Diaphorina citri psyllid: psy4520

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-

MSEYSLDLALQGVTTLWGSFEVQNKRLARIMLQQLVRKPLLDNLDKFDEYSDWFKTLPMYFLTFHGPQPLKLVMELVRKPLLDNLDKFDEYSDWFKTLPMYFLTFHGPQPLKLVMEAVEHAMYVYDTGHVIIDNVQFMLGLSDSALDRFYMQDTIIQEFRAFASRSHCHVTLVIHPRKENEQLTVNSVFGSAKATQESDNVLIIQQKFNQNLELKKFLQALPIERCPQFRDQPPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLVDESNPALQGFISWELSGLPDS

ccHHHHHHHHccccEEEEEEEEcHHHHHHHHHHHHHcccccccccccccccHHHccccccccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHHHccccEEEEccHHHHHcccccccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHccccccccccccccccCEECccEEEEEECcccccHHHHHHHccccccccccccccccccEEEEEEcccccc

*SEYSLDLALQGVTTLWGSFEVQNKRLARIMLQQLVRKPLLDNLDKFDEYSDWFKTLPMYFLTFHGPQPLKLVMELVRKPLLDNLDKFDEYSDWFKTLPMYFLTFHGPQPLKLVMEAVEHAMYVYDTGHVIIDNVQFMLGLSDSALDRFYMQDTIIQEFRAFASRSHCHVTLVIHPRKENEQLTVNSVFGSAKATQESDNVLIIQQKFNQNLELKKFLQALPIERCPQFRDQPPGSTATYNGKCYIFYNRRPMNLRDSLAFCRSRGGSLV*****ALQGFISWELSGLP**

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0034214 [BP]	protein hexamerization	probable	GO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0006268 [BP]	DNA unwinding involved in replication	probable	GO:0071103, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0006260, GO:0006261, GO:0032392, GO:0006139, GO:0032508, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0046483, GO:0044238, GO:0044237, GO:0043170, GO:0006259
GO:0043139 [MF]	5'-3' DNA helicase activity	probable	GO:0016787, GO:0016818, GO:0003824, GO:0017111, GO:0016817, GO:0016462, GO:0003674, GO:0003678, GO:0004386
GO:0042645 [CC]	mitochondrial nucleoid	probable	GO:0031974, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0009295, GO:0005759, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0002020 [MF]	protease binding	probable	GO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0003697 [MF]	single-stranded DNA binding	probable	GO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0051260 [BP]	protein homooligomerization	probable	GO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0006390 [BP]	transcription from mitochondrial promoter	probable	GO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:1901360, GO:0034645, GO:1901362, GO:0044699, GO:0006139, GO:0044260, GO:0071840, GO:0016043, GO:0008150, GO:0071704, GO:0010467, GO:0007005, GO:0018130, GO:0006996, GO:1901576, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0044763, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438, GO:0000959

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1Q57, chain A
Confidence level:very confident
Coverage over the Query: 2-50,86-252
View the alignment between query and template
View the model in PyMOL

Template: 3BDW, chain A
Confidence level:probable
Coverage over the Query: 232-282
View the alignment between query and template
View the model in PyMOL