp ---------------------------CCC---CCCCCEEEEEECSSTTEEEEE--EEETTEEEEEEEETTTCCEEEEEC
T ss_pred ---------------------------cccccccccceEEEcccccccceeeee--cCCCCcceeeecccccceeeeeec
Confidence 012345677899999999999999998 6665 59999998875221000
Q ss_pred ccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCcee
Q psy4510 629 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 692 (812)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~ 692 (812)
...........+.||.+.|++|+|+| ++++|+|+|.|++|+|||+++|+.+
T Consensus 274 ------------~~~~~~~~~~~~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~vWd~~~g~~~ 324 (393)
T d1sq9a_ 274 ------------VPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERI 324 (393)
T ss_dssp ------------BC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ------------cccccccceeeeecccCceeeeccCC-CCCeeEEECCCCEEEEEECCCCCEE
Confidence 00011224455679999999999999 7778888888888877777655433
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=1e-27 Score=252.24 Aligned_cols=192 Identities=9% Similarity=-0.029 Sum_probs=154.2
Q ss_pred eeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC--CcEEEEeCC
Q psy4510 227 EDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK--RNIHIWTPR 303 (812)
Q Consensus 227 ~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--g~i~vwd~~ 303 (812)
.+-.||| ||+++|+++. +.|.+|++..+ .+..+ +|...|.+++|+|++ ++|++++.+ ..|++||+.
T Consensus 6 ~~~~fSP~dG~~~a~~~~-g~v~v~d~~~~--------~~~~~-~~~~~v~~~~~spDg-~~l~~~~~~~g~~v~v~d~~ 74 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVSR-GQAFIQDVSGT--------YVLKV-PEPLRIRYVRRGGDT-KVAFIHGTREGDFLGIYDYR 74 (360)
T ss_dssp GEEEEEECGGGCEEEEET-TEEEEECTTSS--------BEEEC-SCCSCEEEEEECSSS-EEEEEEEETTEEEEEEEETT
T ss_pred hcccccCCCCCEEEEEEC-CeEEEEECCCC--------cEEEc-cCCCCEEEEEECCCC-CEEEEEEcCCCCEEEEEECC
Confidence 4567999 9999998864 79999999774 23333 799999999999999 566655443 379999998
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
++. ...+..|...|.+++|+|+++ .|++++.++.+++|++.... ....+ ..|...+.+++|+|+|++|+.
T Consensus 75 ~~~-----~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~spdg~~la~ 144 (360)
T d1k32a3 75 TGK-----AEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGK---PTVIE-RSREAMITDFTISDNSRFIAY 144 (360)
T ss_dssp TCC-----EEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCC---EEEEE-ECSSSCCCCEEECTTSCEEEE
T ss_pred CCc-----EEEeeCCCceEEeeeeccccc-ccceeccccccccccccccc---eeeee-ecccccccchhhccceeeeee
Confidence 875 456778999999999999999 69999999999999998433 33333 678888999999999998886
Q ss_pred Ee----------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 384 GG----------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 384 g~----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+. .++.+++||+.. .....+..|...+..+.|+|++ +.|++++.++.+.+||....
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~d~~~----~~~~~~~~~~~~~~~~~~spdg-~~l~~~s~~~~~~~~d~~~~ 210 (360)
T d1k32a3 145 GFPLKHGETDGYVMQAIHVYDMEG----RKIFAATTENSHDYAPAFDADS-KNLYYLSYRSLDPSPDRVVL 210 (360)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTT----TEEEECSCSSSBEEEEEECTTS-CEEEEEESCCCCCEECSSSS
T ss_pred eccccccceeeccccceeeecccc----CceeeecccccccccccccCCC-CEEEEEeCCCceEccccccc
Confidence 53 345699999963 3455566678889999999997 68999999999999997654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=2.1e-27 Score=249.74 Aligned_cols=192 Identities=11% Similarity=-0.015 Sum_probs=158.3
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC--ceEEeeCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAEHNKKRGKG 257 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~~~~ 257 (812)
.+-.|||.+|+++|+++. |.|+|||+.++.. . .+ +|...|++++|+|||++|++++.+. .|++|+..+
T Consensus 6 ~~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~----~-~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~--- 75 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVSR-GQAFIQDVSGTYV----L-KV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT--- 75 (360)
T ss_dssp GEEEEEECGGGCEEEEET-TEEEEECTTSSBE----E-EC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT---
T ss_pred hcccccCCCCCEEEEEEC-CeEEEEECCCCcE----E-Ec-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC---
Confidence 346799988999999874 7999999987652 2 22 6999999999999999998877553 799999987
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.....+..|...+.+++|+|++ .+|++++.++.+++|++.++. ....+..|...+.+++|+|+++. |+.
T Consensus 76 -----~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~spdg~~-la~ 144 (360)
T d1k32a3 76 -----GKAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGK----PTVIERSREAMITDFTISDNSRF-IAY 144 (360)
T ss_dssp -----CCEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCCEEECTTSCE-EEE
T ss_pred -----CcEEEeeCCCceEEeeeecccc-cccceeccccccccccccccc----eeeeeecccccccchhhccceee-eee
Confidence 4566788999999999999999 899999999999999999887 45667778889999999999995 554
Q ss_pred EE----------CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 338 CS----------VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 338 ~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
++ .++.+++||+... . ...+ ..+...+.+++|+|+|++|++++.++.+++||...
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~d~~~~---~-~~~~-~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~ 209 (360)
T d1k32a3 145 GFPLKHGETDGYVMQAIHVYDMEGR---K-IFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 209 (360)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTT---E-EEEC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred eccccccceeeccccceeeeccccC---c-eeee-cccccccccccccCCCCEEEEEeCCCceEcccccc
Confidence 32 3457999999843 2 2233 45677889999999999999999999999999863
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.95 E-value=8.1e-27 Score=250.46 Aligned_cols=364 Identities=8% Similarity=-0.056 Sum_probs=248.3
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee-ccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-DQKPL 315 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~~~ 315 (812)
++++.+.++.|.+||..++ +.+..+..|. .+..++|||+| ++|++++.|++|++||+.+++.... .....
T Consensus 34 ~~v~~~d~g~v~v~D~~t~-------~v~~~~~~g~-~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~ 104 (432)
T d1qksa2 34 FSVTLRDAGQIALIDGSTY-------EIKTVLDTGY-AVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 104 (432)
T ss_dssp EEEEETTTTEEEEEETTTC-------CEEEEEECSS-CEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred EEEEEcCCCEEEEEECCCC-------cEEEEEeCCC-CeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceEEEEEecC
Confidence 4578889999999999986 7888888764 69999999999 8999999999999999988763221 12334
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.+|.+.+.+..|+|+|++++++++.++.|++||..++ ..+..+ ..|...+..+.+.+
T Consensus 105 ~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~---~~~~~~-~~~~~~~~~~~~~~------------------- 161 (432)
T d1qksa2 105 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL---EPKKIQ-STRGMTYDEQEYHP------------------- 161 (432)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC---CEEEEE-ECCEECTTTCCEES-------------------
T ss_pred CCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccc---cceeee-ccCCccccceeccC-------------------
Confidence 4566777778889999987899999999999999843 333333 23332222222222
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
......+.++|++..++++...++.|.+||....+.. .+.... ....+..
T Consensus 162 ---------------~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~--------------~~~~i~-~g~~~~~ 211 (432)
T d1qksa2 162 ---------------EPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL--------------KTTEIS-AERFLHD 211 (432)
T ss_dssp ---------------CCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE--------------EEEEEE-CCSSEEE
T ss_pred ---------------CCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcc--------------eEEEEc-ccCcccc
Confidence 2334456788887666677777888999988765321 122222 2345788
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 476 LHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
+.|+|++..++++...+....+...... .+++....+
T Consensus 212 ~~~spdg~~~~va~~~~~~v~v~d~~~~-------------------------~~~~~~~~g------------------ 248 (432)
T d1qksa2 212 GGLDGSHRYFITAANARNKLVVIDTKEG-------------------------KLVAIEDTG------------------ 248 (432)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTT-------------------------EEEEEEECS------------------
T ss_pred ceECCCCCEEEEeccccceEEEeecccc-------------------------eEEEEeccC------------------
Confidence 9999998777777766665544443321 111110000
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHN 635 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 635 (812)
....|........+...+....+. ...++.|.+|......
T Consensus 249 --------------------------~~~~~~~~~~~~~~~~~g~~~~~~-~lg~~~v~~~~~~~~~------------- 288 (432)
T d1qksa2 249 --------------------------GQTPHPGRGANFVHPTFGPVWATS-HMGDDSVALIGTDPEG------------- 288 (432)
T ss_dssp --------------------------SSSBCCTTCEEEEETTTEEEEEEE-BSSSSEEEEEECCTTT-------------
T ss_pred --------------------------ccccccCcccceecCCCCceeccc-ccCCceEEeccccccc-------------
Confidence 000111122223333333333332 2457889999876543
Q ss_pred cccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce----eEEEEecCCCCEEEeecCCC
Q psy4510 636 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA----WSVYLYTNRFGVLATGDCKR 711 (812)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~----~~~~~~s~dg~~lasgs~dg 711 (812)
+..|...|...+++| ++..+++++.+.+.++|...+... ....++ ||++.|++++.|+
T Consensus 289 ----------------~~~~~~~v~~~~~~~-~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v-pDg~~la~~s~d~ 350 (432)
T d1qksa2 289 ----------------HPDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDP 350 (432)
T ss_dssp ----------------CTTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE-EEGGGCCCSSSCC
T ss_pred ----------------ccccccEEEEEEEcC-CCCeEEEEecCCccceeecccCCCCCCeeeEEEE-EechhhcccccCC
Confidence 346777899999999 888999999999999998876321 222233 8999999999999
Q ss_pred eEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEee----ccCCceEEeeecCcce
Q psy4510 712 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC----SVDRSNRIGARRDMLY 770 (812)
Q Consensus 712 ~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~----s~Dg~i~iWd~~~~~~ 770 (812)
.+++|++.++. .+..|...|.+++|||||+++++|. ..|+.|+|||.+..+.
T Consensus 351 ~~k~w~~~~~~-------~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~ 406 (432)
T d1qksa2 351 EFKTLPIAEWA-------GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 406 (432)
T ss_dssp CEEEECHHHHH-------TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred ceEeccccccc-------ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceE
Confidence 99999986543 4456778899999999999655554 2578999999998873
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.93 E-value=6.6e-25 Score=235.40 Aligned_cols=354 Identities=9% Similarity=-0.051 Sum_probs=236.0
Q ss_pred EEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE---E
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS---F 268 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~---~ 268 (812)
+++.+.+|+|.|||..+++ .+..+..|. .+..++|||||++|++++.|+.+++||+.++ ....... .
T Consensus 35 ~v~~~d~g~v~v~D~~t~~----v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~-----~~~~~~~i~~~ 104 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYE----IKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMK-----EPTTVAEIKIG 104 (432)
T ss_dssp EEEETTTTEEEEEETTTCC----EEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSS-----SCCEEEEEECC
T ss_pred EEEEcCCCEEEEEECCCCc----EEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCC-----CceEEEEEecC
Confidence 3556669999999999988 666776664 6999999999999999999999999999885 1222222 2
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-------ccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-------KPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.+|.+.+.+..|+|+|+.++++++.+++|++||..+++...... .....+......+.++|+++.++++...+
T Consensus 105 ~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~ 184 (432)
T d1qksa2 105 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 184 (432)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccC
Confidence 35666777788899995556888899999999999876321110 01123556778899999999878888889
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcc-----cCCCCEE
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFK-----HHTAPVT 415 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~-----~h~~~v~ 415 (812)
+.|.+||....... .+..+ .+...+..++|+|+|+++++++ .++.+.++|.+. .+.+..+. .|.....
T Consensus 185 ~~i~~~d~~~~~~~-~~~~i--~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~---~~~~~~~~~g~~~~~~~~~~ 258 (432)
T d1qksa2 185 GKILLVDYTDLNNL-KTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDTGGQTPHPGRGA 258 (432)
T ss_dssp TEEEEEETTCSSEE-EEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSSBCCTTCE
T ss_pred CeEEEEEccCCCcc-eEEEE--cccCccccceECCCCCEEEEeccccceEEEeeccc---ceEEEEeccCccccccCccc
Confidence 99999998754322 12232 4556789999999999666665 456889999873 44444332 2344445
Q ss_pred EEEEccCCCcEEEEEE-CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 416 TVEWHPTESSTFASGG-ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
...+...+ ...++.. .++.|.+|+....... .....+....+.|++..+++....+..
T Consensus 259 ~~~~~~~g-~~~~~~~lg~~~v~~~~~~~~~~~--------------------~~~~~v~~~~~~~~g~~~~~~s~p~~~ 317 (432)
T d1qksa2 259 NFVHPTFG-PVWATSHMGDDSVALIGTDPEGHP--------------------DNAWKILDSFPALGGGSLFIKTHPNSQ 317 (432)
T ss_dssp EEEETTTE-EEEEEEBSSSSEEEEEECCTTTCT--------------------TTBTSEEEEEECSCSCCCCEECCTTCS
T ss_pred ceecCCCC-ceecccccCCceEEeccccccccc--------------------ccccEEEEEEEcCCCCeEEEEecCCcc
Confidence 55554443 3444433 3778999987654210 111245556666654434443333333
Q ss_pred EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcccc
Q psy4510 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRR 574 (812)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (812)
.+|....
T Consensus 318 ~lw~~~~------------------------------------------------------------------------- 324 (432)
T d1qksa2 318 YLYVDAT------------------------------------------------------------------------- 324 (432)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred ceeeccc-------------------------------------------------------------------------
Confidence 3332111
Q ss_pred CCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC
Q psy4510 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 654 (812)
Q Consensus 575 ~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 654 (812)
...|.....++++ ||++.++++ +.|+.+++|++.+... +..
T Consensus 325 --------~~~~~~~~~sv~v-pDg~~la~~--s~d~~~k~w~~~~~~~----------------------------l~~ 365 (432)
T d1qksa2 325 --------LNPEAEISGSVAV-FDIKAMTGD--GSDPEFKTLPIAEWAG----------------------------ITE 365 (432)
T ss_dssp --------TCSSHHHHTCEEE-EEGGGCCCS--SSCCCEEEECHHHHHT----------------------------CCS
T ss_pred --------CCCCCCeeeEEEE-Eechhhccc--ccCCceEecccccccc----------------------------cCC
Confidence 0111122233454 899999998 8999999999876531 235
Q ss_pred CCCceEEEEeCCCCCCeEEec-----CCCceEEEEecCCCceeEEE
Q psy4510 655 HLTEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 655 h~~~V~~l~~sp~~~~~las~-----s~Dg~v~iWd~~~~~~~~~~ 695 (812)
|...|.+++||| ||+.|+.+ ..++.|+|||..+++++...
T Consensus 366 ~~~~v~~~~fS~-DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i 410 (432)
T d1qksa2 366 GQPRVVQGEFNK-DGTEVWFSVWNGKDQESALVVVDDKTLELKHVI 410 (432)
T ss_dssp SCCEEEEEEECT-TSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred CCCcEEEeEECC-CCCEEEEEEecCCCCCCcEEEEECCCceEEeEe
Confidence 777899999999 77766433 34688999997776665554
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1.1e-23 Score=226.40 Aligned_cols=365 Identities=10% Similarity=-0.009 Sum_probs=228.8
Q ss_pred eEcCCCC--cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 230 QWSDLKT--ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 230 ~~s~~~~--~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
.++.+.+ ++++.+.+|.|++||+.++ +.+.++..|. .+.+++|||+| ++|++++.|++|++||+.+++.
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~-------~~~~~l~~g~-~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~ 95 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGDSK-------KIVKVIDTGY-AVHISRMSASG-RYLLVIGRDARIDMIDLWAKEP 95 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTC-------SEEEEEECCS-SEEEEEECTTS-CEEEEEETTSEEEEEETTSSSC
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECCCC-------cEEEEEeCCC-CeeEEEECCCC-CEEEEEeCCCCEEEEEccCCce
Confidence 3444443 4567788999999999985 7888888775 58999999999 7899999999999999998864
Q ss_pred cee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-------ecCCcCCCCeEEEEEcCCCC
Q psy4510 308 WQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-------TLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 308 ~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~v~~l~~~~~~~ 379 (812)
... ......+|...+.+++|+|+|+.+++++..++.+++||........... .....+......+.+++++.
T Consensus 96 ~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~ 175 (426)
T d1hzua2 96 TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP 175 (426)
T ss_dssp EEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS
T ss_pred eEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCC
Confidence 221 1233456777788889999999877888899999999998543211110 01012344556677777777
Q ss_pred EEEE-EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 380 LIVS-GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 380 ~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
.++. ....+.+.+++... ..........+...+..+.|+|++..++++...+..+.+++....+.
T Consensus 176 ~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~------------ 241 (426)
T d1hzua2 176 EFIVNVKETGKVLLVNYKD--IDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRL------------ 241 (426)
T ss_dssp EEEEEETTTTEEEEEECSS--SSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEE------------
T ss_pred EEEEecCCCCeEEEEEecc--ccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccE------------
Confidence 4444 33446666666653 22333445567888999999999865555555677899999987732
Q ss_pred CCCceEEeec-CCC--ceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 459 LPSQLLFIHL-GQK--EIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 459 ~~~~~~~~~~-~~~--~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
..... +.. ......+.+. +...+......++ +.+.....
T Consensus 242 -----~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~d--~~v~~~~~ 283 (426)
T d1hzua2 242 -----SALVDVGKTPHPGRGANFVHP-------------------------------KYGPVWSTSHLGD--GSISLIGT 283 (426)
T ss_dssp -----EEEEECSSCCCCSCCEEEEET-------------------------------TTEEEEEEECTTT--CEEEEEEC
T ss_pred -----EEEeccCCcccccceeeeecC-------------------------------CCCceEEeccCCC--ceEEEeec
Confidence 11111 100 0111111111 1111222222222 22222211
Q ss_pred CCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE-----eecCc
Q psy4510 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG-----VWGEV 610 (812)
Q Consensus 536 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~-----~~~~d 610 (812)
.. ... ..........+.+|...+..++|+|++++|++. +++.+
T Consensus 284 ~~------------------~~~--------------~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~ 331 (426)
T d1hzua2 284 DP------------------KNH--------------PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 331 (426)
T ss_dssp CT------------------TTC--------------TTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHH
T ss_pred cc------------------ccc--------------ccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccC
Confidence 10 000 001223456788899999999999999999963 12568
Q ss_pred ceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-Ee----cCCCceEEEEe
Q psy4510 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL-AT----GDCKRNIHIWT 685 (812)
Q Consensus 611 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l-as----~s~Dg~v~iWd 685 (812)
++|+|||+.++....... +......+..|...|.+++||| ||+.+ ++ ++.+++|+|||
T Consensus 332 ~tv~vwd~~t~~~~~~~~----------------~~~~~~~~~~~~~rv~~~~fSp-DGk~i~vs~~~~~~~~~~i~v~D 394 (426)
T d1hzua2 332 QSVAVFDLKNLDAKYQVL----------------PIAEWADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVD 394 (426)
T ss_dssp TCEEEEETTCTTSCCEEE----------------CHHHHHCCCSSCCCEEEEEECS-SSSEEEEEECCCTTSCCEEEEEE
T ss_pred CEEEEEECCCCCcCeEEe----------------ccchhcccCCCCccEEEEEECC-CCCEEEEEEecCCCCCCeEEEEE
Confidence 899999998875210000 0000112345667899999999 67654 44 35688999999
Q ss_pred cCCCceeEEE----EecCCCCEE
Q psy4510 686 PREAGAWSVY----LYTNRFGVL 704 (812)
Q Consensus 686 ~~~~~~~~~~----~~s~dg~~l 704 (812)
..+++++..+ +++|+|+|-
T Consensus 395 ~~T~k~~~~i~~~~~~tp~Gk~~ 417 (426)
T d1hzua2 395 DKTLKLKAVVKDPRLITPTGKFN 417 (426)
T ss_dssp TTTTEEEEEECCTTCCSEEEEEE
T ss_pred CCCCeEEEEECCCCccCCCceEe
Confidence 9988877665 345655553
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=8.4e-24 Score=227.40 Aligned_cols=346 Identities=10% Similarity=0.010 Sum_probs=211.8
Q ss_pred EcCCCCeE-EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce-
Q psy4510 327 WSPGEKRV-LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV- 404 (812)
Q Consensus 327 ~~p~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~- 404 (812)
+..+.+.+ +++.+.||+|++||+.+ .+.+.++ ..| ..+..++|+|+|++|++++.||.|++||+...+. ..+
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~t---~~~~~~l-~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~-~~~~ 99 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGDS---KKIVKVI-DTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP-TKVA 99 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETTT---CSEEEEE-ECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSC-EEEE
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECCC---CcEEEEE-eCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCce-eEEE
Confidence 44554444 57788899999999984 4556666 344 4689999999999999999999999999974221 122
Q ss_pred --EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC-CCceeEEEEcCC
Q psy4510 405 --ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG-QKEIKELHWHPQ 481 (812)
Q Consensus 405 --~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~ 481 (812)
....+|.+.+.+++|+|+|..+++++..++.+++||..... +...... ...+....+.+.
T Consensus 100 ~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 162 (426)
T d1hzua2 100 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-----------------PKQIVSTRGMTVDTQTYHPE 162 (426)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-----------------EEEEEECCEECSSSCCEESC
T ss_pred EEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccc-----------------eeEEeeccCCCccceeecCC
Confidence 22335666677888899986556777789999999998873 2222222 223444555555
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccc
Q psy4510 482 LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELE 561 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 561 (812)
+....++.+.++..++...... +.+.. +....
T Consensus 163 ~~~~~i~~s~d~~~~~~~~~~~------------------------~~i~~-----------~~~~~------------- 194 (426)
T d1hzua2 163 PRVAAIIASHEHPEFIVNVKET------------------------GKVLL-----------VNYKD------------- 194 (426)
T ss_dssp CCEEEEEECSSSSEEEEEETTT------------------------TEEEE-----------EECSS-------------
T ss_pred CceeEEEECCCCCEEEEecCCC------------------------CeEEE-----------EEecc-------------
Confidence 4444444444443333221110 00000 00000
Q ss_pred cccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCC
Q psy4510 562 DDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641 (812)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 641 (812)
.........++...+..++|+|++++++++. ..+..+.+++..++......+.. .
T Consensus 195 --------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~----------~ 249 (426)
T d1hzua2 195 --------------IDNLTVTSIGAAPFLADGGWDSSHRYFMTAA-NNSNKVAVIDSKDRRLSALVDVG----------K 249 (426)
T ss_dssp --------------SSSCEEEEEECCSSEEEEEECTTSCEEEEEE-TTCSEEEEEETTTTEEEEEEECS----------S
T ss_pred --------------ccceeeEEeccCCccEeeeECCCCcEEEeee-ecccceeeeecccccEEEEeccC----------C
Confidence 0011223445666788999999999988874 56788999999887522100000 0
Q ss_pred CCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC-------CceeEEEEecCCCCEEE-------ee
Q psy4510 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-------AGAWSVYLYTNRFGVLA-------TG 707 (812)
Q Consensus 642 ~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~-------~~~~~~~~~s~dg~~la-------sg 707 (812)
.............|.+.+....+++ ++...+.+.....+++|+... +.....++|+||+++|+ ++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~ 328 (426)
T d1hzua2 250 TPHPGRGANFVHPKYGPVWSTSHLG-DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA 328 (426)
T ss_dssp CCCCSCCEEEEETTTEEEEEEECTT-TCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSH
T ss_pred cccccceeeeecCCCCceEEeccCC-CceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCc
Confidence 0001112233334444555555555 444444444443332222111 22233456899999999 46
Q ss_pred cCCCeEEEeecCCCCCccccc-----ccccCCCcceeEeEEecCCceeEEee----ccCCceEEeeecCcc
Q psy4510 708 DCKRNIHIWTPREAGAWQVDQ-----KPLVGHTNSVEDLQWSPGEKRVLASC----SVDRSNRIGARRDML 769 (812)
Q Consensus 708 s~dg~i~iwd~~~~~~~~~~~-----~~~~gH~~~V~~l~fs~dg~~~L~s~----s~Dg~i~iWd~~~~~ 769 (812)
+.+++|+|||+.+++....+. ..+..|...|.+++|||||+++++|+ +.|++|+|||.+..+
T Consensus 329 ~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 329 RISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp HHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred ccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 678999999999887522111 12345677899999999999666764 468999999999987
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.86 E-value=6.3e-19 Score=179.02 Aligned_cols=276 Identities=9% Similarity=0.033 Sum_probs=195.9
Q ss_pred EEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC
Q psy4510 287 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT 366 (812)
Q Consensus 287 ~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 366 (812)
..++++.+++|.+||+.+++ ....+. ....+..++|+|+|++++++++.++.|++||+.+ ...+..+ ..+
T Consensus 4 ~yV~~~~~~~v~v~D~~t~~----~~~~i~-~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t---~~~~~~~-~~~- 73 (301)
T d1l0qa2 4 AYIANSESDNISVIDVTSNK----VTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT---NNVIATV-PAG- 73 (301)
T ss_dssp EEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT---TEEEEEE-ECS-
T ss_pred EEEEECCCCEEEEEECCCCe----EEEEEE-CCCCceEEEEeCCCCEEEEEECCCCEEEEEECCC---Cceeeee-ecc-
Confidence 45677889999999999886 334443 3345789999999997778888999999999984 3445555 333
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 367 SDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 367 ~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..+..++|++++. +++++..++.+.+|+.. ....+..+.. ......+.|+|++..+++++..++.+.+|+....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~- 148 (301)
T d1l0qa2 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTT---SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK- 148 (301)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETT---TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-
T ss_pred ccccccccccccccccccccccceeeecccc---cceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeecccc-
Confidence 3578999999998 55566678899999997 3555666554 4567889999998766677777889999999887
Q ss_pred chhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
...........+..+.++|+...++++........+......
T Consensus 149 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 190 (301)
T d1l0qa2 149 ----------------AVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN---------------------- 190 (301)
T ss_dssp ----------------EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----------------------
T ss_pred ----------------ceeeecccCCCceEEEeeccccceeeecccccccccccccce----------------------
Confidence 333444445567888899987666655554443333222110
Q ss_pred CCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE
Q psy4510 526 LPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG 605 (812)
Q Consensus 526 ~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~ 605 (812)
. ..........+..++++++++.++++
T Consensus 191 ---~--------------------------------------------------~~~~~~~~~~~~~~~~~~~g~~~~v~ 217 (301)
T d1l0qa2 191 ---S--------------------------------------------------VIDTVKVEAAPSGIAVNPEGTKAYVT 217 (301)
T ss_dssp ---E--------------------------------------------------EEEEEECSSEEEEEEECTTSSEEEEE
T ss_pred ---e--------------------------------------------------eeecccccCCcceeeccccccccccc
Confidence 0 00111222356778999999988765
Q ss_pred ee-cCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-EecCCCceEEE
Q psy4510 606 VW-GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL-ATGDCKRNIHI 683 (812)
Q Consensus 606 ~~-~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l-as~s~Dg~v~i 683 (812)
+. ..++.|++||+.+++ .+..+.. ...+.+++|+| ++++| ++++.|++|++
T Consensus 218 ~~~~~~~~v~v~D~~t~~-------------------------~~~~~~~-~~~~~~va~sp-dg~~l~va~~~~~~i~v 270 (301)
T d1l0qa2 218 NVDKYFNTVSMIDTGTNK-------------------------ITARIPV-GPDPAGIAVTP-DGKKVYVALSFCNTVSV 270 (301)
T ss_dssp EECSSCCEEEEEETTTTE-------------------------EEEEEEC-CSSEEEEEECT-TSSEEEEEETTTTEEEE
T ss_pred cccceeeeeeeeecCCCe-------------------------EEEEEcC-CCCEEEEEEeC-CCCEEEEEECCCCeEEE
Confidence 32 346789999998876 4444543 34689999999 66654 78888999999
Q ss_pred EecCCCceeEEE
Q psy4510 684 WTPREAGAWSVY 695 (812)
Q Consensus 684 Wd~~~~~~~~~~ 695 (812)
||+.+++++...
T Consensus 271 ~D~~t~~~~~~~ 282 (301)
T d1l0qa2 271 IDTATNTITATM 282 (301)
T ss_dssp EETTTTEEEEEE
T ss_pred EECCCCeEEEEE
Confidence 999988776554
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.83 E-value=5.3e-18 Score=172.04 Aligned_cols=266 Identities=11% Similarity=0.049 Sum_probs=193.5
Q ss_pred EEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcC
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 270 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 270 (812)
.++++.|++|.|||+.+++ ..+.+... ..+..++|+|+|++|+ +++.++.|++||+.++ +.+.++..
T Consensus 5 yV~~~~~~~v~v~D~~t~~----~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~-------~~~~~~~~ 72 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNK----VTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN-------NVIATVPA 72 (301)
T ss_dssp EEEETTTTEEEEEETTTTE----EEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-------EEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCe----EEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC-------ceeeeeec
Confidence 3567789999999999886 33343332 4578999999999885 6668899999999885 67777777
Q ss_pred CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 271 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 271 h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
|. .+..++|++++..+++++..++.+.+|+..++. ....+. +...+.+++|+|++..+++++..++.+.+|+..
T Consensus 73 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~ 146 (301)
T d1l0qa2 73 GS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT----VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (301)
T ss_dssp SS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cc-cccccccccccccccccccccceeeecccccce----eeeecc-ccccceEEEeecCCCeeeeeeccccceeeeecc
Confidence 65 468999999996667778888999999998875 233333 455778999999999877888889999999998
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEE
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFAS 429 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 429 (812)
+. ..+..+ .+...+..+++++++..+++++.+ +.+.+|+.. .......+. ....+..++|++++..++++
T Consensus 147 ~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~g~~~~v~ 217 (301)
T d1l0qa2 147 TK---AVINTV--SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV---TNSVIDTVK-VEAAPSGIAVNPEGTKAYVT 217 (301)
T ss_dssp TT---EEEEEE--ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT---TTEEEEEEE-CSSEEEEEEECTTSSEEEEE
T ss_pred cc---ceeeec--ccCCCceEEEeeccccceeeeccccccccccccc---ceeeeeccc-ccCCcceeeccccccccccc
Confidence 43 333333 334568899999999977766655 667777765 233334443 44567889999998644444
Q ss_pred EE--CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCC
Q psy4510 430 GG--ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTIS 501 (812)
Q Consensus 430 ~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~ 501 (812)
+. .+++|.+||+.+. .+.........+..++|+|++..++++++.++ +.+|+..+
T Consensus 218 ~~~~~~~~v~v~D~~t~-----------------~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t 275 (301)
T d1l0qa2 218 NVDKYFNTVSMIDTGTN-----------------KITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275 (301)
T ss_dssp EECSSCCEEEEEETTTT-----------------EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cccceeeeeeeeecCCC-----------------eEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence 33 2467999999887 33333333457899999999987777877665 55565433
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.81 E-value=3.3e-19 Score=185.06 Aligned_cols=313 Identities=9% Similarity=-0.006 Sum_probs=201.9
Q ss_pred eeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 229 l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
++|++++++|++++.++.|.+||+.++ +.+.++. .|...+.+++|+|+|..+++++..++.|++||+.++..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~-------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC-------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCee
Confidence 578899999999999999999999985 7777776 45667889999999954567777899999999998753
Q ss_pred ceecc--ccccCCCCCEEEEEEcCCCCeEEEEE-----------ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 308 WQVDQ--KPLVGHTNSVEDLQWSPGEKRVLASC-----------SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 308 ~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~-----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
..... .....+...+..++|+|+|+.++++. ..++.+.+|+..+......+... .....+..+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 152 (346)
T d1jmxb_ 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQVYLMRA 152 (346)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSSCCCEEE
T ss_pred eeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEee--eccCceEEEEe
Confidence 11110 11111223467899999999644443 24788999998754433322222 22345666777
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
++++.+++++ +.+.+|++. ..+.+..+..+. ....+.++|++..+++.+..++.+.+++......
T Consensus 153 ~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 217 (346)
T d1jmxb_ 153 ADDGSLYVAG---PDIYKMDVK---TGKYTVALPLRN-WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-------- 217 (346)
T ss_dssp CTTSCEEEES---SSEEEECTT---TCCEEEEECSTT-CCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC---------
T ss_pred cCCCEEEEeC---CcceEEEcc---CCCEEEEEecCC-CccceEEeccccEEEEEecCCCceEeeeeeeeec--------
Confidence 8877766543 468999987 456676666543 3456677887754445555555555554322100
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE-eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST-ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
+.. ..+.+. ....+.++..
T Consensus 218 -------------------------~~~-~~~~~~~~~~~~~~~~~---------------------------------- 237 (346)
T d1jmxb_ 218 -------------------------DDK-QDPATADLLYGYLSVDL---------------------------------- 237 (346)
T ss_dssp --------------------------------CCCEEEEEEEEEET----------------------------------
T ss_pred -------------------------cCc-eeEeeccCCceEEEEEC----------------------------------
Confidence 000 000000 0000001100
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
.. .........++...+..+.+++++.+++.. .++.|
T Consensus 238 ----------------~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v 274 (346)
T d1jmxb_ 238 ----------------KT------------------------GKTHTQEFADLTELYFTGLRSPKDPNQIYG---VLNRL 274 (346)
T ss_dssp ----------------TT------------------------CCEEEEEEEECSSCEEEEEECSSCTTEEEE---EESEE
T ss_pred ----------------CC------------------------CceEEEEeecccceeEEEEEeCCCCEEEEe---cCCeE
Confidence 00 001122344566678888999999988876 35789
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeE
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWS 693 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~ 693 (812)
++||+.+++ .+..+. +...+.+++||| |+++|++++.|+.|++||+.+++.+.
T Consensus 275 ~v~d~~~~~-------------------------~~~~~~-~~~~~~~va~s~-DG~~l~v~~~d~~v~v~D~~t~~~i~ 327 (346)
T d1jmxb_ 275 AKYDLKQRK-------------------------LIKAAN-LDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVK 327 (346)
T ss_dssp EEEETTTTE-------------------------EEEEEE-CSSCCCEEEECS-SSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred EEEECCCCc-------------------------EEEEEc-CCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECccCCEEE
Confidence 999998876 344443 345789999999 78899999999999999998877665
Q ss_pred EE
Q psy4510 694 VY 695 (812)
Q Consensus 694 ~~ 695 (812)
.+
T Consensus 328 ~i 329 (346)
T d1jmxb_ 328 NI 329 (346)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.80 E-value=1.9e-18 Score=179.21 Aligned_cols=297 Identities=10% Similarity=-0.012 Sum_probs=186.4
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
++|++++ .+|++++.+++|.+||+.+++ ....+. .|...+.+++|+|+|+.++++++.++.|++||+.+...
T Consensus 2 ~a~~~~~-~~l~~~~~~~~v~v~D~~t~~----~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~-- 74 (346)
T d1jmxb_ 2 PALKAGH-EYMIVTNYPNNLHVVDVASDT----VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-- 74 (346)
T ss_dssp CCCCTTC-EEEEEEETTTEEEEEETTTTE----EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE--
T ss_pred ccCCCCC-cEEEEEcCCCEEEEEECCCCC----EEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCee--
Confidence 5788988 899999999999999999886 444443 45667889999999998778888999999999985432
Q ss_pred ceeecCC-----cCCCCeEEEEEcCCCCEEEEEe------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEE
Q psy4510 357 CMLTLPN-----AHTSDVNVISWNRTEPLIVSGG------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEW 419 (812)
Q Consensus 357 ~~~~~~~-----~~~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~ 419 (812)
+..+.. .+...+..++|+|+|+++++++ .++.+.+|+....+....+.... ....+..+.+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 152 (346)
T d1jmxb_ 75 -TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRA 152 (346)
T ss_dssp -EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEE
T ss_pred -eeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeee-ccCceEEEEe
Confidence 222211 1223456789999999777664 46788999987533222222222 2334555666
Q ss_pred ccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 420 HPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 420 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
++++ .++++ + +.+.+|++.+.+ .............+.++|++..+.+....++.
T Consensus 153 ~~~~-~~~~~-~--~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 206 (346)
T d1jmxb_ 153 ADDG-SLYVA-G--PDIYKMDVKTGK-----------------YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHE----- 206 (346)
T ss_dssp CTTS-CEEEE-S--SSEEEECTTTCC-----------------EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCE-----
T ss_pred cCCC-EEEEe-C--CcceEEEccCCC-----------------EEEEEecCCCccceEEeccccEEEEEecCCCc-----
Confidence 6664 34443 2 468889987662 22111111222222222322111111000000
Q ss_pred CCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc
Q psy4510 500 ISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM 579 (812)
Q Consensus 500 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (812)
+..
T Consensus 207 -----------------------------------------~~~------------------------------------ 209 (346)
T d1jmxb_ 207 -----------------------------------------FSM------------------------------------ 209 (346)
T ss_dssp -----------------------------------------EEE------------------------------------
T ss_pred -----------------------------------------eEe------------------------------------
Confidence 000
Q ss_pred ceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCce
Q psy4510 580 NSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 659 (812)
Q Consensus 580 ~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V 659 (812)
......+.+....+.++ ..++.+.+|++.++.. ....+..|...+
T Consensus 210 ---------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~ 254 (346)
T d1jmxb_ 210 ---------LYTIARFKDDKQDPATA--DLLYGYLSVDLKTGKT------------------------HTQEFADLTELY 254 (346)
T ss_dssp ---------EEEEEEC-------CCC--EEEEEEEEEETTTCCE------------------------EEEEEEECSSCE
T ss_pred ---------eeeeeeeccCceeEeec--cCCceEEEEECCCCce------------------------EEEEeeccccee
Confidence 00111122233334444 5677899999988752 234456788889
Q ss_pred EEEEeCCCCCCeEEecCCCceEEEEecCCCceeE---------EEEecCCCCEEEeecCCCeEEEeecCCCCC
Q psy4510 660 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWS---------VYLYTNRFGVLATGDCKRNIHIWTPREAGA 723 (812)
Q Consensus 660 ~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~---------~~~~s~dg~~lasgs~dg~i~iwd~~~~~~ 723 (812)
.++.+++ ++..++.+. ++.|++||+.+++... .++|+|||++|++|+.++.|++||+.+++.
T Consensus 255 ~~~~~~~-~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~ 325 (346)
T d1jmxb_ 255 FTGLRSP-KDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 325 (346)
T ss_dssp EEEEECS-SCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred EEEEEeC-CCCEEEEec-CCeEEEEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCE
Confidence 9999999 455666554 4579999999866543 457999999999999999999999998874
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.80 E-value=5.4e-18 Score=174.99 Aligned_cols=299 Identities=8% Similarity=0.008 Sum_probs=181.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccc--cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP- 362 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~- 362 (812)
.+|++++.|++|+|||+.+.+ ....+ ..+...+.+++|+|+|+.++++++.++.|.+||+.+++ .+..+.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~----~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~---~~~~~~~ 74 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE---TLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC---EEEEEEC
T ss_pred eEEEEEcCCCEEEEEECCCCe----EEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCc---EEEEEec
Confidence 579999999999999999876 33333 33455688999999999767888889999999998643 333331
Q ss_pred ---CcCCCCeEEEEEcCCCCEEEEEe------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 363 ---NAHTSDVNVISWNRTEPLIVSGG------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 363 ---~~~~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
..+...+..++|+|++++++++. .++.+.+||.. ....+..+. +...+..++|+|++. ++
T Consensus 75 ~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~-~~~~~~~~~~s~dg~-~l 149 (337)
T d1pbyb_ 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFE-APRQITMLAWARDGS-KL 149 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEE-CCSSCCCEEECTTSS-CE
T ss_pred CCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeecccc---CCeEEEecc-ccCCceEEEEcCCCC-EE
Confidence 11223455789999999887775 35778899997 455555555 445678899999984 66
Q ss_pred EEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCccc
Q psy4510 428 ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQL 507 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (812)
++++ +.+.+||....+ ...............+.|++..+.......+......
T Consensus 150 ~~~~--~~~~~~d~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 202 (337)
T d1pbyb_ 150 YGLG--RDLHVMDPEAGT-----------------LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF-------- 202 (337)
T ss_dssp EEES--SSEEEEETTTTE-----------------EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEE--------
T ss_pred EEEc--CCcceeeeecCc-----------------EEEEeecCCccccceecCCcceeeccccccceeeeee--------
Confidence 6665 457889988763 2222111111111222222211111111111000000
Q ss_pred EEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEeccc
Q psy4510 508 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHR 587 (812)
Q Consensus 508 ~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 587 (812)
.....+....... .....+..+.... ..........+.
T Consensus 203 ------------~~~~~~~~~~~~~------~~~~~~~~~~~~~------------------------~~~~~~~~~~~~ 240 (337)
T d1pbyb_ 203 ------------YTARKDIDPADPT------AYRTGLLTMDLET------------------------GEMAMREVRIMD 240 (337)
T ss_dssp ------------EEEBTTSCTTSGG------GEEEEEEEEETTT------------------------CCEEEEEEEECS
T ss_pred ------------eeeeeccceeeec------ccCccEEEEEcCC------------------------CcEEEEEecCCC
Confidence 0000000000000 0000000111000 011123345566
Q ss_pred ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCC
Q psy4510 588 GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 667 (812)
Q Consensus 588 ~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~ 667 (812)
..+..+++++++.+++.+ ++.|++||+.++. .+..+ .+...+.+++|+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~~~-------------------------~~~~~-~~~~~~~~~~~s~- 289 (337)
T d1pbyb_ 241 VFYFSTAVNPAKTRAFGA----YNVLESFDLEKNA-------------------------SIKRV-PLPHSYYSVNVST- 289 (337)
T ss_dssp SCEEEEEECTTSSEEEEE----ESEEEEEETTTTE-------------------------EEEEE-ECSSCCCEEEECT-
T ss_pred cceEEEEecccceEEEEc----cccEEEEECCCCc-------------------------EEEEE-cCCCCEEEEEECC-
Confidence 778888999999887665 5899999999886 34444 3556789999999
Q ss_pred CCCeEEecCCCceEEEEecCCCceeEEEE
Q psy4510 668 EPGVLATGDCKRNIHIWTPREAGAWSVYL 696 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~~~~~~~~~ 696 (812)
++++|++++.|++|++||+.+++.+..+-
T Consensus 290 dG~~l~v~~~~~~i~v~D~~t~~~v~~i~ 318 (337)
T d1pbyb_ 290 DGSTVWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp TSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence 78888888888889888888776665543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.78 E-value=5.5e-17 Score=167.26 Aligned_cols=284 Identities=9% Similarity=-0.046 Sum_probs=181.2
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
.+|++++.|++|++||+.+ ...+..+.. .+...+.+++|+|+|+++ ++++.++.|.+||+. +++.+..+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s---~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~---t~~~~~~~~~~ 75 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEK---MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV---TGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTT---TEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT---TCCEEEEEECC
T ss_pred eEEEEEcCCCEEEEEECCC---CeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECC---CCcEEEEEecC
Confidence 3699999999999999985 344444422 344567899999999966 567789999999998 46677766655
Q ss_pred CC-----CEEEEEEccCCCcEEEEEE------------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCce
Q psy4510 411 TA-----PVTTVEWHPTESSTFASGG------------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEI 473 (812)
Q Consensus 411 ~~-----~v~~v~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 473 (812)
.. .+..++|+|++. .+++++ .+..+.+||.... ...........+
T Consensus 76 ~~~~~~~~~~~v~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----------------~~~~~~~~~~~~ 137 (337)
T d1pbyb_ 76 TPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETL-----------------SRRKAFEAPRQI 137 (337)
T ss_dssp BTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTT-----------------EEEEEEECCSSC
T ss_pred CCcccccceeeEEEcCCCc-EEEEeecCCcceeeeccccccceeeccccCC-----------------eEEEeccccCCc
Confidence 33 345789999975 555554 3567888998877 344444445678
Q ss_pred eEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccc
Q psy4510 474 KELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTE 553 (812)
Q Consensus 474 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~ 553 (812)
..++|+|++..++++. ....+|+........ ............+.|+..
T Consensus 138 ~~~~~s~dg~~l~~~~--~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------------------- 186 (337)
T d1pbyb_ 138 TMLAWARDGSKLYGLG--RDLHVMDPEAGTLVE---DKPIQSWEAETYAQPDVL-------------------------- 186 (337)
T ss_dssp CCEEECTTSSCEEEES--SSEEEEETTTTEEEE---EECSTTTTTTTBCCCBCC--------------------------
T ss_pred eEEEEcCCCCEEEEEc--CCcceeeeecCcEEE---EeecCCccccceecCCcc--------------------------
Confidence 8899999987665543 334444432221110 000000001111111100
Q ss_pred cccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccc
Q psy4510 554 EDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAE 633 (812)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~ 633 (812)
.++ ......+...........+......+ ..++.+.+|++.++..
T Consensus 187 -----~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------- 231 (337)
T d1pbyb_ 187 -----AVW------------------NQHESSGVMATPFYTARKDIDPADPT--AYRTGLLTMDLETGEM---------- 231 (337)
T ss_dssp -----CCC------------------CCCTTTTEEEEEEEEEBTTSCTTSGG--GEEEEEEEEETTTCCE----------
T ss_pred -----eee------------------ccccccceeeeeeeeeeeccceeeec--ccCccEEEEEcCCCcE----------
Confidence 000 00000011112222233334334444 5677899999987752
Q ss_pred cccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeE---------EEEecCCCCEE
Q psy4510 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWS---------VYLYTNRFGVL 704 (812)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~---------~~~~s~dg~~l 704 (812)
....+..|...+..++++| ++.+++++ ++.|++||+.+++.+. .++|+|||++|
T Consensus 232 --------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l 294 (337)
T d1pbyb_ 232 --------------AMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTV 294 (337)
T ss_dssp --------------EEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEE
T ss_pred --------------EEEEecCCCcceEEEEecc-cceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEE
Confidence 2334556777889999999 67777665 5899999999866543 45799999999
Q ss_pred EeecCCCeEEEeecCCCCC
Q psy4510 705 ATGDCKRNIHIWTPREAGA 723 (812)
Q Consensus 705 asgs~dg~i~iwd~~~~~~ 723 (812)
++|+.+++|+|||..+++.
T Consensus 295 ~v~~~~~~i~v~D~~t~~~ 313 (337)
T d1pbyb_ 295 WLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EEESBSSEEEEEETTTCCE
T ss_pred EEEeCCCcEEEEECCCCcE
Confidence 9999999999999999874
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.78 E-value=4.2e-16 Score=163.39 Aligned_cols=238 Identities=7% Similarity=-0.090 Sum_probs=156.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEe-----cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee------
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD------ 242 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~-----~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~------ 242 (812)
++.+++..++++| +|+.++.. +..+.|.+||..+++ .+..+..+..+ .++|+|||++|++++
T Consensus 18 ~~~~p~~~~a~sp-dg~~~~~~~~~~~~~~~~v~v~D~~tg~----~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~ 90 (373)
T d2madh_ 18 AADGPTNDEAPGA-DGRRSYINLPAHHSAIIQQWVLDAGSGS----ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRI 90 (373)
T ss_pred cCCCCccccccCC-CCCEEEEEcccccCCCceEEEEECCCCC----EEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcc
Confidence 6788899999999 99988764 344679999998887 44455555544 799999999998875
Q ss_pred ----CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcE-------EEEEecCCCCCEEE-EEeCCCcEEEEeCCCCCccee
Q psy4510 243 ----DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG-------FAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQV 310 (812)
Q Consensus 243 ----~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v-------~~l~~sp~~~~~l~-sg~~dg~i~vwd~~~~~~~~~ 310 (812)
.++.|.+||..++ +++..+..+.... ..+.|++++..+++ ....++.+.+|+.....
T Consensus 91 ~~~~~~~~v~v~D~~t~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~---- 159 (373)
T d2madh_ 91 AKGKRTDYVEVFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS---- 159 (373)
T ss_pred cccccceEEEEEECCCC-------cEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe----
Confidence 3578999999986 5666666555443 34678888743332 22445678888877654
Q ss_pred ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC--CcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 311 DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP--NAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 311 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
...+.....++.++|+++.++++.+.|+.+.+|+.............. .........+.+.+++ .++..+.++
T Consensus 160 ----~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 234 (373)
T d2madh_ 160 ----DDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSG 234 (373)
T ss_pred ----EEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCc-eEEEecCCc
Confidence 123444567889999999888999999999999987543322221111 1222234455566655 445566788
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
.+.+|+..... ...+.....+......+.+.|.. ...++.+.|+..
T Consensus 235 ~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~ 280 (373)
T d2madh_ 235 KILQADISAAG-ATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDG 280 (373)
T ss_pred eEEEEEcCCCe-EEEEEeeccccCcEEeeeeccCc-ceeeEEecCCCe
Confidence 99999987421 12233344455556666666654 344555555543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.76 E-value=1.4e-15 Score=159.45 Aligned_cols=199 Identities=9% Similarity=-0.062 Sum_probs=135.4
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEee-----CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVD-----DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD- 292 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~- 292 (812)
...+..++.+++++|+++.++... ..+.+.+||..++ +.+.++..+... .++|+|+| .+|++++
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg-------~~~~~~~~~~~~--~~a~SpDG-~~l~va~~ 85 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG-------SILGHVNGGFLP--NPVAAHSG-SEFALAST 85 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC-------CEEEEEeCCCCc--cEEEcCCC-CEEEEEee
Confidence 446888999999999999987653 3456889998875 777777766544 79999999 6666653
Q ss_pred ---------CCCcEEEEeCCCCCcceeccccccCCCCC-------EEEEEEcCCCCeEEEEE-ECCCeEEEEECCCCCcc
Q psy4510 293 ---------CKRNIHIWTPREAGAWQVDQKPLVGHTNS-------VEDLQWSPGEKRVLASC-SVDLSIRIWDTRVINTK 355 (812)
Q Consensus 293 ---------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~-------v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~ 355 (812)
.++.|.+||+.+++ ....+..+... ...+.|+++++.+++.. ..++.+.+|+.....
T Consensus 86 ~~~~~~~~~~~~~v~v~D~~t~~----~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-- 159 (373)
T d2madh_ 86 SFSRIAKGKRTDYVEVFDPVTFL----PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS-- 159 (373)
T ss_pred cCCcccccccceEEEEEECCCCc----EEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe--
Confidence 46789999999887 33333333322 24578888888643333 345678888876321
Q ss_pred cceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEccc------CCCCEEEEEEccCCCcEEE
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKH------HTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------h~~~v~~v~~~p~~~~~l~ 428 (812)
.. .+.....++.++|+++ .+++.+.||.+.+|+... ......... +......+.+.++ ..++
T Consensus 160 -~~-----~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 228 (373)
T d2madh_ 160 -DD-----QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAG---GAAGAGLVGAMLTAAQNLLTQPAQANKS--GRIV 228 (373)
T ss_pred -EE-----EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCC---ceeeEEEeeeccccCccceeeeEEECCC--ceEE
Confidence 11 2334467889999997 667888999999999874 333333222 1222344555554 3566
Q ss_pred EEECCCCEEEEEcCCC
Q psy4510 429 SGGADDQIALWDLAVE 444 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~ 444 (812)
..+.++.+.+|+....
T Consensus 229 ~~~~~~~v~~~~~~~~ 244 (373)
T d2madh_ 229 WPVYSGKILQADISAA 244 (373)
T ss_pred EecCCceEEEEEcCCC
Confidence 6777889999998766
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=2.1e-16 Score=162.67 Aligned_cols=307 Identities=11% Similarity=0.121 Sum_probs=182.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH 365 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 365 (812)
..+++++.+++|++|++...+... ......|.+.+..|+|+|+|+.+++++..|+.|++|++............ ..+
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l~--~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~-~~~ 81 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGALT--LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE-SAL 81 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEE--EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE-EEC
T ss_pred EEEEECCCCCcEEEEEEcCCCCeE--EEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeee-ccc
Confidence 356888899999999998665211 22234578899999999999976677777999999999754332222222 334
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 366 TSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
...+..++|+|+|++|++++. ++.|.+|+..... .........+...+.++.++|++..++.....+..|.+|+....
T Consensus 82 ~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~ 160 (333)
T d1ri6a_ 82 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 160 (333)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-EEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCCceEEEEcCCCCEEeecccCCCceeeecccccc-ceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccC
Confidence 556778999999998887774 6789999886421 12223344567778899999998544444445667999998765
Q ss_pred CchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcC
Q psy4510 445 RDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHP 524 (812)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p 524 (812)
..... . ...............++|++++...+.+....+................. ..+...+
T Consensus 161 ~~~~~---------~-~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~ 223 (333)
T d1ri6a_ 161 GHLVA---------Q-DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV-------QTLDMMP 223 (333)
T ss_dssp SCEEE---------E-EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE-------EEEECSC
T ss_pred Cccee---------e-eceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeee-------eeeeeee
Confidence 32100 0 00001111122456777777765555444433322221111110000000 0000000
Q ss_pred CCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEE
Q psy4510 525 QLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLA 604 (812)
Q Consensus 525 ~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~ 604 (812)
. ..........++++++++++++
T Consensus 224 ~---------------------------------------------------------~~~~~~~~~~~~~s~d~~~~~~ 246 (333)
T d1ri6a_ 224 E---------------------------------------------------------NFSDTRWAADIHITPDGRHLYA 246 (333)
T ss_dssp T---------------------------------------------------------TCCSCCCEEEEEECTTSSEEEE
T ss_pred c---------------------------------------------------------CCCccccceeEEEecccCceee
Confidence 0 0011234567889999998877
Q ss_pred EeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEe-cCCCceEEE
Q psy4510 605 GVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT-GDCKRNIHI 683 (812)
Q Consensus 605 ~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las-~s~Dg~v~i 683 (812)
+. ..++.+.+|++...... ..+.....+...+.+++|+| ++++|++ ++.+++|++
T Consensus 247 ~~-~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~p~~~a~sp-DGk~l~va~~~~~~v~v 302 (333)
T d1ri6a_ 247 CD-RTASLITVFSVSEDGSV----------------------LSKEGFQPTETQPRGFNVDH-SGKYLIAAGQKSHHISV 302 (333)
T ss_dssp EE-TTTTEEEEEEECTTSCC----------------------EEEEEEEECSSSCCCEEECT-TSSEEEEECTTTCEEEE
T ss_pred ec-ccCCeEEEEEEcCCCCE----------------------EEEEEEeCCCCCeeEEEEeC-CCCEEEEEECCCCeEEE
Confidence 63 67889999998765411 01122223445678899999 6776554 456789999
Q ss_pred Eec--CCCceeEE
Q psy4510 684 WTP--REAGAWSV 694 (812)
Q Consensus 684 Wd~--~~~~~~~~ 694 (812)
|++ ++|++..+
T Consensus 303 ~~id~~tG~l~~~ 315 (333)
T d1ri6a_ 303 YEIVGEQGLLHEK 315 (333)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 855 45555433
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=1.7e-15 Score=155.76 Aligned_cols=283 Identities=11% Similarity=0.108 Sum_probs=188.7
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEE-
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSF- 268 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~- 268 (812)
.+++++.|++|+||+++..... .+.....|.+.|..|+|||||++|++++ .++.|++|++... .....+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l--~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~-------~~~~~~~ 76 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGAL--TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD-------DGALTFA 76 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCE--EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT-------TCCEEEE
T ss_pred EEEECCCCCcEEEEEEcCCCCe--EEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCC-------CCcEEEe
Confidence 4577888999999999865422 2223346889999999999999996555 5899999999864 222222
Q ss_pred --cCCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 269 --SGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 269 --~~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
..+...+..++|+|+| ++|++++ .++.|.+|+....... .......+...+.++.++|+++.+++....+..|.
T Consensus 77 ~~~~~~~~p~~l~~spDg-~~l~v~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~ 153 (333)
T d1ri6a_ 77 AESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPV--GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153 (333)
T ss_dssp EEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEE--EEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred eecccCCCceEEEEcCCC-CEEeecccCCCceeeeccccccce--ecccccCCCccceEEEeeecceeeeccccccceee
Confidence 2344567789999999 6666665 5778999988765421 22334456677889999999997666666677899
Q ss_pred EEECCCCCcccce--eecCCcCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCC-CceEEcc------cCCCCEE
Q psy4510 346 IWDTRVINTKSCM--LTLPNAHTSDVNVISWNRTEPLIVS-GGDDGCIHVWDLRRFKKG-SSVATFK------HHTAPVT 415 (812)
Q Consensus 346 iwd~~~~~~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~-~~~~~~~------~h~~~v~ 415 (812)
+|+.......... .............++|++++.+++. ....+...+|+....... ....... .......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T d1ri6a_ 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 233 (333)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccce
Confidence 9998753322111 1112334566789999999986554 445677888887532111 1111111 1234567
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-e
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-F 494 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~ 494 (812)
.+++++++..+++++..++.+.+|++...... ............+..++|+|+++.+++++..++ +
T Consensus 234 ~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v 300 (333)
T d1ri6a_ 234 DIHITPDGRHLYACDRTASLITVFSVSEDGSV-------------LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHI 300 (333)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCC-------------EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEE
T ss_pred eEEEecccCceeeecccCCeEEEEEEcCCCCE-------------EEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeE
Confidence 88999998766677777889999998765321 022222333346788999999987777766544 5
Q ss_pred EEEE
Q psy4510 495 NIFR 498 (812)
Q Consensus 495 ~~~~ 498 (812)
.+|.
T Consensus 301 ~v~~ 304 (333)
T d1ri6a_ 301 SVYE 304 (333)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.64 E-value=2.1e-15 Score=156.77 Aligned_cols=305 Identities=11% Similarity=-0.009 Sum_probs=169.0
Q ss_pred EEEcCCCCeEEEEE----ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE----------eCCCcE
Q psy4510 325 LQWSPGEKRVLASC----SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG----------GDDGCI 390 (812)
Q Consensus 325 ~~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg----------~~dg~i 390 (812)
.+.+|+++.++++. ..++.|.+||..++ ..+.++ ..+ ....++|+|+|++|++. ..++.|
T Consensus 7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg---~~~~~~-~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RVIGMI-DGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT---EEEEEE-EEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EeeCCCCCEEEEEecccCCCcCeEEEEECCCC---cEEEEE-ECC--CCCceEEcCCCCEEEEEeCCCccccccCCCCEE
Confidence 35689999765553 34567999999854 344444 233 33479999999966653 457899
Q ss_pred EEEecCCCCCCCceEEcccCCC-------CEEEEEEccCCCcEEEEEE--CCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTA-------PVTTVEWHPTESSTFASGG--ADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~-------~v~~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
++||+.+ ++.+..+..+.. ....++|+|++. .++.++ .+..+.+|+....+.
T Consensus 81 ~v~D~~t---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~~~v~~~~~~~~~~~~~~~~~~~--------------- 141 (355)
T d2bbkh_ 81 EVFDPVT---LLPTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAF--------------- 141 (355)
T ss_dssp EEECTTT---CCEEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEE---------------
T ss_pred EEEECCC---CCEEEEEecCCcceeecCCCCceEEEecCCC-eeEEecCCCCceeeeeecCCCcE---------------
Confidence 9999984 556665543322 234678999985 554443 466789999987632
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
........... ..+..+.. .+.+++++...++.........+
T Consensus 142 --~~~~~~~~~~~---~~~~~~~~---------------------------------~~~~~~dg~~~~v~~~~~~~~~~ 183 (355)
T d2bbkh_ 142 --KRMLDVPDCYH---IFPTAPDT---------------------------------FFMHCRDGSLAKVAFGTEGTPEI 183 (355)
T ss_dssp --EEEEECCSEEE---EEEEETTE---------------------------------EEEEETTSCEEEEECCSSSCCEE
T ss_pred --eeEEecCCcce---EeecCCcc---------------------------------eEEEcCCCCEEEEEecCCCeEEE
Confidence 11111111000 00111111 12223332111111111110000
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
.. ... ....+...+....+++++..++.+ +.++.+++|++..+
T Consensus 184 ~~--~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~ 226 (355)
T d2bbkh_ 184 TH--TEV---------------------------------FHPEDEFLINHPAYSQKAGRLVWP--TYTGKIHQIDLSSG 226 (355)
T ss_dssp EE--CCC---------------------------------CSCTTSCBCSCCEEETTTTEEEEE--BTTSEEEEEECTTS
T ss_pred Ee--ccc---------------------------------ccceecceeeeccccCCCCeEEEe--cCCCeEEEEecCCC
Confidence 00 000 001112233445677888888887 78999999999887
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCC
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRF 701 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg 701 (812)
... .+....+|......+.+.| ++...++.+.|+...+|.. .++
T Consensus 227 ~~~-----------------------~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~d~~~~~~~~------------~~~ 270 (355)
T d2bbkh_ 227 DAK-----------------------FLPAVEALTEAERADGWRP-GGWQQVAYHRALDRIYLLV------------DQR 270 (355)
T ss_dssp SCE-----------------------ECCCEESSCHHHHHTTEEE-CSSSCEEEETTTTEEEEEE------------EEC
T ss_pred cEE-----------------------EEeccCCcccceEeeeeec-cceEEEEEeCCCCeEEEEe------------ccC
Confidence 522 1222334443444444555 3434444444443333321 111
Q ss_pred CEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce-eEEeeccCCceEEeeecCcce
Q psy4510 702 GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR-VLASCSVDRSNRIGARRDMLY 770 (812)
Q Consensus 702 ~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~-~L~s~s~Dg~i~iWd~~~~~~ 770 (812)
...+.......|.+||..+++. +..+. +...+.+++|||||++ ++++++.|++|+|||+++++.
T Consensus 271 ~~~~~~~~~~~v~v~d~~t~~~----~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~ 335 (355)
T d2bbkh_ 271 DEWRHKTASRFVVVLDAKTGER----LAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 335 (355)
T ss_dssp CTTCTTSCEEEEEEEETTTCCE----EEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CceeecCCCCeEEEEeCCCCcE----EEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCE
Confidence 1122223345789999988873 33443 3356899999999974 456788899999999999983
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.62 E-value=7.8e-15 Score=152.31 Aligned_cols=122 Identities=6% Similarity=-0.077 Sum_probs=78.3
Q ss_pred EEecCCCCCEEEEE-----eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE---------ECCCe
Q psy4510 278 MDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC---------SVDLS 343 (812)
Q Consensus 278 l~~sp~~~~~l~sg-----~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~---------~~dg~ 343 (812)
.+.+|++ .++++. ..++.|.+||..+++ ....+..+. ...++|+|+|+.++++. ..|+.
T Consensus 7 ~a~spdg-~~~~v~~~~~~~~~~~v~v~D~~tg~----~~~~~~~g~--~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~ 79 (355)
T d2bbkh_ 7 EAPAPDA-RRVYVNDPAHFAAVTQQFVIDGEAGR----VIGMIDGGF--LPNPVVADDGSFIAHASTVFSRIARGERTDY 79 (355)
T ss_dssp CCCCCCT-TEEEEEECGGGCSSEEEEEEETTTTE----EEEEEEECS--SCEEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred EeeCCCC-CEEEEEecccCCCcCeEEEEECCCCc----EEEEEECCC--CCceEEcCCCCEEEEEeCCCccccccCCCCE
Confidence 3568998 454443 235679999999886 344444443 34799999999754442 45789
Q ss_pred EEEEECCCCCcccceeecCCc----CCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCCCceEEcccC
Q psy4510 344 IRIWDTRVINTKSCMLTLPNA----HTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~----~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
|++||+.+......+... .. .......++|++++++++.+. .+..+.+|+.. .+..+..+..+
T Consensus 80 v~v~D~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~ 148 (355)
T d2bbkh_ 80 VEVFDPVTLLPTADIELP-DAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE---GKAFKRMLDVP 148 (355)
T ss_dssp EEEECTTTCCEEEEEEET-TCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT---TTEEEEEEECC
T ss_pred EEEEECCCCCEEEEEecC-CcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecC---CCcEeeEEecC
Confidence 999999865432222111 11 123345689999999766654 56789999997 45555555543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.59 E-value=4.3e-13 Score=144.89 Aligned_cols=155 Identities=14% Similarity=0.157 Sum_probs=111.1
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCccc-ccccccCCCCCCeeeeeEcCCCCcEEEeeC---------CCceEEe
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ-VDQKPLGGHTNSAEDLQWSDLKTALQTVDD---------PFQLAEH 250 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---------d~~i~vw 250 (812)
.+.|.+ ++.++... ++.+.+||+.+++... .....+..|...|.++.|||||++|+.++. ++.+.+|
T Consensus 21 ~~~W~~-d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~ 97 (470)
T d2bgra1 21 SLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (470)
T ss_dssp CCEECS-SSEEEEES--SSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCEeCC-CCEEEEEc--CCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence 377999 88888754 6789999999987532 233467788899999999999999998753 4678899
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc-----cccC--------
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK-----PLVG-------- 317 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-----~~~~-------- 317 (812)
|+.++ .+..+..|...+..+.|||+| ..||.. .++.+++|+..++........ .+.+
T Consensus 98 d~~~~--------~~~~l~~~~~~~~~~~~SPDG-~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~ 167 (470)
T d2bgra1 98 DLNKR--------QLITEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (470)
T ss_dssp ETTTT--------EECCSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ECCCC--------cccccccCCccccccccccCc-ceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeee
Confidence 99884 345577888999999999999 666665 468899999988763211100 0011
Q ss_pred -CCCCEEEEEEcCCCCeEEEEEECC-CeEEEEEC
Q psy4510 318 -HTNSVEDLQWSPGEKRVLASCSVD-LSIRIWDT 349 (812)
Q Consensus 318 -h~~~v~~~~~~p~~~~~l~s~~~d-g~i~iwd~ 349 (812)
..+....+.|+|+|+. |+....| ..+..|.+
T Consensus 168 ~~~~~~~~~~wSPDGk~-ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 168 EVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEY 200 (470)
T ss_dssp HTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEE
T ss_pred eecCCccccEECCCCCc-cceeEecCCcCceEEE
Confidence 2234566889999996 6665544 33555554
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.46 E-value=7.1e-14 Score=144.04 Aligned_cols=146 Identities=11% Similarity=-0.014 Sum_probs=102.2
Q ss_pred EEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe-
Q psy4510 593 VRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV- 671 (812)
Q Consensus 593 l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~- 671 (812)
++++|+|+++.++ .++.+.++...... .+..+.... ....++++| |+++
T Consensus 223 ~~~~~dGk~~~v~---~~~v~vvd~~~~~~-------------------------v~~~IPvgk-sPhGv~vSP-DGkyl 272 (441)
T d1qnia2 223 AAAVKAGNFKTIG---DSKVPVVDGRGESE-------------------------FTRYIPVPK-NPHGLNTSP-DGKYF 272 (441)
T ss_dssp HHHHHTTCCBCCT---TCCCCEEECSSSCS-------------------------SEEEECCBS-SCCCEEECT-TSCEE
T ss_pred EEEecCCCEEEeC---CCCcEEEEcccCCc-------------------------eEEEEeCCC-CccCceECC-CCCEE
Confidence 3567889877664 56777777665543 444555443 357899999 6665
Q ss_pred EEecCCCceEEEEecCCC-----------ce----------eEEEEecCCCCEEEeecCCCeEEEeecCCC------CCc
Q psy4510 672 LATGDCKRNIHIWTPREA-----------GA----------WSVYLYTNRFGVLATGDCKRNIHIWTPREA------GAW 724 (812)
Q Consensus 672 las~s~Dg~v~iWd~~~~-----------~~----------~~~~~~s~dg~~lasgs~dg~i~iwd~~~~------~~~ 724 (812)
++++..+++|.+||+++. .. .--..|.++|..+.+...|..|..|++... ...
T Consensus 273 ~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~ 352 (441)
T d1qnia2 273 IANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRV 352 (441)
T ss_dssp EEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCC
T ss_pred EEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCC
Confidence 577889999999999761 00 112358999999999999999999997421 110
Q ss_pred ccc-----cccccCCCcceeEeEEecCCceeEEee---ccCCce----------EEeeecCcc
Q psy4510 725 QVD-----QKPLVGHTNSVEDLQWSPGEKRVLASC---SVDRSN----------RIGARRDML 769 (812)
Q Consensus 725 ~~~-----~~~~~gH~~~V~~l~fs~dg~~~L~s~---s~Dg~i----------~iWd~~~~~ 769 (812)
... +....||...+.+.+|+|||+ ||+|+ |.|+.+ .+.||...+
T Consensus 353 ~~v~~~~~v~y~~GH~~~~~~~t~~pdGk-~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~~~~ 414 (441)
T d1qnia2 353 NYIRQKLDVQYQPGHNHASLTESRDADGK-WLVVLSKFSKDRFLPVGPLHPENDQLIDISGEE 414 (441)
T ss_dssp CCEEEEEECSSCEEEEEETTTTSTTCCCC-EEEEEESCCGGGSCCCSSSCCEEEEEEECSSSS
T ss_pred ceeEeccccccCCCCCccccccccCCCCc-EEEecCccccccCcCCCCCCCccceeEEecCCe
Confidence 001 222379999999999999999 89999 777653 556666444
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.35 E-value=9.1e-12 Score=129.45 Aligned_cols=157 Identities=10% Similarity=-0.024 Sum_probs=97.5
Q ss_pred CcEEEEEecCCCCCEEEE--EeCCCc--EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE---------E
Q psy4510 273 TEGFAMDWSSTEPGVLAT--GDCKRN--IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC---------S 339 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~s--g~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~---------~ 339 (812)
+....++..+++....++ ...++. |.+||..++. .......+... .++|+|+++.+.++. +
T Consensus 20 g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~----~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~ 93 (368)
T d1mdah_ 20 GSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGV----TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGK 93 (368)
T ss_dssp CCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTE----EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSS
T ss_pred CCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCc----EEEEEeCCCCC--cceECCCCCEEEEEcccCccccccc
Confidence 334445566776433333 344555 6666877765 33444444433 589999999644432 2
Q ss_pred CCCeEEEEECCCCCcccceeecC--C----cCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLP--N----AHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~--~----~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
.|+.|++||..+... +..+. . ........++|+|+|++|+++. .++.+.+||+. ..+.+..+..+..
T Consensus 94 ~d~~v~v~D~~t~~~---~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~---~~~~~~~~~~~~~ 167 (368)
T d1mdah_ 94 RTDYVEVFDPVTFLP---IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVP---GASDDQLTKSASC 167 (368)
T ss_dssp EEEEEEEECTTTCCE---EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEET---TTEEEEEEECSSC
T ss_pred cCCeEEEEECCCCcE---eeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECC---CCcEeEEeeccCc
Confidence 477899999985432 32221 0 1122234689999999776665 67999999998 4566666655543
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.. +.|.+...+++.+.||.+.++++....
T Consensus 168 ~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~ 196 (368)
T d1mdah_ 168 FH----IHPGAAATHYLGSCPASLAASDLAAAP 196 (368)
T ss_dssp CC----CEEEETTEEECCCCTTSCEEEECCSSC
T ss_pred ce----EccCCCceEEEEcCCCCEEEEEecCCc
Confidence 32 233344677788889999999887653
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.30 E-value=4.4e-11 Score=124.11 Aligned_cols=245 Identities=9% Similarity=-0.027 Sum_probs=154.0
Q ss_pred EEEeCCCCCCeEEEec----------CCCcEEEEccCCCCcccccccc---cCCCCCCeeeeeEcCCCCcEEEee-CCCc
Q psy4510 181 AMDWSSTEPGVLATGD----------CKRNIHIWTPREAGAWQVDQKP---LGGHTNSAEDLQWSDLKTALQTVD-DPFQ 246 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~----------~dg~v~iwd~~~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~l~s~~-~d~~ 246 (812)
.++|+| +|+.|++++ .|+.|++||..+.+........ ..........++|+|||++|+++. .++.
T Consensus 69 ~~a~sp-Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~ 147 (368)
T d1mdah_ 69 LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSA 147 (368)
T ss_dssp EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSC
T ss_pred cceECC-CCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCe
Confidence 478999 999888753 4778999999987732211100 111122345799999999998876 5799
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce--eccccccCCCCCEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ--VDQKPLVGHTNSVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~--~~~~~~~~h~~~v~~ 324 (812)
+.+||+.++ +.+..+..+... .+.|.+...++..+.||.+.+|++....... .....+..+...+..
T Consensus 148 v~~~d~~~~-------~~~~~~~~~~~~----~~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T d1mdah_ 148 AAGLSVPGA-------SDDQLTKSASCF----HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp EEEEEETTT-------EEEEEEECSSCC----CCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEEECCCC-------cEeEEeeccCcc----eEccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceee
Confidence 999999885 555555554432 2233444667777788888888876654311 112233445556667
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC---------CcCCCCeEEEEEcCCCCEEEEEeCC--------
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP---------NAHTSDVNVISWNRTEPLIVSGGDD-------- 387 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~~~~~l~sg~~d-------- 387 (812)
..+.+++. .+.+ ..+.+.+++....... .+.... .........+++++++..++....+
T Consensus 217 ~~~~~~g~-~~~~--~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~ 292 (368)
T d1mdah_ 217 AQANYPGM-LVWA--VASSILQGDIPAAGAT-MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292 (368)
T ss_dssp EEETTTTE-EEEC--BSSCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred cccccCcE-EEEe--cCCCEEEEeecCCceE-EEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecC
Confidence 77888775 3333 3456666666532111 000000 0111223457888988855544322
Q ss_pred -CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCc-EEEEEECCCCEEEEEcCCCC
Q psy4510 388 -GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESS-TFASGGADDQIALWDLAVER 445 (812)
Q Consensus 388 -g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~s~~~dg~v~iwd~~~~~ 445 (812)
..|.+||.. +++.+..+. +...+.+++|+|++.. +++++..++.|++||..+++
T Consensus 293 ~~~v~v~D~~---t~~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk 348 (368)
T d1mdah_ 293 AENTSSVTAS---VGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEEEESS---SCCEEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CceEEEEECC---CCcEeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 358899997 456666665 3456889999999865 45667778999999999884
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.27 E-value=2.8e-10 Score=122.35 Aligned_cols=294 Identities=10% Similarity=0.028 Sum_probs=162.1
Q ss_pred CCCCCceEEEEeCCCCCCeEEEec---------CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 173 SGHLTEGFAMDWSSTEPGVLATGD---------CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~~lat~~---------~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
.+|...|.+++||| ||++||.++ .++.+.|||+.+++ ...+..|...+..+.|||||++||.. .
T Consensus 58 ~~~~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-----~~~l~~~~~~~~~~~~SPDG~~ia~~-~ 130 (470)
T d2bgra1 58 DEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHKLAYV-W 130 (470)
T ss_dssp TTSSSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTTCEEEE-E
T ss_pred hhccCccceeEECC-CCCEEEEEECCcceeeeccCceEEEEECCCCc-----ccccccCCccccccccccCcceeeEe-e
Confidence 36777899999999 999999874 35778999999874 45688899999999999999999986 5
Q ss_pred CCceEEeeCCCCCCCCCC--CCCceEEcC---------CCCcEEEEEecCCCCCEEEEEeCCCc-EEEEeC---------
Q psy4510 244 PFQLAEHNKKRGKGPGIP--TPPLFSFSG---------HLTEGFAMDWSSTEPGVLATGDCKRN-IHIWTP--------- 302 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~--~~~~~~~~~---------h~~~v~~l~~sp~~~~~l~sg~~dg~-i~vwd~--------- 302 (812)
++.+.+|+..++...... ..+-..+.+ +.+...++.|||+| ..|+....|.+ +..|.+
T Consensus 131 ~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDG-k~ia~~~~d~~~v~~~~~~~~~~~~~~ 209 (470)
T d2bgra1 131 NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQ 209 (470)
T ss_dssp TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCS
T ss_pred cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCC-CccceeEecCCcCceEEEEeeccCCCC
Confidence 678999998876211000 000011111 12234568899999 67777654432 444332
Q ss_pred --------------------------CCCCcceecc-------ccccCCCCCEEEEEEcCCCCeEEEEEECCC---eEEE
Q psy4510 303 --------------------------REAGAWQVDQ-------KPLVGHTNSVEDLQWSPGEKRVLASCSVDL---SIRI 346 (812)
Q Consensus 303 --------------------------~~~~~~~~~~-------~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg---~i~i 346 (812)
..+....... .........+..+.|.+++..++......+ .+.+
T Consensus 210 ~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~ 289 (470)
T d2bgra1 210 YPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDI 289 (470)
T ss_dssp SCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEE
T ss_pred CCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEE
Confidence 1111000000 000112234567888888873333333332 2344
Q ss_pred E--ECCCCCccccee----e-c----CCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 347 W--DTRVINTKSCML----T-L----PNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 347 w--d~~~~~~~~~~~----~-~----~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
+ |..++....... . . ...+.... ..|.+++. +++....+|..+||.... .+.....+..+...
T Consensus 290 ~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~s~~dg~~~ly~~~~--~g~~~~~lt~g~~~ 365 (470)
T d2bgra1 290 CDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSE--PHFTLDGNSFYKIISNEEGYRHICYFQI--DKKDCTFITKGTWE 365 (470)
T ss_dssp EEEETTTTEEEECGGGCEEEECSSSCSSSSSCCC--CEECTTSSEEEEEEECTTSCEEEEEEET--TCSCCEESCCSSSC
T ss_pred EEecCCCCcEEEEEEEeeeeeeccceeecccCCC--ceeeecCCCcEEEEeccCcCceeEEEec--cCCceeeeccCCee
Confidence 4 333221111000 0 0 01122222 23444443 566777888777775543 34445556556667
Q ss_pred EEEEEEccCCCcEEEEEECCC----CEEEEEcC--CCCchhHHHhhhhhccCCCceEEe--ecCCCceeEEEEcCCCCCE
Q psy4510 414 VTTVEWHPTESSTFASGGADD----QIALWDLA--VERDSEIEQREAELKDLPSQLLFI--HLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg----~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~ 485 (812)
|..+ +++++..++++++.++ .-.||.+. ..... .++.. ..+...+.+++|+|++.++
T Consensus 366 v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~--------------~~lt~~~~~~~~~~~s~~fSpdgky~ 430 (470)
T d2bgra1 366 VIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKV--------------TCLSCELNPERCQYYSVSFSKEAKYY 430 (470)
T ss_dssp EEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCE--------------EESSTTTSTTTBCBEEEEECTTSSEE
T ss_pred EEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCce--------------eEecccccCCCCCEEEEEECCCCCEE
Confidence 7776 4444445555554332 22455443 22110 11110 1223468899999999877
Q ss_pred EEEEeCCC
Q psy4510 486 IISTANSG 493 (812)
Q Consensus 486 ~~~~~~~~ 493 (812)
+.+.+...
T Consensus 431 ~~~~s~~~ 438 (470)
T d2bgra1 431 QLRCSGPG 438 (470)
T ss_dssp EEEECSBS
T ss_pred EEEecCCC
Confidence 77766544
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.25 E-value=2e-12 Score=133.15 Aligned_cols=231 Identities=7% Similarity=-0.045 Sum_probs=143.2
Q ss_pred EEEecCCCcEEEEccCCCCcccccc--------------------------cccCCCCCCeeeeeEcCCCCcEEEee-CC
Q psy4510 192 LATGDCKRNIHIWTPREAGAWQVDQ--------------------------KPLGGHTNSAEDLQWSDLKTALQTVD-DP 244 (812)
Q Consensus 192 lat~~~dg~v~iwd~~~~~~~~~~~--------------------------~~l~~h~~~V~~l~~s~~~~~l~s~~-~d 244 (812)
++||+.+|.|++|++.+++.....- ..-..|.-......++|||++|.+.. .+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence 6788899999999988765322110 00112444556666789999996665 67
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcE------------------EEEeCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNI------------------HIWTPREA 305 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i------------------~vwd~~~~ 305 (812)
..|.++|+.+. +....+. .+......++|+|+++...+++.....+ ..+|..+.
T Consensus 94 ~rVavIDl~t~-------k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~ 166 (441)
T d1qnia2 94 TRVARIRLDIM-------KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETM 166 (441)
T ss_dssp TEEEEEETTTT-------EEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTC
T ss_pred CEEEEEECCCC-------cEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccc
Confidence 88999999985 4444443 4567899999999985444443333333 34666655
Q ss_pred CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 306 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.. ..... -.+....+.|+|+|+.+++++.....+..++..+......+... ..-..+.+.|+|+++..+
T Consensus 167 ~v----~~qI~-v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~-----n~p~~~~~~~dGk~~~v~- 235 (441)
T d1qnia2 167 DV----AWQVI-VDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF-----NVERIAAAVKAGNFKTIG- 235 (441)
T ss_dssp SE----EEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE-----EHHHHHHHHHTTCCBCCT-
T ss_pred ee----eEEEe-cCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC-----CccceEEEecCCCEEEeC-
Confidence 42 11111 12356889999999975555544344433333221111111110 011223456788866654
Q ss_pred CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.++.+.+++.. ....+..+.....+ ..+.++|+|..+++++..+++|.+||+.+.
T Consensus 236 ~~~v~vvd~~~---~~~v~~~IPvgksP-hGv~vSPDGkyl~~~~~~~~tvsv~d~~k~ 290 (441)
T d1qnia2 236 DSKVPVVDGRG---ESEFTRYIPVPKNP-HGLNTSPDGKYFIANGKLSPTVSVIAIDKL 290 (441)
T ss_dssp TCCCCEEECSS---SCSSEEEECCBSSC-CCEEECTTSCEEEEECTTSSBEEEEEGGGH
T ss_pred CCCcEEEEccc---CCceEEEEeCCCCc-cCceECCCCCEEEEeCCcCCcEEEEEeehh
Confidence 46777777765 34566677666554 789999999766777888999999999764
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=2e-08 Score=98.36 Aligned_cols=243 Identities=10% Similarity=0.047 Sum_probs=148.2
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-C--ceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-F--QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.|.|-|..... .+.+..+...+...+|||||+.||-.... + .+.+.+... .....+..+.+...
T Consensus 20 ~l~i~d~dG~~-----~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 86 (269)
T d2hqsa1 20 ELRVSDYDGYN-----QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN--------GAVRQVASFPRHNG 86 (269)
T ss_dssp EEEEEETTSCS-----CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT--------CCEEEEECCSSCEE
T ss_pred EEEEEcCCCCC-----cEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeeccc--------CceeEEeeeecccc
Confidence 46666665443 34445567778999999999999876533 3 344555544 44556667788889
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
...|+|++..++......+...++....... ................+++++..++++...+|...+|........
T Consensus 87 ~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~- 162 (269)
T d2hqsa1 87 APAFSPDGSKLAFALSKTGSLNLYVMDLASG---QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA- 162 (269)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTC---CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-
T ss_pred cceecCCCCeeeEeeecCCccceeecccccc---cceeeeeccccccccccccccccceecccccCCceEeeeeccccc-
Confidence 9999999955555555555544444333221 122233344555677788888877777777775555544321111
Q ss_pred ceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC--
Q psy4510 357 CMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD-- 433 (812)
Q Consensus 357 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-- 433 (812)
...+ ..+........|+|+++.++..+ ..+...+|.... ..... ....+........|+|+|..++.+....
T Consensus 163 -~~~~-~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~--~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~ 237 (269)
T d2hqsa1 163 -PQRI-TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL--ATGGV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMG 237 (269)
T ss_dssp -CEEC-CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET--TTCCE-EECCCSSSCEEEEECTTSSEEEEEEEETTE
T ss_pred -ceee-ecccccccccccccccceeEEEeecCCceeeeEeec--ccccc-eEeecCccccceEECCCCCEEEEEEcCCCC
Confidence 1222 34456677889999999665554 445555555543 22233 3334556677889999986554554432
Q ss_pred CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 434 DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 434 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
..|.++++... ...........+...+|+|-
T Consensus 238 ~~l~~~~~dg~-----------------~~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 238 SVLNLVSTDGR-----------------FKARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp EEEEEEETTSC-----------------CEEECCCSSSEEEEEEECCC
T ss_pred cEEEEEECCCC-----------------CEEEEeCCCCcEEeEEeCCC
Confidence 36788888766 23333334556788899984
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.07 E-value=3.7e-08 Score=100.89 Aligned_cols=264 Identities=9% Similarity=-0.047 Sum_probs=147.9
Q ss_pred CCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccC
Q psy4510 470 QKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNL 549 (812)
Q Consensus 470 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l 549 (812)
...+.-++++|+++.+.++ ..+.+..|......................+.+++++...+++....+...+....+...
T Consensus 39 ~~~~s~la~s~d~~~ly~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~ 117 (365)
T d1jofa_ 39 DEPISWMTFDHERKNIYGA-AMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEE-EBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCCEEEEcCCCCEEEEE-eCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence 3456779999998655554 556666665544333222222333345567788888655566665443333333322221
Q ss_pred cccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcc
Q psy4510 550 TSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPF 629 (812)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~ 629 (812)
.... .+......... ..............+.+++|+|+|++++++. .....|.+|+........
T Consensus 118 ~~~~-----~~~~~~~~~~~------~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d-~g~d~v~~~~~~~~g~~~---- 181 (365)
T d1jofa_ 118 AGYG-----NVFSVSETGKL------EKNVQNYEYQENTGIHGMVFDPTETYLYSAD-LTANKLWTHRKLASGEVE---- 181 (365)
T ss_dssp CCEE-----EEEEECTTCCE------EEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEECTTSCEE----
T ss_pred CCcc-----eeEeeeeccee------cCcccCcccCCCCcceEEEECCCCCEEEEee-CCCCEEEEEEccCCCcee----
Confidence 1000 00000000000 0000111122233578999999999999874 345578888765432100
Q ss_pred cccccccccCCCCCCCCCCeee--ecCCCCceEEEEeCCCCCCeE-EecCCCceEEEEecCCCce---------------
Q psy4510 630 QLAEHNKKRGKGPGIPTPPLFS--FSGHLTEGFAMDWSSTEPGVL-ATGDCKRNIHIWTPREAGA--------------- 691 (812)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~--~~gh~~~V~~l~~sp~~~~~l-as~s~Dg~v~iWd~~~~~~--------------- 691 (812)
.... ..........++|+| +++++ ++.-.+++|.+|++..++.
T Consensus 182 ------------------~~~~~~~~~~g~gPr~i~f~p-dg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T d1jofa_ 182 ------------------LVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ------------------EEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred ------------------eccceeecCCCCceEEEEECC-CCceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccc
Confidence 1111 112345789999999 56554 6667789999999976321
Q ss_pred --------------eEEEEecCCCCEEEeecC------CCeEEEeecCCCCCccccc--ccccCCCcceeEeEEec-CCc
Q psy4510 692 --------------WSVYLYTNRFGVLATGDC------KRNIHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQWSP-GEK 748 (812)
Q Consensus 692 --------------~~~~~~s~dg~~lasgs~------dg~i~iwd~~~~~~~~~~~--~~~~gH~~~V~~l~fs~-dg~ 748 (812)
...+.++|||++|+++.. .+.|..|++.......... ...........+++|+| +|+
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~ 322 (365)
T d1jofa_ 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred ccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCC
Confidence 123568999999988643 2347777776543211011 11112223467799998 889
Q ss_pred eeEEeeccCCceEEeeecCcc
Q psy4510 749 RVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 749 ~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+++++...++.|.||+++...
T Consensus 323 ~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 323 WMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEEEECSSSCEEEEEEEETTE
T ss_pred EEEEEeCCCCeEEEEEEeCCc
Confidence 555666788999999987664
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.02 E-value=2.7e-08 Score=102.00 Aligned_cols=261 Identities=10% Similarity=0.036 Sum_probs=149.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE--EEee-CCCceEEeeCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL--QTVD-DPFQLAEHNKK 253 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l--~s~~-~d~~i~vwd~~ 253 (812)
..+.-|+|+| ++++|.++.. +.+..|.+........... .........++++++++.+ +++. ..+.+..+.+.
T Consensus 40 ~~~s~la~s~-d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~--~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~ 115 (365)
T d1jofa_ 40 EPISWMTFDH-ERKNIYGAAM-KKWSSFAVKSPTEIVHEAS--HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCCSEEEECT-TSSEEEEEEB-TEEEEEEEEETTEEEEEEE--EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCEEEEcC-CCCEEEEEeC-CcEEEEEEeCCCCeEEEee--ecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEcc
Confidence 3445699999 9999887764 5788887775432211111 1122345678888999844 3332 23444444332
Q ss_pred CCCCCC------CCCC---CceE-EcCCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceec-cccccCCCCC
Q psy4510 254 RGKGPG------IPTP---PLFS-FSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVD-QKPLVGHTNS 321 (812)
Q Consensus 254 ~~~~~~------~~~~---~~~~-~~~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~ 321 (812)
...... .... +... -+.....+.++.|+|++ +++++++ ....|.+|+.......... ..........
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG-~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~g 194 (365)
T d1jofa_ 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred CCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCC-CEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCc
Confidence 210000 0000 0111 11122347899999999 5555554 4567888887655431111 1112234567
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc--eeec-------------CCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC--MLTL-------------PNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~-------------~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
...++|+|+++.+.++...+++|.+|++........ .... ...+......+.++|+|++|+++..
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr 274 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence 899999999997778888899999999875322110 0000 0112234567899999998777643
Q ss_pred ------CCcEEEEecCCCCCCCce-----EEcccCCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 ------DGCIHVWDLRRFKKGSSV-----ATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 ------dg~i~iwd~~~~~~~~~~-----~~~~~h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+.|..|++.. .+... ............++++| +|..++++...++.|.+|+++..
T Consensus 275 ~~~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 275 ANKFELQGYIAGFKLRD--CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ESSTTSCCEEEEEEECT--TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cCCCccceEEEEEEecC--CCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 23377787764 22211 11112234456789998 55434455566889999988654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.01 E-value=2.8e-08 Score=99.06 Aligned_cols=232 Identities=7% Similarity=-0.057 Sum_probs=157.6
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.+..++++| +|+++++...+++|..|+.... ...+......+.+++|+++|+++++...++.+.+++.....
T Consensus 29 ~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~g~------~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~- 100 (302)
T d2p4oa1 29 FLENLASAP-DGTIFVTNHEVGEIVSITPDGN------QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD- 100 (302)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTTCC------EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT-
T ss_pred CcCCEEECC-CCCEEEEeCCCCEEEEEeCCCC------EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccc-
Confidence 477899999 9999999999999988886543 23344556789999999999998888888888888876531
Q ss_pred CCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec------cccccCCCCCEEEEEEcC
Q psy4510 258 PGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD------QKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 258 ~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~------~~~~~~h~~~v~~~~~~p 329 (812)
.....+ .........+++.+++ .++++.+.++.+..++...+...... .............+.+.
T Consensus 101 -----~~~~~~~~~~~~~~~n~i~~~~~g-~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~- 173 (302)
T d2p4oa1 101 -----GTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF- 173 (302)
T ss_dssp -----SCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE-
T ss_pred -----cceeeccccCCccccceeEEccCC-CEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc-
Confidence 222222 2234568899999998 77888778888888887765421111 01111222355667665
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc--eEEc
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VATF 407 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~~ 407 (812)
+..++++.+..+.|..+++............ ........+++.++|+++++...++.|..++.. ++. +...
T Consensus 174 -~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~----G~~~~~~~~ 246 (302)
T d2p4oa1 174 -GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF--VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD----RSTTIIAQA 246 (302)
T ss_dssp -TTEEEEEETTTTEEEEEEBCTTSCBCCCEEE--EESCCCSSEEEBTTCCEEEECBTTCCEEEECTT----CCEEEEECG
T ss_pred -CCceeeecCCCCeEEeccccccccccccccc--cCCCCCcceEECCCCCEEEEEcCCCcEEEECCC----CCEEEEEec
Confidence 4457888888999999988754322222111 123345679999999988888888999999874 332 3334
Q ss_pred ccCCCCEEEEEE---ccCCCcEEEEEEC
Q psy4510 408 KHHTAPVTTVEW---HPTESSTFASGGA 432 (812)
Q Consensus 408 ~~h~~~v~~v~~---~p~~~~~l~s~~~ 432 (812)
...-...++++| .+++ +.|..++.
T Consensus 247 ~~~~~~pt~vafg~~~~D~-~~Lyvtt~ 273 (302)
T d2p4oa1 247 EQGVIGSTAVAFGQTEGDC-TAIYVVTN 273 (302)
T ss_dssp GGTCTTEEEEEECCSTTTT-TEEEEEEC
T ss_pred CCCCCCceEEEEcCCCCCC-CEEEEECC
Confidence 444566899999 5565 45555443
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=1.2e-07 Score=92.63 Aligned_cols=244 Identities=9% Similarity=0.046 Sum_probs=142.1
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc--EEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--IHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.|.|.|... .....+..+...+...+|||||+.+.++....+. +.+.+...+. ...+..+.....
T Consensus 20 ~l~i~d~dG--------~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 86 (269)
T d2hqsa1 20 ELRVSDYDG--------YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-----VRQVASFPRHNG 86 (269)
T ss_dssp EEEEEETTS--------CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-----EEEEECCSSCEE
T ss_pred EEEEEcCCC--------CCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc-----eeEEeeeecccc
Confidence 466666654 3344444556778899999999444444444443 5555555443 344556778889
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
...|+|++..++.....++...++....... ..... ...........+++++. .+++...+|...+|.... ...
T Consensus 87 ~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~--~~~ 161 (269)
T d2hqsa1 87 APAFSPDGSKLAFALSKTGSLNLYVMDLASG--QIRQV-TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI--NGG 161 (269)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTC--CEEEC-CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET--TSS
T ss_pred cceecCCCCeeeEeeecCCccceeecccccc--cceee-eeccccccccccccccccceecccccCCceEeeeec--ccc
Confidence 9999999997666655555544444332111 12222 23444555667777777 555555566555544432 233
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
....+..+........|+|++..++.+....+...+|....... ...............|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~----------------~~~~~~~~~~~~~p~~SPDG 225 (269)
T d2hqsa1 162 APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG----------------GVQVLSSTFLDETPSLAPNG 225 (269)
T ss_dssp CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC----------------CEEECCCSSSCEEEEECTTS
T ss_pred cceeeecccccccccccccccceeEEEeecCCceeeeEeecccc----------------cceEeecCccccceEECCCC
Confidence 44455556677888899999876666666666666666554421 11222334456778999999
Q ss_pred CCEEEEEeCCCe-EEEE-eCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 483 PGTIISTANSGF-NIFR-TISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 483 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
..++..+..++. .+|. ..... .........+.+...+|+|-
T Consensus 226 ~~i~f~s~~~~~~~l~~~~~dg~--~~~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 226 TMVIYSSSQGMGSVLNLVSTDGR--FKARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp SEEEEEEEETTEEEEEEEETTSC--CEEECCCSSSEEEEEEECCC
T ss_pred CEEEEEEcCCCCcEEEEEECCCC--CEEEEeCCCCcEEeEEeCCC
Confidence 888776655443 3332 22222 22222233456777888884
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.96 E-value=1.1e-07 Score=94.77 Aligned_cols=249 Identities=8% Similarity=0.064 Sum_probs=156.3
Q ss_pred eEEEEeCCCCCCeEEEecC-------CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 179 GFAMDWSSTEPGVLATGDC-------KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~-------dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
.-.++|.| +|++.++... +|+|..||..++................-..++|.+++..|++++..+.+...+
T Consensus 20 ~EGpa~d~-dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~ 98 (314)
T d1pjxa_ 20 AEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp CEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred CeEeEEeC-CCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence 45578999 9998876432 467888988876532221111122223356799999999888888777788888
Q ss_pred CCCCCCCCCCCCCceEE--cCCC-CcEEEEEecCCCCCEEEEEeC---------------CCcEEEEeCCCCCcceeccc
Q psy4510 252 KKRGKGPGIPTPPLFSF--SGHL-TEGFAMDWSSTEPGVLATGDC---------------KRNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~--~~h~-~~v~~l~~sp~~~~~l~sg~~---------------dg~i~vwd~~~~~~~~~~~~ 313 (812)
.+... ..+... .+.. ...+.+++.++| .+.++-.. .|.|..++. .... .
T Consensus 99 ~~g~~------~~~~~~~~~g~~~~~pndl~~d~~G-~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~--dg~~----~ 165 (314)
T d1pjxa_ 99 TDGTF------EEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTT--DGQM----I 165 (314)
T ss_dssp TTSCE------EECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECT--TSCE----E
T ss_pred CCCcE------EEEEeccccccccCCCcEEEECCCC-CEEEecCccCcccccccceeccCCceEEEEee--cCce----e
Confidence 76531 111111 1111 124678999998 66665422 123333333 2211 1
Q ss_pred cccCCCCCEEEEEEcCCCC----eEEEEEECCCeEEEEECCCCCccc---ceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 314 PLVGHTNSVEDLQWSPGEK----RVLASCSVDLSIRIWDTRVINTKS---CMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~----~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
.+.......+.++|+|++. .++++-+..+.|..||+....... ....+...+......+++..+|++.++...
T Consensus 166 ~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~ 245 (314)
T d1pjxa_ 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcC
Confidence 1112223457889998764 466666778899999876322111 112222223334568999999998888888
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+.|.+||.. .+..+..+.......++++|.|++..++++.+..++|...++...
T Consensus 246 ~g~I~~~dp~---~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 246 SSHIEVFGPD---GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEECTT---CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEEeCC---CCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence 8999999986 345556666666788999999987667777777888888887655
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.94 E-value=3.1e-07 Score=88.90 Aligned_cols=238 Identities=9% Similarity=0.052 Sum_probs=151.4
Q ss_pred CceEEEEeCCCCCCeEEE-ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLAT-GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat-~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
-.-..+++.+ +|++.++ .+..+.|..++....... .....+ ......++++++++..++....+.+++++..+.
T Consensus 14 ~~P~~vavd~-dG~i~v~~~~~~~~i~~~~~~~~~~~---~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~ 88 (260)
T d1rwia_ 14 LSPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTT---VLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN 88 (260)
T ss_dssp CCEEEEEECT-TCCEEEEECSSSCEEEEEC----CEE---ECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred CCCCEEEEcC-CCCEEEEEcCCCCEEEEEcCCCceEE---EeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeeccc
Confidence 3457899999 8986665 455677888876654421 111222 234578899999987777666666766654432
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
..+... .......++++.+++ .++++-.....+..++......... .. .......++++.|++. ++
T Consensus 89 -------~~~~~~-~~~~~p~~iavd~~g-~i~v~d~~~~~~~~~~~~~~~~~~~---~~-~~~~~p~~i~~~~~g~-~~ 154 (260)
T d1rwia_ 89 -------QTVLPF-DGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVL---PF-TGLNDPDGVAVDNSGN-VY 154 (260)
T ss_dssp -------CEECCC-CSCCSEEEEEECTTC-CEEEEEGGGTEEEEECTTCSSCEEC---CC-CSCCSCCEEEECTTCC-EE
T ss_pred -------eeeeee-eeeeecccccccccc-eeEeeccccccccccccccceeeee---ee-cccCCcceeeecCCCC-Ee
Confidence 222222 123567899999988 6766666666777777655432111 11 1223457899999987 78
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-cCCCCE
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHTAPV 414 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v 414 (812)
++...++.|..++..... ...+....-.....|++.++|+++++....+.|..++... .....+. ..-...
T Consensus 155 v~~~~~~~i~~~d~~~~~----~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~----~~~~~~~~~~~~~P 226 (260)
T d1rwia_ 155 VTDTDNNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS----TTSTVLPFTGLNTP 226 (260)
T ss_dssp EEEGGGTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC----SCCEECCCCSCCCE
T ss_pred eeccccccccccccccce----eeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC----CeEEEEccCCCCCe
Confidence 888888899999976321 2223234455678999999999888888888888888642 2223322 223456
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..|++++++ .++++-..+++|+..+..
T Consensus 227 ~~i~~d~~g-~l~vad~~~~rI~~i~~~ 253 (260)
T d1rwia_ 227 LAVAVDSDR-TVYVADRGNDRVVKLTSL 253 (260)
T ss_dssp EEEEECTTC-CEEEEEGGGTEEEEECCC
T ss_pred EEEEEeCCC-CEEEEECCCCEEEEEeCC
Confidence 899999987 577776667777666543
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.83 E-value=1.4e-06 Score=91.81 Aligned_cols=234 Identities=13% Similarity=0.068 Sum_probs=129.7
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee---------CCCceEEeeCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD---------DPFQLAEHNKK 253 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~---------~d~~i~vwd~~ 253 (812)
.|.+ ++.++.. ..+|.|.+||+.+++... ......-..-.+....||||+++++... ..+.+.++|+.
T Consensus 23 ~W~~-~~~~~~~-~~~g~i~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~ 99 (465)
T d1xfda1 23 KWIS-DTEFIYR-EQKGTVRLWNVETNTSTV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (465)
T ss_dssp CBSS-SSCBCCC-CSSSCEEEBCGGGCCCEE-EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EEeC-CCcEEEE-eCCCcEEEEECCCCCEEE-EEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEcc
Confidence 5888 7776654 446889999998876421 1111112234677888999999987764 34678899998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-------------
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN------------- 320 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~------------- 320 (812)
++. ..++.........+....|||+|. .||-.. ++.|.+.+...+..... ...+..+
T Consensus 100 ~~~-----~~~l~~~~~~~~~l~~~~wSPDG~-~iafv~-~~nl~~~~~~~~~~~~l---t~~g~~~~i~nG~~d~vyee 169 (465)
T d1xfda1 100 HGD-----PQSLDPPEVSNAKLQYAGWGPKGQ-QLIFIF-ENNIYYCAHVGKQAIRV---VSTGKEGVIYNGLSDWLYEE 169 (465)
T ss_dssp SCC-----CEECCCTTCCSCCCSBCCBCSSTT-CEEEEE-TTEEEEESSSSSCCEEE---ECCCBTTTEEEEECCHHHHH
T ss_pred CCc-----eeeccCccCCccccceeeeccCCc-eEEEEe-cceEEEEecCCCceEEE---ecccCcceeeccccchhhhh
Confidence 862 222322223334556789999994 555443 57888888876553211 1111111
Q ss_pred ----CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 321 ----SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 321 ----~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
.-..+-|||+|+++++.--.+..|..+.+.... ......+..+.+-.-|.--. ...+.++|+.
T Consensus 170 e~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~---------~~~~p~~~~~~Yp~~G~~np----~~~l~v~d~~ 236 (465)
T d1xfda1 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT---------GSIYPTVKPYHYPKAGSENP----SISLHVIGLN 236 (465)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS---------SSSSCCCEEEECCBTTSCCC----EEEEEEEESS
T ss_pred hhccccceEEECCCCCeEEEEEecccccceeeccccc---------ccccceeeeeeccccCCCCC----ceeEEEEecC
Confidence 125778999999755544455556555543110 11112233344332221100 1247777875
Q ss_pred CCCCCCceEE-----cccCCCCEEEEEEccCCCcEEEEE-ECCC---CEEEEEcCCCC
Q psy4510 397 RFKKGSSVAT-----FKHHTAPVTTVEWHPTESSTFASG-GADD---QIALWDLAVER 445 (812)
Q Consensus 397 ~~~~~~~~~~-----~~~h~~~v~~v~~~p~~~~~l~s~-~~dg---~v~iwd~~~~~ 445 (812)
... ..... ......-+..+.|+|++. +++.. ..+. .|.++|..++.
T Consensus 237 ~~~--~~~~~~~~~~~~~~~~y~~~~~W~~d~~-~~~~~~nR~q~~~~i~~~d~~tg~ 291 (465)
T d1xfda1 237 GPT--HDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGV 291 (465)
T ss_dssp SSC--CCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCC
T ss_pred CCc--EEEEEeccCcCccccceeeeeEEcCCCe-EEEEEEccccccceEEEEcCCCCc
Confidence 321 11111 122233478899999864 44443 3332 57778887774
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.77 E-value=1e-06 Score=87.41 Aligned_cols=236 Identities=9% Similarity=-0.015 Sum_probs=151.5
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
.+..++++|+|+++++...++.|..++... ....+......+.+++|.|++ .+++++..++.+..|+...
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g---------~~~~~~~~~~~~~gla~~~dG-~l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDG---------NQQIHATVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVK 98 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC---------CEEEEEECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCC---------CEEEEEcCCCCcceEEEcCCC-CeEEEecCCceEEEEEecc
Confidence 467899999999999888899888887553 234455566789999999999 7888888888888888765
Q ss_pred CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce------eecCCcCCCCeEEEEEcCCC
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM------LTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------~~~~~~~~~~v~~l~~~~~~ 378 (812)
......... ........+.+++.+++. ++++.+.++.+..++.......... ...........+.+.+.. +
T Consensus 99 ~~~~~~~~~-~~~~~~~~n~i~~~~~g~-~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~ 175 (302)
T d2p4oa1 99 SDGTVETLL-TLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-N 175 (302)
T ss_dssp TTSCEEEEE-ECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-T
T ss_pred cccceeecc-ccCCccccceeEEccCCC-EEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-C
Confidence 432111111 122445689999999987 6888888888888887743211100 001112233467777764 3
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
.++++.+..+.|..++............+. .......+++.++| +++++...+++|..++......
T Consensus 176 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~pdgia~d~dG-~l~va~~~~~~V~~i~p~G~~~------------ 241 (302)
T d2p4oa1 176 FLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRSTT------------ 241 (302)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCCEE------------
T ss_pred ceeeecCCCCeEEecccccccccccccccc-CCCCCcceEECCCC-CEEEEEcCCCcEEEECCCCCEE------------
Confidence 466777788899988886422211222222 23345679999997 5777777788999987654310
Q ss_pred CCCceEEeecCCCceeEEEE---cCCCCCEEEEEe
Q psy4510 459 LPSQLLFIHLGQKEIKELHW---HPQLPGTIISTA 490 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~---~p~~~~~~~~~~ 490 (812)
.+.....+-...+.++| .++++.+++++.
T Consensus 242 ---~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~ 273 (302)
T d2p4oa1 242 ---IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 273 (302)
T ss_dssp ---EEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ---EEEecCCCCCCceEEEEcCCCCCCCEEEEECC
Confidence 11111223345788999 555555555544
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.71 E-value=1.3e-05 Score=78.06 Aligned_cols=243 Identities=8% Similarity=0.049 Sum_probs=157.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccc--cCCCCCCeeeeeEcCCCC-cEEEe-eCCCceEEeeC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP--LGGHTNSAEDLQWSDLKT-ALQTV-DDPFQLAEHNK 252 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~--l~~h~~~V~~l~~s~~~~-~l~s~-~~d~~i~vwd~ 252 (812)
+....++++| +++++++-..++.|++||.+..-. ...... -.+....-..+++.++.. .+++. +.++.|.+++.
T Consensus 23 ~~P~gvavd~-dg~i~VaD~~n~rI~v~d~~G~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 100 (279)
T d1q7fa_ 23 TEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFK-FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 100 (279)
T ss_dssp SCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEE-EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred CCccEEEEcC-CCCEEEEECCCCEEEEEeCCCCEE-EEecccCCCcccccccccccccccccccceeccCCccccccccc
Confidence 4568899999 999988887888999998663211 000000 011222334556555543 33333 34556766765
Q ss_pred CCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 253 KRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
.. .....+. ........+++.+++ .++++....+.+.+++....- ........+......+++.+++
T Consensus 101 ~g--------~~~~~~~~~~~~~p~~~avd~~G-~i~v~~~~~~~~~~~~~~g~~---~~~~g~~~~~~~~~~i~~d~~g 168 (279)
T d1q7fa_ 101 YG--------QFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNV---LHKFGCSKHLEFPNGVVVNDKQ 168 (279)
T ss_dssp TS--------CEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE---EEEEECTTTCSSEEEEEECSSS
T ss_pred cc--------cceeecCCCcccccceeccccCC-cEEEEeeccceeeEeccCCce---eecccccccccccceeeeccce
Confidence 43 3444442 234567889999988 677777767778888765331 1111123456678899999988
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEccc
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
. ++++....+.|++||... ..+.++. .+.......|++.++|+++++-. .++.|.+|+. .++.+.++..
T Consensus 169 ~-i~v~d~~~~~V~~~d~~G----~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~----~G~~~~~~~~ 239 (279)
T d1q7fa_ 169 E-IFISDNRAHCVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ----DGQLISALES 239 (279)
T ss_dssp E-EEEEEGGGTEEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT----TSCEEEEEEE
T ss_pred e-EEeeeccccceeeeecCC----ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC----CCCEEEEEeC
Confidence 7 788888889999999752 2333431 23445678999999999777654 3457999986 4666666543
Q ss_pred C--CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 410 H--TAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 410 h--~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
. ......|++.|++ + |++++.+++|++|.....
T Consensus 240 ~~~~~~p~~vav~~dG-~-l~V~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 240 KVKHAQCFDVALMDDG-S-VVLASKDYRLYIYRYVQL 274 (279)
T ss_dssp SSCCSCEEEEEEETTT-E-EEEEETTTEEEEEECSCC
T ss_pred CCCCCCEeEEEEeCCC-c-EEEEeCCCeEEEEEeeee
Confidence 2 3457899999986 4 455667899999998765
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.68 E-value=2.7e-06 Score=84.73 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=144.8
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC--CceEEeeCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP--FQLAEHNKKRGK 256 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d--~~i~vwd~~~~~ 256 (812)
+-.++|.+ +|++.++-...++|+.|+..+.. ....+.........|+++++|+++++...+ ....++.+...
T Consensus 42 lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~----~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~- 115 (319)
T d2dg1a1 42 LEGLNFDR-QGQLFLLDVFEGNIFKINPETKE----IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN- 115 (319)
T ss_dssp EEEEEECT-TSCEEEEETTTCEEEEECTTTCC----EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-
T ss_pred cEeCEECC-CCCEEEEECCCCEEEEEECCCCe----EEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC-
Confidence 35789999 99988888888999999887764 223333444567899999999877765432 23334433321
Q ss_pred CCCCCCCCceEEcCC---CCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 257 GPGIPTPPLFSFSGH---LTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h---~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
...+..+..+ ......+++.++| .+.++... .+.+..++..... ...+...-...+.++|
T Consensus 116 -----~~~~~~~~~~~~~~~~~nd~~~d~~G-~l~vtd~~~~~~~~~g~v~~~~~dg~~-----~~~~~~~~~~pnGia~ 184 (319)
T d2dg1a1 116 -----GDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRT-----VTPIIQNISVANGIAL 184 (319)
T ss_dssp -----SCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCC-----EEEEEEEESSEEEEEE
T ss_pred -----CceeeeeccCCCcccCCcceeEEecc-ceeecccccccccCcceeEEEecccce-----eEEEeeccceeeeeee
Confidence 1222222222 2346789999998 56555422 1234444443322 1122222335688999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCccccee----ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCML----TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+|+++.++++-+..+.|..|++.......... ............+++.++|++.++....+.|.+||. .++.
T Consensus 185 s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p----~G~~ 260 (319)
T d2dg1a1 185 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK----RGYP 260 (319)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT----TSCE
T ss_pred ccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC----CCcE
Confidence 99999777777888999999986432111110 010111223567999999998888888999999996 4666
Q ss_pred eEEcc------cCCCCEEEEEEccCCCcEEEEE
Q psy4510 404 VATFK------HHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 404 ~~~~~------~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
+..+. ++...+++++|.|....++++.
T Consensus 261 l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 261 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred EEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence 66654 2344678999998765444444
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=4.3e-05 Score=79.99 Aligned_cols=156 Identities=10% Similarity=0.116 Sum_probs=94.9
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE--------ECCCeEEEEEC
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC--------SVDLSIRIWDT 349 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~--------~~dg~i~iwd~ 349 (812)
..|.+++ .++. -..+|.|.+|++.++..... .....-..-.+....|+|+++.+|+.. +..+.+.++|+
T Consensus 22 ~~W~~~~-~~~~-~~~~g~i~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~ 98 (465)
T d1xfda1 22 AKWISDT-EFIY-REQKGTVRLWNVETNTSTVL-IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (465)
T ss_dssp CCBSSSS-CBCC-CCSSSCEEEBCGGGCCCEEE-ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred CEEeCCC-cEEE-EeCCCcEEEEECCCCCEEEE-EcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEc
Confidence 3588876 4443 35578999999988764221 111111233677889999999765543 34578899999
Q ss_pred CCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE-cccCCCCE--------------
Q psy4510 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-FKHHTAPV-------------- 414 (812)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v-------------- 414 (812)
.++... .+... ......+....|+|+|+.||-.. ++.|.+.+... +..++. ..+..+.|
T Consensus 99 ~~~~~~-~l~~~-~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~---~~~~~lt~~g~~~~i~nG~~d~vyeee~~ 172 (465)
T d1xfda1 99 PHGDPQ-SLDPP-EVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVG---KQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (465)
T ss_dssp SSCCCE-ECCCT-TCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSS---SCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred cCCcee-eccCc-cCCccccceeeeccCCceEEEEe-cceEEEEecCC---CceEEEecccCcceeeccccchhhhhhhc
Confidence 865322 22212 33445567789999999777665 56788888763 222222 22222212
Q ss_pred ---EEEEEccCCCcEEEEE-ECCCCEEEEEcCC
Q psy4510 415 ---TTVEWHPTESSTFASG-GADDQIALWDLAV 443 (812)
Q Consensus 415 ---~~v~~~p~~~~~l~s~-~~dg~v~iwd~~~ 443 (812)
.++-|||+|. .||.. -.+..|..+.+..
T Consensus 173 ~~~~a~~WSPDgk-~iaf~~~D~s~V~~~~~~~ 204 (465)
T d1xfda1 173 KTHIAHWWSPDGT-RLAYAAINDSRVPIMELPT 204 (465)
T ss_dssp SSSEEEEECTTSS-EEEEEEEECTTSCEEEECC
T ss_pred cccceEEECCCCC-eEEEEEecccccceeeccc
Confidence 4678999985 55554 4456676766643
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.64 E-value=3.3e-06 Score=81.37 Aligned_cols=234 Identities=9% Similarity=0.059 Sum_probs=141.1
Q ss_pred ccCCCCC--CeeeeeEcCCCCcEEEe-eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 218 PLGGHTN--SAEDLQWSDLKTALQTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 218 ~l~~h~~--~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
++.++.. .-..|+++++|+..++. +..+.+..++.... ........+ ......+++++++ .++++....
T Consensus 6 ~~~~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~------~~~~~~~~~-~~~p~gvav~~~g-~i~v~d~~~ 77 (260)
T d1rwia_ 6 PFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGST------GTTVLPFNG-LYQPQGLAVDGAG-TVYVTDFNN 77 (260)
T ss_dssp CCCSCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----------CEEECCCCS-CCSCCCEEECTTC-CEEEEETTT
T ss_pred ecccCCCcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCc------eEEEeccCC-ccCceEEEEcCCC-CEEEeeeee
Confidence 3444443 34789999999966554 45566777665542 111111111 1234678999988 677666666
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.+++++-.+.. ..... .......++++.+++. ++++-.....+..++..... ..............+++
T Consensus 78 ~~i~~~~~~~~~----~~~~~-~~~~~p~~iavd~~g~-i~v~d~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~i~~ 147 (260)
T d1rwia_ 78 RVVTLAAGSNNQ----TVLPF-DGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT----QTVLPFTGLNDPDGVAV 147 (260)
T ss_dssp EEEEECTTCSCC----EECCC-CSCCSEEEEEECTTCC-EEEEEGGGTEEEEECTTCSS----CEECCCCSCCSCCEEEE
T ss_pred ceeeeeeeccce----eeeee-eeeeecccccccccce-eEeeccccccccccccccce----eeeeeecccCCcceeee
Confidence 666665544332 11222 2235678999999987 66666666777777765321 11111222344578999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
+++++++++...++.|..++... .....+ .........|++.+++ +++++....++|..++.....
T Consensus 148 ~~~g~~~v~~~~~~~i~~~d~~~----~~~~~~~~~~~~~p~gi~~d~~g-~l~vsd~~~~~i~~~~~~~~~-------- 214 (260)
T d1rwia_ 148 DNSGNVYVTDTDNNRVVKLEAES----NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTT-------- 214 (260)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTT----CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTTEEEEECTTCSC--------
T ss_pred cCCCCEeeecccccccccccccc----ceeeeeeccccCCCccceeeeee-eeeeeecCCCEEEEEeCCCCe--------
Confidence 99999888888889999999863 223333 2344567899999987 577777777888888765442
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
.......+-.....|++++++. ++++-..
T Consensus 215 --------~~~~~~~~~~~P~~i~~d~~g~-l~vad~~ 243 (260)
T d1rwia_ 215 --------STVLPFTGLNTPLAVAVDSDRT-VYVADRG 243 (260)
T ss_dssp --------CEECCCCSCCCEEEEEECTTCC-EEEEEGG
T ss_pred --------EEEEccCCCCCeEEEEEeCCCC-EEEEECC
Confidence 1111122223567899999864 5555433
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.58 E-value=3.9e-05 Score=75.73 Aligned_cols=109 Identities=7% Similarity=-0.022 Sum_probs=64.0
Q ss_pred CcEEEEEecCCCCCEEEEEeC-------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 273 TEGFAMDWSSTEPGVLATGDC-------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~-------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
....+++|.|+| +++++... +|.|..||..++..............+.-..++|.+++. .++++...+.|.
T Consensus 18 ~g~EGpa~d~dG-~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~-~l~vad~~~~i~ 95 (314)
T d1pjxa_ 18 PGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLGLL 95 (314)
T ss_dssp TTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTEEE
T ss_pred CCCeEeEEeCCC-CEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCC-EEEEEECCCeEE
Confidence 345678999998 56555332 467888998876532211111111223467899999998 466666667788
Q ss_pred EEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEEE
Q psy4510 346 IWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg 384 (812)
..+........ ......+. -...+.+++.++|++.++-
T Consensus 96 ~~~~~g~~~~~-~~~~~~g~~~~~pndl~~d~~G~lyvtd 134 (314)
T d1pjxa_ 96 VVQTDGTFEEI-AKKDSEGRRMQGCNDCAFDYEGNLWITA 134 (314)
T ss_dssp EEETTSCEEEC-CSBCTTSCBCBCCCEEEECTTSCEEEEE
T ss_pred EEeCCCcEEEE-EeccccccccCCCcEEEECCCCCEEEec
Confidence 88876321111 11110111 1235778999998876663
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.53 E-value=4.3e-05 Score=74.18 Aligned_cols=239 Identities=9% Similarity=0.108 Sum_probs=150.6
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC------CCCcEEEEEecCCCCCEEEEE-eCCCcE
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG------HLTEGFAMDWSSTEPGVLATG-DCKRNI 297 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~sg-~~dg~i 297 (812)
.-..|+++++++.+++-...+.|++|+.+. ..+..+.. ....-..+++.++....+++. +.++.|
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G--------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 95 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEG--------RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 95 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTS--------CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCCC--------CEEEEecccCCCcccccccccccccccccccceeccCCcccc
Confidence 357899999998777766778899998654 33333321 112345566665542344433 345577
Q ss_pred EEEeCCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCeEEEEEc
Q psy4510 298 HIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWN 375 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~ 375 (812)
.+++..... ...+ .........++..+++. ++++....+.+.+++... ..+..+ ...+......+++.
T Consensus 96 ~~~~~~g~~-----~~~~~~~~~~~p~~~avd~~G~-i~v~~~~~~~~~~~~~~g----~~~~~~g~~~~~~~~~~i~~d 165 (279)
T d1q7fa_ 96 QIYNQYGQF-----VRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG----NVLHKFGCSKHLEFPNGVVVN 165 (279)
T ss_dssp EEECTTSCE-----EEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS----CEEEEEECTTTCSSEEEEEEC
T ss_pred ccccccccc-----eeecCCCcccccceeccccCCc-EEEEeeccceeeEeccCC----ceeecccccccccccceeeec
Confidence 777754321 2222 23445678999999998 567666777888887642 223322 13456678899999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc--cCCCCEEEEEEccCCCcEEEEEEC-CCCEEEEEcCCCCchhHHHh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGA-DDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~ 452 (812)
++++++++....+.|++||.. ++.+..+. +.......|++.|++ +++++-.. +++|.+++.... ..
T Consensus 166 ~~g~i~v~d~~~~~V~~~d~~----G~~~~~~g~~g~~~~P~giavD~~G-~i~Vad~~~~~~v~~f~~~G~-~~----- 234 (279)
T d1q7fa_ 166 DKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQ-LI----- 234 (279)
T ss_dssp SSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSC-EE-----
T ss_pred cceeEEeeeccccceeeeecC----CceeeeecccccccCCcccccccCC-eEEEEECCCCcEEEEECCCCC-EE-----
Confidence 999988888889999999984 56666663 345567899999998 46665443 456899885422 00
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
..+...........+++.|++. ++++..+..+.+|+....
T Consensus 235 ---------~~~~~~~~~~~p~~vav~~dG~-l~V~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 235 ---------SALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQL 274 (279)
T ss_dssp ---------EEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEECSCC
T ss_pred ---------EEEeCCCCCCCEeEEEEeCCCc-EEEEeCCCeEEEEEeeee
Confidence 0111111123578899999863 555555556777765443
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.42 E-value=2.5e-05 Score=76.42 Aligned_cols=229 Identities=8% Similarity=-0.009 Sum_probs=148.3
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCC
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 260 (812)
...|++.++.+..+--..+.|..||..++... .......+.++++.+++.+++++ . ..+.++|..++.
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~------~~~~~~~~~~i~~~~dg~l~va~-~-~gl~~~d~~tg~---- 89 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRKT------VHALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGV---- 89 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE------EEECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCC----
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCeEE------EEECCCCcEEEEEecCCCEEEEE-e-CccEEeecccce----
Confidence 35677756667777667788999998876521 11234568899999999877654 4 458889988751
Q ss_pred CCCCceEEcCC--CCcEEEEEecCCCCCEEEEEeC----CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 261 PTPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDC----KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 261 ~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~sg~~----dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
.+.+...... ...++.+.+.|+| .+.++... .+.-.+|.+..+. ...+...-...+.++|+++++.+
T Consensus 90 -~~~l~~~~~~~~~~~~nd~~vd~~G-~iw~~~~~~~~~~~~g~l~~~~~g~-----~~~~~~~~~~~Ng~~~s~d~~~l 162 (295)
T d2ghsa1 90 -LTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGK-----VTKLFADISIPNSICFSPDGTTG 162 (295)
T ss_dssp -EEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTE-----EEEEEEEESSEEEEEECTTSCEE
T ss_pred -eeEEeeeecCCCcccceeeEECCCC-CEEEEeccccccccceeEeeecCCc-----EEEEeeccCCcceeeecCCCceE
Confidence 1111111111 2357889999998 55544322 2344566665543 11122223356889999999988
Q ss_pred EEEEECCCeEEEEECCCCCcc----cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 335 LASCSVDLSIRIWDTRVINTK----SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
+++-+..+.|..+++...... ................+++..+|++.++.-..+.|..||. .++.+..+.-.
T Consensus 163 ~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp----~G~~~~~i~lP 238 (295)
T d2ghsa1 163 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT----DGNHIARYEVP 238 (295)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT----TCCEEEEEECS
T ss_pred EEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC----CCcEeeEecCC
Confidence 888888899999987532111 1111111233456788999999998888777889999997 46777777766
Q ss_pred CCCEEEEEEc-cCCCcEEEEEEC
Q psy4510 411 TAPVTTVEWH-PTESSTFASGGA 432 (812)
Q Consensus 411 ~~~v~~v~~~-p~~~~~l~s~~~ 432 (812)
...+++++|- |+...+++|...
T Consensus 239 ~~~~T~~~FGG~d~~~LyvTta~ 261 (295)
T d2ghsa1 239 GKQTTCPAFIGPDASRLLVTSAR 261 (295)
T ss_dssp CSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCceEEEEEeCCCCCEEEEEECC
Confidence 6779999996 555556665543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.39 E-value=5.8e-05 Score=74.77 Aligned_cols=241 Identities=8% Similarity=0.067 Sum_probs=136.5
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEE
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIW 347 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iw 347 (812)
...+..++|.++| ++.++-...+.|+.|+..... ....+.........++++++|+ ++++... .+.|...
T Consensus 39 ~~~lEG~~~D~~G-~Ly~~D~~~g~I~ri~p~g~~----~~~~~~~~~~~p~gla~~~dG~-l~va~~~~~~~~~~i~~~ 112 (319)
T d2dg1a1 39 GLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE----IKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAA 112 (319)
T ss_dssp CCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC----EEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEE
T ss_pred CcCcEeCEECCCC-CEEEEECCCCEEEEEECCCCe----EEEEEeCCCCCeeEEEECCCCC-EEEEecCCCccceeEEEE
Confidence 3445789999998 677777788999999987765 2233334455688999999997 5555432 2334444
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
+........ .. ....-....+.+++.++|++.++... .+.+..++.. +..+..+...-.....|+|+|
T Consensus 113 ~~~~~~~~~-~~-~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d----g~~~~~~~~~~~~pnGia~s~ 186 (319)
T d2dg1a1 113 TENGDNLQD-II-EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD----FRTVTPIIQNISVANGIALST 186 (319)
T ss_dssp CTTSCSCEE-EE-CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT----SCCEEEEEEEESSEEEEEECT
T ss_pred cCCCceeee-ec-cCCCcccCCcceeEEeccceeecccccccccCcceeEEEecc----cceeEEEeeccceeeeeeecc
Confidence 544221111 11 11122345788999999987666432 1234444442 333443333334567899999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe-CCCeEEEEeC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA-NSGFNIFRTI 500 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~-~~~~~~~~~~ 500 (812)
++..+.++-+..++|..|++...... ..................-.+++.+++. +.++.. .+.+.+|..
T Consensus 187 dg~~lyvad~~~~~I~~~d~~~~g~~--------~~~~~~~~~~~~~~~~~PdGl~vD~~G~-l~Va~~~~g~V~~~~p- 256 (319)
T d2dg1a1 187 DEKVLWVTETTANRLHRIALEDDGVT--------IQPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNK- 256 (319)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSS--------EEEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECT-
T ss_pred ccceEEEecccCCceEEEEEcCCCce--------eccccceeeeccCCccceeeeeEcCCCC-EEEEEcCCCEEEEECC-
Confidence 98656666677889999998754210 0000001111112222356789999875 444444 444555543
Q ss_pred CCCCcccEEeec----CCCCeeEEEEcCCCCCeEEEee
Q psy4510 501 SDLPSQLLFIHL----GQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 501 ~~~~~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
.......+.... ....+.+++|.+....+++.+.
T Consensus 257 ~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 257 RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 332222222211 1235778899887655555543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.05 E-value=0.0023 Score=61.86 Aligned_cols=228 Identities=10% Similarity=-0.024 Sum_probs=134.4
Q ss_pred eEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcc
Q psy4510 230 QWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 308 (812)
Q Consensus 230 ~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~ 308 (812)
.|.+....|.-.+ ..+.|..|+..++ ....+. ....+.++++.+++ .++++ +.+ .|.++|..++...
T Consensus 24 ~wd~~~~~l~wvDi~~~~I~r~d~~~g--------~~~~~~-~~~~~~~i~~~~dg-~l~va-~~~-gl~~~d~~tg~~~ 91 (295)
T d2ghsa1 24 TFDPASGTAWWFNILERELHELHLASG--------RKTVHA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLT 91 (295)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTT--------EEEEEE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEE
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCC--------eEEEEE-CCCCcEEEEEecCC-CEEEE-EeC-ccEEeecccceee
Confidence 4445444444333 5677888888774 122222 24567899998886 45554 444 5889999887631
Q ss_pred eeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEE
Q psy4510 309 QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVS 383 (812)
Q Consensus 309 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s 383 (812)
......-......++++.+.|+|. +.++... .+.-.+|.+..+. +..+ ...-..-+.++|+++++ ++++
T Consensus 92 ~l~~~~~~~~~~~~nd~~vd~~G~-iw~~~~~~~~~~~~g~l~~~~~g~----~~~~-~~~~~~~Ng~~~s~d~~~l~~~ 165 (295)
T d2ghsa1 92 LHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVAKGK----VTKL-FADISIPNSICFSPDGTTGYFV 165 (295)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEETTE----EEEE-EEEESSEEEEEECTTSCEEEEE
T ss_pred EEeeeecCCCcccceeeEECCCCC-EEEEeccccccccceeEeeecCCc----EEEE-eeccCCcceeeecCCCceEEEe
Confidence 111111111223689999999998 4444332 2234555554321 1222 11223468899999998 5566
Q ss_pred EeCCCcEEEEecCCCCC---CC--ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 384 GGDDGCIHVWDLRRFKK---GS--SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~---~~--~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
-+..+.|..+++..... ++ ....+....+....+++..+| ++.++.-..+.|..||-...
T Consensus 166 dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~G-nlWva~~~~g~V~~~dp~G~-------------- 230 (295)
T d2ghsa1 166 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGN-------------- 230 (295)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCC--------------
T ss_pred ecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCC-CEEeeeeCCCceEEecCCCc--------------
Confidence 66788899998753110 11 122333445567889999887 56666656778999996543
Q ss_pred CCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCC
Q psy4510 459 LPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSG 493 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~ 493 (812)
.+.........+++++|- |+...++++++..+
T Consensus 231 ---~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~~~ 263 (295)
T d2ghsa1 231 ---HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 263 (295)
T ss_dssp ---EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ---EeeEecCCCCceEEEEEeCCCCCEEEEEECCcC
Confidence 333344434568899996 56666777776543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.58 E-value=0.0011 Score=63.59 Aligned_cols=225 Identities=8% Similarity=0.020 Sum_probs=114.9
Q ss_pred eCCCC--CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CC-----ceEEeeCCCC
Q psy4510 184 WSSTE--PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PF-----QLAEHNKKRG 255 (812)
Q Consensus 184 ~sp~~--~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~-----~i~vwd~~~~ 255 (812)
.|| + |+.+|-.+ +|.|.+.|+.+++ .+.|..+.+.+...+|||||++||.... ++ .|.+++..++
T Consensus 6 ~sP-di~G~~v~f~~-~~dl~~~d~~~g~-----~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 6 LNP-DIHGDRIIFVC-CDDLWEHDLKSGS-----TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp EEE-EEETTEEEEEE-TTEEEEEETTTCC-----EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred cCC-CCCCCEEEEEe-CCcEEEEECCCCC-----EEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence 568 7 88877554 4678888998775 3456677788999999999999986542 22 3566666554
Q ss_pred CCCCCCCCCceEEc-------CCCCcEEEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 256 KGPGIPTPPLFSFS-------GHLTEGFAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 256 ~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
. ...+. ..........|+|++ ..|+..... ..+...+..... .. ..+....
T Consensus 79 ~--------~~~lt~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~ 142 (281)
T d1k32a2 79 E--------IKRITYFSGKSTGRRMFTDVAGFDPDG-NLIISTDAMQPFSSMTCLYRVENDGIN-----FV--PLNLGPA 142 (281)
T ss_dssp E--------EEECCCCCEEEETTEECSEEEEECTTC-CEEEEECTTSSSTTCCEEEEEEGGGTE-----EE--ECCSCSC
T ss_pred c--------eEEeeecCCCccCccccccccccCCCC-CEEEEEEccCCCccceeeeeecCCCce-----eE--EecCCcc
Confidence 1 12222 122345678999999 565554321 123344433322 11 1122222
Q ss_pred EEEEEcCCCCeEEEEEECCCe-----------EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC--Cc
Q psy4510 323 EDLQWSPGEKRVLASCSVDLS-----------IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--GC 389 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~-----------i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--g~ 389 (812)
..+ |.+++..+++....... ........ . ..... ...........++++. ++.....+ ..
T Consensus 143 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 215 (281)
T d1k32a2 143 THI-LFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNS---G-AFKKI-VDMSTHVSSPVIVGHR-IYFITDIDGFGQ 215 (281)
T ss_dssp SEE-EEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEET---T-EEEEE-ECCSSCCEEEEEETTE-EEEEECTTSSCE
T ss_pred cee-eecCCCeEEEeeccccceeeeeccCCcceeeeeccc---c-ceeec-cCCccccceeeeeccc-cceecccccccc
Confidence 333 33344333433322110 11111110 0 01111 1222334444555443 33333333 34
Q ss_pred EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|.++|+.. ..+..+..+.. .....|+|+|..++.+ .++.|.++|+.+++
T Consensus 216 l~~~d~~g----~~~~~lt~~~~-~~~~~~SpDG~~I~f~--~~~~l~~~d~~~g~ 264 (281)
T d1k32a2 216 IYSTDLDG----KDLRKHTSFTD-YYPRHLNTDGRRILFS--KGGSIYIFNPDTEK 264 (281)
T ss_dssp EEEEETTS----CSCEECCCCCS-SCEEEEEESSSCEEEE--ETTEEEEECTTTCC
T ss_pred eEEEeCCC----CceEEeecCCC-cccccCcCCCCEEEEE--eCCEEEEEECCCCC
Confidence 66777753 33344433222 2234689998765543 35789999998774
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.52 E-value=0.038 Score=51.68 Aligned_cols=226 Identities=8% Similarity=-0.032 Sum_probs=133.6
Q ss_pred CcEEEEccCCCCcccc-cccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 199 RNIHIWTPREAGAWQV-DQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~-~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
+.|+-.+++....... ....+..+...+.+|+|....+.|.-.+ ..+.|+..++... .....+......+.
T Consensus 10 ~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~-------~~~~v~~~~~~~p~ 82 (263)
T d1npea_ 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-------EPTTIIRQDLGSPE 82 (263)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC-------CCEEEECTTCCCEE
T ss_pred CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccC-------CcEEEEEecccccc
Confidence 4676666654432111 1122444555688899998888777664 5677888888763 22333333335678
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE--ECCCCCc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW--DTRVINT 354 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw--d~~~~~~ 354 (812)
+|++...+..+..+-...+.|.+.++...... ............++..|....++.+-...+..+|+ ++.. .
T Consensus 83 ~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~----~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG--~ 156 (263)
T d1npea_ 83 GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--T 156 (263)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--C
T ss_pred EEEEeccCCeEEEeccCCCEEEEEecCCceEE----EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCC--C
Confidence 88887666344455556789999998765421 11222335789999999888666554433343454 4442 2
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
..... . ...-...+.|++.+.++.|+.. ...+.|...++.. ......+.+.. ...+|++. +..+..+-...
T Consensus 157 ~~~~i-~-~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g---~~~~~v~~~~~-~P~~lav~--~~~lYwtd~~~ 228 (263)
T d1npea_ 157 NRRIL-A-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ---PGRRKVLEGLQ-YPFAVTSY--GKNLYYTDWKT 228 (263)
T ss_dssp CCEEE-E-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE---EEEEEEEECCC-SEEEEEEE--TTEEEEEETTT
T ss_pred Cceee-e-eecccccceEEEeecCcEEEEEeCCCCEEEEEECCC---CCeEEEECCCC-CcEEEEEE--CCEEEEEECCC
Confidence 11111 1 2233466899999887766544 4578899888863 11122223322 34578776 33455555566
Q ss_pred CCEEEEEcCCCC
Q psy4510 434 DQIALWDLAVER 445 (812)
Q Consensus 434 g~v~iwd~~~~~ 445 (812)
+.|...|..+.+
T Consensus 229 ~~I~~~~~~~g~ 240 (263)
T d1npea_ 229 NSVIAMDLAISK 240 (263)
T ss_dssp TEEEEEETTTTE
T ss_pred CEEEEEECCCCc
Confidence 788888887663
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.28 E-value=0.0027 Score=60.68 Aligned_cols=98 Identities=9% Similarity=0.010 Sum_probs=60.6
Q ss_pred eEcCC--CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-----cEEEEeC
Q psy4510 230 QWSDL--KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTP 302 (812)
Q Consensus 230 ~~s~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-----~i~vwd~ 302 (812)
..||+ |++++-.+ ++.|.+.++.++ ....+..+.+.+...+|||+|+.+.++...++ .|.+++.
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g--------~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~ 75 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSG--------STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG 75 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTC--------CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCC--------CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEe
Confidence 45688 99888664 456778888874 34567777788899999999944444443332 3666676
Q ss_pred CCCCcceecc--ccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 303 REAGAWQVDQ--KPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 303 ~~~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
..+....+.. ..............|+|+++.+++
T Consensus 76 ~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~ 111 (281)
T d1k32a2 76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 111 (281)
T ss_dssp TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred cCCceEEeeecCCCccCccccccccccCCCCCEEEE
Confidence 6654211100 001112234578899999995443
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.16 Score=47.25 Aligned_cols=205 Identities=10% Similarity=-0.057 Sum_probs=121.1
Q ss_pred CceEEEEeCCCCCCeE-EEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVL-ATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~l-at~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~ 254 (812)
..+.+++|.+ ..+.| .+=...+.|+--++............+......+.+||+...+..|..+. ..+.|.+.++..
T Consensus 30 ~~~~~id~d~-~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g 108 (266)
T d1ijqa1 30 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (266)
T ss_dssp SSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEEEe-CCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCC
Confidence 4577899998 55544 45455666766666543221112222333345677899988887776654 567799999876
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. .....+........+|+..|.. ++|.-.. ..+.|.-.++..... .......-...+.+++.+.++
T Consensus 109 ~-------~~~~~~~~~~~~P~~l~vd~~~-g~ly~~~~~~~~~I~r~~~dGs~~----~~l~~~~~~~p~gl~iD~~~~ 176 (266)
T d1ijqa1 109 V-------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSG 176 (266)
T ss_dssp S-------SEEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCCE----EEEECSSCSCEEEEEEETTTT
T ss_pred c-------eEEEEEcCCCCCcceEEEEccc-CeEEEeccCCCcceeEeccCCCce----ecccccccceeeEEEeecccc
Confidence 3 3333344455678899999976 5554443 334566666655431 111222335678999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.+..+-...+.|...++..... ..+... .........|++. .+.++.+-..++.|...+...
T Consensus 177 ~lYw~d~~~~~I~~~~~dG~~~-~~~~~~-~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~ 238 (266)
T d1ijqa1 177 RLYWVDSKLHSISSIDVNGGNR-KTILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (266)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEEEC-TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred EEEEecCCcCEEEEEECCCCCE-EEEEeC-CCcccccEEEEEE-CCEEEEEECCCCeEEEEECCC
Confidence 7777767788999999864322 122222 2222345667776 344555555677787777653
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.85 E-value=0.18 Score=46.75 Aligned_cols=166 Identities=7% Similarity=-0.072 Sum_probs=102.0
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+..+...+.+|+|.+....+..+-...+.|+..++...... ..+......+.++++..-+.++..+-...+.|.+.
T Consensus 31 ~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~----~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~ 106 (263)
T d1npea_ 31 LHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT----TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (263)
T ss_dssp EEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE----EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcE----EEEEeccccccEEEEeccCCeEEEeccCCCEEEEE
Confidence 44445567889999877344444456678988888765521 11222235688999987777666677778899999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCc--EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 424 (812)
++..... ..+..........++.+|...+++... ..+. |.--++.. ... .......-....+|++.+.+.
T Consensus 107 ~~dg~~~----~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG--~~~-~~i~~~~~~~P~glaiD~~~~ 179 (263)
T d1npea_ 107 KMDGTQR----RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNR-RILAQDNLGLPNGLTFDAFSS 179 (263)
T ss_dssp ETTSCSC----EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCC-EEEECTTCSCEEEEEEETTTT
T ss_pred ecCCceE----EEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCC--CCc-eeeeeecccccceEEEeecCc
Confidence 9874321 112123345688999999877555433 2223 44445532 222 222222334568999988765
Q ss_pred cEEEEEECCCCEEEEEcCCC
Q psy4510 425 STFASGGADDQIALWDLAVE 444 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~ 444 (812)
++..+-...+.|...++...
T Consensus 180 ~lYw~d~~~~~I~~~~~~g~ 199 (263)
T d1npea_ 180 QLCWVDAGTHRAECLNPAQP 199 (263)
T ss_dssp EEEEEETTTTEEEEEETTEE
T ss_pred EEEEEeCCCCEEEEEECCCC
Confidence 45555556778888888765
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.84 E-value=0.18 Score=46.48 Aligned_cols=232 Identities=14% Similarity=0.185 Sum_probs=143.2
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+-.+| ..+.||.-+ ..++.|||+++.++. +... ...+|.-=.|-.+.. |+-. .+..+.=|+++..
T Consensus 68 AIMhP-~~~IiALra-g~~LQiFnletK~kl----ks~~-~~e~VvfWkWis~~~-L~lV-T~taVYHW~~~g~------ 132 (327)
T d1utca2 68 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKM----KAHT-MTDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 132 (327)
T ss_dssp EEECS-SSSEEEEEE-TTEEEEEETTTTEEE----EEEE-CSSCCCEEEESSSSE-EEEE-CSSEEEEEESSSS------
T ss_pred hhcCC-CCcEEEEec-CCeEEEEehhHhhhh----ceEE-cCCCcEEEEecCCCE-EEEE-cCCceEEEcccCC------
Confidence 44667 778887766 358999999887632 1111 123565566655443 3332 3467999999653
Q ss_pred CCCceEEcCCC----CcEEEEEecCCCCCEEEEE------eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-
Q psy4510 262 TPPLFSFSGHL----TEGFAMDWSSTEPGVLATG------DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG- 330 (812)
Q Consensus 262 ~~~~~~~~~h~----~~v~~l~~sp~~~~~l~sg------~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~- 330 (812)
..|...+..|. ..|..-..+++.+-++++| .-.|.+.+|..+... .+.+.||.+....+...-+
T Consensus 133 s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~ 207 (327)
T d1utca2 133 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNA 207 (327)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-----EEEECCSEEEEEEECCTTCS
T ss_pred CCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-----CccccceeeeeEEEEcCCCC
Confidence 46888887765 4677888888885455555 224788999988763 6778888766555544322
Q ss_pred -CCeEEEEEEC---CCeEEEEECCCCCcc-cc----eeec---CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 331 -EKRVLASCSV---DLSIRIWDTRVINTK-SC----MLTL---PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 331 -~~~~l~s~~~---dg~i~iwd~~~~~~~-~~----~~~~---~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
...+|+-+.. .+.+.|-++...... .. ...+ +.+...--.++..++.-.+++.-+.-|.|++||+.
T Consensus 208 ~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDle-- 285 (327)
T d1utca2 208 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 285 (327)
T ss_dssp SCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETT--
T ss_pred CCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcc--
Confidence 2234444432 368889988753321 11 1111 12223445678888877788888999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~ 437 (812)
++.++..-+--...|..-+-+.... =+++...+|+|.
T Consensus 286 -Tgt~i~~nRIs~~~iF~~a~~~~~~-Gi~~VNr~GqVl 322 (327)
T d1utca2 286 -TGTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVL 322 (327)
T ss_dssp -TCCEEEEEECCSSCEEEEEEETTTT-EEEEEETTSEEE
T ss_pred -cccEEEEeecCCCceEEeccCCCCc-eEEEECCCCeEE
Confidence 5777776665566665444443322 344444666554
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.25 Score=45.88 Aligned_cols=184 Identities=11% Similarity=0.018 Sum_probs=110.6
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
..|+..++.+. ....+......+.+|+|.+....+..+-...+.|.-.++...................+..
T Consensus 10 ~~I~~~~l~~~--------~~~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g 81 (266)
T d1ijqa1 10 HEVRKMTLDRS--------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (266)
T ss_dssp SSEEEEETTSC--------CCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CeEEEEECCCC--------cceeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence 34777777653 2233334556778999998873344444456677777765432111111222223356778
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCCC
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~ 402 (812)
+++.+.+.++..+-...+.|.+.++.... ..... .........++.+|...+|+... ..+.|.-.++. +.
T Consensus 82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~---~~~~~-~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~d----Gs 153 (266)
T d1ijqa1 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN----GV 153 (266)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT----SC
T ss_pred EEEeeccceEEEEecCCCEEEeEecCCce---EEEEE-cCCCCCcceEEEEcccCeEEEeccCCCcceeEeccC----CC
Confidence 99988888777777788899999987432 11222 33445678899998665444433 34556666664 33
Q ss_pred ceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 403 SVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 403 ~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
....+ ...-....++++.+.+.++..+-...+.|...++...
T Consensus 154 ~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~ 196 (266)
T d1ijqa1 154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (266)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCC
Confidence 33333 2334567899999877555566566788888888665
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.51 E-value=0.64 Score=48.53 Aligned_cols=75 Identities=8% Similarity=-0.021 Sum_probs=46.9
Q ss_pred CCceEEEEecCCCceeEEE---------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccc-cCCCcceeEeEEecC
Q psy4510 677 CKRNIHIWTPREAGAWSVY---------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~~~~---------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~gH~~~V~~l~fs~d 746 (812)
..|.|.-+|+.+|++.=.. ..+..+.+|++|+.||.++.+|.++|+. +-.+ .+....-.-+.|..|
T Consensus 442 ~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~----lW~~~l~~~~~a~P~ty~~d 517 (571)
T d2ad6a1 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE----LWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcE----EEEEECCCCceecceEEEEC
Confidence 3467777777776653221 1233567888899999999999999985 2111 111111222677779
Q ss_pred CceeEEeec
Q psy4510 747 EKRVLASCS 755 (812)
Q Consensus 747 g~~~L~s~s 755 (812)
|++|++...
T Consensus 518 GkqYi~v~~ 526 (571)
T d2ad6a1 518 GKQYIGSMY 526 (571)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 998886543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.44 E-value=0.3 Score=48.27 Aligned_cols=74 Identities=12% Similarity=0.168 Sum_probs=43.3
Q ss_pred EEEEEcCCCCEEEEEeCCC-----------cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC-CCEE
Q psy4510 370 NVISWNRTEPLIVSGGDDG-----------CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD-DQIA 437 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg-----------~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~v~ 437 (812)
.......+|++++.|+.+. .+.+||+....-.........|.....+..+.+++ .+++.|+.+ ..+.
T Consensus 23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g-~i~v~Gg~~~~~~~ 101 (387)
T d1k3ia3 23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG-QIVVTGGNDAKKTS 101 (387)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS-CEEEECSSSTTCEE
T ss_pred EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCC-cEEEeecCCCccee
Confidence 3444455677777776421 36789997532111111122233333456788886 577777654 5899
Q ss_pred EEEcCCC
Q psy4510 438 LWDLAVE 444 (812)
Q Consensus 438 iwd~~~~ 444 (812)
+||..+.
T Consensus 102 ~yd~~~~ 108 (387)
T d1k3ia3 102 LYDSSSD 108 (387)
T ss_dssp EEEGGGT
T ss_pred EecCccC
Confidence 9998776
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.35 E-value=0.11 Score=50.78 Aligned_cols=85 Identities=5% Similarity=-0.038 Sum_probs=54.2
Q ss_pred ceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCC
Q psy4510 588 GCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST 667 (812)
Q Consensus 588 ~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~ 667 (812)
.....+.++|||++++++ +.-+.++.|+|+..-...+..... +...+..-....-....-+|..
T Consensus 275 KsPHGV~vSPDGKyi~Va-GKLs~tVSViD~~Ki~~~~~~~~~--------------~~~~~~~e~elglgPLht~fd~- 338 (459)
T d1fwxa2 275 NNPHGCNMAPDKKHLCVA-GKLSPTVTVLDVTRFDAVFYENAD--------------PRSAVVAEPELGLGPLHTAFDG- 338 (459)
T ss_dssp SSCCCEEECTTSSEEEEE-CTTSSBEEEEEGGGHHHHHHSCC---------------GGGGEEECCBCCSCEEEEEECT-
T ss_pred CCCCceEECCCCCEEEEe-CCcCCcEEEEEehhhhhhhcccCC--------------ccccEEeecccCcCccccccCC-
Confidence 345678999999999886 367899999999765432211100 0001111111233556678887
Q ss_pred CCCeEEecCCCceEEEEecCC
Q psy4510 668 EPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~ 688 (812)
.|....|---|..|.-|++..
T Consensus 339 ~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 339 RGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp TSEEEEEETTTTEEEEEEHHH
T ss_pred CceEEEEeeccceEEEEecch
Confidence 666666777899999999964
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.12 E-value=0.82 Score=45.78 Aligned_cols=215 Identities=11% Similarity=0.041 Sum_probs=107.9
Q ss_pred CCCCCeeeeeEcCCCCcEEEe-eCC----CceEEeeCCCCCCCCCCCCCc-eEEcCCCCcEEEEEecCCCCCEEEEEeC-
Q psy4510 221 GHTNSAEDLQWSDLKTALQTV-DDP----FQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGDC- 293 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~-~~d----~~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~l~sg~~- 293 (812)
++.-.+..+++||++++++.+ +.. ..+++.|+.++ +.+ ..+.. .....++|++++..++.+.-.
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg-------~~~~~~i~~--~~~~~~~W~~D~~~~~Y~~~~~ 192 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA-------KELPDVLER--VKFSCMAWTHDGKGMFYNAYPQ 192 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT-------EEEEEEEEE--ECSCCEEECTTSSEEEEEECCC
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccCcc-------eeccccccc--ccccceEEcCCCCEEEEEEecc
Confidence 344445567889999988743 333 35999999986 222 12211 112468899998555554321
Q ss_pred --------------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC--CCeEEEE--ECCCCCcc
Q psy4510 294 --------------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV--DLSIRIW--DTRVINTK 355 (812)
Q Consensus 294 --------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iw--d~~~~~~~ 355 (812)
...|..+.+.+.................+..+..+++++.++++... ++...+| |+......
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~ 272 (430)
T d1qfma1 193 QDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG 272 (430)
T ss_dssp CSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSS
T ss_pred ccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccc
Confidence 22577888877653222222222233456778889999976665543 3334444 54422111
Q ss_pred c----ceeecCCcCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 356 S----CMLTLPNAHTSDVNVISWNRTEPLIVSGG---DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 356 ~----~~~~~~~~~~~~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
. ....+.......+.-+. +..+.+++... .++.|...++...........+..+...+..-.+...+..+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl 351 (430)
T d1qfma1 273 ITGILKWVKLIDNFEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVL 351 (430)
T ss_dssp SCSSCCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred cccccceeEeecccccceEEEe-cCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEE
Confidence 0 00111112223333332 22233333332 2466777777653221112223334555554444443333444
Q ss_pred EEECCC--CEEEEEcCCCC
Q psy4510 429 SGGADD--QIALWDLAVER 445 (812)
Q Consensus 429 s~~~dg--~v~iwd~~~~~ 445 (812)
..-.++ +|+++++..+.
T Consensus 352 ~~~~~~~~~l~v~~~~~~~ 370 (430)
T d1qfma1 352 CYLHDVKNTLQLHDLATGA 370 (430)
T ss_dssp EEEETTEEEEEEEETTTCC
T ss_pred EEEcCCEeEEEEEECCCCc
Confidence 444554 57888887663
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.07 E-value=0.15 Score=50.53 Aligned_cols=112 Identities=9% Similarity=0.034 Sum_probs=66.1
Q ss_pred ecCCCCCEEEEEeCCC-----------cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC-CeEEEE
Q psy4510 280 WSSTEPGVLATGDCKR-----------NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-LSIRIW 347 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-g~i~iw 347 (812)
...++ ++++.|+.+. .+.+||+.++. |.........|.......++.+++. +++.|+.+ ..+.+|
T Consensus 27 ~~~~g-kv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~-i~v~Gg~~~~~~~~y 103 (387)
T d1k3ia3 27 EPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLY 103 (387)
T ss_dssp ETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEE
T ss_pred EeeCC-EEEEEEeecCcccCCCCCceeEEEEEECCCCc-EeecCCCCCCcccceeEEEEecCCc-EEEeecCCCcceeEe
Confidence 34455 6666666421 37799998874 3221111223333345667889998 67777654 589999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEecCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD------GCIHVWDLRR 397 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~ 397 (812)
|..+.. ....... .....-.+.+..++|++++.|+.. ..+.+||..+
T Consensus 104 d~~~~~-w~~~~~~--~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~ 156 (387)
T d1k3ia3 104 DSSSDS-WIPGPDM--QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 156 (387)
T ss_dssp EGGGTE-EEECCCC--SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cCccCc-ccccccc--cccccccceeeecCCceeeeccccccccccceeeeecCCC
Confidence 987532 1112222 112223456677889988888753 3588999874
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.66 E-value=1.3 Score=44.33 Aligned_cols=251 Identities=13% Similarity=0.032 Sum_probs=125.8
Q ss_pred ceEEEEeCCCCCCeEEEe-----cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC--------
Q psy4510 178 EGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-------- 244 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~-----~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-------- 244 (812)
.+..+++|| ++++||.+ +....|+++|+.+++.... .+. ......++|+++++.|.-...+
T Consensus 126 ~~~~~~~Sp-d~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~---~i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~ 199 (430)
T d1qfma1 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPD---VLE--RVKFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (430)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEE---EEE--EECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred eecceEecC-CCCEEEEEeccccCchheeEEeccCcceeccc---ccc--cccccceEEcCCCCEEEEEEeccccCcccc
Confidence 344567899 99988843 3345689999998863211 111 1123578999999988654322
Q ss_pred --------CceEEeeCCCCCCCCCCCCCceEEcCCC--CcEEEEEecCCCCCEEEEEe--CCCcEEEE--eCCCCCccee
Q psy4510 245 --------FQLAEHNKKRGKGPGIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGD--CKRNIHIW--TPREAGAWQV 310 (812)
Q Consensus 245 --------~~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~~~l~sg~--~dg~i~vw--d~~~~~~~~~ 310 (812)
..+..+.+.+. .......+.... ..+..+..++++..++++.. .++...+| ++........
T Consensus 200 ~~~~~~~~~~v~~h~lgt~-----~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~ 274 (430)
T d1qfma1 200 TETSTNLHQKLYYHVLGTD-----QSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT 274 (430)
T ss_dssp SCCCCCCCCEEEEEETTSC-----GGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC
T ss_pred cccccCCcceEEEEECCCC-----ccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccc
Confidence 24666666553 122233343332 34667778888844444333 23344444 4433221000
Q ss_pred c---ccc-ccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 311 D---QKP-LVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 311 ~---~~~-~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
. ... .......+.-+. + .+..+++... .++.|...++....... ...+...+...+..-.+...+.+|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~-w~~vi~~~~~~~~~~~~~~~~~~lvl 351 (430)
T d1qfma1 275 GILKWVKLIDNFEGEYDYVT-N-EGTVFTFKTNRHSPNYRLINIDFTDPEESK-WKVLVPEHEKDVLEWVACVRSNFLVL 351 (430)
T ss_dssp SSCCCEEEECSSSSCEEEEE-E-ETTEEEEEECTTCTTCEEEEEETTBCCGGG-CEEEECCCSSCEEEEEEEETTTEEEE
T ss_pred cccceeEeecccccceEEEe-c-CCceeecccCcccccceeEEecCCCCcccc-ceEEecccCcceeeeEEEEECCEEEE
Confidence 0 011 111122222222 2 2332344332 24677777776543221 12222344555554444444555554
Q ss_pred E-eCCC--cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCCC
Q psy4510 384 G-GDDG--CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVER 445 (812)
Q Consensus 384 g-~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~~ 445 (812)
. -.++ .|+++++.. +.....+....+.|..+...+....+.++-+. -.++..+|+.++.
T Consensus 352 ~~~~~~~~~l~v~~~~~---~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 352 CYLHDVKNTLQLHDLAT---GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EEEETTEEEEEEEETTT---CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEcCCEeEEEEEECCC---CcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 4 4454 478888863 33333333334556666555554444444332 2567778887763
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=94.78 E-value=1.9 Score=41.26 Aligned_cols=164 Identities=7% Similarity=0.007 Sum_probs=91.1
Q ss_pred EEEEecCCCCCEEEEEe------------CCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEE--cCCCCeEEEE
Q psy4510 276 FAMDWSSTEPGVLATGD------------CKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQW--SPGEKRVLAS 337 (812)
Q Consensus 276 ~~l~~sp~~~~~l~sg~------------~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~--~p~~~~~l~s 337 (812)
..|...|++ ..+++++ ..|.|.++|+.+.............. .-....+.. .+++...|++
T Consensus 38 EDi~~~~dg-~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v 116 (340)
T d1v04a_ 38 EDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 116 (340)
T ss_dssp CEEEECTTS-EEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred ceEEECCCC-cEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence 357777876 3333332 14889999988765322111111000 011223332 4566655555
Q ss_pred EE---CCCeEEEEECCCCCc-ccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---------------CCcEEEEecCCC
Q psy4510 338 CS---VDLSIRIWDTRVINT-KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---------------DGCIHVWDLRRF 398 (812)
Q Consensus 338 ~~---~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---------------dg~i~iwd~~~~ 398 (812)
.. ...+|-+|++..... ...+.++........+.+++..++.+++|-.. -+...+|....
T Consensus 117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~- 195 (340)
T d1v04a_ 117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 195 (340)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS-
T ss_pred EeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcC-
Confidence 53 356788888754321 12223333334456789999888888887311 12234444431
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+ ........-..-+.|+++|++..++++-+..++|++|++...
T Consensus 196 --~-~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~ 238 (340)
T d1v04a_ 196 --N-DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN 238 (340)
T ss_dssp --S-CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred --C-ceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence 1 122222233457899999998767777777889999998755
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.34 E-value=1.9 Score=39.52 Aligned_cols=252 Identities=9% Similarity=0.091 Sum_probs=143.6
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
...|.|.|+.+ ...+...-..- -+.-.+|.. .+||.-+ ..++.++|+.+. +.+..
T Consensus 44 ~~~VvIidl~n--~~~~~Rrpi~A----dsAIMhP~~-~IiALra-g~~LQiFnletK-----------------~klks 98 (327)
T d1utca2 44 QAQVVIIDMND--PSNPIRRPISA----DSAIMNPAS-KVIALKA-GKTLQIFNIEMK-----------------SKMKA 98 (327)
T ss_dssp EEEEEEEETTS--TTSCEEEECCC----SEEEECSSS-SEEEEEE-TTEEEEEETTTT-----------------EEEEE
T ss_pred CceEEEEECCC--CCcceecccch----hhhhcCCCC-cEEEEec-CCeEEEEehhHh-----------------hhhce
Confidence 45799999985 33344332211 234467875 5777766 468999999998 66777
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC---CCCeeEEEEcCCCCCeEEEee-CCCceEEE
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG---QKEIKELHWHPQLPGTIISTA-NSGFNIFR 542 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~p~~~~~~i~~~-~~~~~~~~ 542 (812)
+....+|.--.|-.. ..++-.....+.-|.......+..++.... ...|.....+++..+.++..- .....+..
T Consensus 99 ~~~~e~VvfWkWis~--~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G 176 (327)
T d1utca2 99 HTMTDDVTFWKWISL--NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 176 (327)
T ss_dssp EECSSCCCEEEESSS--SEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred EEcCCCcEEEEecCC--CEEEEEcCCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeE
Confidence 777777877777665 567777777777776534333444443332 257888888888776655432 22233444
Q ss_pred EeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccC---CeEEEEe-ecCcceEEEEec
Q psy4510 543 TISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYG---STTLAGV-WGEVGKVGIWDL 618 (812)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g---~~l~~~~-~~~dg~I~iwd~ 618 (812)
.+.+.... ....+.+.+|.+.-..+.+.-.. +.++.+. +...++++|-++
T Consensus 177 ~mQLYS~e--------------------------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEi 230 (327)
T d1utca2 177 AMQLYSVD--------------------------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 230 (327)
T ss_dssp EEEEEETT--------------------------TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEec--------------------------cCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEc
Confidence 44444321 22355677776655554432211 1222221 134478888888
Q ss_pred cccccccCCcccccccccccCCCCCCCCCCeee---ecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE
Q psy4510 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS---FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~ 695 (812)
....... .+. ..+.... -..-.+-..++..|+ .-.++..-+.-|.|.++|+++|..+-..
T Consensus 231 g~~~~g~-~~f---------------~kk~vdi~fppea~~DFPvamqvs~-kygiiyviTK~G~i~lyDleTgt~i~~n 293 (327)
T d1utca2 231 GTPPTGN-QPF---------------PKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMN 293 (327)
T ss_dssp SCCCTTC-CCC---------------CCEEEECCCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCccCC-CCC---------------cceeEEEECCccccCCcEEEEEeec-cCCEEEEEecCcEEEEEEcccccEEEEe
Confidence 7642100 000 0000101 112234556777777 5557777777788888888887777776
Q ss_pred EecCCCCEEEeec
Q psy4510 696 LYTNRFGVLATGD 708 (812)
Q Consensus 696 ~~s~dg~~lasgs 708 (812)
.+|++.-++++..
T Consensus 294 RIs~~~iF~~a~~ 306 (327)
T d1utca2 294 RISGETIFVTAPH 306 (327)
T ss_dssp ECCSSCEEEEEEE
T ss_pred ecCCCceEEeccC
Confidence 6676665555543
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.20 E-value=3.2 Score=42.86 Aligned_cols=21 Identities=10% Similarity=-0.064 Sum_probs=18.2
Q ss_pred cEEEEEECCCCEEEEEcCCCC
Q psy4510 425 STFASGGADDQIALWDLAVER 445 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.++++|+.|+.++.+|.++++
T Consensus 476 glVf~G~~dg~l~A~Da~tGe 496 (571)
T d2ad6a1 476 GLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEECCCCeEEEEECCCCc
Confidence 377789999999999999984
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=93.31 E-value=3.6 Score=39.16 Aligned_cols=188 Identities=11% Similarity=0.072 Sum_probs=97.5
Q ss_pred eeeEcCCCCcEEEee------------CCCceEEeeCCCCCCCCCCCCCceEEcCCC-----CcEEEEEe--cCCCCCEE
Q psy4510 228 DLQWSDLKTALQTVD------------DPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-----TEGFAMDW--SSTEPGVL 288 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~--sp~~~~~l 288 (812)
.|+..|+|..+++++ ..|.|.++|+++.. .......+.+.. -.-..+.. .+++..+|
T Consensus 39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~----~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L 114 (340)
T d1v04a_ 39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE----PAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 114 (340)
T ss_dssp EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSS----CCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEE
T ss_pred eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCC----CcceEEEecCCCCCCcceeccceeEEEcCCCcEEE
Confidence 344456666555543 24888889987641 001111112111 11233333 45564456
Q ss_pred EEEe---CCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEE-----------------CCCeEEEE
Q psy4510 289 ATGD---CKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCS-----------------VDLSIRIW 347 (812)
Q Consensus 289 ~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~-----------------~dg~i~iw 347 (812)
++.. ...+|.+|++............+.. .....+++.+..++. +++|-. .-+.+.-|
T Consensus 115 ~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~-fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~ 193 (340)
T d1v04a_ 115 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 193 (340)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCCSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCC-EEEecCccCcChhhhhhhHhhcCCceeEEEE
Confidence 6653 3567889988665432222222222 234678999998887 566621 11234444
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|.. . .... ...-...+.|+++|++++| ++-+..+.|++|++............ .-.+..-.+.+.+.+..+
T Consensus 194 ~~~--~----~~~~-~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~-~l~~~pDNi~~d~~~g~l 265 (340)
T d1v04a_ 194 SPN--D----VRVV-AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDL 265 (340)
T ss_dssp CSS--C----EEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCE
T ss_pred cCC--c----eEEE-cCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEe-cCCCCCCccEEecCCCEE
Confidence 432 1 1111 1223568999999999844 55566789999999742211111121 123445667776644333
Q ss_pred EE
Q psy4510 427 FA 428 (812)
Q Consensus 427 l~ 428 (812)
.+
T Consensus 266 wv 267 (340)
T d1v04a_ 266 WV 267 (340)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=93.29 E-value=1.4 Score=45.76 Aligned_cols=74 Identities=12% Similarity=0.188 Sum_probs=48.0
Q ss_pred CceEEEEecCCCceeEE-E--------EecCCCCEEEeecCCCeEEEeecCCCCCc-ccccccccCCCcceeEeEEecCC
Q psy4510 678 KRNIHIWTPREAGAWSV-Y--------LYTNRFGVLATGDCKRNIHIWTPREAGAW-QVDQKPLVGHTNSVEDLQWSPGE 747 (812)
Q Consensus 678 Dg~v~iWd~~~~~~~~~-~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~-~~~~~~~~gH~~~V~~l~fs~dg 747 (812)
.|.|.-||+.+|++.=. . .++-.|.+|++|+.||.++.+|..+|+.+ + ...-.+..+. -+.|..+|
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~--~~l~~~~~~~--P~ty~~dG 512 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ--FEAQSGIVAA--PMTFELAG 512 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE--EECSSCCCSC--CEEEEETT
T ss_pred ccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEE--EECCCCcccc--CEEEEECC
Confidence 36788899998776422 2 23345678889999999999999999851 1 0111111111 25677899
Q ss_pred ceeEEeec
Q psy4510 748 KRVLASCS 755 (812)
Q Consensus 748 ~~~L~s~s 755 (812)
++||+..+
T Consensus 513 kqyv~v~a 520 (560)
T d1kv9a2 513 RQYVAIMA 520 (560)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88877544
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=93.10 E-value=3.8 Score=38.91 Aligned_cols=229 Identities=10% Similarity=0.087 Sum_probs=122.7
Q ss_pred CCCCCCCccCcCCCCCceEEEEeCCC--CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEc------C
Q psy4510 162 PGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWS------D 233 (812)
Q Consensus 162 ~~~~~~~i~~~~gh~~~i~~~~~sp~--~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s------~ 233 (812)
|..+..++... |...-=-++=++|. ...+++...+.+-|++||++... +..+. .+.+..+..- .
T Consensus 12 a~~ET~pV~~~-gDaADDPAIW~n~~~p~~SlI~gTdK~~Gl~vYdL~G~~-----l~~~~--~Gr~NNVDvr~~~~l~~ 83 (353)
T d1h6la_ 12 AAAETEPVDTA-GDAADDPAIWLDPKNPQNSKLITTNKKSGLAVYSLEGKM-----LHSYH--TGKLNNVDIRYDFPLNG 83 (353)
T ss_dssp CSEECCCCSSC-SSCEEEEEEECCSSCGGGCEEEEEETTSCCEEEETTCCE-----EEECC--SSCEEEEEEEEEEEETT
T ss_pred eeeccCCCCCC-CCccCCceEEcCCCCcCccEEEEEcCcCCEEEEcCCCcE-----EEecc--cCCcCccccccccccCC
Confidence 44444455544 44322223333442 44566666667679999996432 22222 2344444432 2
Q ss_pred CCCcEEEeeC--C--CceEEeeCCCCCCCCCCCCCceEEcC-------CCCcEEEEEe--cCCCC-CEEEEEeCCCcEEE
Q psy4510 234 LKTALQTVDD--P--FQLAEHNKKRGKGPGIPTPPLFSFSG-------HLTEGFAMDW--SSTEP-GVLATGDCKRNIHI 299 (812)
Q Consensus 234 ~~~~l~s~~~--d--~~i~vwd~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~--sp~~~-~~l~sg~~dg~i~v 299 (812)
...-++.++. + ..|.+|.+... ...+..+.. -...++++|+ ++... .++++...+|.+..
T Consensus 84 ~~~di~vasnR~~~~~~l~~~~id~~------~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q 157 (353)
T d1h6la_ 84 KKVDIAAASNRSEGKNTIEIYAIDGK------NGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQ 157 (353)
T ss_dssp EEEEEEEEEECCTTTCEEEEEEEETT------TTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEE
T ss_pred cceEEEEEeCCcCcceeEEEEEecCc------ccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEE
Confidence 2334555552 2 35778877642 122222221 1234667776 66542 35777788999999
Q ss_pred EeCCCCCc---ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC--cccceeecCC-cCCCCeEEEE
Q psy4510 300 WTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN--TKSCMLTLPN-AHTSDVNVIS 373 (812)
Q Consensus 300 wd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~-~~~~~v~~l~ 373 (812)
|.+..... .....+.+. -...+..|.+.+.... |..+-.+..|..++..... ....+..... .....+-.|+
T Consensus 158 ~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~~-LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGla 235 (353)
T d1h6la_ 158 YELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYGS-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLT 235 (353)
T ss_dssp EEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTTE-EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEE
T ss_pred EEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCCc-EEEecCccceEEEEeccCCCccceeeecccCccccCCccccE
Confidence 88743321 112233333 3457999999998885 6777777766666654221 1111212211 2356788887
Q ss_pred EcC--CCC--EEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 374 WNR--TEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 374 ~~~--~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
.-. ++. +|++.-.+++..|||... ....+..|+
T Consensus 236 iy~~~~~~GylivSsQG~n~f~vydr~~--~~~~~g~F~ 272 (353)
T d1h6la_ 236 IYYAADGKGYLLASSQGNSSYAIYERQG--QNKYVADFQ 272 (353)
T ss_dssp EEECGGGCEEEEEEEGGGTEEEEEESST--TCCEEEEEE
T ss_pred EEEcCCCCeEEEEEcCCCCeEEEEecCC--CccccceEE
Confidence 653 333 555555678999999864 234454443
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.90 E-value=4.3 Score=39.00 Aligned_cols=178 Identities=7% Similarity=-0.064 Sum_probs=99.0
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCC---------CcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREA---------GAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~---------~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
-++.++ ...++|.|+.++ ++|-.+..- ........ .-..|..++|+.+ .|+.. .++.+..++
T Consensus 41 LLAVsn-~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~----~ip~v~~vafs~d--~l~v~-~~~~l~~~~ 111 (381)
T d1xipa_ 41 NLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK----EIPDVIFVCFHGD--QVLVS-TRNALYSLD 111 (381)
T ss_dssp CEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE----ECTTEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred eEEEeC-CCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceecc----CCCCeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence 477888 778888888775 667653211 11000111 1125888999755 34443 456677777
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc--ccccCCCCCEEEEEEcC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~--~~~~~h~~~v~~~~~~p 329 (812)
...- ........-...+..+.++|. .++....++.+.++++.......... ..+. -.+.+.+++|++
T Consensus 112 ~~~l-------~~~~~~~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~-~~~~~~~v~ws~ 180 (381)
T d1xipa_ 112 LEEL-------SEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQLAQNVTSFD-VTNSQLAVLLKD 180 (381)
T ss_dssp SSST-------TCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEEEEESEEEEE-ECSSEEEEEETT
T ss_pred eecc-------ccccccccccccccceecCCc---eeEEEecCCCEEEEEeccCccccccCCcceEE-ecCCceEEEEeC
Confidence 6652 333333334567888999884 55666678999999998876321110 0111 235678888888
Q ss_pred CCCeEEEEEECCCeEEEE-ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 330 GEKRVLASCSVDLSIRIW-DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
.+.. ++++..++ ..+- ++. ....+.. +......|.+|.|-.+..++++-
T Consensus 181 kgkq-~v~~~g~~-~q~k~~i~---~~~~~~~-p~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 181 RSFQ-SFAWRNGE-MEKQFEFS---LPSELEE-LPVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp SCEE-EEEEETTE-EEEEEEEC---CCHHHHT-SCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEE-EEEeCCCc-eeeccCCC---CccccCC-CcCCCcceeEEEEecCceEEEEE
Confidence 8774 55553322 2211 221 1111111 12234568899999766555443
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=92.89 E-value=2.5 Score=36.21 Aligned_cols=221 Identities=13% Similarity=0.144 Sum_probs=106.3
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
+.++|+++...|.|.++-+..++...........-..+-..+.|-+--+-+.-|-.-+.+.+-+++.. ..-+.
T Consensus 25 ~d~ll~~~~seG~vni~~l~g~~~vkLtkePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~-------GEE~~ 97 (313)
T d2hu7a1 25 GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRP-------GEEQR 97 (313)
T ss_dssp TTEEEEEEEETTEEEEEEESSSSCEECCSSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTST-------TCEEE
T ss_pred CCcEEEEEeccceEEEEEEeCCEEEEEecccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCC-------CeeeE
Confidence 44588888778999999887766322111111111111001111000000000111223344444321 11122
Q ss_pred EcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE--------EEcCCCCeEEEEE
Q psy4510 268 FSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL--------QWSPGEKRVLASC 338 (812)
Q Consensus 268 ~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~--------~~~p~~~~~l~s~ 338 (812)
+.... -.|.+++.. ++...++|+......+|-++.++... ...+. .-+-|+++ -+-..++.-|+++
T Consensus 98 i~spk~vRI~S~~yd--dk~vvF~Gased~~~LYviegGklrk--L~~vP-pFsFVtDI~~d~I~G~g~~~g~~~sfF~a 172 (313)
T d2hu7a1 98 LEAVKPMRILSGVDT--GEAVVFTGATEDRVALYALDGGGLRE--LARLP-GFGFVSDIRGDLIAGLGFFGGGRVSLFTS 172 (313)
T ss_dssp CTTSCSBEEEEEEEC--SSCEEEEEECSSCEEEEEEETTEEEE--EEEES-SCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred ecCCceEEEEEeeec--CceEEEecccCCceEEEEEeCCceee--eccCC-CcceEEeccCCeEEEEeeecCCcceEEEE
Confidence 22222 345566654 44789999998889999988775211 11111 11234443 2222222223344
Q ss_pred EC-CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEecCCCCCCCceEEccc-----
Q psy4510 339 SV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWDLRRFKKGSSVATFKH----- 409 (812)
Q Consensus 339 ~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~----- 409 (812)
.. .|.++|++.. .+.++.....+..+. +++-. .....-+|++. + ....+.-
T Consensus 173 dl~SG~lri~tpk---------------eGS~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s---~-~yerve~P~kd~ 232 (313)
T d2hu7a1 173 NLSSGGLRVFDSG---------------EGSFSSASISPGMKV-TAGLETAREARLVTVDPRD---G-SVEDLELPSKDF 232 (313)
T ss_dssp ETTTEEEEEECCS---------------SEEEEEEEECTTSCE-EEEEEESSCEEEEEECTTT---C-CEEECCCSSCHH
T ss_pred ecccCCEEEecCC---------------CCcccceeEccCcee-eeccCCCCceEEEEEeccc---C-ceeeeecCcccc
Confidence 33 5555555543 344566666665544 43322 12223447653 1 1222211
Q ss_pred ---CCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 410 ---HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 410 ---h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
..-.|+-+-+.|++ ++++.+-.||.-+++.-
T Consensus 233 ~sy~p~~I~~~~Y~Pdd-~L~iiakrdG~s~lF~n 266 (313)
T d2hu7a1 233 SSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 266 (313)
T ss_dssp HHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred eeecceEEEeeeeCCCC-cEEEEEecCCchheeec
Confidence 12356667789997 57788889999988874
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=91.72 E-value=5.7 Score=37.66 Aligned_cols=200 Identities=12% Similarity=0.073 Sum_probs=114.1
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC----CCC-CEEEEEeC-C---CcEEEEeCC
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS----TEP-GVLATGDC-K---RNIHIWTPR 303 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp----~~~-~~l~sg~~-d---g~i~vwd~~ 303 (812)
|...+++.....+-|.+||++. +.+..+. .+.+..+..-. .+. .-++.++. + .+|.+|.+.
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~G--------~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id 107 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLEG--------KMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETTC--------CEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEE
T ss_pred cCccEEEEEcCcCCEEEEcCCC--------cEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEec
Confidence 4556677777777799999964 4444443 35555555432 221 22444442 2 358888876
Q ss_pred CCCcceecc----ccccCCCCCEEEEEE--cCC-CCeEEEEEECCCeEEEEECCCCCcc----cceeecCCcCCCCeEEE
Q psy4510 304 EAGAWQVDQ----KPLVGHTNSVEDLQW--SPG-EKRVLASCSVDLSIRIWDTRVINTK----SCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 304 ~~~~~~~~~----~~~~~h~~~v~~~~~--~p~-~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~v~~l 372 (812)
......... .....-...+..+|+ ++. +..+++....+|.+..|.+...... ..++.+ .-...+..|
T Consensus 108 ~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f--~~~~q~EGC 185 (353)
T d1h6la_ 108 GKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF--KMNSQTEGM 185 (353)
T ss_dssp TTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE--ECSSCEEEE
T ss_pred CcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc--CCCCccceE
Confidence 433211000 111111234677777 665 4444666777899998877432221 223333 335678899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCC--CCCceEEcc--cCCCCEEEEEEcc--CCC-cEEEEEECCCCEEEEEcCCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFK--KGSSVATFK--HHTAPVTTVEWHP--TES-STFASGGADDQIALWDLAVE 444 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~~--~h~~~v~~v~~~p--~~~-~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+......|+.+-.+.-|..++..... ....+.... ...+.+-.|+.-. ++. .+|+|.-.+++..+||....
T Consensus 186 VvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~ 264 (353)
T d1h6la_ 186 AADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ 264 (353)
T ss_dssp EEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 999988889988888767666654211 122222222 2466788888653 233 34555555789999998754
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=90.54 E-value=1.2 Score=43.24 Aligned_cols=159 Identities=7% Similarity=0.002 Sum_probs=88.7
Q ss_pred EEEecC---CCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe-EEEEEECC-----------
Q psy4510 277 AMDWSS---TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR-VLASCSVD----------- 341 (812)
Q Consensus 277 ~l~~sp---~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-~l~s~~~d----------- 341 (812)
.+++.. ||+.+++.-..+..|.+-|+...+...+. .. .....+..+...++.++ +++..+.+
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi--~i-Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l 165 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAIL--EI-PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 165 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEE--EC-SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEE--ec-CCCCCCceeecccCCCeEEEEccCccccccCCCCccc
Confidence 444543 67444555556889999999887632211 11 23344565665443332 34444442
Q ss_pred -------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC---------------------------
Q psy4510 342 -------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--------------------------- 387 (812)
Q Consensus 342 -------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--------------------------- 387 (812)
+.+.++|..+... ...+. -......+.++++|+++++.+.+
T Consensus 166 ~d~~~y~~~~t~ID~~tm~V---~~QV~--V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie 240 (459)
T d1fwxa2 166 EDVANYVNVFTAVDADKWEV---AWQVL--VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 240 (459)
T ss_dssp TCGG-EEEEEEEEETTTTEE---EEEEE--ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred cchhhcceEEEEEecCCceE---EEEee--eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhH
Confidence 2356778774332 22221 12345678999999977776532
Q ss_pred -----------CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 388 -----------GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 388 -----------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+.+-|.+.......+..+.-.+ ....+..+|+|..+++++..+.++.++|++..
T Consensus 241 ~av~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpK-sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki 307 (459)
T d1fwxa2 241 KAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 307 (459)
T ss_dssp HHHHHTCSEEETTEEEEECSGG--CSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred HhhhcCCcEEeCCceeecccccCCcceeEEEecCC-CCCceEECCCCCEEEEeCCcCCcEEEEEehhh
Confidence 123444444321112222232222 23578999999766677777999999999765
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.46 E-value=8.7 Score=36.74 Aligned_cols=178 Identities=8% Similarity=-0.005 Sum_probs=95.6
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCC------CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRG------KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~------~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
..-++.++...++++|+.++ ++|-..+.- ........+...+ ..|..++|+.+ .|+.. .++.+..
T Consensus 39 ~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~i----p~v~~vafs~d---~l~v~-~~~~l~~ 109 (381)
T d1xipa_ 39 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEI----PDVIFVCFHGD---QVLVS-TRNALYS 109 (381)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEEC----TTEEEEEEETT---EEEEE-ESSEEEE
T ss_pred cceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCC----CCeEEEEeeCC---EEEEE-eCCCEEE
Confidence 44566767666777776665 445442110 0000011222222 36889999864 34444 3467888
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCeEEEEEcCCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTE 378 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~ 378 (812)
++...-.. ......-..++..+.++|. .++....+|.+.++++............ ...-.+.+.+++|++.|
T Consensus 110 ~~~~~l~~----~~~~~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kg 182 (381)
T d1xipa_ 110 LDLEELSE----FRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRS 182 (381)
T ss_dssp EESSSTTC----EEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSC
T ss_pred EEeecccc----ccccccccccccceecCCc---eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCc
Confidence 88776542 1222223456888888885 3677778899999999865432211000 00113568888888888
Q ss_pred CEEEEEeCCCcEEE-EecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 379 PLIVSGGDDGCIHV-WDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 379 ~~l~sg~~dg~i~i-wd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
..++++..++ ..+ -++.. ...+.........|.+|.|-.+.
T Consensus 183 kq~v~~~g~~-~q~k~~i~~---~~~~~~p~~~~~~v~sI~WL~~~ 224 (381)
T d1xipa_ 183 FQSFAWRNGE-MEKQFEFSL---PSELEELPVEEYSPLSVTILSPQ 224 (381)
T ss_dssp EEEEEEETTE-EEEEEEECC---CHHHHTSCTTTSEEEEEEESSSS
T ss_pred EEEEEeCCCc-eeeccCCCC---ccccCCCcCCCcceeEEEEecCc
Confidence 7777764332 221 12211 11111111234468899998763
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=87.09 E-value=18 Score=37.03 Aligned_cols=72 Identities=6% Similarity=-0.056 Sum_probs=45.5
Q ss_pred ceEEEEecCCCcee-EEE--------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccc-cCCCcceeEeEEecCCc
Q psy4510 679 RNIHIWTPREAGAW-SVY--------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEK 748 (812)
Q Consensus 679 g~v~iWd~~~~~~~-~~~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~-~gH~~~V~~l~fs~dg~ 748 (812)
|.|.-||+.+|++. ... .++..|.+|+.|+.||.++.+|..+|+.+=. ...- ..+..+ +.|..||+
T Consensus 453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~-~~~~~~~~a~P---~tY~~dGk 528 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK-FKIPSGAIGYP---MTYTHKGT 528 (596)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE-EECSSCCCSCC---EEEEETTE
T ss_pred ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeE-EECCCCcccCC---eEEEECCE
Confidence 56777777776642 221 2344577888999999999999999985100 1111 112222 56777999
Q ss_pred eeEEee
Q psy4510 749 RVLASC 754 (812)
Q Consensus 749 ~~L~s~ 754 (812)
+|++..
T Consensus 529 QYvav~ 534 (596)
T d1w6sa_ 529 QYVAIY 534 (596)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887743
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=84.98 E-value=3.5 Score=42.69 Aligned_cols=73 Identities=12% Similarity=0.117 Sum_probs=46.1
Q ss_pred ceEEEEecCCCcee-EEE--------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce
Q psy4510 679 RNIHIWTPREAGAW-SVY--------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 749 (812)
Q Consensus 679 g~v~iWd~~~~~~~-~~~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~ 749 (812)
|.|.-||+.+|++. +.. ..+-.|.+|++|+.||.++.+|..+|+.+=. ...-.+..+.. +.|..+|++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~-~~~~~~~~~~P--~ty~~~GkQ 533 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE-APTGTGVVAAP--STYMVDGRQ 533 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE-EECSSCCCSCC--EEEEETTEE
T ss_pred ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEE-EECCCCccccC--EEEEECCEE
Confidence 46778888887654 222 2334678888999999999999999985110 01111111111 566779987
Q ss_pred eEEee
Q psy4510 750 VLASC 754 (812)
Q Consensus 750 ~L~s~ 754 (812)
|++..
T Consensus 534 Yv~v~ 538 (573)
T d1kb0a2 534 YVSVA 538 (573)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=82.09 E-value=13 Score=36.69 Aligned_cols=55 Identities=13% Similarity=0.192 Sum_probs=37.2
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE------cCCCCcEEEEEecCC
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF------SGHLTEGFAMDWSST 283 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~------~~h~~~v~~l~~sp~ 283 (812)
..-++|+|.|+++.|++--..|.|++++..++. .+.+..+ ..-.+....|+++|+
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~-----~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS-----VKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC-----EEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCc-----EeecccCCccccccCCCCceeeEEeCCC
Confidence 456699999999988776557999998877652 1222222 112356789999995
|