Psyllid ID: psy4574

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
SENKQIIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHcccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEccccHHHHHccccccccccccccccccEcccccHHHccccccccccccccccccccEcccccHHHHHHHcccccccccccccccEcccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccEEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHHccccccccEEccccccccccccccccccccHHHHHHHHHcccccccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
senkqiigdlkventVYRIKSKDLLASfssdvwdeercrscgllsgsiTQTYIHYLecknrgklyecslcnesFENKKVLFRHLRgkhgmkiklsrhktkcvchycnrtfdSKAKIQEHIISSHmheklyqcdfcgsqqrtkcrfyyhlrdkhlskpanlscefcsRIFTKKELLRSHLAVHkigknyqcyycrktychkpnltnhiqnvhlKSELEKRTAILKREFICDvcgksyvrkgaltehhqrehqgkkpvcticgkmLIDKrslanhmnthtglkphcceicgrsYSTAAYLKVHMschtgetshtchlcpqkfrqrssytlhykthhpgvippklr
Flexible Loop (DISEMBL)
senkqiigdlkventvyrikskdllasfssdvwdeERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGkhgmkiklsrhktkcVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKhlskpanlSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALtehhqrehqgkkpvctiCGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYtlhykthhpgvippklr
Low Complexity Region (SEG)
SENKQIIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Disordered region (IsUnstruct)
*****IIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHH*****GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH**********
Disordered Region (DISOPRED)
*****II**LKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Disordered Region (DISEMBL)
SENKQIIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALT***********PVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Disordered Region (DISPRO)
*****IIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SENKQIIGDLKVENTVYRIKSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPKLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q6ZMW2	699	Zinc finger protein 782 O	yes	N/A	0.728	0.357	0.341	1e-30
P51523	738	Zinc finger protein 84 OS	no	N/A	0.749	0.348	0.333	1e-30
Q06732	778	Zinc finger protein 33B O	no	N/A	0.723	0.318	0.349	3e-30
Q9Y6Q3	630	Zinc finger protein 37 ho	no	N/A	0.723	0.393	0.330	4e-30
Q5R4K8	730	Zinc finger protein 615 O	no	N/A	0.903	0.424	0.305	1e-29
P10076	861	Zinc finger protein 26 OS	no	N/A	0.723	0.288	0.330	1e-29
P17030	456	Zinc finger protein 25 OS	no	N/A	0.816	0.614	0.334	1e-29
A2VDP4	647	Zinc finger protein 567 O	no	N/A	0.752	0.398	0.348	2e-29
Q96RE9	604	Zinc finger protein 300 O	no	N/A	0.723	0.410	0.341	3e-29
Q96EQ9	843	Histone-lysine N-methyltr	no	N/A	0.787	0.320	0.331	5e-29

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  134 bits (337), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 131/275 (47%), Gaps = 25/275 (9%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K +EC  C +SF  K +L  H R   G K           C+ C ++F   + ++ H   
Sbjct: 448 KPFECHECGKSFNYKSILIVHQRTHTGEK--------PFECNECGKSFSHMSGLRNHR-R 498

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           +H  E+ Y+CD CG   + K     H R     KP    C  C + F +K  LR H  +H
Sbjct: 499 THTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKP--YKCNQCGKAFGQKSQLRGHHRIH 556

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K Y+C +C + +  K NL  H            RT   ++ + C+ CGK++ +K  L
Sbjct: 557 TGEKPYKCNHCGEAFSQKSNLRVH-----------HRTHTGEKPYQCEECGKTFRQKSNL 605

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
              HQR H G+KP  C  CGK   +K  L  H  THTG KP+ C  CG ++S  + L+VH
Sbjct: 606 -RGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVH 664

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG 336
              HTGE  + C  C + F Q+SS   H K  HPG
Sbjct: 665 QRTHTGEKPYKCDKCGRTFSQKSSLREHQKA-HPG 698

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|P51523|ZNF84_HUMAN Zinc finger protein 84 OS=Homo sapiens GN=ZNF84 PE=1 SV=2

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 132/291 (45%), Gaps = 34/291 (11%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K YEC  C ++F  K  L  H R   G K           C+ C R F  K+ +  H   
Sbjct: 289 KPYECGECGKAFSRKSHLISHWRTHTGEK--------PYGCNECGRAFSEKSNLINHQ-R 339

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
            H  EK ++C  CG     K +   H R    +KP    C  C + F +K  L  H  +H
Sbjct: 340 IHTGEKPFECRECGKAFSRKSQLVTHHRTHTGTKP--FGCSDCRKAFFEKSELIRHQTIH 397

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNH-------------------IQNVHLKSELEKRTAIL 223
              K Y+C  CRK +  + +L NH                    Q  HL S   + T   
Sbjct: 398 TGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISH--QMTHTG 455

Query: 224 KREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKP 282
           ++ FIC  CGK++ RK  L  H QR H G+KP  C+ CGK   +K SL NH   HTG KP
Sbjct: 456 EKPFICSKCGKAFSRKSQLVRH-QRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGEKP 514

Query: 283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           + C  CG+++   ++L  H   HTGE  + C  C + F ++SS   H +TH
Sbjct: 515 YVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTH 565

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q06732|ZN33B_HUMAN Zinc finger protein 33B OS=Homo sapiens GN=ZNF33B PE=2 SV=2

 Score =  132 bits (333), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K +EC+ C ++F  K  L RH R   G K           C+ C +TF  K+ + +H   
Sbjct: 327 KHFECNECGKAFWEKSHLTRHQRVHTGEK--------HFQCNQCGKTFWEKSNLTKHQ-R 377

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           SH  EK ++C+ CG     K     H R     KP    C  C + F +K  L  H   H
Sbjct: 378 SHTGEKPFECNECGKAFSHKSALTLHQRTHTGEKP--YQCNACGKTFYQKSDLTKHQRTH 435

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K Y+CY C K++C   +LT H           +RT   ++ F C  CGKS+ +K  L
Sbjct: 436 TGQKPYECYECGKSFCMNSHLTVH-----------QRTHTGEKPFECLECGKSFCQKSHL 484

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
           T+H QR H G KP  C  CGK    K  L  H   HTGLKP+ C  CG+++   + L +H
Sbjct: 485 TQH-QRTHIGDKPYECNACGKTFYHKSVLTRHQIIHTGLKPYECYECGKTFCLKSDLTIH 543

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTGE    C  C + F  +S+ + HY+TH
Sbjct: 544 QRTHTGEKPFACPECGKFFSHKSTLSQHYRTH 575

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9Y6Q3|ZFP37_HUMAN Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3

 Score =  132 bits (332), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K YEC+ C ++F +   L +H+R   G K           C  C ++F   + + EH+  
Sbjct: 375 KPYECAECGKTFRHSSNLIQHVRSHTGEKP--------YECKECGKSFRYNSSLTEHV-R 425

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           +H  E  Y+C+ CG   +       H+R     KP    C  C + F+KK  L  H   H
Sbjct: 426 THTGEIPYECNECGKAFKYSSSLTKHMRIHTGEKP--FECNECGKAFSKKSHLIIHQRTH 483

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K Y+C  C K + H  +LT H+           RT   +  F C+ CGK + +   L
Sbjct: 484 TKEKPYKCNECGKAFGHSSSLTYHM-----------RTHTGESPFECNQCGKGFKQIEGL 532

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
           T+H QR H G+KP  C  CGK    K  L  H  THTG KP+ C  C ++++  + L +H
Sbjct: 533 TQH-QRVHTGEKPYECNECGKAFSQKSHLIVHQRTHTGEKPYECNECEKAFNAKSQLVIH 591

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTGE  + C+ C + F+Q +S T H KTH
Sbjct: 592 QRSHTGEKPYECNECGKTFKQNASLTKHVKTH 623

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R4K8|ZN615_PONAB Zinc finger protein 615 OS=Pongo abelii GN=ZNF615 PE=2 SV=2

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 150/334 (44%), Gaps = 24/334 (7%)

Query: 1   SENKQIIGDLKVENTVYRI-KSKDLLASFSSDVWDEERCRSCGLLSGSITQTYIHYLECK 59
           + +KQ   ++K   T   I KS+ +    + ++ +   C  CG     ++Q +I +    
Sbjct: 167 ANHKQFYTEMKFPATAKPINKSQFIKQQRTHNIENAHVCSECGKAFLKLSQ-FIDHQRVH 225

Query: 60  NRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEH 119
           N  K + CS+C ++F  K  L  H R       +L  ++    C  C++TF  K+++  H
Sbjct: 226 NGEKPHVCSMCGKAFSRKSRLMDHQR----THTELKHYE----CTECDKTFLKKSQLNIH 277

Query: 120 IISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHL 179
              +HM EK Y C  CG     KCR  YH R     KP    C  C + F+ K  L +H 
Sbjct: 278 Q-KTHMGEKPYTCSECGKAFIKKCRLIYHQRTHTGEKPH--GCSVCGKAFSTKFSLTTHQ 334

Query: 180 AVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRK 239
             H   K Y C  C K +  K  L  H            RT   ++ FIC+ CGK +  K
Sbjct: 335 KTHTGEKPYICSECGKGFIEKRRLIAH-----------HRTHTGEKPFICNKCGKGFTLK 383

Query: 240 GALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLK 299
            +L  H Q   + K   C+ CGK    K  L  H  THTG KP+ C  CG+ ++  + L 
Sbjct: 384 NSLITHQQTHTEEKLYTCSECGKGFSMKHCLMVHQRTHTGEKPYKCNECGKGFALKSPLI 443

Query: 300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            H   HTGE  + C  C + F  +S   +H +TH
Sbjct: 444 RHQRTHTGEKPYVCTECRKGFTMKSDLIVHQRTH 477

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 124/272 (45%), Gaps = 24/272 (8%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K YEC  C ++F  +  L +H+R   G +           C  C + F S A++  HI  
Sbjct: 580 KPYECKECGKTFPERSCLTKHIRTHTGER--------PYECKECGKGFISFAQLTVHI-K 630

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           +H  E+ +QC  C    R       H R     KP    C +C + FT +  L  HL  H
Sbjct: 631 THSSERPFQCKVCTKSFRNSSSLETHFRIHTGVKP--YKCSYCGKAFTARSGLTIHLRNH 688

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K+Y C  C K +     L  HI           R+   ++ F CD CGK++     L
Sbjct: 689 TGEKSYACQECGKAFSTSSGLIAHI-----------RSHKGEKPFECDHCGKAFASSSYL 737

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
             H  + H G+KP  CT+CGK       L  HM THTG KP  C ICG+S+  ++YL+VH
Sbjct: 738 NVH-LKIHTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVH 796

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           M  HTGE  + C  C + F + S    H + H
Sbjct: 797 MRIHTGEKPYVCQYCGKAFTEHSGLNKHLRKH 828

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|P17030|ZNF25_HUMAN Zinc finger protein 25 OS=Homo sapiens GN=ZNF25 PE=2 SV=2

 Score =  130 bits (328), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 144/317 (45%), Gaps = 37/317 (11%)

Query: 38  CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHG-------- 89
           C  CG  S S  +  I + +   R K YEC  C + F +   L RHLR   G        
Sbjct: 148 CDKCGK-SFSKNEDLIRHQKIHTRDKTYECKECKKIFYHLSSLSRHLRTHAGEKPYECNQ 206

Query: 90  ------MKIKLSRHKT------KCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGS 137
                  K  L+ H+          C  C + F  KA +  H   +H  EK Y+C  CG 
Sbjct: 207 CEKSFYQKPHLTEHQKTHTGEKPFECTECGKFFYVKAYLMVHQ-KTHTGEKPYECKECGK 265

Query: 138 QQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTY 197
               K     H R     KP    C+ C + F++   L++H   H   K Y+C  CRK +
Sbjct: 266 AFSQKSHLTVHQRMHTGEKP--YKCKECGKFFSRNSHLKTHQRSHTGEKPYECKECRKCF 323

Query: 198 CHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV- 256
             K  LT H           +RT   ++ F C+ CGK++  K  LT+H QR+H G+KP  
Sbjct: 324 YQKSALTVH-----------QRTHTGEKPFECNKCGKTFYYKSDLTKH-QRKHTGEKPYE 371

Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           CT CGK       L  H  THTG KP+ C+ CG+S+S  ++  +H   HTGE  + C  C
Sbjct: 372 CTECGKSFAVNSVLRLHQRTHTGEKPYACKECGKSFSQKSHFIIHQRKHTGEKPYECQEC 431

Query: 317 PQKFRQRSSYTLHYKTH 333
            + F Q+S  T H KTH
Sbjct: 432 GETFIQKSQLTAHQKTH 448

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2VDP4|ZN567_BOVIN Zinc finger protein 567 OS=Bos taurus GN=ZNF567 PE=2 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 135/290 (46%), Gaps = 32/290 (11%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K Y+C  C  SF  K  L  H R   G K          VC+ C ++F  K  + +H   
Sbjct: 279 KPYQCHQCGNSFRRKSYLIDHQRTHTGEK--------PFVCNECGKSFRLKTALTDHQ-R 329

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           +H  EK Y+C  C +  R K     H R     KP    C  C + F +K  L  H  +H
Sbjct: 330 THTGEKSYECPQCRNAFRLKSHLIRHQRTHTGEKP--YECSDCGKSFRQKTTLSLHQRIH 387

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHL-----------KSELEKRTAIL-------K 224
              K Y C  C K++  K NLT H Q  H            KS  +K T  L       +
Sbjct: 388 TGEKPYICKECGKSFHQKANLTVH-QRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEE 446

Query: 225 REFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPH 283
           + +IC+ CGKS+ +K  L   HQR H G+K   C  CGK    K  L +H  THTG KP+
Sbjct: 447 KPYICNECGKSFPQKTTLVA-HQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPY 505

Query: 284 CCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            C  CG+S+S    L +H   HTGE  + C+ C + FRQ+++ T+H K H
Sbjct: 506 ECNECGKSFSQKTNLNLHQRIHTGEKPYICNECGKSFRQKATLTVHQKIH 555

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

>sp|Q96RE9|ZN300_HUMAN Zinc finger protein 300 OS=Homo sapiens GN=ZNF300 PE=2 SV=1

 Score =  129 bits (324), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 127/272 (46%), Gaps = 24/272 (8%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K YECS C ++F  K  L  H R   G K           C  C + F  K+++  H   
Sbjct: 351 KPYECSECGKAFSQKSPLIIHQRIHTGEK--------PYECRECGKAFSQKSQLIIHH-R 401

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
           +H  EK Y+C  CG     K     H R     KP    C  C   F++K  L +H  VH
Sbjct: 402 AHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKP--YKCAQCEEAFSRKTELITHQLVH 459

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K Y+C  C KT+  K  L  H           +RT   ++ + C  CGK++ +K  L
Sbjct: 460 TGEKPYECTECGKTFSRKSQLIIH-----------QRTHTGEKPYKCSECGKAFCQKSHL 508

Query: 243 TEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
              HQR H G+KP +CT CGK    K  L  H   HTG KP+ C  CG+++S  + L +H
Sbjct: 509 I-GHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLH 567

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTGE  + C +C + F Q+S  T+H + H
Sbjct: 568 QRIHTGERPYQCAICGKAFIQKSQLTVHQRIH 599

Has a transcriptional repressor activity.

Homo sapiens (taxid: 9606)

>sp|Q96EQ9|PRDM9_MOUSE Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus GN=Prdm9 PE=1 SV=2

 Score =  128 bits (322), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 125/299 (41%), Gaps = 29/299 (9%)

Query: 38  CRSCGLLSGSITQ--TYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLS 95
           CR CG      TQ    I +       K Y C  C   F  K  L +H R   G K    
Sbjct: 567 CRECGR---GFTQKSDLIKHQRTHTGEKPYVCRECGRGFTQKSDLIKHQRTHTGEK---- 619

Query: 96  RHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLS 155
                 VC  C R F  K+ + +H   +H  EK Y C  CG     K     H R     
Sbjct: 620 ----PYVCRECGRGFTQKSVLIKHQ-RTHTGEKPYVCRECGRGFTQKSVLIKHQRTHTGE 674

Query: 156 KPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSE 215
           KP    C  C R FT K +L  H   H   K Y C  C + +  K NL  H         
Sbjct: 675 KP--YVCRECGRGFTAKSVLIQHQRTHTGEKPYVCRECGRGFTAKSNLIQH--------- 723

Query: 216 LEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHM 274
             +RT   ++ ++C  CG+ +  K  L +H QR H G+KP VC  CG+    K  L  H 
Sbjct: 724 --QRTHTGEKPYVCRECGRGFTAKSVLIQH-QRTHTGEKPYVCRECGRGFTAKSVLIQHQ 780

Query: 275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            THTG KP+ C  CGR ++  + L  H   HTGE  + C  C   F Q+S    H +TH
Sbjct: 781 RTHTGEKPYVCRECGRGFTQKSNLIKHQRTHTGEKPYVCRECGWGFTQKSDLIQHQRTH 839

Histone methyltransferase that specifically trimethylates 'Lys-4' of histone H3 during meiotic prophase and is essential for proper meiotic progression. Does not have the ability to mono- and dimethylate 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Plays a central role in the transcriptional activation of genes during early meiotic prophase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
193591726	536	PREDICTED: zinc finger protein 271-like	0.752	0.481	0.351	4e-32
334324890	1109	PREDICTED: zinc finger protein 135-like	0.723	0.223	0.347	9e-32
432958426	264	PREDICTED: zinc finger protein 182-like,	0.717	0.931	0.340	1e-31
334327353	1783	PREDICTED: hypothetical protein LOC10001	0.793	0.152	0.309	3e-31
326673953	765	PREDICTED: zinc finger protein 850-like	0.813	0.364	0.331	4e-31
326667465	2943	PREDICTED: hypothetical protein LOC57172	0.793	0.092	0.333	5e-31
326673951	810	PREDICTED: zinc finger protein 850-like	0.819	0.346	0.322	5e-31
405950372	592	Histone-lysine N-methyltransferase PRDM9	0.903	0.523	0.277	7e-31
444725063	590	Zinc finger protein 717 [Tupaia chinensi	0.731	0.425	0.345	9e-31
334325094	683	PREDICTED: zinc finger protein 135-like	0.723	0.363	0.319	1e-30

>gi|193591726|ref|XP_001944018.1| PREDICTED: zinc finger protein 271-like [Acyrthosiphon pisum]

 Score =  144 bits (364), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 133/282 (47%), Gaps = 24/282 (8%)

Query: 53  IHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDS 112
           I +L+   R K Y C +C++SF     L  H R     K  L        C  C+R+F +
Sbjct: 9   IKHLQTHARQKPYTCDVCDKSFSQSGSLLVHQRTHAEEKPYL--------CDICDRSFSN 60

Query: 113 KAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKK 172
           K ++  H   +H  EK YQCD C            H R     KP    C+ C + F+  
Sbjct: 61  KGELMAHY-RTHPGEKPYQCDVCDKSFSVSSSLTKHRRTHTGEKP--YQCDVCDKSFSNN 117

Query: 173 ELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVC 232
             L+ H   H   K YQC  C K++  K +LT H           +RT   ++ + CDVC
Sbjct: 118 GDLKRHQRTHTGEKPYQCDVCDKSFSVKSSLTIH-----------RRTHTGEKPYQCDVC 166

Query: 233 GKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRS 291
            KS+   GAL  H +R H G+KP  C +C K      SL  H  THTG KP+ C++C +S
Sbjct: 167 DKSFSNNGALIIH-RRTHTGEKPYQCDVCDKSFSVSSSLTIHRRTHTGEKPYQCDVCDKS 225

Query: 292 YSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           +S    LK H   HTGE SH C +C + F   SS T H +TH
Sbjct: 226 FSNNGDLKRHQRTHTGEKSHQCDVCDKSFSVSSSLTKHRRTH 267

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|334324890|ref|XP_001374319.2| PREDICTED: zinc finger protein 135-like [Monodelphis domestica]

 Score =  143 bits (361), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 133/273 (48%), Gaps = 25/273 (9%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K YEC  C ++F +++ +  H R   G K           C  C + F S+  I EH  S
Sbjct: 451 KPYECGQCGKAFRSRRSIIEHQRVHTGEK--------PYECGQCGKAFRSRRSIIEHQ-S 501

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
            H  EK Y+CD CG     K   + H R     KP    C  C + FT K +L  H  +H
Sbjct: 502 IHTGEKPYECDQCGKAFTQKSGLFIHQRIHTGEKP--YGCNQCGKAFTHKSVLTKHQRIH 559

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K ++C  C K +  +  LT H Q +H            ++ F C++CGK++++KG L
Sbjct: 560 TGEKPFECNLCGKAFIQRGELTVH-QRIHTG----------EKPFECNLCGKAFIQKGKL 608

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
           T  HQR H G+KP  C  CGK  I + SL  H   HTG KP  C  CG+++   A L  H
Sbjct: 609 TV-HQRIHTGEKPYECNQCGKAFIQRASLTVHQKIHTGEKPFKCNQCGKAFIQKATLTAH 667

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSY-TLHYKTH 333
              HTGE    C+ C + F Q+++Y T+H + H
Sbjct: 668 QRIHTGEKPFKCNQCGKAFIQKATYLTVHQRIH 700

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432958426|ref|XP_004086026.1| PREDICTED: zinc finger protein 182-like, partial [Oryzias latipes]

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 133/270 (49%), Gaps = 24/270 (8%)

Query: 65  YECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSH 124
           + C +C +SF     L  H+R     K+          C  C +TF     +  H+  +H
Sbjct: 5   FTCEVCGKSFTTGSDLKVHIRIHTAKKLF--------PCDICEKTFIHVNSLTSHM-RTH 55

Query: 125 MHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKI 184
             +KL+ CD C     +     YH+R     +P   SC+ C + FT+   L  H+  H  
Sbjct: 56  TAKKLFSCDICKKVFVSSRNLTYHMRTHTDERP--YSCKVCKKCFTQHSCLNVHMRTHTG 113

Query: 185 GKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTE 244
            + Y C  CRKT+ H  NLT H+           RT   +R F C++C K ++   AL  
Sbjct: 114 ERPYSCDICRKTFIHSNNLTLHM-----------RTHTGERPFTCELCQKGFMHSRALNV 162

Query: 245 HHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS 303
           H  R H G+KP  C +C K    K SL  HM  HTG +P  CE+CG+S++T + LK+HM 
Sbjct: 163 H-MRNHTGEKPYSCKVCEKHFTQKSSLNVHMRIHTGERPFTCEVCGKSFTTGSDLKIHMR 221

Query: 304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            HTGE  +TC +C + F Q+SS  +H + H
Sbjct: 222 NHTGERPYTCKVCKKHFTQKSSLNVHMRIH 251

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327353|ref|XP_001371662.2| PREDICTED: hypothetical protein LOC100018428 [Monodelphis domestica]

 Score =  142 bits (357), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 92/297 (30%), Positives = 136/297 (45%), Gaps = 25/297 (8%)

Query: 38   CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRH 97
            CR CG    S +Q  +H+       K Y+C  C ++F  +  L  HLR   G K     H
Sbjct: 1478 CRQCGKTFTSNSQLAVHH-RIHTGEKPYDCKQCGKAFIRRDQLAVHLRIHTGEK----PH 1532

Query: 98   KTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP 157
            +    C  C +TF+ K+ + EH   +H  EK Y+C  CG           H R     KP
Sbjct: 1533 E----CKQCEKTFNRKSSLAEHQ-KTHTGEKPYECKQCGKTFSHSSSLAAHQRIHTGEKP 1587

Query: 158  ANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELE 217
             +  C+ C + F+++    +H  +H   K Y C  C KT+     L+ H Q +H      
Sbjct: 1588 YD--CKQCGKTFSQRSHFAAHQRIHTGEKPYDCKQCGKTFSQSSTLSVH-QRIHTG---- 1640

Query: 218  KRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNT 276
                  ++ + C  CGK++     L  H QR H G+KP  C  C     +  SLA H   
Sbjct: 1641 ------EKPYKCKQCGKTFTNNSNLAVH-QRTHTGEKPYECKYCEMTFSESSSLAVHQRI 1693

Query: 277  HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            HTG KP+ C+ CG+++S ++ L  H   HTGE  + C  C + F Q S+  +H + H
Sbjct: 1694 HTGEKPYDCKQCGKTFSQSSSLAAHQRIHTGEKPYECKQCGKAFSQGSALAVHQRIH 1750

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326673953|ref|XP_001921672.3| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 144/305 (47%), Gaps = 26/305 (8%)

Query: 32  VWDEERCRSCGLLSGSITQTYIH--YLECKNRGKLYECSLCNESFENKKVLFRHLRGKHG 89
           V   E+  +C L   S T    H  ++      K Y C  C +SF  K+ L +H++   G
Sbjct: 386 VHSGEKPYTCQLCGKSFTWKRYHTEHMRIHTGEKPYTCQQCGKSFICKQNLVKHMKVHSG 445

Query: 90  MKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHL 149
            K           C  C ++F  K  +Q H+ + H    LY C  CG     + R   H 
Sbjct: 446 EKPH--------TCDQCGKSFTCKQNLQNHM-TFHTGGNLYTCQHCGKSFTREQRLTEHT 496

Query: 150 RDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQN 209
           R     KP   +C+ C + FT ++ L++H+ +H   K Y C  C K++  K NLT H+  
Sbjct: 497 RIHTGEKP--YTCQQCGKSFTGEQNLKNHMKIHTGEKMYTCKQCGKSFTWKQNLTEHM-- 552

Query: 210 VHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKR 268
                    +    ++ + C  CGKS+  K  L EH  R H G+KP  C  CGK    K+
Sbjct: 553 ---------KIHTGEKPYTCQECGKSFFWKQTLIEH-TRIHTGEKPNTCCQCGKSFTWKQ 602

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL 328
           +L +HM  HTG KPH C+ CG+S+     LK HM  HTGE  HTCH C + F  + + T 
Sbjct: 603 NLIDHMRIHTGEKPHSCQQCGKSFVCTQSLKRHMRVHTGEKPHTCHQCGKSFSWKKNLTE 662

Query: 329 HYKTH 333
           H + H
Sbjct: 663 HMRIH 667

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667465|ref|XP_700431.5| PREDICTED: hypothetical protein LOC571721 [Danio rerio]

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 140/297 (47%), Gaps = 25/297 (8%)

Query: 38   CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRH 97
            C+ CG  S S  QT   ++      K + C  C ++F +K+ L  H+R   G K      
Sbjct: 1136 CQQCGK-SFSQKQTLKVHMRIHTGEKPFSCHHCGKTFTDKQNLMVHMRIHTGDKPY---- 1190

Query: 98   KTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP 157
                +C  C + F  K  +  H+   H  EK YQC  CG     K     H+   +  KP
Sbjct: 1191 ----ICTVCGKNFSQKPSLDVHV-GIHTGEKPYQCQQCGKSFNRKQNLQVHMSIHNGDKP 1245

Query: 158  ANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELE 217
                C+ C + F +K+ L+ H+ +H   K + C+ C KT+C K NL  H           
Sbjct: 1246 --YQCQQCGKSFNRKQNLQVHMRIHTGEKPFSCHQCGKTFCQKRNLAIH----------- 1292

Query: 218  KRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNT 276
            +R    +R + C  CG+S+ +K  L  H  R H G KP  C  CGK  IDK+ L  HM  
Sbjct: 1293 RRIHTGERPYTCQQCGRSFTQKQNLKVH-MRIHTGDKPYQCQECGKSFIDKQHLKVHMRI 1351

Query: 277  HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            HTG KP+ C+ C RS+     LKVHM  HTGE   TCH C +   ++ +  +H + H
Sbjct: 1352 HTGDKPYQCQQCERSFDRKENLKVHMRIHTGEKPFTCHQCGKSLNRKKNLQVHMRIH 1408

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326673951|ref|XP_003200036.1| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 147/316 (46%), Gaps = 35/316 (11%)

Query: 38  CRSCGLLSGSITQ--TYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLS 95
           C+ CG    S TQ    I ++   N+ K + C+ C + F  K  L  H+R   G K    
Sbjct: 169 CQQCGQ---SFTQRGNLIAHMRGHNKVKPFSCAECGQGFTQKGNLKAHMRAHSGEK---- 221

Query: 96  RHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLS 155
                  C  C ++F  K  +  H+   H  EK Y C  CG     K     H+R     
Sbjct: 222 ----PFDCSLCGQSFARKEILNAHL-RVHTGEKPYICTKCGQSFTQKGNLNSHMRRHSGE 276

Query: 156 KPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHI-----QNV 210
           KP   +C  C + FT+KE+L SH+ +H   K Y C  C +++  K N   H+     +  
Sbjct: 277 KPH--TCSQCGQSFTRKEVLTSHMRIHTGEKPYTCTECGRSFAQKGNYNTHMRGHRGEKP 334

Query: 211 HLKSELEK---RTAIL---------KREFICDVCGKSYVRKGALTEHHQREHQGKKP-VC 257
           H  ++  +   R  +L         ++ F C  CG+S+ ++G L E H R H  +KP VC
Sbjct: 335 HTCTQCGRGFTRNEVLIAHMRVHTGEKPFTCQQCGQSFTQRGNL-EGHMRSHGAEKPFVC 393

Query: 258 TICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCP 317
           T CG+    K +L  HM  H G KP  C  CG++++    L  HM  HTGE  +TC  C 
Sbjct: 394 TQCGQSFTQKGNLNAHMRAHNGDKPFTCSECGQNFTRKEILASHMRIHTGEKPYTCAHCG 453

Query: 318 QKFRQRSSYTLHYKTH 333
           Q+FRQR + T H + H
Sbjct: 454 QRFRQRGNLTAHLRIH 469

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405950372|gb|EKC18365.1| Histone-lysine N-methyltransferase PRDM9 [Crassostrea gigas]

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 157/342 (45%), Gaps = 32/342 (9%)

Query: 1   SENKQIIGDLKVENTVYRIKSKDLLASFSSDVW-DEERCRSCGLLSGSITQTYIHYLECK 59
           SE++Q +   +    +Y    KD+L      VW   +  +  G+  G +        +  
Sbjct: 216 SESEQNLVAFQHRGQIYYRSFKDILPGTELLVWYGHDYGKELGIFRGEVEII----PKVL 271

Query: 60  NRGKLYECSLCNESFENKKVLFRHLRGKHG-------MKIKLSRHKTKCVCHYCNRTFDS 112
           N  +++ C  C   F + + L +H + KHG         +K+SR K        +++ + 
Sbjct: 272 NGEEVFCCPFCRMGFSSYEWLSKHCKFKHGEILSKHVPDVKISRQK---AVESEDKSSEM 328

Query: 113 KAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKK 172
             K  E  ++  + EK Y+CD CG           H+R     KP    C  C + F + 
Sbjct: 329 TEKAME--MNQKIGEKPYKCDLCGKSFNLSQHLQKHMRTHTGEKP--YKCNVCGKAFNQS 384

Query: 173 ELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVC 232
           + L++H+ +H   K Y+C  C K +    NL  H+           RT   ++ + CDVC
Sbjct: 385 QNLQTHMRIHTGEKPYKCNVCGKAFNQSQNLQAHM-----------RTHTGEKPYKCDVC 433

Query: 233 GKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRS 291
           GK++   G+L + H R H G+KP  C +CGK       L  HM  HTG KP+ C++CG++
Sbjct: 434 GKAFTESGSL-QKHMRTHTGEKPYKCDVCGKAFNQSADLQKHMRIHTGEKPYKCDMCGKA 492

Query: 292 YSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           ++   +L+ HM  HTGE  + C +C + F Q +    H + H
Sbjct: 493 FNQIPHLQTHMRTHTGEKPYKCDVCGKAFNQSADLQKHMRIH 534

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|444725063|gb|ELW65643.1| Zinc finger protein 717 [Tupaia chinensis]

 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 133/275 (48%), Gaps = 24/275 (8%)

Query: 60  NRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEH 119
            + K YEC  C ++F  K  L  HLR   G K           C  C +TF  K+ + +H
Sbjct: 137 TKEKPYECEWCGKTFSWKSALTVHLRTHTGEKPY--------ECQQCRKTFSRKSALTKH 188

Query: 120 IISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHL 179
              +H  EK Y+C+ C  +   K     H       KP    CE C + F++K  L  H 
Sbjct: 189 W-RTHTGEKPYECEQCKKKFYQKSHLTIHQLTHKGEKP--YECEQCRKTFSQKAYLTVHQ 245

Query: 180 AVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRK 239
             H+  K Y+C  CRKT+C K  LT H           +RT   ++ + C  C K++ RK
Sbjct: 246 RTHQAEKPYECPLCRKTFCWKSALTVH-----------RRTHTGEKPYECQQCRKTFHRK 294

Query: 240 GALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYL 298
            ALT H  R H G+KP  C  C K    K  L  H  TH G KP+ CE CG+++S  +  
Sbjct: 295 SALTGH-WRTHTGEKPYECEQCKKKFYRKAQLTVHQITHKGEKPYECEWCGKTFSWKSAF 353

Query: 299 KVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            VH+  HTGE  + C  C + F Q+++ T+H++TH
Sbjct: 354 TVHLRIHTGEKPYECQQCRKTFHQKAALTVHWRTH 388

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334325094|ref|XP_001376336.2| PREDICTED: zinc finger protein 135-like [Monodelphis domestica]

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 134/272 (49%), Gaps = 24/272 (8%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           K +EC+LC ++F  +  L  H R  H ++           C+ C + F  +A +  H   
Sbjct: 349 KPFECNLCGKAFTERSTLTVHER-IHTVEKPFQ-------CNQCGKKFTQRASLIVHQ-R 399

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVH 182
            H  EK Y+C+ CG   R       H R     KP    C  C + FT+K  L  H  +H
Sbjct: 400 VHTGEKPYECNLCGKAFRLSNHLNVHQRIHTGEKP--YECNLCGKAFTRKVGLTVHQRIH 457

Query: 183 KIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGAL 242
              K ++C  C K + HK +L  H           +RT   ++ + C++CGK++  +  L
Sbjct: 458 TGEKPFECNQCGKAFRHKYSLVTH-----------QRTHTGEKPYECNLCGKAFTERSTL 506

Query: 243 TEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH 301
           T H QR H G+KP  C +CGK   ++ +L  H   HTG KP+ C  CG+++  + +L VH
Sbjct: 507 TVH-QRMHTGEKPYECNLCGKAFTERSTLTGHQRMHTGEKPYDCNFCGKAFRLSNHLNVH 565

Query: 302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTG+    C+LC + F +RS+ T+H + H
Sbjct: 566 QRIHTGDKPFECNLCGKAFTERSTLTIHQRIH 597

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
UNIPROTKB|B1AKS7	420	ZNF25 "Zinc finger protein 25"	0.816	0.666	0.340	2.1e-38
UNIPROTKB|P17030	456	ZNF25 "Zinc finger protein 25"	0.816	0.614	0.340	2.1e-38
UNIPROTKB|F1MKQ4	741	F1MKQ4 "Uncharacterized protei	0.819	0.379	0.328	2.5e-38
ZFIN|ZDB-GENE-080220-13	381	zgc:171901 "zgc:171901" [Danio	0.679	0.611	0.350	7e-38
UNIPROTKB|I3LFP7	434	I3LFP7 "Uncharacterized protei	0.626	0.495	0.351	2.4e-37
UNIPROTKB|F1SN91	588	ZFP37 "Uncharacterized protein	0.816	0.476	0.315	3.1e-37
ZFIN|ZDB-GENE-050913-139	436	zgc:113381 "zgc:113381" [Danio	0.825	0.649	0.313	4.9e-37
ZFIN|ZDB-GENE-080219-52	456	zgc:174564 "zgc:174564" [Danio	0.717	0.539	0.344	6.3e-37
ZFIN|ZDB-GENE-050522-337	381	zgc:110238 "zgc:110238" [Danio	0.918	0.826	0.311	1.3e-36
UNIPROTKB|I3LSS6	977	I3LSS6 "Uncharacterized protei	0.746	0.262	0.356	1.5e-36

UNIPROTKB|B1AKS7 ZNF25 "Zinc finger protein 25" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 108/317 (34%), Positives = 145/317 (45%)

Query:    38 CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHG-------- 89
             C  CG  S S  +  I + +   R K YEC  C + F +   L RHLR   G        
Sbjct:   112 CDKCGK-SFSKNEDLIRHQKIHTRDKTYECKECKKIFYHLSSLSRHLRTHAGEKPYECNQ 170

Query:    90 ------MKIKLSRH-KTKC-----VCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGS 137
                    K  L+ H KT        C  C + F  KA +  H   +H  EK Y+C  CG 
Sbjct:   171 CEKSFYQKPHLTEHQKTHTGEKPFECTECGKFFYVKAYLMVHQ-KTHTGEKPYECKECGK 229

Query:   138 QQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTY 197
                 K     H R     KP    C+ C + F++   L++H   H   K Y+C  CRK +
Sbjct:   230 AFSQKSHLTVHQRMHTGEKP--YKCKECGKFFSRNSHLKTHQRSHTGEKPYECKECRKCF 287

Query:   198 CHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV- 256
               K  LT H           +RT   ++ F C+ CGK++  K  LT+H QR+H G+KP  
Sbjct:   288 YQKSALTVH-----------QRTHTGEKPFECNKCGKTFYYKSDLTKH-QRKHTGEKPYE 335

Query:   257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
             CT CGK       L  H  THTG KP+ C+ CG+S+S  ++  +H   HTGE  + C  C
Sbjct:   336 CTECGKSFAVNSVLRLHQRTHTGEKPYACKECGKSFSQKSHFIIHQRKHTGEKPYECQEC 395

Query:   317 PQKFRQRSSYTLHYKTH 333
              + F Q+S  T H KTH
Sbjct:   396 GETFIQKSQLTAHQKTH 412

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P17030 ZNF25 "Zinc finger protein 25" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 108/317 (34%), Positives = 145/317 (45%)

Query:    38 CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHG-------- 89
             C  CG  S S  +  I + +   R K YEC  C + F +   L RHLR   G        
Sbjct:   148 CDKCGK-SFSKNEDLIRHQKIHTRDKTYECKECKKIFYHLSSLSRHLRTHAGEKPYECNQ 206

Query:    90 ------MKIKLSRH-KTKC-----VCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGS 137
                    K  L+ H KT        C  C + F  KA +  H   +H  EK Y+C  CG 
Sbjct:   207 CEKSFYQKPHLTEHQKTHTGEKPFECTECGKFFYVKAYLMVHQ-KTHTGEKPYECKECGK 265

Query:   138 QQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTY 197
                 K     H R     KP    C+ C + F++   L++H   H   K Y+C  CRK +
Sbjct:   266 AFSQKSHLTVHQRMHTGEKP--YKCKECGKFFSRNSHLKTHQRSHTGEKPYECKECRKCF 323

Query:   198 CHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV- 256
               K  LT H           +RT   ++ F C+ CGK++  K  LT+H QR+H G+KP  
Sbjct:   324 YQKSALTVH-----------QRTHTGEKPFECNKCGKTFYYKSDLTKH-QRKHTGEKPYE 371

Query:   257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
             CT CGK       L  H  THTG KP+ C+ CG+S+S  ++  +H   HTGE  + C  C
Sbjct:   372 CTECGKSFAVNSVLRLHQRTHTGEKPYACKECGKSFSQKSHFIIHQRKHTGEKPYECQEC 431

Query:   317 PQKFRQRSSYTLHYKTH 333
              + F Q+S  T H KTH
Sbjct:   432 GETFIQKSQLTAHQKTH 448

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MKQ4 F1MKQ4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 417 (151.9 bits), Expect = 2.5e-38, P = 2.5e-38
 Identities = 98/298 (32%), Positives = 136/298 (45%)

Query:    38 CRSCGLLSGSITQTYIHYLECKNRG-KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSR 96
             C  CG     I + Y+   +  + G K YEC  C  +F     LF+    KH    ++ R
Sbjct:   402 CNECGRTFSHIHKAYLIAHQRLHTGEKPYECRECGRTF----FLFKSDLTKHQ---RIHR 454

Query:    97 HKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSK 156
              +  C C  C + F SKAK+ +H   +H  E+ Y C  CG     K +   H R     +
Sbjct:   455 EEKPCECSDCKKAFRSKAKLIQHQ-RTHTRERPYGCSKCGKAFPWKSKLSLHQRTHSGER 513

Query:   157 PANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSEL 216
             P    C  C + F  K  L  H   H   K Y+C  C K +  K  L  H Q +H     
Sbjct:   514 P--FRCGVCDKAFMVKAHLTVHQRTHTGEKPYKCSDCEKAFSKKTQLLIH-QRIHTG--- 567

Query:   217 EKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMN 275
             E+     ++   C  CGK    K  L  H QR H G+KP  C+ C +    K  L  H+ 
Sbjct:   568 ERPYGCTEKSHECSECGKILSSKSTLIVH-QRTHTGEKPFKCSACDRAFTSKAHLVIHLR 626

Query:   276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTG +P+ C  C +++ST AYL +H   HTGE  + C  CPQ F Q+S+  +H +TH
Sbjct:   627 VHTGERPYECSNCEKAFSTKAYLMIHQRIHTGERPYGCSECPQAFIQKSTLIIHQRTH 684

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-080220-13 zgc:171901 "zgc:171901" [Danio rerio (taxid:7955)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 88/251 (35%), Positives = 126/251 (50%)

Query:    86 GKHGMKIKLSRH--KTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKC 143
             GK  +++ +  H  +    C +C ++F  K  ++ H+I  H  EK Y C  CG +   K 
Sbjct:    97 GKRNLEVHMRIHTGEKPFTCQHCGKSFTQKGNLKSHMII-HSGEKPYACQICGKKFAQKR 155

Query:   144 RFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNL 203
                 H+R  H  + +  +C  C + FT+K  L+SHL +H   K Y C  C+ T+  K +L
Sbjct:   156 NRADHMR-LHTGEKS-FTCNLCGKSFTQKGNLKSHLIIHSGEKPYSCQQCQSTFTQKVHL 213

Query:   204 TNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGK 262
               H++ VH   E         + F CD CGKS+  K +L  H  R H G+   +C  CGK
Sbjct:   214 EQHMK-VH-SGE---------KPFTCDQCGKSFTLKDSLGSH-MRAHTGESQFICHQCGK 261

Query:   263 MLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQ 322
                 K+S   H+  HTG +P+ C  CGRS+   A L VH+  HTGE  HTC LC + F Q
Sbjct:   262 SFNHKKSFNIHLRVHTGEEPYTCCWCGRSFRYKASLDVHIRVHTGENPHTCRLCGKSFTQ 321

Query:   323 RSSYTLHYKTH 333
             + S   H   H
Sbjct:   322 KGSLKAHMIIH 332

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|I3LFP7 I3LFP7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 370 (135.3 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 82/233 (35%), Positives = 113/233 (48%)

Query:   103 CHYCNRTFDSK-AKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLS 161
             CH C + F  + A I+ HII  H  EK Y+C  CG           H R     KP    
Sbjct:   196 CHECGKAFSHRSALIRHHII--HTGEKPYECSECGKAFNQSSYLTQHQRIHTGEKP--YE 251

Query:   162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
             C  C + F++   L  H  +H   K Y+C  C K +  +  L  H           +RT 
Sbjct:   252 CNECGKAFSQSTFLTQHQVIHTGEKPYKCNECGKAFSDRSGLIQH-----------QRTH 300

Query:   222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGL 280
               +R + C+ CGK++    ALT+H QR H G+KP  C  C K   D+ +L  H  THTG 
Sbjct:   301 TGERPYECNECGKAFGYCSALTQH-QRTHTGEKPYKCNDCAKAFSDRSALIRHQRTHTGE 359

Query:   281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
             KP+ C+ CG+++S ++ L  H   HTGE  + C  C + F Q SS + H KTH
Sbjct:   360 KPYKCKDCGKAFSQSSSLTKHQKTHTGEKPYKCKECGKAFSQSSSLSQHQKTH 412

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1SN91 ZFP37 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 401 (146.2 bits), Expect = 3.1e-37, P = 3.1e-37
 Identities = 100/317 (31%), Positives = 143/317 (45%)

Query:    38 CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKI----- 92
             C  CG+     +   +H        K YECS C ++  +K  L  HLR   G K      
Sbjct:   281 CNECGIAFSQKSHLVVHQ-RTHTGEKPYECSQCGKAHGHKHALTDHLRVHTGEKPYKCTE 339

Query:    93 --KLSRHKTKCV-------------CHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGS 137
               K  RH +  +             C  C ++F   + + EH+  +H  E  Y+C+ CG 
Sbjct:   340 CGKTFRHSSNLIQHARSHTGEKPYECKECGKSFRYNSSLTEHV-RTHTGEIPYECNECGK 398

Query:   138 QQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTY 197
               +       H+R     KP    C  C + F+KK  L  H   H   K Y+C  C K +
Sbjct:   399 AFKYSSSLTKHMRIHTGEKP--FECGECKKAFSKKSHLTIHQRTHTKEKPYKCNECGKAF 456

Query:   198 CHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPV- 256
              H  +LT H+           RT   +  F C+ CGK++ +   LT+H QR H G+KP  
Sbjct:   457 GHSSSLTYHM-----------RTHTGESPFECNQCGKAFKQIEGLTQH-QRVHTGEKPYE 504

Query:   257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
             C  CGK    K  L  H  THTG KP+ C  CG++++  + L +H   HTGE  + C+ C
Sbjct:   505 CNECGKAFSQKSHLIVHQRTHTGEKPYECNECGKAFNAKSQLIIHQRSHTGEKPYECNEC 564

Query:   317 PQKFRQRSSYTLHYKTH 333
              + F+Q +S T H KTH
Sbjct:   565 GKAFKQNASLTKHVKTH 581

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-050913-139 zgc:113381 "zgc:113381" [Danio rerio (taxid:7955)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 98/313 (31%), Positives = 141/313 (45%)

Query:    38 CRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRH 97
             C  CG          +H +       L  C  C +SF  K    +H++   G K      
Sbjct:    80 CHQCGKHFSRKQSLKVH-MGIHTGENLSTCDQCGKSFNTKSGFDKHMKTHSGEK------ 132

Query:    98 KTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP 157
                  C  C R+F  K  ++ H+ + H  EK + C+ C  + R       H R     KP
Sbjct:   133 --PFWCTECGRSFCKKYTLEMHM-AVHTGEKPFACEHCEKKFRQMGNLKAHYRVHTGEKP 189

Query:   158 ANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQ--------- 208
                +C+ C + FTKK  LRSH+  H   K + C  C K+Y  K +L  H++         
Sbjct:   190 --YTCQQCGKSFTKKTTLRSHIISHSGEKPFTCDQCGKSYACKDHLDRHMRIHTKDKYFI 247

Query:   209 ------NVHLKSELEKRTAI-LKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTIC 260
                   +  LK   ++      ++  IC+ CG+S+  + A  E H R H G+KP  CT C
Sbjct:   248 CDQCGSSFKLKENFDQHMKNHAEKSLICEQCGRSFFCE-ATYEKHMRVHTGEKPYSCTEC 306

Query:   261 GKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKF 320
             GK    K +L +HM  HTG KP  CE C + +S    LKVHM  HTGE  +TC  C + F
Sbjct:   307 GKSFSQKENLTSHMRIHTGEKPFACEYCEKRFSQLPALKVHMRVHTGEKPYTCAQCGKGF 366

Query:   321 RQRSSYTLHYKTH 333
              Q++   +H +TH
Sbjct:   367 AQKNGLKIHMRTH 379

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-080219-52 zgc:174564 "zgc:174564" [Danio rerio (taxid:7955)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 93/270 (34%), Positives = 129/270 (47%)

Query:    65 YECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSH 124
             + C  C +SF  ++    H++   G K           C  C++ F  K  + EH+   H
Sbjct:    58 FTCPQCGKSFSCEQSFNLHIKFHRGTK--------PYECDQCDKIFTLKTNLNEHM-KIH 108

Query:   125 MHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKI 184
               E LY CD CG     K R   HL+   + KP   +C+ C + F  K  L  H+ +H  
Sbjct:   109 NVEMLYTCDQCGKSFLLKERLNKHLKIHTVEKP--FTCDQCGKNFLHKGYLTEHIKIHTG 166

Query:   185 GKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTE 244
              K + C  C K + +K NLT+H++ VH        T   +R + CD C K +  KG L E
Sbjct:   167 EKPHTCDQCGKRFAYKGNLTDHMK-VH--------TG--ERPYACDQCAKRFKHKGNLIE 215

Query:   245 HHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS 303
             H  + H G++P  C  CGK    K  L +HM  HTG KP  CE CGRSY+    L  HM 
Sbjct:   216 H-VKIHTGERPYSCDQCGKKFKLKHILNDHMRIHTGEKPFTCEKCGRSYTRKRNLSDHMK 274

Query:   304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
              HTG   HTC  C + F +   + +H +TH
Sbjct:   275 SHTGVKLHTCDQCGKSFVKTGVFKVHLRTH 304

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050522-337 zgc:110238 "zgc:110238" [Danio rerio (taxid:7955)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 112/359 (31%), Positives = 158/359 (44%)

Query:     9 DLKVENTVYRIKSKD---------LLASFSS-DVWDEERCRSCGLLSGSITQTYIHYLEC 58
             DLK+E+T + +K +D         L   F   +  +E +C     L+     T    L  
Sbjct:    10 DLKIEDT-FSVKHEDPEEQTELMVLKEEFQDLNEMEESQCERHQDLTTDEKSTPKKSLPH 68

Query:    59 KNRGKL-YECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQ 117
             K   K  + C +C + F  +  L  H+R   G K+          C  C ++F  K+KI 
Sbjct:    69 KRVQKNNFTCCVCGKCFSQRHSLKVHMRIHTGDKL--------FTCDQCGKSFTQKSKID 120

Query:   118 EHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRS 177
              H+   H  E+ Y C  C    R K     H+R     KP    C  C + F + + L+S
Sbjct:   121 VHM-RVHTSERHYSCPQCAKGFRQKQHLKLHMRIHSGEKP--FPCNQCGKRFNQLQALQS 177

Query:   178 HLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHL----------------KSELEKRTA 221
             H  +H   + Y C  C K++  +P+L  H++ VH                 K  L+    
Sbjct:   178 HFTIHSGERPYACTQCEKSFRQRPSLEKHLK-VHSREKPFTCSQCGNGFTQKERLQNHMR 236

Query:   222 ILKRE--FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHT 278
             I   E  F C  C K++  +  L   H R H G+KP VCT CGK    K SL  HM THT
Sbjct:   237 IHTGEKPFACPHCEKTFAHRSNLY-FHVRTHSGEKPFVCTHCGKSFRCKNSLVGHMRTHT 295

Query:   279 GLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV 337
             G KP  C+ CG+S+S    LK HMS HTGE  +TC  C + F ++ S   H   H  G+
Sbjct:   296 GEKPFACDQCGKSFSREFNLKCHMSNHTGEKPYTCGQCGKSFVRKDSLNRHELIHSKGI 354

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|I3LSS6 I3LSS6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 404 (147.3 bits), Expect = 1.5e-36, P = 1.5e-36
 Identities = 104/292 (35%), Positives = 140/292 (47%)

Query:    63 KLYECSLCNESFENKKVLFRHLR-------------GKH-GMKIKLSRH-KTKC-----V 102
             K YEC  C ++F  K  L  H R             GK    K  LS+H +T        
Sbjct:   435 KPYECYECGKTFCLKSDLTVHQRTHTGEKPFACSECGKFFSHKSTLSQHYRTHTGEKPYE 494

Query:   103 CHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSC 162
             CH C + F +K+ + +H   +H  EK Y+C  CG     K +   H R     KP    C
Sbjct:   495 CHECGKIFYNKSYLTKHN-RTHTGEKPYECSECGKTFCQKSQLTQHQRIHIGEKP--YEC 551

Query:   163 EFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAI 222
               C + F  K  L  H   H   K Y+C  C K++C K  LT H Q  H        T  
Sbjct:   552 SECGKAFCHKSALIVHQRTHTEEKPYKCNECGKSFCVKSGLTLH-QRKH--------TG- 601

Query:   223 LKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLK 281
              ++ + C+ CGKS+  K +LT HH R H G+K   C  CGK+   K  LA H  +HTG K
Sbjct:   602 -EKPYECNECGKSFSHKSSLTVHH-RAHTGEKSCQCNECGKVFYRKSDLAKHQRSHTGEK 659

Query:   282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
             P+ C +CG+++S  + L VH   HTGE  + CH C + F Q+SS+T H +TH
Sbjct:   660 PYECNVCGKTFSQKSNLIVHQRTHTGEEPYKCHKCGKTFNQKSSHTRHQRTH 711

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG1074|consensus	958		99.96
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.95
KOG3608|consensus	467		99.95
KOG3608|consensus	467		99.94
KOG3623|consensus	1007		99.91
KOG2462|consensus	279		99.89
KOG3623|consensus	1007		99.83
KOG3576|consensus	267		99.72
KOG3576|consensus	267		99.65
PLN03086	567	PRLI-interacting factor K; Provisional	99.29
PHA00733	128	hypothetical protein	99.2
PLN03086	567	PRLI-interacting factor K; Provisional	99.19
PHA00733	128	hypothetical protein	99.0
PHA02768	55	hypothetical protein; Provisional	98.91
KOG3993|consensus	500		98.89
KOG3993|consensus	500		98.89
PHA02768	55	hypothetical protein; Provisional	98.69
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.62
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.53
PHA00616	44	hypothetical protein	98.43
PHA00732	79	hypothetical protein	98.43
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.42
PHA00616	44	hypothetical protein	98.33
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.32
PHA00732	79	hypothetical protein	98.04
KOG1146|consensus	1406		97.97
KOG1146|consensus	1406		97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.92
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.89
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.82
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.75
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.7
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.69
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.58
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.57
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.45
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.3
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.04
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.95
KOG2482|consensus	423		96.93
KOG2231|consensus	669		96.9
KOG2231|consensus	669		96.85
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.78
smart00355	26	ZnF_C2H2 zinc finger.	96.77
smart00355	26	ZnF_C2H2 zinc finger.	96.76
KOG2482|consensus	423		96.74
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.64
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.63
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.6
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.53
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.5
PRK04860	160	hypothetical protein; Provisional	96.42
KOG2785|consensus	390		96.42
KOG4173|consensus	253		96.32
KOG2785|consensus	390		96.19
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.13
KOG2893|consensus	341		96.0
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.75
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.08
KOG4173|consensus	253		94.87
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.4
PRK04860	160	hypothetical protein; Provisional	94.05
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.5
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.18
COG4049	65	Uncharacterized protein containing archaeal-type C	92.93
COG4049	65	Uncharacterized protein containing archaeal-type C	92.51
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.47
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.42
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.1
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.73
KOG2893|consensus	341		91.12
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	90.7
COG5048	467	FOG: Zn-finger [General function prediction only]	90.02
PF12907	40	zf-met2: Zinc-binding	89.83
COG5048	467	FOG: Zn-finger [General function prediction only]	89.28
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	88.45
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.81
PF12907	40	zf-met2: Zinc-binding	86.47
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	84.39
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	84.29
PF06524	314	NOA36: NOA36 protein; InterPro: IPR010531 This fam	83.87
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	83.74
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	83.58
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	83.45
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	83.16
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	83.08
COG1996	49	RPC10 DNA-directed RNA polymerase, subunit RPC10 (	82.64
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	81.16
KOG2807|consensus	378		80.46
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.43
smart00531	147	TFIIE Transcription initiation factor IIE.	80.22

>KOG1074|consensus

Probab=99.96  E-value=3.2e-31  Score=236.47  Aligned_cols=173  Identities=28%  Similarity=0.614  Sum_probs=148.0

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccC---ccCccc
Q psy4574         160 LSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICD---VCGKSY  236 (343)
Q Consensus       160 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~---~C~~~f  236 (343)
                      .+|-.|.++....++|+.|.+.|.|++||+|.+|++.|.++.+|+.|+-.|.       ..+...-.+.|+   +|.+.|
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk-------a~p~~R~q~ScP~~~ic~~kf  678 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK-------AKPPARVQFSCPSTFICQKKF  678 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccc-------cCccccccccCCchhhhcccc
Confidence            7899999999999999999999999999999999999999999999985543       233334668999   999999


Q ss_pred             cchhHHHHHHhhhcCC-CC-------------cccccccccCCChHHHHHHHHhhcCC----------------------
Q psy4574         237 VRKGALTEHHQREHQG-KK-------------PVCTICGKMLIDKRSLANHMNTHTGL----------------------  280 (343)
Q Consensus       237 ~~~~~l~~H~~~~h~~-~~-------------~~C~~C~~~f~~~~~l~~H~~~h~~~----------------------  280 (343)
                      ...-.|..|+ +.|.+ ..             -+|..|.+.|.....+..++..|.+.                      
T Consensus       679 tn~V~lpQhI-riH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~  757 (958)
T KOG1074|consen  679 TNAVTLPQHI-RIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPP  757 (958)
T ss_pred             cccccccceE-EeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCC
Confidence            9999999997 66542 11             17999999998888877777655211                      


Q ss_pred             --------------------------------------------------------------------------------
Q psy4574         281 --------------------------------------------------------------------------------  280 (343)
Q Consensus       281 --------------------------------------------------------------------------------  280 (343)
                                                                                                      
T Consensus       758 ~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l  837 (958)
T KOG1074|consen  758 PPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSML  837 (958)
T ss_pred             ccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------------------CceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccc
Q psy4574         281 ----------------------------------------KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKF  320 (343)
Q Consensus       281 ----------------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  320 (343)
                                                              ....|.+||+.|...++|..|+++|.+.|+|.|..|++.|
T Consensus       838 ~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aF  917 (958)
T KOG1074|consen  838 NEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAF  917 (958)
T ss_pred             ccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhh
Confidence                                                    1167999999999999999999999999999999999999


Q ss_pred             cCchhHHhHHhhcCCCCCCC
Q psy4574         321 RQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       321 ~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ..+.+|..||.+|+...|+.
T Consensus       918 ttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  918 TTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             hhhhhhhhhhccccccCCCc
Confidence            99999999999999887764

>KOG1074|consensus

Probab=99.95  E-value=9.4e-30  Score=227.21  Aligned_cols=213  Identities=27%  Similarity=0.526  Sum_probs=158.4

Q ss_pred             CCccccccccccccChHHHHHHHHhcCCCCCcccCCcCcccccchhHHHhHHhhccCCCC--CCcccc---ccccccCCH
Q psy4574          98 KTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP--ANLSCE---FCSRIFTKK  172 (343)
Q Consensus        98 ~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~--~~~~C~---~C~~~f~~~  172 (343)
                      ..+-.|-+|.++..-...|+.|. +.|.++++|+|.+||+-|.++.+|+.||..|-...+  .++.|+   +|...|...
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHy-rtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHY-RTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             CCccceeeeeecccchhhhhhhh-hcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccc
Confidence            34557999999999999999999 999999999999999999999999999988765443  458999   999999999


Q ss_pred             HHHHHHHHHhCCC-------------CcccccccccccCCchHHHhHHHhhccch-----hHHHHhhhcCC----ccccC
Q psy4574         173 ELLRSHLAVHKIG-------------KNYQCYYCRKTYCHKPNLTNHIQNVHLKS-----ELEKRTAILKR----EFICD  230 (343)
Q Consensus       173 ~~l~~H~~~h~~~-------------~~~~C~~C~~~~~~~~~l~~H~~~~h~~~-----~~~~~~~~~~~----~~~C~  230 (343)
                      ..|..|+++|.+.             ..-+|..|.+.|.+...+..++..+-+..     ...........    +..+.
T Consensus       682 V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~  761 (958)
T KOG1074|consen  682 VTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPEN  761 (958)
T ss_pred             ccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcccc
Confidence            9999999999743             12589999999999888888887663221     00001111111    22222


Q ss_pred             ccCccccchhHHHHHHh----------------------------------------------------h----------
Q psy4574         231 VCGKSYVRKGALTEHHQ----------------------------------------------------R----------  248 (343)
Q Consensus       231 ~C~~~f~~~~~l~~H~~----------------------------------------------------~----------  248 (343)
                      .|+..+.....+..+-.                                                    .          
T Consensus       762 ~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~  841 (958)
T KOG1074|consen  762 SCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGL  841 (958)
T ss_pred             ccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccc
Confidence            33322222211111100                                                    0          


Q ss_pred             -------hc-------------------CC------CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHH
Q psy4574         249 -------EH-------------------QG------KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAA  296 (343)
Q Consensus       249 -------~h-------------------~~------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  296 (343)
                             .+                   .+      ..-.|..|++.|.+.+.|..|+++|++++||.|.+|+++|..+.
T Consensus       842 ~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrg  921 (958)
T KOG1074|consen  842 ATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRG  921 (958)
T ss_pred             ccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhh
Confidence                   00                   00      01159999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCCCCcc
Q psy4574         297 YLKVHMSCHTGETSH  311 (343)
Q Consensus       297 ~l~~H~~~h~~~~~~  311 (343)
                      +|..||.+|....++
T Consensus       922 nLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  922 NLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhccccccCCC
Confidence            999999999876543

>KOG2462|consensus

Probab=99.95  E-value=7.6e-29  Score=195.84  Aligned_cols=139  Identities=35%  Similarity=0.645  Sum_probs=127.1

Q ss_pred             CCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCccccccccc
Q psy4574         184 IGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKM  263 (343)
Q Consensus       184 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~  263 (343)
                      ....|+|+.|++.+.+.++|-+|.|.|-+        ...++.+.|+.|++.|.+-.+|++|+ +.|. -+.+|.+||+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~--------~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~-l~c~C~iCGKa  196 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRS--------LDSKKAFSCKYCGKVYVSMPALKMHI-RTHT-LPCECGICGKA  196 (279)
T ss_pred             cCCceeccccccccccccccchhhccccc--------ccccccccCCCCCceeeehHHHhhHh-hccC-CCccccccccc
Confidence            34568999999999999999999887643        33478899999999999999999998 7775 55699999999


Q ss_pred             CCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhh
Q psy4574         264 LIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       264 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      |...=.|+.|+++|+|||||.|+.|+++|.++++|+.||++|.+.++|+|+.|++.|+.++-|..|...
T Consensus       197 FSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  197 FSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999864

>KOG3608|consensus

Probab=99.95  E-value=5.4e-27  Score=190.11  Aligned_cols=228  Identities=25%  Similarity=0.496  Sum_probs=184.9

Q ss_pred             ccc--cccccccCChHHHHHHhhhhcCCccccc-----CCCCcccc--ccccccccChHHHHHHHHhcCCCCCcccCCcC
Q psy4574          65 YEC--SLCNESFENKKVLFRHLRGKHGMKIKLS-----RHKTKCVC--HYCNRTFDSKAKIQEHIISSHMHEKLYQCDFC  135 (343)
Q Consensus        65 ~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~-----~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C  135 (343)
                      |.|  ..|+..|.+...+..|+..|.-...+.+     +....+-|  ..|-+.|.++..|++|+ +.|++++...|+.|
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~-r~Hs~eKvvACp~C  213 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHI-RTHSNEKVVACPHC  213 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHH-HhcCCCeEEecchH
Confidence            666  5699999999999999888776433311     11223345  45889999999999999 88999999999999


Q ss_pred             cccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCcccccccccccCCchHHHhHHHhhccchh
Q psy4574         136 GSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSE  215 (343)
Q Consensus       136 ~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~  215 (343)
                      |..|.++..|..|++.........|+|..|.+.|.+...|..|+..|-  ..|+|+.|+......++|..|++..|    
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rH----  287 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRH----  287 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhh----
Confidence            999999999999998887766667899999999999999999999884  67899999999999999999986544    


Q ss_pred             HHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCccccc--ccccCCChHHHHHHHHhhc-CC--CceeCCccCc
Q psy4574         216 LEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTI--CGKMLIDKRSLANHMNTHT-GL--KPHCCEICGR  290 (343)
Q Consensus       216 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~--~~~~C~~C~~  290 (343)
                            ...++|+|+.|++.+.+.++|..|+ ..|+...|.|..  |.+.+.+...|+.|++.++ |.  -+|.|..|++
T Consensus       288 ------s~dkpfKCd~Cd~~c~~esdL~kH~-~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr  360 (467)
T KOG3608|consen  288 ------SKDKPFKCDECDTRCVRESDLAKHV-QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDR  360 (467)
T ss_pred             ------ccCCCccccchhhhhccHHHHHHHH-HhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchh
Confidence                  4468899999999999999999997 688877788866  8888888888888877654 33  4588888888


Q ss_pred             ccCCHHHHHHHhhhcC
Q psy4574         291 SYSTAAYLKVHMSCHT  306 (343)
Q Consensus       291 ~f~~~~~l~~H~~~h~  306 (343)
                      .|....+|-+|+...+
T Consensus       361 ~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  361 FFTSGKSLSAHLMKKH  376 (467)
T ss_pred             hhccchhHHHHHHHhh
Confidence            8888888888875443

>KOG3608|consensus

Probab=99.94  E-value=1.9e-26  Score=186.90  Aligned_cols=261  Identities=25%  Similarity=0.447  Sum_probs=214.2

Q ss_pred             cccc--cccccccCC-hHHHHHHhhhhcC-------------CcccccC-------------CCCcccc--ccccccccC
Q psy4574          64 LYEC--SLCNESFEN-KKVLFRHLRGKHG-------------MKIKLSR-------------HKTKCVC--HYCNRTFDS  112 (343)
Q Consensus        64 ~~~C--~~C~~~~~~-~~~l~~H~~~~~~-------------~~~~~~~-------------~~~~~~C--~~C~~~f~~  112 (343)
                      .+.|  ..|+....+ ...|.+|+--|--             ..+.+..             ....|.|  ..|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            5777  458888877 5888888763311             0000000             0233556  559999999


Q ss_pred             hHHHHHHHHhcCCC------------C-CcccC--CcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHH
Q psy4574         113 KAKIQEHIISSHMH------------E-KLYQC--DFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRS  177 (343)
Q Consensus       113 ~~~l~~H~~~~H~~------------~-~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  177 (343)
                      ...+.+|+ ..|..            + ..+.|  ..|.+.+.++..|++|++.|.+++..  .|+.|+.-|.....|-.
T Consensus       149 ~~ef~dHV-~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvv--ACp~Cg~~F~~~tkl~D  225 (467)
T KOG3608|consen  149 IVEFQDHV-VKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVV--ACPHCGELFRTKTKLFD  225 (467)
T ss_pred             HHHHHHHH-HHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEE--ecchHHHHhccccHHHH
Confidence            99999998 66632            1 22455  45999999999999999999999886  99999999999999999


Q ss_pred             HHHHhC--CCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCC-
Q psy4574         178 HLAVHK--IGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKK-  254 (343)
Q Consensus       178 H~~~h~--~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~-  254 (343)
                      |++..+  ...+|+|..|.+.|.++..|..|+..+           .  ..|+|+.|+.+....+.|.+|++-.|+..+ 
T Consensus       226 H~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rH-----------v--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  226 HLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRH-----------V--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHh-----------h--hcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            987654  456899999999999999999998543           2  459999999999999999999987787654 


Q ss_pred             cccccccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhcC-CC--CcccCCCCcccccCchhHHhH
Q psy4574         255 PVCTICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHT-GE--TSHTCHLCPQKFRQRSSYTLH  329 (343)
Q Consensus       255 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~--~~~~C~~C~~~f~~~~~l~~H  329 (343)
                      ++|..|++.+...+.|.+|+..|. +-.|+|..  |.+.|.+..+|..|++.++ |.  .+|.|-.|++.|++-.+|.+|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~H  371 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAH  371 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHH
Confidence            599999999999999999999887 57799998  9999999999999997766 43  469999999999999999999


Q ss_pred             HhhcCCCCCCCC
Q psy4574         330 YKTHHPGVIPPK  341 (343)
Q Consensus       330 ~~~~h~~~~~~~  341 (343)
                      ++..|+-.+++.
T Consensus       372 L~kkH~f~~PsG  383 (467)
T KOG3608|consen  372 LMKKHGFRLPSG  383 (467)
T ss_pred             HHHhhcccCCCC
Confidence            999999877654

>KOG3623|consensus

Probab=99.91  E-value=1.5e-24  Score=191.09  Aligned_cols=117  Identities=21%  Similarity=0.358  Sum_probs=103.1

Q ss_pred             ccccCcccccccChhHHHHHHHHhcCC-CCcccccccccccCChHHHHHHhhhhcCCcccccC-----CCCccccccccc
Q psy4574          35 EERCRSCGLLSGSITQTYIHYLECKNR-GKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSR-----HKTKCVCHYCNR  108 (343)
Q Consensus        35 ~~~C~~C~~~~~~~~~l~~H~~~~h~~-~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~-----~~~~~~C~~C~~  108 (343)
                      .++|+.|...+.....|..|.+..|.. +..|.|..|.++|..+..|.+||..|.+.......     ...+|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            478999999999999999998888865 45699999999999999999999999886655322     267899999999


Q ss_pred             cccChHHHHHHHHhcCCCCCcccCCcCcccccchhHHHhHHhhc
Q psy4574         109 TFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDK  152 (343)
Q Consensus       109 ~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~  152 (343)
                      .|.-.-.|..|+ ++|.|+++|.|+.|++.|........||...
T Consensus       290 AFKfKHHLKEHl-RIHSGEKPfeCpnCkKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  290 AFKFKHHLKEHL-RIHSGEKPFECPNCKKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             hhhhHHHHHhhh-eeecCCCCcCCcccccccccCCccccccccc
Confidence            999999999999 9999999999999999999888888887654

>KOG2462|consensus

Probab=99.89  E-value=1.6e-23  Score=165.87  Aligned_cols=132  Identities=26%  Similarity=0.623  Sum_probs=85.7

Q ss_pred             CccccccccccccChHHHHHHHHhcCC---CCCcccCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHH
Q psy4574          99 TKCVCHYCNRTFDSKAKIQEHIISSHM---HEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELL  175 (343)
Q Consensus        99 ~~~~C~~C~~~f~~~~~l~~H~~~~H~---~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l  175 (343)
                      ..|.|..|++.+.+...|.+|. ..|.   ..+.+.|++|++.+.+...|..|+++|..    ...|.+||+.|.....|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHk-Q~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l----~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHK-QTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTL----PCECGICGKAFSRPWLL  203 (279)
T ss_pred             Cceeccccccccccccccchhh-cccccccccccccCCCCCceeeehHHHhhHhhccCC----CcccccccccccchHHh
Confidence            3445666666666666666665 5553   23446666666666666666666666652    24677777777666667


Q ss_pred             HHHHHHhCCCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHH
Q psy4574         176 RSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHH  246 (343)
Q Consensus       176 ~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  246 (343)
                      +-|++.|+|++||.|+.|++.|.++++|+.||           .++.+.+.|+|+.|++.|...+.|..|.
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm-----------QTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM-----------QTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHH-----------HhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            77777777777777777777777777777776           4455556677777777777777777775

>KOG3623|consensus

Probab=99.83  E-value=3e-21  Score=170.55  Aligned_cols=111  Identities=23%  Similarity=0.553  Sum_probs=93.2

Q ss_pred             ccccccccccccChHHHHHHHHhcCC-CCCcccCCcCcccccchhHHHhHHhhccCCCC-----------CCcccccccc
Q psy4574         100 KCVCHYCNRTFDSKAKIQEHIISSHM-HEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP-----------ANLSCEFCSR  167 (343)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~H~~~~H~-~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~-----------~~~~C~~C~~  167 (343)
                      ...|+.|+..+...+.|..|+...|- .+..|.|..|.++|.++..|.+||..|....+           ..|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            45799999999999999999877774 45678899999999999999999988764332           2489999999


Q ss_pred             ccCCHHHHHHHHHHhCCCCcccccccccccCCchHHHhHHHhh
Q psy4574         168 IFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNV  210 (343)
Q Consensus       168 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~  210 (343)
                      .|..+-.|+.|+++|.|++||.|+.|.+.|....++-.||.+.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSSK  332 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSSK  332 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccccc
Confidence            9999999999999999999999999999998888888887543

>KOG3576|consensus

Probab=99.72  E-value=1.1e-18  Score=131.44  Aligned_cols=118  Identities=31%  Similarity=0.611  Sum_probs=105.0

Q ss_pred             hhhcCCccccCccCccccchhHHHHHHhhhcCC-CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHH
Q psy4574         220 TAILKREFICDVCGKSYVRKGALTEHHQREHQG-KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYL  298 (343)
Q Consensus       220 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  298 (343)
                      ...+...|.|..|++.|.....|.+|+ .-|.. +.+.|..||+.|.....|.+|+++|+|.+||+|..|+++|.+.-+|
T Consensus       111 sssd~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsl  189 (267)
T KOG3576|consen  111 SSSDQDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSL  189 (267)
T ss_pred             CCCCCCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccH
Confidence            445567899999999999999999998 55654 5569999999999999999999999999999999999999999999


Q ss_pred             HHHhh-hcCC----------CCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         299 KVHMS-CHTG----------ETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       299 ~~H~~-~h~~----------~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      ..|++ +|..          .+.|.|..||+.......+..|+..+|+..|
T Consensus       190 eshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            99995 4543          3579999999999999999999999999865

>KOG3576|consensus

Probab=99.65  E-value=6.5e-17  Score=121.87  Aligned_cols=129  Identities=21%  Similarity=0.404  Sum_probs=101.7

Q ss_pred             CCCCcccCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCcccccccccccCCchHHH
Q psy4574         125 MHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLT  204 (343)
Q Consensus       125 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~  204 (343)
                      .+...|.|.+|++.|.-...|.+|++-|..-+  .+.|..||+.|.+.-+|++|+++|+|.+||+|..|++.|+++-+|.
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~~vk--r~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVK--RHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhccHHH--HHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHH
Confidence            34556788888888888888888887766433  3588889999988889999999999999999999999999999999


Q ss_pred             hHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCc
Q psy4574         205 NHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP  255 (343)
Q Consensus       205 ~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  255 (343)
                      .|++..|+......-.....+.|.|..||.+-.....+..|+..+|...++
T Consensus       191 shl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  191 SHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            999888877644444445567889999998888888888888666655443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.29  E-value=1.1e-11  Score=111.20  Aligned_cols=146  Identities=22%  Similarity=0.481  Sum_probs=113.7

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCCcccccc--cccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCcccc
Q psy4574         160 LSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYY--CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYV  237 (343)
Q Consensus       160 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~  237 (343)
                      ..|+.|.+.... ..|..|..... .....|+.  |+..|. +..+..|                    +.|+.|++.|.
T Consensus       408 V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H--------------------~~C~~Cgk~f~  464 (567)
T PLN03086        408 VECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLR-VEEAKNH--------------------VHCEKCGQAFQ  464 (567)
T ss_pred             EECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceee-ccccccC--------------------ccCCCCCCccc
Confidence            479999887654 44567875543 45567884  998883 3334444                    58999999996


Q ss_pred             chhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCC----------HHHHHHHhhhcCC
Q psy4574         238 RKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYST----------AAYLKVHMSCHTG  307 (343)
Q Consensus       238 ~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~----------~~~l~~H~~~h~~  307 (343)
                       ...|..|....|  .++.|+ |+..+ .+..|..|+..|.+.+++.|..|++.|..          ...|..|..+. |
T Consensus       465 -~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G  538 (567)
T PLN03086        465 -QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-G  538 (567)
T ss_pred             -hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-C
Confidence             678999985554  677999 99755 67899999999999999999999999852          45899998884 8


Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .+++.|..||+.+..+ .|..|+-.-|.
T Consensus       539 ~rt~~C~~Cgk~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        539 SRTAPCDSCGRSVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             CcceEccccCCeeeeh-hHHHHHHHhhc
Confidence            8999999999998665 48889877664

>PHA00733 hypothetical protein

Probab=99.20  E-value=2.2e-11  Score=89.17  Aligned_cols=83  Identities=23%  Similarity=0.451  Sum_probs=63.5

Q ss_pred             CCcccccccccCCChHHHHHH--HH---hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHH
Q psy4574         253 KKPVCTICGKMLIDKRSLANH--MN---THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYT  327 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  327 (343)
                      +++.|.+|...|.....|..+  +.   .+.+.+||.|..|++.|.....|..|+..|  ..+|.|+.|++.|.....|.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~  116 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTL  116 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHH
Confidence            344666666666655555444  11   234578999999999999999999999876  35789999999999999999


Q ss_pred             hHHhhcCCCC
Q psy4574         328 LHYKTHHPGV  337 (343)
Q Consensus       328 ~H~~~~h~~~  337 (343)
                      .|+...|+..
T Consensus       117 ~H~~~~h~~~  126 (128)
T PHA00733        117 DHVCKKHNIC  126 (128)
T ss_pred             HHHHHhcCcc
Confidence            9999998764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.19  E-value=6.8e-11  Score=106.23  Aligned_cols=101  Identities=25%  Similarity=0.481  Sum_probs=53.2

Q ss_pred             cCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCcccccccccccCC----------c
Q psy4574         131 QCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCH----------K  200 (343)
Q Consensus       131 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~----------~  200 (343)
                      .|+.|++.|. ...|..|+..+|  .+  +.|+ |+..+ ....|..|+..|.+.+++.|+.|+..+..          .
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kp--v~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EP--LQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CC--ccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhh
Confidence            5666665553 455566655544  22  3565 65433 44556666666666666666666655531          1


Q ss_pred             hHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcC
Q psy4574         201 PNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQ  251 (343)
Q Consensus       201 ~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  251 (343)
                      +.|..|.           .. -+.+++.|..|++.+. ..+|..|+...|.
T Consensus       528 s~Lt~HE-----------~~-CG~rt~~C~~Cgk~Vr-lrdm~~H~~~~h~  565 (567)
T PLN03086        528 RGMSEHE-----------SI-CGSRTAPCDSCGRSVM-LKEMDIHQIAVHQ  565 (567)
T ss_pred             hhHHHHH-----------Hh-cCCcceEccccCCeee-ehhHHHHHHHhhc
Confidence            2445553           22 2555666666665553 3345556555443

>PHA00733 hypothetical protein

Probab=99.00  E-value=4.4e-10  Score=82.32  Aligned_cols=84  Identities=17%  Similarity=0.264  Sum_probs=62.9

Q ss_pred             hcCCccccCccCccccchhHHHHH-----HhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHH
Q psy4574         222 ILKREFICDVCGKSYVRKGALTEH-----HQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAA  296 (343)
Q Consensus       222 ~~~~~~~C~~C~~~f~~~~~l~~H-----~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  296 (343)
                      ..++++.|.+|...|.....|..+     ....+...++.|+.|++.|.+...|..|++.+  ..+|.|.+|+++|....
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~  113 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTD  113 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHH
Confidence            345667777777666665555443     12455667779999999999999999998876  35689999999999999


Q ss_pred             HHHHHhhhcCC
Q psy4574         297 YLKVHMSCHTG  307 (343)
Q Consensus       297 ~l~~H~~~h~~  307 (343)
                      .|..|+...++
T Consensus       114 sL~~H~~~~h~  124 (128)
T PHA00733        114 STLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHhcC
Confidence            99999876554

>PHA02768 hypothetical protein; Provisional

Probab=98.91  E-value=7.3e-10  Score=66.30  Aligned_cols=43  Identities=23%  Similarity=0.420  Sum_probs=35.1

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHH
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYT  327 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  327 (343)
                      |+|+.||+.|...++|..|+++|.  ++|+|..|++.|...+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            788888888888888888888887  6788888888888777664

>KOG3993|consensus

Probab=98.89  E-value=1.7e-10  Score=97.11  Aligned_cols=177  Identities=19%  Similarity=0.300  Sum_probs=99.1

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCCcccccccccccCCchHHHhHHHhhccchhHH----------------------
Q psy4574         160 LSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELE----------------------  217 (343)
Q Consensus       160 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~----------------------  217 (343)
                      |.|..|...|.+.-.|.+|.-.-.-..-|+|+.|++.|....+|..|.++|.+.....                      
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            4455554444444444444322222233555555555555555555554444332111                      


Q ss_pred             HHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCc-----------------ccccccccCCChHHHHHHHHhhc-C
Q psy4574         218 KRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-----------------VCTICGKMLIDKRSLANHMNTHT-G  279 (343)
Q Consensus       218 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-----------------~C~~C~~~f~~~~~l~~H~~~h~-~  279 (343)
                      ......+..|.|..|++.|.+...|+.|...+|.....                 .+..|.-.+.-...-..++..+. .
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence            01112234699999999999999999997566543222                 23333332222222111111111 1


Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ...-.|+.|+..+..+..--.+.+.-..+..|.|.+|.-.|-+...|.+|+...|+-
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hps  484 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPS  484 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChH
Confidence            122467888877776665555555555566789999999999999999999988864

>KOG3993|consensus

Probab=98.89  E-value=2.8e-10  Score=95.89  Aligned_cols=58  Identities=17%  Similarity=0.162  Sum_probs=46.8

Q ss_pred             ccccccCcccccccChhHHHHHHHHhcCCCCcccccccccccCChHHHHHHhhhhcCCc
Q psy4574          33 WDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMK   91 (343)
Q Consensus        33 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~   91 (343)
                      ...|.|.+|...|.....|..| +=.--..-.|+|++|++.|+-..+|..|-+=|-+..
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQH-rC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~  322 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQH-RCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRP  322 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhc-cCCeeEEeeecCCcccccccCchhhhhhhcccCCch
Confidence            4569999999999999999999 222222345999999999999999999988665533

>PHA02768 hypothetical protein; Provisional

Probab=98.69  E-value=8.1e-09  Score=61.85  Aligned_cols=44  Identities=23%  Similarity=0.436  Sum_probs=34.8

Q ss_pred             CcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHH
Q psy4574         254 KPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLK  299 (343)
Q Consensus       254 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  299 (343)
                      .|.|+.||+.|...+.|..|++.|+  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3578888888888888888888887  6788888888887666553

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.62  E-value=2e-08  Score=51.29  Aligned_cols=24  Identities=42%  Similarity=0.834  Sum_probs=13.2

Q ss_pred             HHHHhhhcCCCCcccCCCCccccc
Q psy4574         298 LKVHMSCHTGETSHTCHLCPQKFR  321 (343)
Q Consensus       298 l~~H~~~h~~~~~~~C~~C~~~f~  321 (343)
                      |.+|+++|.++++|.|++|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555553

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.53  E-value=6.6e-08  Score=49.39  Aligned_cols=26  Identities=54%  Similarity=0.985  Sum_probs=23.6

Q ss_pred             HHHHHHHhhcCCCceeCCccCcccCC
Q psy4574         269 SLANHMNTHTGLKPHCCEICGRSYST  294 (343)
Q Consensus       269 ~l~~H~~~h~~~~~~~C~~C~~~f~~  294 (343)
                      +|..|++.|++++||.|++|++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999863

...

>PHA00616 hypothetical protein

Probab=98.43  E-value=9.4e-08  Score=54.38  Aligned_cols=33  Identities=15%  Similarity=0.195  Sum_probs=18.0

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      ||+|+.||+.|...++|..|++.|++++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355555555555555555555555555555443

>PHA00732 hypothetical protein

Probab=98.43  E-value=2.1e-07  Score=61.59  Aligned_cols=35  Identities=34%  Similarity=0.733  Sum_probs=16.9

Q ss_pred             ccccccccCCChHHHHHHHHh-hcCCCceeCCccCcccC
Q psy4574         256 VCTICGKMLIDKRSLANHMNT-HTGLKPHCCEICGRSYS  293 (343)
Q Consensus       256 ~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~  293 (343)
                      .|..|++.|.+...|..|++. |.   ++.|+.|++.|.
T Consensus         3 ~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          3 KCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             cCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            455555555555555555542 32   134555555554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.42  E-value=4.1e-07  Score=55.93  Aligned_cols=52  Identities=25%  Similarity=0.380  Sum_probs=40.3

Q ss_pred             ccccCcccccccChhHHHHHHHHhcCCC-CcccccccccccCChHHHHHHhhhhcC
Q psy4574          35 EERCRSCGLLSGSITQTYIHYLECKNRG-KLYECSLCNESFENKKVLFRHLRGKHG   89 (343)
Q Consensus        35 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~-~~~~C~~C~~~~~~~~~l~~H~~~~~~   89 (343)
                      .|.||+|++. .+..+|..|+...|..+ +.+.||+|...+.  ..|..||...|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            5789999994 45678999988888875 4688999987655  378888887763

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=98.33  E-value=1.9e-07  Score=53.16  Aligned_cols=30  Identities=20%  Similarity=0.263  Sum_probs=20.0

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      +|+|+.||+.|..++.|..|++++|+..++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            466666666666666666666666666654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.32  E-value=1.1e-06  Score=53.97  Aligned_cols=37  Identities=30%  Similarity=0.756  Sum_probs=14.4

Q ss_pred             ccCCcCcccccchhHHHhHHhhccCCCCCCcccccccc
Q psy4574         130 YQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSR  167 (343)
Q Consensus       130 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~  167 (343)
                      |.||+|++ .-+...|..|....|......+.||+|..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            34444444 22233444444444433333334444443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.04  E-value=4.6e-06  Score=55.25  Aligned_cols=45  Identities=31%  Similarity=0.563  Sum_probs=31.2

Q ss_pred             ceeCCccCcccCCHHHHHHHhhh-cCCCCcccCCCCcccccCchhHHhHHhh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSC-HTGETSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      ||.|..|++.|....+|..|++. |.+   +.|+.||+.|.   .|..|+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            46777777777777777777764 442   46777777775   46677744

>KOG1146|consensus

Probab=97.97  E-value=2.5e-06  Score=82.70  Aligned_cols=121  Identities=17%  Similarity=0.251  Sum_probs=91.7

Q ss_pred             ccCcccccccChhHHHHHHHHhcCCCCcccccccccccCChHHHHHHhhhhcCCccc-----------------ccCCCC
Q psy4574          37 RCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIK-----------------LSRHKT   99 (343)
Q Consensus        37 ~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~-----------------~~~~~~   99 (343)
                      -|.-|...+.....+.-|+...+...+.+.|+.|++.|.....|..||+..|.+...                 ......
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~  517 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGK  517 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCC
Confidence            355566667666667777667778889999999999999999999999996664332                 111256


Q ss_pred             ccccccccccccChHHHHHHHHhcCCC------------------------------------------CCcccCCcCcc
Q psy4574         100 KCVCHYCNRTFDSKAKIQEHIISSHMH------------------------------------------EKLYQCDFCGS  137 (343)
Q Consensus       100 ~~~C~~C~~~f~~~~~l~~H~~~~H~~------------------------------------------~~~~~C~~C~~  137 (343)
                      +|.|..|+..+.+...|..|+...-..                                          +..+.|..|++
T Consensus       518 p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~y  597 (1406)
T KOG1146|consen  518 PYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSY  597 (1406)
T ss_pred             cccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcc
Confidence            789999999999999999998322100                                          23488999999


Q ss_pred             cccchhHHHhHHhhccCCCC
Q psy4574         138 QQRTKCRFYYHLRDKHLSKP  157 (343)
Q Consensus       138 ~~~~~~~l~~H~~~~~~~~~  157 (343)
                      ...-..+|+.||.......+
T Consensus       598 etniarnlrihmtss~~s~~  617 (1406)
T KOG1146|consen  598 ETNIARNLRIHMTASPSSSP  617 (1406)
T ss_pred             hhhhhhccccccccCCCCCC
Confidence            99999999999987664333

>KOG1146|consensus

Probab=97.93  E-value=1.5e-06  Score=84.08  Aligned_cols=220  Identities=21%  Similarity=0.290  Sum_probs=141.5

Q ss_pred             ccccccccccChHHHHHHHHhcCCCCCcccCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHH
Q psy4574         102 VCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAV  181 (343)
Q Consensus       102 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  181 (343)
                      .|..|...+.....+..|++..|...+.|+|+.|+..|+....|..||+..|.+...    ..|.       ..+.|.+.
T Consensus       438 e~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~----~~c~-------~gq~~~~~  506 (1406)
T KOG1146|consen  438 ELTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS----AYCK-------AGQNHPRL  506 (1406)
T ss_pred             cccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch----hHhH-------hccccccc
Confidence            456667777777777777777788788899999999999999999999987765432    2221       11122222


Q ss_pred             ------hCCCCcccccccccccCCchHHHhHHHhhccchhHHHH--------------------------------hhhc
Q psy4574         182 ------HKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKR--------------------------------TAIL  223 (343)
Q Consensus       182 ------h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~--------------------------------~~~~  223 (343)
                            -.+..+|.|..|...+....+|..|++..--....+..                                ....
T Consensus       507 arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pkt  586 (1406)
T KOG1146|consen  507 ARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKT  586 (1406)
T ss_pred             cccccccCCCCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCC
Confidence                  12346789999999999988999998764322111000                                0111


Q ss_pred             CCccccCccCccccchhHHHHHHhhhcCCCCc-ccccccccCCChHHHHHHHHhh-cC----------------------
Q psy4574         224 KREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTH-TG----------------------  279 (343)
Q Consensus       224 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h-~~----------------------  279 (343)
                      +-.|.|..|++...-..+|..|+...+...++ .+..++-.+..-..+..+.+.+ ++                      
T Consensus       587 kP~~~C~vc~yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~lp~tps~~~~s~~~l~qkl~l~~~~~e  666 (1406)
T KOG1146|consen  587 KPSWRCEVCSYETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRLPFTPSSPPSSDYELSQKLELPDLSLE  666 (1406)
T ss_pred             CCCcchhhhcchhhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCCCCCCCCCCccccchhhhhhcccccccc
Confidence            23589999999999999999997655544442 3333333333333333332222 00                      


Q ss_pred             -----------------------------------------------------------------CCceeCCccCccc-C
Q psy4574         280 -----------------------------------------------------------------LKPHCCEICGRSY-S  293 (343)
Q Consensus       280 -----------------------------------------------------------------~~~~~C~~C~~~f-~  293 (343)
                                                                                       .+.+.|-+|+.-- .
T Consensus       667 ~~a~~as~~~~~~~~~~~~~~~aPt~s~~g~~~~~~~~~~~~~~~~~~~aa~~l~~a~~~~~sps~k~~~civcd~~st~  746 (1406)
T KOG1146|consen  667 VAAKPASGLDGQLQLIRADPFLAPTGSEVGGGESLSPRDKLLRLTILPEAAMILGRAYMQDNSPSLKVFDCIVCDVFSTD  746 (1406)
T ss_pred             ccccccccccchhhhccCCcccCCCCCCCCCCCCCCcccccCcccccHHHHhhhhhcccCCCCHHHHHHHHhhhhhhhhh
Confidence                                                                             0348899998543 3


Q ss_pred             CHHHHHHHhhhcC------CCCcccCCCCcccccCchhHHhHHhh
Q psy4574         294 TAAYLKVHMSCHT------GETSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       294 ~~~~l~~H~~~h~------~~~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      +-..|+.|...-.      ....|.|.+|.+....+.++..|.++
T Consensus       747 ~l~~l~~h~~~~rs~ke~v~g~~~~c~l~~y~t~~kanfqlh~Kt  791 (1406)
T KOG1146|consen  747 RLDQLWFHNTRERSRKEQVPGDVPSCKLKPYATNTKANFQLHNKT  791 (1406)
T ss_pred             hHHHHhhcchhhhhhhhcccCCCCcceecccccccchhhhhhccc
Confidence            5566777753322      23469999999999999999988764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.92  E-value=5.3e-06  Score=41.09  Aligned_cols=22  Identities=23%  Similarity=0.631  Sum_probs=13.2

Q ss_pred             ccCCCCcccccCchhHHhHHhh
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      |.|++|++.|.+++.|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.89  E-value=7.1e-06  Score=41.07  Aligned_cols=24  Identities=38%  Similarity=0.872  Sum_probs=14.6

Q ss_pred             ccCCCCcccccCchhHHhHHhhcC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |+|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456667777767777777666655

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.82  E-value=1.1e-05  Score=39.90  Aligned_cols=23  Identities=48%  Similarity=0.872  Sum_probs=16.9

Q ss_pred             eeCCccCcccCCHHHHHHHhhhc
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      |.|++|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.75  E-value=1.5e-05  Score=41.16  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=14.1

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |.|..|++.|.+..+|..|++.|++
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            4555555555555555555555543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.70  E-value=2.8e-05  Score=54.93  Aligned_cols=23  Identities=22%  Similarity=0.608  Sum_probs=12.3

Q ss_pred             ceeCCccCcccCCHHHHHHHhhh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      .+.|.+|++.|.+...|..||+.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            35555555555555555555544

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.69  E-value=2.2e-05  Score=55.47  Aligned_cols=23  Identities=43%  Similarity=0.993  Sum_probs=0.0

Q ss_pred             ccccccccCChHHHHHHhhhhcC
Q psy4574          67 CSLCNESFENKKVLFRHLRGKHG   89 (343)
Q Consensus        67 C~~C~~~~~~~~~l~~H~~~~~~   89 (343)
                      |..|+..|.+...|..||...|+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~   24 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHG   24 (100)
T ss_dssp             -----------------------
T ss_pred             ccccccccccccccccccccccc
Confidence            55555555555555555555554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.58  E-value=5.3e-05  Score=37.76  Aligned_cols=24  Identities=38%  Similarity=0.839  Sum_probs=16.4

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcC
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      |.|++|++.|.+...|..|+..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            577888888888888888876653

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.57  E-value=5.7e-05  Score=38.97  Aligned_cols=26  Identities=31%  Similarity=0.769  Sum_probs=21.6

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||+|..|++.|....+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888899999888888888887753

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.45  E-value=5.1e-05  Score=37.87  Aligned_cols=24  Identities=33%  Similarity=0.647  Sum_probs=16.8

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |+|+.|++... +..|..|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57888888777 7788888877765

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.30  E-value=9.2e-05  Score=60.88  Aligned_cols=52  Identities=25%  Similarity=0.570  Sum_probs=36.9

Q ss_pred             CCceeCCc--cCcccCCHHHHHHHhhhcC-------------------CCCcccCCCCcccccCchhHHhHHh
Q psy4574         280 LKPHCCEI--CGRSYSTAAYLKVHMSCHT-------------------GETSHTCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       280 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  331 (343)
                      ++||+|++  |.+.|.....|..|+.--+                   ..+||+|++|++.+++...|..|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            36666666  6666666666666654211                   2478999999999999999988864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.04  E-value=0.00058  Score=39.84  Aligned_cols=31  Identities=26%  Similarity=0.403  Sum_probs=18.1

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      +.|..||+|+..+.+..+|.+|+...|+.+|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4566777777777777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.95  E-value=0.00021  Score=58.88  Aligned_cols=62  Identities=29%  Similarity=0.567  Sum_probs=47.5

Q ss_pred             CCcccccc--cccccCCchHHHhHHHhhccch--------hHHHHhhhcCCccccCccCccccchhHHHHHH
Q psy4574         185 GKNYQCYY--CRKTYCHKPNLTNHIQNVHLKS--------ELEKRTAILKREFICDVCGKSYVRKGALTEHH  246 (343)
Q Consensus       185 ~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~--------~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  246 (343)
                      ++||+|++  |.+.+.....|+.|+..-|-..        ..........+||+|+.|++.+.....|+.|.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            48899988  9999999999999987766322        11122345568899999999999988888884

>KOG2482|consensus

Probab=96.93  E-value=0.0016  Score=54.44  Aligned_cols=148  Identities=17%  Similarity=0.290  Sum_probs=84.1

Q ss_pred             ccccCcccccc-cChhHHHHHHHHhcCCC---------------------CcccccccccccCChHHHHHHhhhhcCCc-
Q psy4574          35 EERCRSCGLLS-GSITQTYIHYLECKNRG---------------------KLYECSLCNESFENKKVLFRHLRGKHGMK-   91 (343)
Q Consensus        35 ~~~C~~C~~~~-~~~~~l~~H~~~~h~~~---------------------~~~~C~~C~~~~~~~~~l~~H~~~~~~~~-   91 (343)
                      ..+|-+|+..+ .+.+.+..|+-..|.-.                     ..++|-.|.+.|..+..|..||+...... 
T Consensus       144 slqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hrri  223 (423)
T KOG2482|consen  144 SLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHRRI  223 (423)
T ss_pred             eeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCccc
Confidence            47899998876 56677778876677432                     24889999999999999999999654422 


Q ss_pred             -ccccCCCCcccccc--cccccc-ChHHHHHHHHhcCC------------C--CCcccCCcCcccccchhHHHhHHhhcc
Q psy4574          92 -IKLSRHKTKCVCHY--CNRTFD-SKAKIQEHIISSHM------------H--EKLYQCDFCGSQQRTKCRFYYHLRDKH  153 (343)
Q Consensus        92 -~~~~~~~~~~~C~~--C~~~f~-~~~~l~~H~~~~H~------------~--~~~~~C~~C~~~~~~~~~l~~H~~~~~  153 (343)
                       |.....+.-|.-..  =++... ....+.+-....+.            +  .....|-.|.....+...|..||...|
T Consensus       224 nPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vH  303 (423)
T KOG2482|consen  224 NPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVH  303 (423)
T ss_pred             CCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHH
Confidence             21111111111110  011100 00000000000110            0  111467777776666777777776665


Q ss_pred             CC-------------------------CCCCccccccccccCCHHHHHHHHHHh
Q psy4574         154 LS-------------------------KPANLSCEFCSRIFTKKELLRSHLAVH  182 (343)
Q Consensus       154 ~~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~h  182 (343)
                      .-                         ....-.|..|...|.....|..|+..+
T Consensus       304 e~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  304 EFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            20                         011147888888899999999988654

>KOG2231|consensus

Probab=96.90  E-value=0.003  Score=58.62  Aligned_cols=107  Identities=21%  Similarity=0.347  Sum_probs=65.8

Q ss_pred             cccCccccccc---------------ChhHHHHHHHHhcCCCCcccccccc---------cccCChHHHHHHhhhhcCCc
Q psy4574          36 ERCRSCGLLSG---------------SITQTYIHYLECKNRGKLYECSLCN---------ESFENKKVLFRHLRGKHGMK   91 (343)
Q Consensus        36 ~~C~~C~~~~~---------------~~~~l~~H~~~~h~~~~~~~C~~C~---------~~~~~~~~l~~H~~~~~~~~   91 (343)
                      +.|.+|+..|.               +...|..|+...|..   +.|.+|-         ...-+...|..|++.--...
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~  176 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDD  176 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCcc
Confidence            56777776663               667788887666644   3333331         12234566666665433311


Q ss_pred             ccccCCCCccccccccccccChHHHHHHHHhcCCCCCcccCCcC------cccccchhHHHhHHhhcc
Q psy4574          92 IKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFC------GSQQRTKCRFYYHLRDKH  153 (343)
Q Consensus        92 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C------~~~~~~~~~l~~H~~~~~  153 (343)
                      ..   ...---|..|...|.+...|..|++..|     |.|..|      +..|.....|..|.+..|
T Consensus       177 ~s---~rGhp~C~~C~~~fld~~el~rH~~~~h-----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  177 ES---CRGHPLCKFCHERFLDDDELYRHLRFDH-----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cc---ccCCccchhhhhhhccHHHHHHhhccce-----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            10   0112258888888888888888885544     566666      356677788888888887

>KOG2231|consensus

Probab=96.85  E-value=0.0037  Score=58.02  Aligned_cols=117  Identities=24%  Similarity=0.574  Sum_probs=74.3

Q ss_pred             cccCChHHHHHHhhhhcCCcccccCCCCccccccc---------cccccChHHHHHHHHhcCCCCCc----ccCCcCccc
Q psy4574          72 ESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYC---------NRTFDSKAKIQEHIISSHMHEKL----YQCDFCGSQ  138 (343)
Q Consensus        72 ~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C---------~~~f~~~~~l~~H~~~~H~~~~~----~~C~~C~~~  138 (343)
                      ..|.+-..|..||...|...          .|.+|         -....+..+|..|+...-.++..    -.|..|...
T Consensus       122 ~~~~s~~~Lk~H~~~~H~~~----------~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~  191 (669)
T KOG2231|consen  122 TEFKSVENLKNHMRDQHKLH----------LCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHER  191 (669)
T ss_pred             cchhHHHHHHHHHHHhhhhh----------ccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhh
Confidence            34447788888987777643          23333         22334567777777443332222    468888888


Q ss_pred             ccchhHHHhHHhhccCCCCCCcccccc------ccccCCHHHHHHHHHHhCCCCccccc--ccc-cccCCchHHHhHHH
Q psy4574         139 QRTKCRFYYHLRDKHLSKPANLSCEFC------SRIFTKKELLRSHLAVHKIGKNYQCY--YCR-KTYCHKPNLTNHIQ  208 (343)
Q Consensus       139 ~~~~~~l~~H~~~~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~-~~~~~~~~l~~H~~  208 (343)
                      |-...+|.+|++..|      |.|..|      +.-|.....|..|.+.++    |.|.  .|. ..|.....+..+++
T Consensus       192 fld~~el~rH~~~~h------~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  192 FLDDDELYRHLRFDH------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             hccHHHHHHhhccce------eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeehhHHHHHHH
Confidence            988999999988877      466666      355677788888887766    6676  565 33444434555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.78  E-value=0.0009  Score=39.08  Aligned_cols=34  Identities=29%  Similarity=0.553  Sum_probs=20.2

Q ss_pred             CCCCCcccCCcCcccccchhHHHhHHhhccCCCC
Q psy4574         124 HMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKP  157 (343)
Q Consensus       124 H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~  157 (343)
                      +..+.+-.||+|+..+.+..+|++|+...|+.++
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3455667788888888888888888877776543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.77  E-value=0.0012  Score=33.22  Aligned_cols=20  Identities=25%  Similarity=0.647  Sum_probs=9.1

Q ss_pred             cCCCCcccccCchhHHhHHh
Q psy4574         312 TCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~  331 (343)
                      .|+.|++.|.....|..|++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHH
Confidence            34444444444444444444

>smart00355 ZnF_C2H2 zinc finger

Probab=96.76  E-value=0.0012  Score=33.35  Aligned_cols=24  Identities=33%  Similarity=0.642  Sum_probs=21.8

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcC
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            679999999999999999998764

>KOG2482|consensus

Probab=96.74  E-value=0.0035  Score=52.40  Aligned_cols=149  Identities=19%  Similarity=0.356  Sum_probs=93.5

Q ss_pred             CCccccccccccc-CChHHHHHHhhhhcCCcccccCC--------------CCccccccccccccChHHHHHHHHhcCCC
Q psy4574          62 GKLYECSLCNESF-ENKKVLFRHLRGKHGMKIKLSRH--------------KTKCVCHYCNRTFDSKAKIQEHIISSHMH  126 (343)
Q Consensus        62 ~~~~~C~~C~~~~-~~~~~l~~H~~~~~~~~~~~~~~--------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  126 (343)
                      ....+|-.|...+ .+++.+..|+...|+...-++..              ...+.|-.|.+.|.++..|+.||+..-..
T Consensus       142 ~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrkK~Hr  221 (423)
T KOG2482|consen  142 IFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRKKRHR  221 (423)
T ss_pred             eeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHhccCc
Confidence            3457899997766 67788889999888754333332              34567999999999999999999554322


Q ss_pred             CCcccCCcCcccc--------cchhHHHhHH--hhc--c-------------CCCCCCccccccccccCCHHHHHHHHHH
Q psy4574         127 EKLYQCDFCGSQQ--------RTKCRFYYHL--RDK--H-------------LSKPANLSCEFCSRIFTKKELLRSHLAV  181 (343)
Q Consensus       127 ~~~~~C~~C~~~~--------~~~~~l~~H~--~~~--~-------------~~~~~~~~C~~C~~~f~~~~~l~~H~~~  181 (343)
                      .-.-+-..-++.|        ++......+.  .+.  .             +..+....|-.|.....+...|..||..
T Consensus       222 rinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~  301 (423)
T KOG2482|consen  222 RINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKI  301 (423)
T ss_pred             ccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHH
Confidence            1110111111111        1111111111  111  0             1112226899999988889999999976


Q ss_pred             hCC---------------------------CCcccccccccccCCchHHHhHHHhh
Q psy4574         182 HKI---------------------------GKNYQCYYCRKTYCHKPNLTNHIQNV  210 (343)
Q Consensus       182 h~~---------------------------~~~~~C~~C~~~~~~~~~l~~H~~~~  210 (343)
                      -+.                           .....|-.|...|..+..|..|+...
T Consensus       302 vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  302 VHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             HHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            432                           11257888999999999999998553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.64  E-value=0.0013  Score=32.99  Aligned_cols=20  Identities=35%  Similarity=0.914  Sum_probs=9.6

Q ss_pred             eCCccCcccCCHHHHHHHhh
Q psy4574         284 CCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       284 ~C~~C~~~f~~~~~l~~H~~  303 (343)
                      .|.+|++.|.+..+|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            44444444444444444443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.63  E-value=0.0013  Score=32.69  Aligned_cols=23  Identities=43%  Similarity=0.778  Sum_probs=10.3

Q ss_pred             ccccccccccCChHHHHHHhhhhc
Q psy4574          65 YECSLCNESFENKKVLFRHLRGKH   88 (343)
Q Consensus        65 ~~C~~C~~~~~~~~~l~~H~~~~~   88 (343)
                      |+|+.|++... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555554 445555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.60  E-value=0.0011  Score=33.24  Aligned_cols=23  Identities=22%  Similarity=0.644  Sum_probs=21.0

Q ss_pred             ccCCCCcccccCchhHHhHHhhc
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            57999999999999999999754

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.53  E-value=0.0039  Score=52.23  Aligned_cols=132  Identities=23%  Similarity=0.436  Sum_probs=87.0

Q ss_pred             ccccCc--ccccccChhHHHHHHHHhcCCCCccccccc---cccc------CChHHHHHHhhhhcCCcccccCCCCcccc
Q psy4574          35 EERCRS--CGLLSGSITQTYIHYLECKNRGKLYECSLC---NESF------ENKKVLFRHLRGKHGMKIKLSRHKTKCVC  103 (343)
Q Consensus        35 ~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C---~~~~------~~~~~l~~H~~~~~~~~~~~~~~~~~~~C  103 (343)
                      .|.||.  |..++.....|..|+...|..   +.|.+|   .+.|      .+...|+.|...-..+...    ..--.|
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~---~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GF----KGHP~C  223 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF---VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGF----KGHPLC  223 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc---EEhHhhhcCcccCccceeeeecccccccccCCccccCc----CCCchh
Confidence            477886  888888899999997777754   456655   2223      3344555554322211100    111259


Q ss_pred             ccccccccChHHHHHHHHhcCCCCCcccCCcCc-------ccccchhHHHhHHhhccCCCCCCccccc--cc----cccC
Q psy4574         104 HYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCG-------SQQRTKCRFYYHLRDKHLSKPANLSCEF--CS----RIFT  170 (343)
Q Consensus       104 ~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~-------~~~~~~~~l~~H~~~~~~~~~~~~~C~~--C~----~~f~  170 (343)
                      ..|+..|-+.+.|..|++..|-     +|-+|+       .-|.+...|..|++..|      |.|..  |.    .+|+
T Consensus       224 ~FC~~~FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h------y~ct~qtc~~~k~~vf~  292 (493)
T COG5236         224 IFCKIYFYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH------YCCTFQTCRVGKCYVFP  292 (493)
T ss_pred             hhccceecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCc------eEEEEEEEecCcEEEec
Confidence            9999999999999999977662     566665       35788888888887766      45543  22    5688


Q ss_pred             CHHHHHHHHHHhCC
Q psy4574         171 KKELLRSHLAVHKI  184 (343)
Q Consensus       171 ~~~~l~~H~~~h~~  184 (343)
                      ....|..|+...++
T Consensus       293 ~~~el~~h~~~~h~  306 (493)
T COG5236         293 YHTELLEHLTRFHK  306 (493)
T ss_pred             cHHHHHHHHHHHhh
Confidence            88888888765544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.50  E-value=0.0024  Score=53.46  Aligned_cols=129  Identities=20%  Similarity=0.447  Sum_probs=77.4

Q ss_pred             ccccc--cccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccC---------ccccchhHHHHHHhhhcCCC---
Q psy4574         188 YQCYY--CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCG---------KSYVRKGALTEHHQREHQGK---  253 (343)
Q Consensus       188 ~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~---------~~f~~~~~l~~H~~~~h~~~---  253 (343)
                      |.||.  |...+.....|..|....|..             +.|..|-         -...+...|..|......+.   
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~-------------~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFK  218 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF-------------VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFK  218 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc-------------EEhHhhhcCcccCccceeeeecccccccccCCccccCcC
Confidence            55654  555555566677777665532             3444442         23344566666642222222   


Q ss_pred             -CcccccccccCCChHHHHHHHHhhcCCCceeCCccCc-------ccCCHHHHHHHhhhcCCCCcccCCC--Cc----cc
Q psy4574         254 -KPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGR-------SYSTAAYLKVHMSCHTGETSHTCHL--CP----QK  319 (343)
Q Consensus       254 -~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~  319 (343)
                       .|.|..|...|-+...|..|++..+.    +|-||++       -|.+..+|.+|...-+    |.|..  |.    +.
T Consensus       219 GHP~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~v  290 (493)
T COG5236         219 GHPLCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYV  290 (493)
T ss_pred             CCchhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEE
Confidence             34788888888888888888876553    4666653       4667777888864322    23321  22    56


Q ss_pred             ccCchhHHhHHhhcCCCC
Q psy4574         320 FRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       320 f~~~~~l~~H~~~~h~~~  337 (343)
                      |.....|..|+..-|+..
T Consensus       291 f~~~~el~~h~~~~h~~~  308 (493)
T COG5236         291 FPYHTELLEHLTRFHKVN  308 (493)
T ss_pred             eccHHHHHHHHHHHhhcc
Confidence            888888888888777653

>PRK04860 hypothetical protein; Provisional

Probab=96.42  E-value=0.0017  Score=49.56  Aligned_cols=39  Identities=21%  Similarity=0.485  Sum_probs=29.8

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCch
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRS  324 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  324 (343)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            58887 876   5667788888888888888888888776543

>KOG2785|consensus

Probab=96.42  E-value=0.015  Score=49.70  Aligned_cols=49  Identities=24%  Similarity=0.462  Sum_probs=37.7

Q ss_pred             ccccccccCCChHHHHHHHHhhcCC-----------------------CceeCCccC---cccCCHHHHHHHhhh
Q psy4574         256 VCTICGKMLIDKRSLANHMNTHTGL-----------------------KPHCCEICG---RSYSTAAYLKVHMSC  304 (343)
Q Consensus       256 ~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  304 (343)
                      .|..|+..+++....+.||..++|-                       .-|.|-.|.   +.|.+..+.+.||..
T Consensus       168 ~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  168 DCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            6888999998888888898887764                       226677777   777777788888754

>KOG4173|consensus

Probab=96.32  E-value=0.0019  Score=49.84  Aligned_cols=80  Identities=25%  Similarity=0.557  Sum_probs=64.7

Q ss_pred             cccccc--cccccCChHHHHHHhhhhcCCcccccCCCCccccccccccccChHHHHHHHHhcC---------CCCCcccC
Q psy4574          64 LYECSL--CNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIISSH---------MHEKLYQC  132 (343)
Q Consensus        64 ~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H---------~~~~~~~C  132 (343)
                      .|.|++  |-..|.+.+....|..+-|+.           .|..|.+.|++...|..|+...|         .|...|.|
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~-----------sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN-----------SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc-----------hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            467865  888999999999998877775           59999999999999999997777         24667888


Q ss_pred             --CcCcccccchhHHHhHHhhccC
Q psy4574         133 --DFCGSQQRTKCRFYYHLRDKHL  154 (343)
Q Consensus       133 --~~C~~~~~~~~~l~~H~~~~~~  154 (343)
                        ..|+..|.+...-..|+...|.
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHHhcc
Confidence              4588888888888888877764

>KOG2785|consensus

Probab=96.19  E-value=0.022  Score=48.78  Aligned_cols=59  Identities=19%  Similarity=0.304  Sum_probs=48.6

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCC-----------------------CcccCCCCc---ccccCchhHHhHHh-hc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGE-----------------------TSHTCHLCP---QKFRQRSSYTLHYK-TH  333 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~-~~  333 (343)
                      -|-.|-.|++.+.+-..-..||..++|-                       .-+.|=.|.   +.|.+..+.+.||. .-
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K~  244 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDKG  244 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhcc
Confidence            4577999999999999999999888872                       236788888   99999999999997 55


Q ss_pred             CCCCCC
Q psy4574         334 HPGVIP  339 (343)
Q Consensus       334 h~~~~~  339 (343)
                      |...++
T Consensus       245 HCkl~y  250 (390)
T KOG2785|consen  245 HCKLPY  250 (390)
T ss_pred             CcccCC
Confidence            666665

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.13  E-value=0.0025  Score=32.68  Aligned_cols=22  Identities=23%  Similarity=0.552  Sum_probs=12.8

Q ss_pred             ccCCCCcccccCchhHHhHHhh
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4466666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893|consensus

Probab=96.00  E-value=0.0018  Score=51.18  Aligned_cols=51  Identities=27%  Similarity=0.574  Sum_probs=42.2

Q ss_pred             CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHH-hhhcCC
Q psy4574         253 KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH-MSCHTG  307 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  307 (343)
                      .+++|.+|++.|.....|.+|++.-    -|+|.||.+..-+-..|..| |++|..
T Consensus         9 ~kpwcwycnrefddekiliqhqkak----hfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen    9 DKPWCWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             CCceeeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhhhh
Confidence            4568999999999999999998874    49999999887777788888 466653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.75  E-value=0.0047  Score=31.62  Aligned_cols=22  Identities=32%  Similarity=0.730  Sum_probs=17.9

Q ss_pred             eeCCccCcccCCHHHHHHHhhh
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      |.|.+|++.|.+..+|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888764

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.08  E-value=0.016  Score=28.94  Aligned_cols=19  Identities=32%  Similarity=0.690  Sum_probs=10.8

Q ss_pred             cCCCCcccccCchhHHhHHh
Q psy4574         312 TCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~  331 (343)
                      +|+.||+.| ..+.|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4555555554

>KOG4173|consensus

Probab=94.87  E-value=0.012  Score=45.60  Aligned_cols=89  Identities=20%  Similarity=0.413  Sum_probs=71.4

Q ss_pred             ccccccCc--ccccccChhHHHHHHHHhcCCCCcccccccccccCChHHHHHHhhhhcCCcccc--cCCCCccccc--cc
Q psy4574          33 WDEERCRS--CGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKL--SRHKTKCVCH--YC  106 (343)
Q Consensus        33 ~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~--~~~~~~~~C~--~C  106 (343)
                      ...+.|+.  |...|.+......|+-..|..    .|..|.+.|.+...|..|+..-|..-...  .+....|.|-  .|
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgC  152 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGC  152 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhh
Confidence            34577987  899999999999998777743    79999999999999999998777633222  2335667885  49


Q ss_pred             cccccChHHHHHHHHhcCC
Q psy4574         107 NRTFDSKAKIQEHIISSHM  125 (343)
Q Consensus       107 ~~~f~~~~~l~~H~~~~H~  125 (343)
                      +..|.+..+-..|+...|.
T Consensus       153 t~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  153 TEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhhhHHHHhcc
Confidence            9999999999999999985

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.40  E-value=0.036  Score=27.68  Aligned_cols=20  Identities=35%  Similarity=0.737  Sum_probs=14.7

Q ss_pred             eeCCccCcccCCHHHHHHHhh
Q psy4574         283 HCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      .+|+.||+.| ..+.|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688888888 6667777764

>PRK04860 hypothetical protein; Provisional

Probab=94.05  E-value=0.033  Score=42.59  Aligned_cols=38  Identities=24%  Similarity=0.488  Sum_probs=27.5

Q ss_pred             CCccccccccccCCHHHHHHHHHHhCCCCcccccccccccCC
Q psy4574         158 ANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCH  199 (343)
Q Consensus       158 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~  199 (343)
                      +.|.|. |+.   ....+++|.+++.++++|.|..|+..|..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            347787 776   56667778888888888888888776644

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.50  E-value=0.047  Score=29.41  Aligned_cols=24  Identities=25%  Similarity=0.773  Sum_probs=14.6

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcc
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQ  318 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  318 (343)
                      |.|.+||..+....            .+..||+||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56777776654322            4566777765

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.18  E-value=0.089  Score=28.65  Aligned_cols=22  Identities=14%  Similarity=0.616  Sum_probs=15.5

Q ss_pred             ceeCCccCcccCCHHHHHHHhh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      +|.|.+|+..|.+..++..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.93  E-value=0.037  Score=32.93  Aligned_cols=28  Identities=36%  Similarity=0.656  Sum_probs=13.2

Q ss_pred             CCCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         307 GETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       307 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |+..++||.||..|....++.+|+...|
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            3334445555555544444444444443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=92.51  E-value=0.07  Score=31.81  Aligned_cols=30  Identities=20%  Similarity=0.274  Sum_probs=16.3

Q ss_pred             cccccccccCcccccccChhHHHHHHHHhc
Q psy4574          30 SDVWDEERCRSCGLLSGSITQTYIHYLECK   59 (343)
Q Consensus        30 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h   59 (343)
                      .+|+..++||.|++.|........|+-+.|
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            344555556666665555555555544444

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.47  E-value=0.082  Score=28.79  Aligned_cols=24  Identities=29%  Similarity=0.512  Sum_probs=21.2

Q ss_pred             CcccCCCCcccccCchhHHhHHhh
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      .+|.|.+|+..|.....+..|+..
T Consensus         2 ~~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        2 GGFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             cCeEccccCCccCCHHHHHHHHCh
Confidence            368899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.42  E-value=0.2  Score=35.41  Aligned_cols=83  Identities=17%  Similarity=0.284  Sum_probs=40.1

Q ss_pred             cccccccccccCChHHHHHHhhhhcCCcccccC----CCCccccccccccccChHHHHHHHHhcCCCCCcccCCcCcccc
Q psy4574          64 LYECSLCNESFENKKVLFRHLRGKHGMKIKLSR----HKTKCVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQ  139 (343)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~----~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~  139 (343)
                      |..|++|+.+.-+..+|.+-.-.--+..++...    ....-.|.-|+..|........   ..=.....|.|+.|...|
T Consensus        15 P~~CpiCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~C~~~f~~~~~~~~---~~~~~~~~y~C~~C~~~F   91 (112)
T TIGR00622        15 PVECPICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFGCQGPFPKPPVSPF---DELKDSHRYVCAVCKNVF   91 (112)
T ss_pred             CCcCCcCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccCcCCCCCCcccccc---cccccccceeCCCCCCcc
Confidence            567888888777776665432111111111110    0111247777777765421110   001123456666666666


Q ss_pred             cchhHHHhHH
Q psy4574         140 RTKCRFYYHL  149 (343)
Q Consensus       140 ~~~~~l~~H~  149 (343)
                      -..-++..|-
T Consensus        92 C~dCD~fiHe  101 (112)
T TIGR00622        92 CVDCDVFVHE  101 (112)
T ss_pred             ccccchhhhh
Confidence            6666665554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.10  E-value=0.23  Score=35.48  Aligned_cols=89  Identities=18%  Similarity=0.138  Sum_probs=48.9

Q ss_pred             cccccCcccccccChhHHHHHHHHhcCCCCcccccccccccCChHHHHH---Hhhhh-cCC--cccccCCCCcccc----
Q psy4574          34 DEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFR---HLRGK-HGM--KIKLSRHKTKCVC----  103 (343)
Q Consensus        34 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~---H~~~~-~~~--~~~~~~~~~~~~C----  103 (343)
                      +-+.|..|+..... ..+..|+...|.......-..=...+.....|..   .+..- .+.  -+.+.. ...|.|    
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~-~~G~~C~~~~   87 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPV-YDGYRCQCDP   87 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCC-CCCeeeecCC
Confidence            45679999998876 7788998777754322110000000011110100   00000 000  011111 467899    


Q ss_pred             ccccccccChHHHHHHHHhcC
Q psy4574         104 HYCNRTFDSKAKIQEHIISSH  124 (343)
Q Consensus       104 ~~C~~~f~~~~~l~~H~~~~H  124 (343)
                      ..|++.+.+...|..|++..|
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhc
Confidence            999999999999999997766

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.73  E-value=0.3  Score=34.93  Aligned_cols=24  Identities=25%  Similarity=0.517  Sum_probs=14.8

Q ss_pred             ccc----cccccccCCHHHHHHHHHHhC
Q psy4574         160 LSC----EFCSRIFTKKELLRSHLAVHK  183 (343)
Q Consensus       160 ~~C----~~C~~~f~~~~~l~~H~~~h~  183 (343)
                      |.|    +.|+..+.+...++.|++.++
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            566    666666666666666665554

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=91.12  E-value=0.063  Score=42.76  Aligned_cols=46  Identities=28%  Similarity=0.661  Sum_probs=26.1

Q ss_pred             cccccccccChHHHHHHHHhcCCCCCcccCCcCcccccchhHHHhHHhhcc
Q psy4574         103 CHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKH  153 (343)
Q Consensus       103 C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~  153 (343)
                      |=.|+..|.+..-|..|+...|     |+|.+|.+.+-+--.|..|....|
T Consensus        13 cwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeehhhhh
Confidence            5556666666666666654333     566666665555555555554444

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=90.70  E-value=0.14  Score=25.76  Aligned_cols=10  Identities=30%  Similarity=0.746  Sum_probs=6.8

Q ss_pred             cCCCCccccc
Q psy4574         312 TCHLCPQKFR  321 (343)
Q Consensus       312 ~C~~C~~~f~  321 (343)
                      .|+.||+.|.
T Consensus        16 ~Cp~CG~~F~   25 (26)
T PF10571_consen   16 FCPHCGYDFE   25 (26)
T ss_pred             cCCCCCCCCc
Confidence            4777777764

Several members are annotated as putative helicases.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.02  E-value=0.084  Score=48.07  Aligned_cols=154  Identities=15%  Similarity=0.221  Sum_probs=97.0

Q ss_pred             cccccCcccccccChhHHHHHHHH-hcCCC--Cccccc--ccccccCChHHHHHHhhhhcCCcccccCCCCcccccc--c
Q psy4574          34 DEERCRSCGLLSGSITQTYIHYLE-CKNRG--KLYECS--LCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHY--C  106 (343)
Q Consensus        34 ~~~~C~~C~~~~~~~~~l~~H~~~-~h~~~--~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~--C  106 (343)
                      .++.|..|...|.....|..|... .|..+  +++.|+  .|+..|.....+..|...+......        .+..  +
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  359 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPA--------KEKLLNS  359 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcc--------ccccccC
Confidence            367888899999888888888443 78888  888998  7999999988888888888876655        2322  2


Q ss_pred             cccccChHHH----HHHHHhcCCCCCcccC--CcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHH
Q psy4574         107 NRTFDSKAKI----QEHIISSHMHEKLYQC--DFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLA  180 (343)
Q Consensus       107 ~~~f~~~~~l----~~H~~~~H~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  180 (343)
                      ...+......    .......-.....+.+  ..|...+.....+..|...+.......+.+..|...+.....+..|++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  439 (467)
T COG5048         360 SSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKK  439 (467)
T ss_pred             ccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccc
Confidence            2222211110    1111011111222222  224455555666666666666666566778888888888888888888


Q ss_pred             HhCCCCccccccccc
Q psy4574         181 VHKIGKNYQCYYCRK  195 (343)
Q Consensus       181 ~h~~~~~~~C~~C~~  195 (343)
                      .+....++.|..+..
T Consensus       440 ~~~~~~~~~~~~~~~  454 (467)
T COG5048         440 IHTNHAPLLCSILKS  454 (467)
T ss_pred             ccccCCceeeccccc
Confidence            877666665555443

>PF12907 zf-met2: Zinc-binding

Probab=89.83  E-value=0.18  Score=28.38  Aligned_cols=32  Identities=19%  Similarity=0.234  Sum_probs=21.0

Q ss_pred             cccCcccccc---cChhHHHHHHHHhcCCCCcccc
Q psy4574          36 ERCRSCGLLS---GSITQTYIHYLECKNRGKLYEC   67 (343)
Q Consensus        36 ~~C~~C~~~~---~~~~~l~~H~~~~h~~~~~~~C   67 (343)
                      ++|.+|..+|   .+...|..|+...|++..+-.|
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~~~~C   36 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNTFEEC   36 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCCHHHc
Confidence            5677787544   5556778887777777554444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.28  E-value=0.077  Score=48.32  Aligned_cols=59  Identities=25%  Similarity=0.425  Sum_probs=48.4

Q ss_pred             cccccccCcccccccChhHHHHHHHHhcCCCCcccccc--cccccCChHHHHHHhhhhcCCc
Q psy4574          32 VWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSL--CNESFENKKVLFRHLRGKHGMK   91 (343)
Q Consensus        32 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~   91 (343)
                      ....+.|+.|...|........| ...+..++++.|..  |...+.....+..|...++...
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (467)
T COG5048          30 APRPDSCPNCTDSFSRLEHLTRH-IRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNP   90 (467)
T ss_pred             CCchhhcccccccccccchhhhh-cccccccCCccccccccccccCCcchhhhhcccccccc
Confidence            34668899999999999999999 88999999999965  6777888888888887766633

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=88.45  E-value=0.29  Score=26.52  Aligned_cols=26  Identities=19%  Similarity=0.599  Sum_probs=15.7

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      .|.|.+||..+....            .|-.||+||..
T Consensus         2 ~~~C~~CG~i~~g~~------------~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGEE------------APEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECCc------------CCCcCcCCCCc
Confidence            367777776654321            34567777753

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.81  E-value=0.89  Score=32.22  Aligned_cols=54  Identities=19%  Similarity=0.364  Sum_probs=32.5

Q ss_pred             ccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCc
Q psy4574         256 VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCP  317 (343)
Q Consensus       256 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  317 (343)
                      .|..|...|.......  ...-.....|+|+.|...|-..=.+.+|...|.      |+-|.
T Consensus        57 ~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~------CPGC~  110 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLHC------CPGCI  110 (112)
T ss_pred             cccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhhhccC------CcCCC
Confidence            4777777776543111  000122346888888888877777777866554      66664

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12907 zf-met2: Zinc-binding

Probab=86.47  E-value=0.39  Score=26.99  Aligned_cols=28  Identities=18%  Similarity=0.425  Sum_probs=18.3

Q ss_pred             ccCCCCc---ccccCchhHHhHHhhcCCCCC
Q psy4574         311 HTCHLCP---QKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       311 ~~C~~C~---~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      ++|.+|.   ........|..|....|++.+
T Consensus         2 i~C~iC~qtF~~t~~~~~L~eH~enKHpK~~   32 (40)
T PF12907_consen    2 IICKICRQTFMQTTNEPQLKEHAENKHPKNT   32 (40)
T ss_pred             cCcHHhhHHHHhcCCHHHHHHHHHccCCCCC
Confidence            4677777   344455667777777777753

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=84.39  E-value=0.76  Score=25.42  Aligned_cols=7  Identities=29%  Similarity=0.914  Sum_probs=2.8

Q ss_pred             cCCCCcc
Q psy4574         312 TCHLCPQ  318 (343)
Q Consensus       312 ~C~~C~~  318 (343)
                      +|+.|+.
T Consensus        27 rC~~C~~   33 (37)
T PF13719_consen   27 RCPKCGH   33 (37)
T ss_pred             ECCCCCc
Confidence            3444433

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.29  E-value=0.59  Score=27.10  Aligned_cols=27  Identities=22%  Similarity=0.509  Sum_probs=14.2

Q ss_pred             CCcccCCCCcccccC----chhHHhHHhhcC
Q psy4574         308 ETSHTCHLCPQKFRQ----RSSYTLHYKTHH  334 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~----~~~l~~H~~~~h  334 (343)
                      .....|.+|++.+..    .++|..|++..|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            344566666665543    467777775554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF06524 NOA36: NOA36 protein; InterPro: IPR010531 This family consists of several NOA36 proteins which contain 29 highly conserved cysteine residues

Probab=83.87  E-value=0.7  Score=37.63  Aligned_cols=19  Identities=21%  Similarity=0.431  Sum_probs=11.0

Q ss_pred             CCccccCccCccccchhHH
Q psy4574         224 KREFICDVCGKSYVRKGAL  242 (343)
Q Consensus       224 ~~~~~C~~C~~~f~~~~~l  242 (343)
                      .+++.||.|+.......+|
T Consensus       207 ~k~~PCPKCg~et~eTkdL  225 (314)
T PF06524_consen  207 GKPIPCPKCGYETQETKDL  225 (314)
T ss_pred             CCCCCCCCCCCcccccccc
Confidence            3566677776655554444

The function of this protein is unknown.; GO: 0008270 zinc ion binding, 0005634 nucleus

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=83.74  E-value=0.82  Score=26.45  Aligned_cols=26  Identities=23%  Similarity=0.566  Sum_probs=17.4

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      |.|..||..|...           ...+.+|+.||..
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCce
Confidence            7788888777543           2245678888864

present in RNA polymerase I, II and III

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=83.58  E-value=0.86  Score=27.87  Aligned_cols=8  Identities=25%  Similarity=0.675  Sum_probs=4.1

Q ss_pred             cccccccc
Q psy4574         160 LSCEFCSR  167 (343)
Q Consensus       160 ~~C~~C~~  167 (343)
                      |.|+.||+
T Consensus        51 Y~Cp~CGF   58 (61)
T COG2888          51 YRCPKCGF   58 (61)
T ss_pred             eECCCcCc
Confidence            45555554

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=83.45  E-value=0.7  Score=32.77  Aligned_cols=15  Identities=20%  Similarity=0.764  Sum_probs=9.2

Q ss_pred             CccccCccCccccch
Q psy4574         225 REFICDVCGKSYVRK  239 (343)
Q Consensus       225 ~~~~C~~C~~~f~~~  239 (343)
                      .|..||.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            455677776666544

The function of members of this family is unknown.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=83.16  E-value=0.86  Score=25.05  Aligned_cols=12  Identities=33%  Similarity=1.018  Sum_probs=5.4

Q ss_pred             CccccCccCccc
Q psy4574         225 REFICDVCGKSY  236 (343)
Q Consensus       225 ~~~~C~~C~~~f  236 (343)
                      ...+|+.|+..|
T Consensus        24 ~~v~C~~C~~~f   35 (36)
T PF13717_consen   24 RKVRCSKCGHVF   35 (36)
T ss_pred             cEEECCCCCCEe
Confidence            334455444443

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=83.08  E-value=0.69  Score=25.69  Aligned_cols=12  Identities=25%  Similarity=0.523  Sum_probs=5.9

Q ss_pred             ccCccCccccch
Q psy4574         228 ICDVCGKSYVRK  239 (343)
Q Consensus       228 ~C~~C~~~f~~~  239 (343)
                      .|+.|+..|.-.
T Consensus         4 ~CP~C~~~~~v~   15 (38)
T TIGR02098         4 QCPNCKTSFRVV   15 (38)
T ss_pred             ECCCCCCEEEeC
Confidence            455555554433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>COG1996 RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription]

Probab=82.64  E-value=0.77  Score=27.08  Aligned_cols=28  Identities=21%  Similarity=0.525  Sum_probs=18.6

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      .|.|..||+.|....          .....+|+.||..
T Consensus         6 ~Y~C~~Cg~~~~~~~----------~~~~irCp~Cg~r   33 (49)
T COG1996           6 EYKCARCGREVELDQ----------ETRGIRCPYCGSR   33 (49)
T ss_pred             EEEhhhcCCeeehhh----------ccCceeCCCCCcE
Confidence            488888988883211          1345679988865

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=81.16  E-value=1  Score=31.99  Aligned_cols=31  Identities=23%  Similarity=0.529  Sum_probs=24.0

Q ss_pred             ccccCcccccccChhHHHHHHHHhcCCCCcccccccccccCCh
Q psy4574          35 EERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENK   77 (343)
Q Consensus        35 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~   77 (343)
                      ...|+.||+.|-...            ..|..||.||..|.-.
T Consensus         9 KR~Cp~CG~kFYDLn------------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDLN------------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccCC------------CCCccCCCCCCccCcc
Confidence            467999999987643            3578899999988755

The function of members of this family is unknown.

>KOG2807|consensus

Probab=80.46  E-value=2.3  Score=36.02  Aligned_cols=81  Identities=20%  Similarity=0.438  Sum_probs=48.3

Q ss_pred             cccccccccccCChHHHHHHhhhhcCCcccccCCCCc----cccccccccccChHHHHHHHHhcCCCCCcccCCcCcccc
Q psy4574          64 LYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTK----CVCHYCNRTFDSKAKIQEHIISSHMHEKLYQCDFCGSQQ  139 (343)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~----~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~  139 (343)
                      |..|++|+.+.-+...|.+-...--+.+++...+...    -.|..|+              ..-.....|+|..|...|
T Consensus       290 P~eCpiC~ltLVss~hLARSyhhL~PL~~F~Eip~~~~~~~~~Cf~C~--------------~~~~~~~~y~C~~Ck~~F  355 (378)
T KOG2807|consen  290 PIECPICSLTLVSSPHLARSYHHLFPLKPFVEIPETEYNGSRFCFACQ--------------GELLSSGRYRCESCKNVF  355 (378)
T ss_pred             CccCCccceeEecchHHHHHHHhhcCCcchhhccccccCCCcceeeec--------------cccCCCCcEEchhcccee
Confidence            6778888888877777765433222333332222111    1266661              222345578999999999


Q ss_pred             cchhHHHhHHhhccCCCCCCccccccc
Q psy4574         140 RTKCRFYYHLRDKHLSKPANLSCEFCS  166 (343)
Q Consensus       140 ~~~~~l~~H~~~~~~~~~~~~~C~~C~  166 (343)
                      -.--+...|-..|        .|+.|.
T Consensus       356 CldCDv~iHesLh--------~CpgCe  374 (378)
T KOG2807|consen  356 CLDCDVFIHESLH--------NCPGCE  374 (378)
T ss_pred             eccchHHHHhhhh--------cCCCcC
Confidence            8888888885432        566665

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.43  E-value=2  Score=32.99  Aligned_cols=19  Identities=5%  Similarity=0.069  Sum_probs=10.8

Q ss_pred             CCcccCCcCcccccchhHH
Q psy4574         127 EKLYQCDFCGSQQRTKCRF  145 (343)
Q Consensus       127 ~~~~~C~~C~~~~~~~~~l  145 (343)
                      ...|.||.|+..|+....+
T Consensus       107 ~~~Y~Cp~c~~r~tf~eA~  125 (158)
T TIGR00373       107 NMFFICPNMCVRFTFNEAM  125 (158)
T ss_pred             CCeEECCCCCcEeeHHHHH
Confidence            4456666666665555554

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=80.22  E-value=1.1  Score=33.95  Aligned_cols=36  Identities=14%  Similarity=0.372  Sum_probs=17.5

Q ss_pred             cccccCcccccccChhHHHHHHHHhcCCCCccccccccccc
Q psy4574          34 DEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESF   74 (343)
Q Consensus        34 ~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~   74 (343)
                      ..|.||.|+..|....++..    .+. ...|.||.||...
T Consensus        98 ~~Y~Cp~C~~~y~~~ea~~~----~d~-~~~f~Cp~Cg~~l  133 (147)
T smart00531       98 AYYKCPNCQSKYTFLEANQL----LDM-DGTFTCPRCGEEL  133 (147)
T ss_pred             cEEECcCCCCEeeHHHHHHh----cCC-CCcEECCCCCCEE
Confidence            45666666666664433321    011 2236666665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	343
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-21
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-10
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-09
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-07
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		1e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		5e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		7e-05
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		9e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 161 SCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRT 220
           +C  C + F++ + L  H   H   K Y+C  C K++  K +LT H           +RT
Sbjct: 23  ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-----------QRT 71
Query: 221 AILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTG 279
              ++ + C  CGKS+ ++  L  H QR H G+KP  C  CGK       L  H  THTG
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            KP+ C  CG+S+S    L  H   HTGE  + C  C + F +R +  +H +TH
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 223 LKREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLK 281
           +++ + C  CGKS+ +   L + HQR H G+KP  C  CGK       L  H  THTG K
Sbjct: 1   MEKPYKCPECGKSFSQSSNL-QKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 282 PHCCEICGRSYSTAAYLKVHMSCH 305
           P+ C  CG+S+S + +L  H   H
Sbjct: 60  PYKCPECGKSFSRSDHLSRHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           C  CGK      +L  H  THTG KP+ C  CG+S+S ++ L+ H   HTGE  + C  C
Sbjct: 7   CPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPEC 66
Query: 317 PQKFRQRSSYTLHYKTH 333
            + F +    + H +TH
Sbjct: 67  GKSFSRSDHLSRHQRTH 83

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 226 EFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
            F C +CGKS+ R   L+ H       +   C  CGK    K  +  H   HTG KPH C
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 286 EICGRSYSTAAYLKVHMSCHTG 307
           ++CG+++S ++ L  H   HTG
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 221 AILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTI--CGKMLIDKRSLANHMN 275
           A  KR F+C    C K Y +   L + H R+H G+KP  C    C +       L  H  
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHL-QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR 59
Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH 333
            HTG+KP  C+ C R +S + +LK H   HTGE   +C    C +KF +      H+  H
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +   D  +L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +    K +L  H+  HTG KP  C IC R++S  A L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTHHPGV 337
           F      TLH +T H  +
Sbjct: 72  F-----ATLHTRTRHTKI 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 223 LKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTG 279
           ++R + C V  C + + + G+LT H  R H G+KP  C IC +       L  H+ THTG
Sbjct: 1   MERPYACPVESCDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCH 305
            KP  C+ICGR ++ +   K H   H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +      SL  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           C +CGK    K  L  HM  HTG+KP+ C+ C  + + ++ L  H+  H+ E    C +C
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 317 PQKFRQRSSYTLHYKTH 333
           P   R  S  T+H ++H
Sbjct: 71  PYASRNSSQLTVHLRSH 87

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 223 LKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTG 279
           ++R + C V  C + + R   LT H  R H G+KP  C IC +       L  H+ THTG
Sbjct: 1   MERPYACPVESCDRRFSRSAELTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCH 305
            KP  C+ICGR ++ +   K H   H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +       L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 223 LKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTG 279
           ++R + C V  C + + R   LT H  R H G+KP  C IC +       L  H+ THTG
Sbjct: 1   MERPYACPVESCDRRFSRSADLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCH 305
            KP  C+ICGR ++ +   K H   H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +       L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 223 LKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTG 279
           ++R + C V  C + + R   LT H  R H G+KP  C IC +       L  H+ THTG
Sbjct: 1   MERPYACPVESCDRRFSRSDELTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCH 305
            KP  C+ICGR ++ +   K H   H
Sbjct: 60  EKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +       L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           CGK    K     HM+ H GL+P+ C +CG+ +    +L  HM  HTG   + C++C ++
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 320 FRQRSSYTLH 329
           F  R S+  H
Sbjct: 75  FMWRDSFHRH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 224 KREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGL 280
           +R + C V  C + + R   LT H  R H G+KP  C IC +       L  H+ THTG 
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 59
Query: 281 KPHCCEICGRSYSTAAYLKVHMSCH 305
           KP  C+ICGR ++ +   K H   H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +       L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 224 KREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGL 280
           +R + C V  C + + R   LT H  R H G+KP  C IC +       L  H+ THTG 
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 281 KPHCCEICGRSYSTAAYLKVHMSCH 305
           KP  C+ICGR ++ +   K H   H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +       L  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 238 RKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCC--EICGRSYSTA 295
           R  +    H   H  +  VC  CGK  ++   L  H   HTG KP  C  E CG+ +S  
Sbjct: 18  RDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLD 77
Query: 296 AYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH 333
             L+ H+  HTG+  + C    C +KF Q ++   H  TH
Sbjct: 78  FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 223 LKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTG 279
           ++R + C V  C + + +K  L + H R H G+KP  C IC +       L  H+ THTG
Sbjct: 1   MERPYACPVESCDRRFSQKTNL-DTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTG 59
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCH 305
            KP  C+ICGR ++T      H   H
Sbjct: 60  EKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +    K +L  H+  HTG KP  C IC R++S    L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 320 FRQRSSYTLHYKTH 333
           F    +   H K H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 224 KREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKP 282
           K+EFIC  CG+ + +   L   H+R H  ++P  C IC K    +  L +H   H+  KP
Sbjct: 15  KKEFICKFCGRHFTKSYNLLI-HERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 283 HCCEICGRSYSTAAYLKVHMSCHTGETSHT 312
             C+ CG+ +  +  L VH + H   +S T
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANH-----MNTHTGLKP 282
           C  C K ++ K  L  H+ R+H G+KP  C  CGK    K +L  H     MN    +  
Sbjct: 10  CPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-- 66
Query: 283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG 336
             C +C  ++     L++HM  HTGE  + C  C Q+F Q+     H    H G
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 193 CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQG 252
           C +T+     L  H+   H+    +        E  C   GKS+  K  L  +H R H G
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE--CPREGKSFKAKYKLV-NHIRVHTG 87
Query: 253 KKPV-CTI--CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTG 307
           +KP  C    CGK+     +L  H  THTG KP  CE   C R ++ ++  K HM  HT 
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147
Query: 308 ETS 310
           + S
Sbjct: 148 DKS 150

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCH 314
           C   GK    K  L NH+  HTG KP  C    CG+ ++ +  LK+H   HTGE    C 
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 315 L--CPQKFRQRSSYTLHYKTH 333
              C ++F   S    H   H
Sbjct: 125 FEGCDRRFANSSDRKKHMHVH 145

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 224 KREFICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKP 282
           +R + CD CGKS+     L++ H+R H G+KP  C  CGK  I +  L  H   HTG  P
Sbjct: 16  RRRYKCDECGKSFSHSSDLSK-HRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 218 KRTAILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV---CTICGKMLIDKRSLAN 272
           KRTA       CD   CGK+Y +   L  H  R H G+KP       CG        L  
Sbjct: 1   KRTAT----HTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTR 55
Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH 305
           H   HTG +P  C+ C R++S + +L +HM  H
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHLCP 317
           CGK       L  H+ THTG KP+ C+   CG  ++ +  L  H   HTG     C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 318 QKFRQRSSYTLHYKTH 333
           + F +     LH K H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 215 ELEKRTAILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPV-CTI--CGKMLIDKRS 269
           +LEKR     R   CD   C K Y +   L  H  R H G+KP  CT   C         
Sbjct: 9   DLEKR-----RIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDE 62
Query: 270 LANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH 305
           L  H   HTG KP  C +C RS+S + +L +HM  H
Sbjct: 63  LTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 228 ICDV--CGKSYVRKGALTEHHQREHQGKKPV---CTICGKMLIDKRSLANHMNTHTGLKP 282
            CD   CGK+Y +   L  H  R H G+KP       CG        L  H   HTG +P
Sbjct: 8   TCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 66
Query: 283 HCCEICGRSYSTAAYLKVHMSCH 305
             C+ C R++S + +L +HM  H
Sbjct: 67  FQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHLCP 317
           CGK       L  H+ THTG KP+ C+   CG  ++ +  L  H   HTG     C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 318 QKFRQRSSYTLHYKTH 333
           + F +     LH K H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 21/159 (13%)
Query: 98  KTKCVCHYCNRTFDSKAKIQEHIISSHMH--EKLYQCDFCGSQQ-----RTKCRFYYHLR 150
           +T C    C++ FDS+ ++  HI S H+H   K + C + G  +     + +     H+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 151 DKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYY--CRKTYCHKPNLTNHIQ 208
                KP   + E C + +++ E L++HL  H   K Y C +  C K + +  +   H  
Sbjct: 61  RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH-- 118
Query: 209 NVHLKSELEKRTAILKREFICDV--CGKSYVRKGALTEH 245
                   + RT   ++ ++C +  C K Y    +L +H
Sbjct: 119 --------QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 230 DVCGKSYVRKGALTEHHQREH---QGKKPVCTICG-----KMLIDKRSLANHMNTHTGLK 281
           D C + +  +  L  H   EH   + K+ VC   G     +    +  L  HM  HTG K
Sbjct: 7   DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEK 66
Query: 282 PHCC--EICGRSYSTAAYLKVHMSCHTGETSHTC--HLCPQKFRQRSSYTLHYKTHHPGV 337
           PH C  E C +SYS    LK H+  HTGE  + C    C + F   S    H    H   
Sbjct: 67  PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 126
Query: 338 IP 339
            P
Sbjct: 127 KP 128

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGL--KPHCC 285
           C++CGK + R       H+  H G+KP  C +CG     K  ++ H+ +H G   KP+ C
Sbjct: 10  CEICGKIF-RDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 286 EICGRSYSTAAYLKVHM-SCHTGETS 310
           + CG+ +S   +L  H+   H+G +S
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHSGPSS 94

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           C  C      K +LA+H   HTG KP+ C ICG  ++  A LK H   H+GE
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIP 339
           +KP  C IC R++S + +L  H+  HTGE    C +C +KF +      H    H  ++P
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--ILP 58

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	343
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-18
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-16
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	9e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	6e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	1e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	3e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  102 bits (258), Expect = 2e-26
 Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 13/173 (7%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           C  C + F++ + L  H   H   K Y+C  C K++  K +LT H Q  H     EK   
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTG---EK--- 76

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGL 280
                + C  CGKS+ ++  L  H QR H G+KP  C  CGK       L  H  THTG 
Sbjct: 77  ----PYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           KP+ C  CG+S+S    L  H   HTGE  + C  C + F +R +  +H +TH
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.0 bits (222), Expect = 2e-21
 Identities = 55/148 (37%), Positives = 72/148 (48%), Gaps = 13/148 (8%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           C  C + F+ K+ L  H   H   K Y+C  C K++  + NL  H Q  H     EK   
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTHTG---EK--- 104

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGL 280
                + C  CGKS+ +   L  H QR H G+KP  C  CGK    + +L  H  THTG 
Sbjct: 105 ----PYACPECGKSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           KP+ C  CG+S+S    L VH   HTG+
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHTGK 187

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 76.3 bits (189), Expect = 9e-17
 Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 235 SYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYS 293
           S     +          G+KP  C  CGK       LA H  THTG KP+ C  CG+S+S
Sbjct: 2   SEFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60

Query: 294 TAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
               L  H   HTGE  + C  C + F QR++   H +TH
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 69.4 bits (171), Expect = 3e-14
 Identities = 60/183 (32%), Positives = 78/183 (42%), Gaps = 20/183 (10%)

Query: 103 CHYCNRTFDSKAKIQEH--IISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANL 160
           C  C ++F     + EH      H  EK Y+C  CG     K     H R     KP   
Sbjct: 24  CPECGKSFSRSDHLAEHQRT---HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK- 79

Query: 161 SCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRT 220
            C  C + F+++  LR+H   H   K Y C  C K++    +L  H Q  H     EK  
Sbjct: 80  -CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH-QRTHTG---EK-- 132

Query: 221 AILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTG 279
                 + C  CGKS+ R+  L  H QR H G+KP  C  CGK    + +L  H  THTG
Sbjct: 133 -----PYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

Query: 280 LKP 282
            K 
Sbjct: 187 KKT 189

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.0 bits (206), Expect = 6e-20
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEIC 288
           C K Y +   L  H  R+H G+KP  C    C +       L  H   HTG+KP  C+ C
Sbjct: 14  CNKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTC 72

Query: 289 GRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH 333
            R +S + +LK H   HTGE   +C    C +KF +      H+  H
Sbjct: 73  QRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.4 bits (202), Expect = 3e-19
 Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 6/110 (5%)

Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHM---NTHTGLKPHC 284
           C  C K ++ K  L   H R+H G+KP  C  CGK    K +L  H      +   +   
Sbjct: 10  CPTCHKKFLSKYYLK-VHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 285 CEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLH-YKTH 333
           C +C  ++     L++HM  HTGE  + C  C Q+F Q+     H  K H
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 49.0 bits (118), Expect = 1e-07
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLH 329
            +G     C  C + + +  YLKVH   HTGE    C  C + + ++ +   H
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 16/134 (11%)

Query: 124 HMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHK 183
                  +C  C  +  +K     H R     KP    C  C + + +KE L  H A + 
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKP--FECPKCGKCYFRKENLLEHEARNC 59

Query: 184 I---GKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKG 240
           +    + + C  C++T+  +  L  H    H     E         + C  C + +++K 
Sbjct: 60  MNRSEQVFTCSVCQETFRRRMELRLH-MVSHTG---EM-------PYKCSSCSQQFMQKK 108

Query: 241 ALTEHHQREHQGKK 254
            L  H  + H G  
Sbjct: 109 DLQSHMIKLHSGPS 122

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.9 bits (198), Expect = 2e-18
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 22/162 (13%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCG-----KSYVRKG 240
            + +   C + +  +  L +HI + H+  E        ++EF+C   G     + +  + 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGE--------RKEFVCHWGGCSRELRPFKAQY 53

Query: 241 ALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPHCCE--ICGRSYSTA 295
            L   H R H G+KP  CT   C K      +L  H+ +HTG KP+ CE   C +++S A
Sbjct: 54  MLV-VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 296 AYLKVHMSC-HTGETSHTCHL--CPQKFRQRSSYTLHYKTHH 334
           +    H +  H+ E  + C L  C +++   SS   H KT H
Sbjct: 113 SDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIG---KNYQCYYCRKTYCHKP-----NLTNHIQNVHLK 213
            + CS+ F  +E L  H+    I    K + C++   +   +P      L  H+      
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM------ 59

Query: 214 SELEKRTAILKREFICDV--CGKSYVRKGALTEHHQREHQGKKP-VCT--ICGKMLIDKR 268
                R    ++   C    C KSY R   L  H  R H G+KP +C    C K   +  
Sbjct: 60  -----RRHTGEKPHKCTFEGCRKSYSRLENLKTH-LRSHTGEKPYMCEHEGCSKAFSNAS 113

Query: 269 SLANHMN-THTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTG 307
             A H N TH+  KP+ C++  C + Y+  + L+ H+    G
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 67.2 bits (165), Expect = 7e-14
 Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 45/188 (23%)

Query: 101 CVCHYCNRTFDSKAKIQEHIISSHMH--EKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPA 158
           C    C++ FDS+ ++  HI S H+H   K + C + G                      
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41

Query: 159 NLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYY--CRKTYCHKPNLTNHIQNVHLKSEL 216
              C    R F  + +L  H+  H   K ++C +  CRK+Y    NL  H          
Sbjct: 42  ---CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTH---------- 88

Query: 217 EKRTAILKREFIC--DVCGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLA 271
             R+   ++ ++C  + C K++       +H  R H  +KP VC +  C K   D  SL 
Sbjct: 89  -LRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147

Query: 272 NHMNTHTG 279
            H+ T  G
Sbjct: 148 KHVKTVHG 155

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 78.7 bits (195), Expect = 3e-18
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 7/107 (6%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEI--C 288
           C K +    A+ +H    H G +  VC  CGK  ++   L  H   HTG KP  C    C
Sbjct: 13  CTKMFRDNSAMRKH-LHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC 70

Query: 289 GRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH 333
           G+ +S    L+ H+  HTG+  + C    C +KF Q ++   H  TH
Sbjct: 71  GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPH 283
            +C  CGK++V    L  H Q  H G+KP  CT   CGK      +L  H+  HTG +P+
Sbjct: 35  HVCAECGKAFVESSKLKRH-QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 93

Query: 284 CCEI--CGRSYSTAAYLKVHMSCHTGE 308
            C    C + ++ +  LK H+  H   
Sbjct: 94  VCPFDGCNKKFAQSTNLKSHILTHAKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 20/134 (14%)

Query: 156 KPANLSCEFCSRIFTKKELLRSHLAVHKIG-KNYQCYYCRKTYCHKPNLTNHIQNVHLKS 214
           +      + C+++F     +R HL  H  G + + C  C K +     L  H Q VH   
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVCAECGKAFVESSKLKRH-QLVHTG- 59

Query: 215 ELEKRTAILKREFICDV--CGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRS 269
             EK        F C    CGK +     L   H R H G +P VC    C K      +
Sbjct: 60  --EK-------PFQCTFEGCGKRFSLDFNLR-THVRIHTGDRPYVCPFDGCNKKFAQSTN 109

Query: 270 LANHMNTHTGLKPH 283
           L +H+ TH   K +
Sbjct: 110 LKSHILTHAKAKNN 123

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 79.3 bits (196), Expect = 4e-18
 Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 8/154 (5%)

Query: 165 CSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILK 224
                   +   S   + +   +     C +T+     L  H+   H      ++   + 
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH--VGGPEQNNHVC 60

Query: 225 REFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLK 281
               C   GKS+  K  L  +H R H G+KP  C    CGK+     +L  H  THTG K
Sbjct: 61  YWEECPREGKSFKAKYKLV-NHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEK 119

Query: 282 PHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTC 313
           P  CE   C R ++ ++  K HM  HT + S   
Sbjct: 120 PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.1 bits (193), Expect = 9e-18
 Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 16/138 (11%)

Query: 211 HLKSELE-KRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKP----------VCTI 259
            +K EL  K     +       C +++     L   H        P           C  
Sbjct: 9   PIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELV-THVTMEHVGGPEQNNHVCYWEECPR 67

Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHL-- 315
            GK    K  L NH+  HTG KP  C    CG+ ++ +  LK+H   HTGE    C    
Sbjct: 68  EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127

Query: 316 CPQKFRQRSSYTLHYKTH 333
           C ++F   S    H   H
Sbjct: 128 CDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 67.3 bits (165), Expect = 7e-14
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 14/115 (12%)

Query: 233 GKSYVRKGALTEH--HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHC----- 284
           G S      + +    +   + +       C +       L  H+       P       
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 285 ----CEICGRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH 333
               C   G+S+     L  H+  HTGE    C    C + F +  +  +H +TH
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 31/152 (20%), Positives = 53/152 (34%), Gaps = 33/152 (21%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCV-CHYCNRTFDSKAKIQEHII 121
                  C+ +F     L  H+  +H    + + H      C    ++F +K K+  H I
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH-I 82

Query: 122 SSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAV 181
             H  EK + C F G                            C +IF + E L+ H   
Sbjct: 83  RVHTGEKPFPCPFPG----------------------------CGKIFARSENLKIHKRT 114

Query: 182 HKIGKNYQCYY--CRKTYCHKPNLTNHIQNVH 211
           H   K ++C +  C + + +  +   H  +VH
Sbjct: 115 HTGEKPFKCEFEGCDRRFANSSDRKKH-MHVH 145

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEI 287
           C+VCGK + RK  L  H  R H G KP  C  C     D  SL  H+  H+  +P  C+I
Sbjct: 11  CEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 288 CGRSYSTAAYLKVHMSCHTGETSHTC 313
           C  +   ++ L VH+  HTG++  + 
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.3 bits (176), Expect = 7e-16
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 250 HQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
                P  C +CGK    K  L  HM  HTG+KP+ C+ C  + + ++ L  H+  H+ E
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 309 TSHTCHLCPQKFRQRSSYTLHYKTH 333
               C +CP   R  S  T+H ++H
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 21/58 (36%), Positives = 27/58 (46%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           +     PH CE+CG+ +S    LK HM CHTG   + C  C       SS   H + H
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 41/125 (32%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           CE C + F++K+ L++H+  H   K Y+C  C        +L                  
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNK---------------- 54

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGL 280
                                   H R H  ++P  C IC     +   L  H+ +HTG 
Sbjct: 55  ------------------------HLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

Query: 281 KPHCC 285
                
Sbjct: 91  SGPSS 95

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.4 bits (184), Expect = 6e-17
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGR 290
           CGKS+  K     H    H G +P  C +CGK    K  L  HM  HTG+KP+ C IC +
Sbjct: 15  CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73

Query: 291 SYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYT 327
            +        H    +   S+      Q   + S  +
Sbjct: 74  RFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 248 REHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTG 307
               G K     CGK    K     HM+ H GL+P+ C +CG+ +    +L  HM  HTG
Sbjct: 3   SGSSGDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

Query: 308 ETSHTCHLCPQKFRQRSSYTLHYKTH 333
              + C++C ++F  R S   H    
Sbjct: 63  IKPYECNICAKRFMWRDS--FHRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.6 bits (143), Expect = 3e-11
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEH 245
           K Y C  C K++ HK     H  ++HL     +        + C VCGK +  K  L   
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRH-MSMHLG---LR-------PYGCGVCGKKFKMKHHLV-G 55

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYL 298
           H + H G KP  C IC K  + + S   H +  +  K +      ++ + A+  
Sbjct: 56  HMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 46.7 bits (112), Expect = 5e-07
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 16/112 (14%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           C+ C + FT K     H+++H   + Y C  C K +  K +L  H   +H      K   
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTG---IK--- 64

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLAN 272
                + C++C K ++ + +    H+      K        +   +    ++
Sbjct: 65  ----PYECNICAKRFMWRDSF---HRHVTSCTKSYEAAKAEQNTTEASGPSS 109

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 73.7 bits (182), Expect = 7e-17
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGR 290
           C + + + G+LT  H R H G+KP  C IC +       L  H+ THTG KP  C+ICGR
Sbjct: 12  CDRRFSQSGSLT-RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 291 SYSTAAYLKVHMSCHTGE 308
            ++ +   K H   H  +
Sbjct: 71  KFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 69.4 bits (171), Expect = 2e-15
 Identities = 27/74 (36%), Positives = 37/74 (50%)

Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK 319
           C +      SL  H+  HTG KP  C IC R++S + +L  H+  HTGE    C +C +K
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 320 FRQRSSYTLHYKTH 333
           F +      H K H
Sbjct: 72  FARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 186 KNYQCYY--CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALT 243
           + Y C    C + +    +LT H            R    ++ F C +C +++ R   LT
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRH-----------IRIHTGQKPFQCRICMRNFSRSDHLT 51

Query: 244 EHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLK 281
            H  R H G+KP  C ICG+          H   H   K
Sbjct: 52  TH-IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.1 bits (95), Expect = 7e-05
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 12/99 (12%)

Query: 156 KPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSE 215
           +P     E C R F++   L  H+ +H   K +QC  C + +    +LT H         
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH--------- 53

Query: 216 LEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKK 254
              RT   ++ F CD+CG+ + R       H + H  +K
Sbjct: 54  --IRTHTGEKPFACDICGRKFARSDERKR-HTKIHLRQK 89

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 76.1 bits (188), Expect = 1e-16
 Identities = 44/181 (24%), Positives = 62/181 (34%), Gaps = 23/181 (12%)

Query: 165 CSRIFTKKELLRSHLAVHKIGKNYQC--YYCRKTYCHKPNLTNHIQNVHLKSELEKRTAI 222
           C   + K   L++HL  H   K + C    C K +    +LT H             T  
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-----------SLTHT 68

Query: 223 LKREFICD--VCGKSYVRKGALTEHHQREHQGKKP---VCTI--CGKMLIDKRSLANHMN 275
            ++ F CD   C   +  K  + +H        K    VC    CGK       L  H  
Sbjct: 69  GEKNFTCDSDGCDLRFTTKANMKKH-FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF 127

Query: 276 THTGLKPHCC--EICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           +HT   P+ C  E C + +S  + LK H   H G        C    +  + Y  H    
Sbjct: 128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

Query: 334 H 334
           H
Sbjct: 188 H 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 246 HQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPHCCE--ICGRSYSTAAYLKV 300
            +      K  +C+   CG        L  H+  HTG KP  C+   C + +++  +L  
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 301 HMSCHTGETSHTC--HLCPQKFRQRSSYTLHYKTHH 334
           H   HTGE + TC    C  +F  +++   H+   H
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH 98

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 272 NHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCH--LCPQKFRQRSSYT 327
                    K + C    CG +Y+    L+ H+  HTGE    C    C + F      T
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 328 LHYKTH 333
            H  TH
Sbjct: 62  RHSLTH 67

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 48/197 (24%), Positives = 63/197 (31%), Gaps = 26/197 (13%)

Query: 63  KLYECSL--CNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHI 120
           K Y CS   C  ++     L  HL    G K         C    C + F S   +  H 
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEK------PFPCKEEGCEKGFTSLHHLTRHS 64

Query: 121 ISSHMHEKLYQCD--FCGSQQRTKCRFYYHLRDKHLSKPANLSCEF--CSRIFTKKELLR 176
           ++ H  EK + CD   C  +  TK     H    H  K     C F  C + F K   L+
Sbjct: 65  LT-HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLK 123

Query: 177 SHLAVHKIGKNYQC--YYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
            H   H     Y+C    C K +     L  H + VH     +K           D C  
Sbjct: 124 VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKK----------DDSCSF 172

Query: 235 SYVRKGALTEHHQREHQ 251
                    +H    HQ
Sbjct: 173 VGKTWTLYLKHVAECHQ 189

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 73.6 bits (182), Expect = 1e-16
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
           FIC  CG+ + +   L   H+R H  ++P  C IC K    +  L +H   H+  KP  C
Sbjct: 18  FICKFCGRHFTKSYNLL-IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76

Query: 286 EICGRSYSTAAYLKVHMSCHTGETSHTC 313
           + CG+ +  +  L VH + H   +S T 
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 73.2 bits (181), Expect = 2e-16
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSC 304
            +   + KK  +C  CG+      +L  H  THT  +P+ C+IC +++    +L+ H   
Sbjct: 8   GRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI 67

Query: 305 HTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           H+ E    C  C + F Q  +  +H   H
Sbjct: 68  HSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 30/132 (22%), Positives = 42/132 (31%), Gaps = 42/132 (31%)

Query: 124 HMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHK 183
              +K + C FCG                              R FTK   L  H   H 
Sbjct: 12  SKTKKEFICKFCG------------------------------RHFTKSYNLLIHERTHT 41

Query: 184 IGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALT 243
             + Y C  C K +  + +L +H + +H K   EK        F C  CGK + +   L 
Sbjct: 42  DERPYTCDICHKAFRRQDHLRDH-RYIHSK---EK-------PFKCQECGKGFCQSRTLA 90

Query: 244 EHHQREHQGKKP 255
             H+  H     
Sbjct: 91  V-HKTLHMQTSS 101

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 70.2 bits (173), Expect = 1e-15
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 250 HQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
             G     C ICGK+  D   L  H  +H+G KP+ C +CG  +     +  H+  H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 309 TS--HTCHLCPQKFRQRSSYTLHYKTHHPG 336
               + C  C + F +      H K  H G
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.7 bits (164), Expect = 3e-14
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTG--LKPH 283
             C++CGK +     L   H+  H G+KP  C +CG     K  ++ H+ +H G   KP+
Sbjct: 8   VACEICGKIFRDVYHLN-RHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 284 CCEICGRSYSTAAYLKVHM-SCHTGETS 310
            C+ CG+ +S   +L  H+   H+G +S
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVHSGPSS 94

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 9/93 (9%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           CE C +IF     L  H   H   K Y C  C   +  K  ++ H    H          
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSH--------DG 60

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKK 254
            + + +IC  CGK + R   L  H ++ H G  
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 67.8 bits (166), Expect = 8e-15
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 3/67 (4%)

Query: 277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHT---GETSHTCHLCPQKFRQRSSYTLHYKTH 333
            +G     CEICG +    A L  H   H          C  C ++F +  S   H    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 334 HPGVIPP 340
           HP ++  
Sbjct: 62  HPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 60.1 bits (146), Expect = 4e-12
 Identities = 16/74 (21%), Positives = 19/74 (25%), Gaps = 4/74 (5%)

Query: 250 HQGKKP-VCTICGKMLIDKRSLANHMNTHT---GLKPHCCEICGRSYSTAAYLKVHMSCH 305
             G     C ICG     K SL  H   H          CE CG+ +     +  H S  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 306 TGETSHTCHLCPQK 319
                         
Sbjct: 62  HPALLLAPQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.9 bits (122), Expect = 9e-09
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 227 FICDVCGKSYVRKGALTEHHQREH---QGKKP-VCTICGKMLIDKRSLANHMNT-HTGLK 281
             C++CG +  +K +L  H QR+H          C  CGK      S+A H +  H  L 
Sbjct: 8   LQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66

Query: 282 PHCCEICGRS 291
               E  G S
Sbjct: 67  LAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 8/72 (11%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEH 245
              QC  C  T   K +L  H Q  H ++    R       F C+ CGK + +  ++  H
Sbjct: 6   SGLQCEICGFTCRQKASLNWH-QRKHAETVAALR-------FPCEFCGKRFEKPDSVAAH 57

Query: 246 HQREHQGKKPVC 257
             + H       
Sbjct: 58  RSKSHPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 127 EKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANL--SCEFCSRIFTKKELLRSHLAVHKI 184
               QC+ CG   R K    +H R KH    A L   CEFC + F K + + +H +    
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63

Query: 185 GKNYQC 190
                 
Sbjct: 64  ALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 3/55 (5%)

Query: 160 LSCEFCSRIFTKKELLRSHLAVHKIG---KNYQCYYCRKTYCHKPNLTNHIQNVH 211
           L CE C     +K  L  H   H        + C +C K +    ++  H    H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 66.7 bits (164), Expect = 2e-14
 Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEI 287
           C +CGKS+ R   L+  H   H   +P  C  CGK    K  +  H   HTG KPH C++
Sbjct: 4   CKICGKSFKRSSTLS-THLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 288 CGRSYSTAAYLKVHMSCHTG 307
           CG+++S ++ L  H   HTG
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 62.8 bits (154), Expect = 6e-13
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           C ICGK      +L+ H+  H+  +P+ C+ CG+ +   + +K H   HTGE  H C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 317 PQKFRQRSSYTLHYKTH 333
            + F Q S+   H + H
Sbjct: 64  GKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 37.4 bits (88), Expect = 5e-04
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           C+ C + F +   L +HL +H   + Y C YC K +  K ++  H   +H     EK   
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTG---EK--- 56

Query: 222 ILKREFICDVCGKSYVRKGALTEHHQREHQG 252
                  C VCGK++ +   L   H R+H G
Sbjct: 57  ----PHKCQVCGKAFSQSSNLIT-HSRKHTG 82

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.8 bits (164), Expect = 2e-14
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS--HTCHLCPQKFRQRSSY 326
           S  +   TH+G KP+ C IC   ++ +  +K+H+     E      C  C     ++S  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 327 TLHYKTHHPG 336
            +H +  H  
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.6 bits (148), Expect = 3e-12
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 4/67 (5%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTG--LKPHCCEICGRSYSTAAYLKVHM 302
             R H G+KP  C IC        ++  H+       +    C  C    +  + L VH+
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 303 -SCHTGE 308
              H+  
Sbjct: 66  RKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 18/81 (22%), Positives = 25/81 (30%), Gaps = 9/81 (11%)

Query: 175 LRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
             S    H   K Y+CY C   +     +  HI                  +F C  C  
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QK--------HTENVAKFHCPHCDT 53

Query: 235 SYVRKGALTEHHQREHQGKKP 255
              RK  L  H +++H    P
Sbjct: 54  VIARKSDLGVHLRKQHSYSGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 2e-06
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 5/62 (8%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQG--KKP-VCTICGKMLIDKRSLANHM-NTHTGLKP 282
           + C +C   + + G +  H   +          C  C  ++  K  L  H+   H+   P
Sbjct: 16  YECYICHARFTQSGTMKMH-ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74

Query: 283 HC 284
             
Sbjct: 75  SS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 161 SCEFCSRIFTKKELLRSHLAVH--KIGKNYQCYYCRKTYCHKPNLTNHIQNVH 211
            C  C   FT+   ++ H+     +    + C +C      K +L  H++  H
Sbjct: 17  ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 298 LKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP 340
                  H+GE  + C++C  +F Q  +  +H    H   +  
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK 45

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 62.9 bits (154), Expect = 4e-13
 Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS 303
           HH       KP  C  C      K +LA+H   HTG KP+ C ICG  ++  A LK H  
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

Query: 304 CHTGE 308
            H+GE
Sbjct: 67  IHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.2 bits (142), Expect = 2e-11
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL 328
              +H +     KP+ C+ C  S+     L  H + HTGE  + C++C  +F + ++   
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 329 HYKTH 333
           H + H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
           CD C  S+  KG L  H +  H G+KP  C ICG       +L  H   H+G KP+
Sbjct: 20  CDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 16/85 (18%)

Query: 175 LRSHLAVHKI----GKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICD 230
           +  H   H       K Y+C  C+ ++ +K NL +H           K     ++ + C+
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-----------KTVHTGEKPYRCN 49

Query: 231 VCGKSYVRKGALTEHHQREHQGKKP 255
           +CG  + R   L   H R H G+KP
Sbjct: 50  ICGAQFNRPANLKT-HTRIHSGEKP 73

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 62.6 bits (153), Expect = 1e-12
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 246 HQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMS 303
            +R H    P C    K+      L  H+ THTG KP+ C  E C   ++ +  L  H  
Sbjct: 12  KRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR 68

Query: 304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
            HTG     C +C + F +     LH K H
Sbjct: 69  KHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 59.9 bits (146), Expect = 8e-12
 Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 224 KREFICDV--CGKSYVRKGALTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHT 278
           +R   CD   C K Y +   L  H  R H G+KP  CT   C         L  H   HT
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71

Query: 279 GLKPHCCEICGRSYSTAAYLKVHMSCHT 306
           G KP  C +C RS+S + +L +HM  H 
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 5/76 (6%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTG----LKPHCCEICGRSYSTAAYLKV 300
             R H G+KP  C+ C K    K+ L  H   +           C  CG++++    +  
Sbjct: 6   SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65

Query: 301 HMSCHTGETSHTCHLC 316
           H     G         
Sbjct: 66  HADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 227 FICDVCGKSYVRKGALTEH---HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKP 282
           + C  C K++ +K  L  H   +   +      VC+ CGK    + ++A H +   G   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 283 HCCEICGRSY 292
              E  G S 
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS----HTCHLCPQKFRQRS 324
           S  +   THTG KP+ C  C +++     L +H   +           C  C + F +R+
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 325 SYTLHYKTH 333
           +   H    
Sbjct: 62  TMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 13/44 (29%), Positives = 19/44 (43%)

Query: 298 LKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPK 341
                  HTGE  + C  C + FRQ+    +H+K +H     P 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA 46

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.2 bits (147), Expect = 5e-12
 Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 257 CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           C IC +       L  H+ THTG KP  C+ICGR ++ +   K H               
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKV 64

Query: 317 PQKFRQRSS---YTLHYKTH 333
            +   +           K  
Sbjct: 65  EELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHH 334
           +KP  C IC R++S + +L  H+  HTGE    C +C +KF +      H    H
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 15/99 (15%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEH 245
           K +QC  C + +    +LT H            RT   ++ F CD+CG+ + R       
Sbjct: 2   KPFQCRICMRNFSRSDHLTTH-----------IRTHTGEKPFACDICGRKFARSDERK-R 49

Query: 246 HQREHQGKKPVCTICGKMLIDKRSLANHMN---THTGLK 281
           H+        +     ++L     L N +       G +
Sbjct: 50  HRDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 14/95 (14%)

Query: 162 CEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTA 221
           C  C R F++ + L +H+  H   K + C  C + +        H +++           
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQ----HILP-- 58

Query: 222 ILKREFICDVCGKSYVRKGALTEH--HQREHQGKK 254
                 + D   +   +   L       ++  G++
Sbjct: 59  -----ILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 249 EHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMSCH 305
           +           CGK       L  H+ THTG KP+ C  + CG  ++ +  L  H   H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 306 TGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           TG     C  C + F +     LH K H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 30/127 (23%), Positives = 41/127 (32%), Gaps = 43/127 (33%)

Query: 182 HKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGA 241
                      C KTY          ++ HLK+                           
Sbjct: 2   RTATHTCDYAGCGKTY---------TKSSHLKA--------------------------- 25

Query: 242 LTEHHQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYL 298
               H R H G+KP  C    CG        L  H   HTG +P  C+ C R++S + +L
Sbjct: 26  ----HLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL 81

Query: 299 KVHMSCH 305
            +HM  H
Sbjct: 82  ALHMKRH 88

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 225 REFICDV--CGKSYVRKGALTEHHQREHQGKKP-VCT--ICGKMLIDKRSLANHMNTHTG 279
               CD   CG+ +  +  L  H + +H  +K   C    CGK    K+ L  HM  H+ 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 280 LKPHCCEICGRSY 292
            + + CE  G S 
Sbjct: 66  TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 53.7 bits (130), Expect = 9e-10
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 250 HQGKKP-VCTI--CGKMLIDKRSLANHM-NTHTGLKPHCCE--ICGRSYSTAAYLKVHMS 303
             G     C    CG++  +++ L +H    H   K   C    CG+S++   +LK HM 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 304 CHTGETSHTCHLC 316
            H+    + C   
Sbjct: 62  LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 277 HTGLKPHCCEI--CGRSYSTAAYLKVHM-SCHTGETSHTC--HLCPQKFRQRSSYTLHYK 331
            +G     C+   CGR +S   YL  H    H  + S +C    C + F  +     H K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 332 TH 333
            H
Sbjct: 62  LH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 186 KNYQCYY--CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICD--VCGKSYVRKGA 241
               C +  C + + ++  L +H +  H+    +K        F C    CGKS+  K  
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH---QKS-------FSCPEPACGKSFNFKKH 55

Query: 242 LTEHHQREHQGKKP-VCTICGK 262
           L E H + H   +  +C   G 
Sbjct: 56  LKE-HMKLHSDTRDYICEFSGP 76

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 1/67 (1%)

Query: 248 REHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHT 306
                  P  C+ C      K +L  H   H   +P  C  C       + L  HM    
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

Query: 307 GETSHTC 313
           G+ S   
Sbjct: 62  GDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.4 bits (132), Expect = 4e-10
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHH 334
           + +   P  C  C  S S+ A L++H   H  +    C+ C    +Q S+ + H K  H
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMSCHTGETSHTCHLCP 317
           CGK       L  H  +HT   P+ C  E C + +S  + LK H   H G        C 
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 318 QKFRQRSSYTLHYKTHH 334
              +  + Y  H    H
Sbjct: 69  FVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 48.8 bits (117), Expect = 5e-08
 Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 4/74 (5%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKP-VCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEIC 288
           CGK++ +   L  H Q  H  + P  C    C K       L  H   H G      + C
Sbjct: 9   CGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 67

Query: 289 GRSYSTAAYLKVHM 302
                T      H+
Sbjct: 68  SFVGKTWTLYLKHV 81

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 56.7 bits (138), Expect = 6e-11
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSC 304
               H G+KP  C  CGK       L  H   HTG KP+ C  CG+++S  + L  H   
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 305 HTGE 308
           HT  
Sbjct: 65  HTSG 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 53.6 bits (130), Expect = 7e-10
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 270 LANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLH 329
            +     H+G KP+ C  CG+++S ++ L  H   HTGE  + C  C + F Q S    H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 330 YKTH 333
            + H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
           + C  CGK++ R   L +H QR H G+KP  C  CGK       L NH   HT     
Sbjct: 15  YGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 12/81 (14%)

Query: 175 LRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
                 +H   K Y C  C K +     L  H Q VH     EK        + C  CGK
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTG---EKP-------YKCLECGK 50

Query: 235 SYVRKGALTEHHQREHQGKKP 255
           ++ +   L   HQR H     
Sbjct: 51  AFSQNSGLIN-HQRIHTSGPS 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.7 bits (138), Expect = 7e-11
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSC 304
            + + + ++   C  CGK       L+ H  THTG KP+ C+ CG+++   ++L  H   
Sbjct: 9   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

Query: 305 HTGE 308
           HTG 
Sbjct: 69  HTGS 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.1 bits (134), Expect = 3e-10
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL 328
           S           + + C+ CG+S+S ++ L  H   HTGE  + C  C + F QRS    
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 329 HYKTH 333
           H++ H
Sbjct: 65  HHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.4 bits (114), Expect = 1e-07
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 229 CDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
           CD CGKS+     L++H +R H G+KP  C  CGK  I +  L  H   HTG  P 
Sbjct: 21  CDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 4e-04
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 175 LRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
                   +  + Y+C  C K++ H  +L+ H +  H     EK        + CD CGK
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTG---EK-------PYKCDECGK 54

Query: 235 SYVRKGALTEHHQREHQGKKP 255
           +++++  L   H R H G  P
Sbjct: 55  AFIQRSHLIG-HHRVHTGSGP 74

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.0 bits (136), Expect = 8e-11
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHM--SCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           T  G   + C++C R Y+  +    H   S       + C  C ++F ++ + T H K  
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 334 HP 335
           H 
Sbjct: 64  HK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 247 QREHQGKKP-VCTICGKMLIDKRSLANHMNT--HTGLKPHCCEICGRSYSTAAYLKVHMS 303
           +   +G+    C +C ++     +   H  T     +K + C  C + ++    +  H+ 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

Query: 304 CHTG 307
               
Sbjct: 62  IIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 227 FICDVCGKSYVRKGALTEHHQ-REHQGKKP-VCTICGKMLIDKRSLANHMNTHTGL 280
           + C VC + Y        H+     +  K   C  C K    K ++  H+     +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEH 245
             Y+C  C + Y H  N   H    H ++          + + C  C K + RK  +T  
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNV---------KVYPCPFCFKEFTRKDNMTA- 58

Query: 246 HQREHQG 252
           H +    
Sbjct: 59  HVKIIHK 65

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHT 312
              +  G KP+ CEICG  +     LK H+  HTG    +
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
                 G+KP  C ICG      ++L +H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.3 bits (122), Expect = 2e-08
 Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 227 FICDVCGKSYVRKGALTEH-----HQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLK 281
           F C  C  +Y     LT H     H R+   +             KRSL          K
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 282 PHCCEICGRSYSTAAYLKVHM 302
              C  CG S+ +   L VHM
Sbjct: 80  VLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 20/100 (20%), Positives = 32/100 (32%), Gaps = 6/100 (6%)

Query: 175 LRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
            + + ++      ++C  C   Y     LT H+       E              +    
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN------ETGHYRDDNHETDNNNPKRW 60

Query: 235 SYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHM 274
           S  RK +L E   +E   K   C  CG      + L+ HM
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.1 bits (106), Expect = 2e-06
 Identities = 16/96 (16%), Positives = 21/96 (21%), Gaps = 7/96 (7%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMN-----THTGLKPHCCEICGRSYSTAAYLK 299
           +     G     C  C         L  HMN          +         S      L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLH-YKTHH 334
                   +    C  C   F      ++H  KT H
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL 328
           S   + +  TG     C+ C  +Y T   L VHM+  TG      H       +R S   
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPR 64

Query: 329 HYKTH 333
                
Sbjct: 65  KRSLL 69

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 48.5 bits (116), Expect = 5e-08
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 267 KRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQ 322
               +      + ++ H C    CG++Y  +++LK H   HTGE   +C    C ++F +
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 323 RSSYTLHYKTH 333
               + H +TH
Sbjct: 62  SDELSRHRRTH 72

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
              +  G KP+ CE CG  +   A+L+ H+  HTG 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS 37

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
                 G+KP  C  CG   +    L  H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 16/53 (30%), Positives = 22/53 (41%)

Query: 256 VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           +C  CG        L  H+ THT ++P+ C  C  S+ T   L  HM      
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 4e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 285 CEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           CE CG      + LK H+  HT    + C  C   F+ + + T H K+ 
Sbjct: 4   CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.2 bits (83), Expect = 7e-04
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLK 281
           +IC+ CG    +   L + H R H   +P  CT C      K +L  HM +    K
Sbjct: 2   YICEECGIRXKKPSMLKK-HIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG 336
           +   CE+C R+++   +LK H   HT E  + C LC + F +R     H +  H G
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 254 KP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGETS 310
           +  VC +C +    +  L  H  +HT  KP+ C +C R+++    L  H    H+G   
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLG 59

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGKMLIDKRSLANHMN-THTG 279
           F+C+VC +++ R+  L  H  R H  +KP  C +C +    +  L  H    H+G
Sbjct: 3   FVCEVCTRAFARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 11/67 (16%)

Query: 186 KNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEH 245
           +++ C  C + +  + +L  H    H     EK        + C +C +++ R+  L  H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRH-YRSHTN---EK-------PYPCGLCNRAFTRRDLLIRH 49

Query: 246 HQREHQG 252
            Q+ H G
Sbjct: 50  AQKIHSG 56

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 48.0 bits (114), Expect = 1e-07
 Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 9/71 (12%)

Query: 224 KREFICDVCGKSYVRKGALTEHHQREHQGKKP---------VCTICGKMLIDKRSLANHM 274
           +       C +++     L  H   EH G             C   GK    K  L NH+
Sbjct: 23  QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 275 NTHTGLKPHCC 285
             HTG K    
Sbjct: 83  RVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.0 bits (88), Expect = 4e-04
 Identities = 15/74 (20%), Positives = 21/74 (28%), Gaps = 9/74 (12%)

Query: 249 EHQGKKPVCTICGKMLIDKRSLANHMN-THTGLKPHC--------CEICGRSYSTAAYLK 299
           +          C +       L  H+   H G             C   G+S+     L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 300 VHMSCHTGETSHTC 313
            H+  HTGE S   
Sbjct: 80  NHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 37.6 bits (87), Expect = 5e-04
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 9/67 (13%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGETSHTCHLCP--------QKFRQRSSY 326
                     + C R++ST   L  H++  H G      H+C         + F+ +   
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 327 TLHYKTH 333
             H + H
Sbjct: 79  VNHIRVH 85

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 270 LANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYT 327
           L N++      +P+ C  E C R +S +  L  H+  HTG+    C +C + F +    T
Sbjct: 9   LLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 328 LHYKTH 333
            H +TH
Sbjct: 67  THIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 246 HQREHQGKKP-VCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHM 302
                   +P  C +  C +       L  H+  HTG KP  C IC R++S + +L  H+
Sbjct: 10  LNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

Query: 303 SCHT 306
             HT
Sbjct: 70  RTHT 73

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP+ C  CG+++   + L VH   H G +  + 
Sbjct: 1   GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                  G+KP  C  CGK  I K  L  H  TH G+     
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KP  C+ CG ++S +  L  H+  H        
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CG       SL  H+ +H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C +CG+++  +A+L  H+  HT ET    
Sbjct: 1   GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C +CGK  +    L  H+  HT        
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 27/43 (62%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG+KP+ C  CG+++ + +YL +H   HTGE+  + 
Sbjct: 1   GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G KP VC  CGK    K  L  H  THTG      
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +  K H C  CGR ++  ++L  H   HTGE     
Sbjct: 1   GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                   K   C  CG+    K  L  H   HTG KP   
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+S++  + L++H  CHTGE     
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C+ CGK    K  L  H   HTG +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/43 (23%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G +P+ C  CG+++   ++L  H+  H  E S   
Sbjct: 1   GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 10/41 (24%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++P  C  CGK       L  H+  H   K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KP  C  CG+++   + L +H   H  +     
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  CT CGK    K  L  H  TH   K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICG 289
                 G+KP  C  CGK         +H  +H+G KP      G
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP  CE CG+ + T +    H   H+GE     
Sbjct: 1   GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG K + C+ CG+S+S A  L  H   H+GE     
Sbjct: 1   GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+K   C  CGK       L  H   H+G KP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++  G KP+ C  CG+++S+ +YL +HM  H+GE     
Sbjct: 1   GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C+ CGK    K  L  HM TH+G KP    
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C+ICG+S+   + L  H   HT E     
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C ICGK    +  L  H   HT  KP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++P +CT+CGK   D+ +L  H   HTG KP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG +P+ C +CG++++  + L  H   HTGE     
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG+KP+ C  C +++S  + L VH   HTG      
Sbjct: 1   GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G KP  C+ C K    K  L  H  +HTG+KP   
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C  CG+ +S  + L VH   HTGE     
Sbjct: 1   GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK    + +L  H   HTG KP   
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +  KP+ CE CG+ Y+    L +H   H GE +   
Sbjct: 1   GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                  +KP  C  CGK    + +L  H   H G K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHM-SCHTGETSHTCHLCPQKFRQ 322
           +  ++ +  KP+ C+ CG+ +S   +L  H+   HT E  H C +       
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHM-NTHTGLKPHCCEICGRSYSTA 295
                   KP +C  CGK       L  H+   HT  +PH C++     S+ 
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 2e-05
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP-VCTICGK 262
           +IC  CGK + R   L  H ++ H  ++P  C +   
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
            +  ++  G + H C  CG+ +  A+    H   HTGE
Sbjct: 1   GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE 38

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++   C+ CGK  +   +   H   HTG KP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP +C  CGK    + +L  H   HT  KP    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG++++  + L  H   HT +     
Sbjct: 1   GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+ P +C+ CGK+   K +L  H   HTG +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
           +  ++ TG  P  C  CG+ ++    L +H   HTGE     
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
            +  ++ +G K H C+ CG+++   + L++H   H GE
Sbjct: 1   GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE 38

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C  CG+S+     L  H   HTGE S   
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  CT CGK    K +L  H   HTG K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G +P  C  CG+ +   ++L  H+  H+ E S   
Sbjct: 1   GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++P  C  CGK    +  LA H+  H+  K    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG +P+ C  CG+++ T + L  H   HTGE     
Sbjct: 1   GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++P  C  CGK    K SL  H  +HTG KP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C  CGK    K  L+ H  THTG KP    
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ +G KP+ C  CG+++S  + L  H   HTGE     
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 8e-06
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG++++  + L +H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C+ CGK    K  L  H  +HTG +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 8e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK   D+ +L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG++++  + L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP  CE CG+ ++  + L  H   HTGE     
Sbjct: 1   GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK       L +H   HTG KP   
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C+ C K    K +L  H  THTG KP    
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C  C ++++T + L VH   HTGE     
Sbjct: 1   GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++  G+ P+ C  C +S+S    L VH   HT E     
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G  P  C+ C K    K  L  H   HT  KP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+S+   + L VH   HTGE     
Sbjct: 1   GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C+ CGK  I K  L  H   HTG  P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK    +  L  H   HTG K    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
           +  ++ +G KP+ C  CG+ Y     L  H   HTGE     
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP+ C+ C +++    +L  H   HTGE S   
Sbjct: 1   GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 GKKP  C  C K  I    L  H   HTG +     
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG +PH C  CG+S+  +A+L  H   HTGE     
Sbjct: 1   GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G++P  C  CGK  I    L  H   HTG KP    
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 11/43 (25%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG + + C  CG++++  + L +H   HTGE     
Sbjct: 1   GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G++   C+ CGK    K +L  H   HTG KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C++C +S+   + L VH   HTGE     
Sbjct: 1   GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C +C K      SL  H   HTG KP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             +G KP  C  C +++S+ +YL VH   H  E     
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
               V  +   R   LT   Q+          I    L+D+ S    +     +    C 
Sbjct: 20  IFIHVTLEELKRYHQLT-PEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCP 78

Query: 287 ICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG 336
           +C   +S++  LK H+     E +  C +C ++F    S   H    H  
Sbjct: 79  LCLMPFSSSVSLKQHI--RYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI 126

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++  G K   C  C   +S A+ L++H + H GE     
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 12/41 (29%), Positives = 13/41 (31%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+K   C  C        SL  H N H G KP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  C ++++T + L VH   HTGE+  + 
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.5 bits (96), Expect = 1e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  C K    K +L  H  THTG      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 9/43 (20%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ T  K + C  CG++++   +L  H   HT ++  + 
Sbjct: 1   GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C++C ++++  A+L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C +C K    K  LA H  THTG KP    
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ CE CG+ +     L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK  I +R L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/43 (37%), Positives = 24/43 (55%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C ICG+S++  + L VH   HTGE     
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C+ICGK    K  L  H   HTG KP   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
            +  ++ +G KP  CE CG+ ++  ++L  H   HTGE      
Sbjct: 1   GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK       L +H   HTG KP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP +C  CGK  I K  L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+S+   ++L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
              +  G KP+ C+ CG+++S    L VH+  HTG 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
                 G+KP  C  CGK    K SL  H+  HTG  P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C  CGK   D   L  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C  CG+++S    L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP VC  CGK       L  H   HTG KP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ +G KP+ C+ CG+++  +A L  H   HTGE     
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 271 ANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C    CG  +S +  L  H   H+G      
Sbjct: 1   GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)

Query: 246 HQREHQGKKP-VCT--ICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  CT   CG        L+ H  +H+G+KP    
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++  G KP+ C  CG+S+S +  L  H   HT E     
Sbjct: 1   GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                +G+KP  C+ CGK       L  H  THT  KP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G K   CT CGK    K +L+ H   HTG KP    
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG K   C  CG++++  + L +H   HTGE     
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++  G K   C  C ++++ ++ L VH   HTGE     
Sbjct: 1   GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 GKK   C  C K      SL  H   HTG KP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C  CGK    + SL  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+++S  + L  H + HTG+     
Sbjct: 1   GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C +C K      SL  H   H+G KP    
Sbjct: 2   SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C++C +++S  A L  H   H+GE     
Sbjct: 1   GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
            +  ++ TG KP+ CE CG+ Y++   L +H   HTGE      
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK    K +L  H   HTG +P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                  G+KP  C  CGK    + SLA H  TH+G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+++   + L +H + H+GE     
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.3 bits (95), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+++   +    H   HTG+     
Sbjct: 1   GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK   D  S   H   HTG +P    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C++CGK    ++SL+ H   H+G KP    
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C +CG+++S    L VH   H+G+     
Sbjct: 1   GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++  G K + C++CG+ +S +++L+ H   HTGE     
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+K   C +CGK       L  H   HTG KP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C+ CG+S+  A+ L  H   H+GE     
Sbjct: 1   GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK       L  H   H+G KP    
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK       LA H   HTG KP    
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KP  C  CG+S+S ++ L  H   HTGE     
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             +G KP+ C  C  ++S    L  H   HT ++  + 
Sbjct: 4   GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG+KP+ C  CG+++S  + L  H   HTGE     
Sbjct: 1   GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G KP +C  CGK      SL  H   HTG KP    
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
            +  ++ +G KP  C+ CG+++    +L  H+  HTGE      
Sbjct: 1   GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK       LA+H+  HTG KP    
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 20/41 (48%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG  P+ C  CG+ +S    L  H   H+G++  + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+ P  C  CGK+   K  L +H  TH+G      
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG++++  A L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK    K +L  H   HTG KP   
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KPH C  CG+S+S  + L VH   HTGE     
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK       L  H   HTG  P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG  P+ C  CG+++S    L  H   H GE     
Sbjct: 1   GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                  G+ P  C  CGK    K  L +H  TH G KP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                  G++   C+ CGK  I K +L+ H   H G KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 19/41 (46%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG + + C  CG+++   + L +H   H GE     
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 13/43 (30%), Positives = 26/43 (60%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C++CG+++  +++L  H S H+GE     
Sbjct: 1   GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C +CGK       L  H + H+G +P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C+ CG+++S   +L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK       L  H   HTG KP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
            +  ++ TG K + C  CG+ +S  + L  H   HTGE      
Sbjct: 1   GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+K   C  CGK+      L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/43 (25%), Positives = 20/43 (46%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP+ C  CG+++    +L  H   HTG      
Sbjct: 1   GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C+ CGK       L  H   HTG +P    
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
            +  ++ TG KP+ C  CG+ +   ++L  H   HTGE      
Sbjct: 1   GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK+      LA H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G KP  C  CGK       LA H   HTG KP    
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KP+ C  CG+++S  + L  H   HTGE     
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
           +  +G  P+ C  CG++++    L  H   H GE+  + 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)

Query: 247 QREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                G+ P  C+ CGK    K  L +H  TH G      
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
              +  G  P+ C  CG+S++    L VH    +  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS 37

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 39.2 bits (92), Expect = 5e-05
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPH 283
                 G+ P +C  CGK    + SLA H  + +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+++   + L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK      +L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 12/43 (27%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ +G KP+ C  CG+ ++  ++L  H   HTGE     
Sbjct: 1   GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK+      L NH   HTG KP   
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK  I    L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
             ++ TG KP+ CE CG+++   + L+ H   HTGE     
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C  CGK       LA H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
           +  ++ TG KP+ C  CG+++S  + L  H   HTGE     
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP  C  CG+SY+   +L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCC 285
                 G+KP  C  CGK    +  L  H   HTG KP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 245 HHQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                  G+KP  C  CGK+      LA H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+ ++  ++L  H   HTG      
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
           +  ++ TG KP+ C  CG+ +   +YL  H   HTGE      
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK+      L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC 316
           +    K   CEICG+ +    +L  H   H+GE  ++    
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHM-NTHTGLKPHCC 285
                 GKKP  C  CGK  I   SL  H    HTG KP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHM-SCHTGETSHTC 313
            +  ++ TG KP+ C  CG+++     L  H    HTGE     
Sbjct: 1   GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 8/67 (11%)

Query: 246 HQREHQGKKPV-CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSC 304
            Q+ H G +   C+ CG +           +T +  K   CE C +     A L      
Sbjct: 9   RQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGN 61

Query: 305 HTGETSH 311
            +G+ + 
Sbjct: 62  ESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 7/65 (10%)

Query: 269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL 328
           S       H G +   C  CG  +          S  +   +  C  C +   Q ++   
Sbjct: 5   SSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNK 57

Query: 329 HYKTH 333
                
Sbjct: 58  DEGNE 62

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 175 LRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGK 234
              +    K+   Y+C YC          T H+ + H    L          ++C  C  
Sbjct: 6   HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNS-------SYVCVECNF 58

Query: 235 SYVRKGALTEHHQREHQG 252
              R  AL+EH+ + H G
Sbjct: 59  LTKRYDALSEHNLKYHPG 76

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK+      LANH   HTG+KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH 314
             ++ TG KP+ C  CG+ ++  ++L  H   HTG       
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+ ++  ++L  H   HTGE     
Sbjct: 1   GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 GKKP  C  CGK+      LA H   HTG KP    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK+      L  H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
           +  ++ TG KP+ C  CG+ ++  ++L  H   HTGE     
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC 313
            +  ++ TG KP+ C  CG+ ++  ++L  H   HTGE     
Sbjct: 1   GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 246 HQREHQGKKP-VCTICGKMLIDKRSLANHMNTHTGLKPHCCE 286
                 G+KP  C  CGK+      LA H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 127 EKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGK 186
           +++YQC  C ++  +      H R           C +CS  F   EL + H +     K
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHES-KCEYK 68

Query: 187 NYQCYYCRKTYCHKPNLTNHIQNVH 211
              C  C +T+    ++  H   VH
Sbjct: 69  KLTCLECMRTFKSSFSIWRHQVEVH 93

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 32/91 (35%), Gaps = 12/91 (13%)

Query: 63  KLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDSKAKIQEHIIS 122
           ++Y+C LCN    +      H R            +   VC YC+  F S    QEH   
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERL----------CRNAAVCPYCSLRFFSPELKQEH--E 62

Query: 123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKH 153
           S    K   C  C    ++    + H  + H
Sbjct: 63  SKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH 305
                TG+KP  C  C RS+S + +L +H   H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.2 bits (93), Expect = 8e-04
 Identities = 8/79 (10%), Positives = 22/79 (27%), Gaps = 7/79 (8%)

Query: 239 KGALTEHHQREHQGKKPV-------CTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRS 291
              L+     +++G                 ++    +      T +    + C +C   
Sbjct: 130 ANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAV 189

Query: 292 YSTAAYLKVHMSCHTGETS 310
             +   L  H++ H    +
Sbjct: 190 LFSPLDLDAHVASHGLHGN 208

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.71
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.5
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.49
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.46
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.39
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.37
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.3
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.27
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.22
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.22
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.22
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.21
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.03
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.02
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.02
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.02
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.02
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.0
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.0
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.99
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.95
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.92
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.91
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.88
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.87
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.83
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.82
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.81
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.8
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.8
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.8
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.8
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.8
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.79
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.78
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.75
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.73
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.69
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.69
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.69
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.67
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.63
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.62
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.61
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.6
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.6
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.57
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.57
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.56
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.54
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.46
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.44
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.43
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.39
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.38
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.36
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.3
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.3
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.28
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.26
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.26
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.24
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.22
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.19
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.18
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.17
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.17
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.17
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.16
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.15
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.13
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.13
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.12
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.11
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.11
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.09
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.08
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.08
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.07
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.06
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.31
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.31
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.03
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.02
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.25
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.24
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.96
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.17
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.93
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.14
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.82
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.72
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.71
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.62
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.96
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.82
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.62
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.52
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	96.48
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.17
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.88
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.83
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.66
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.66
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	90.95
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	89.28
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	88.32
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.2
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.3
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	84.43
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.38
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	84.15
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	82.72
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	81.76
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	81.73
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.36
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	81.33
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.07

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.8e-37  Score=246.51  Aligned_cols=168  Identities=33%  Similarity=0.634  Sum_probs=104.9

Q ss_pred             cccccccccCCHHHHHHHHHHhCCCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchh
Q psy4574         161 SCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKG  240 (343)
Q Consensus       161 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  240 (343)
                      .|+.|+..|.+...|..|++.|.++++|.|+.|++.|.+...|..|+           ..+.+.++|.|+.|++.|.+..
T Consensus        23 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~C~~~f~~~~   91 (190)
T 2i13_A           23 ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ-----------RTHTGEKPYKCPECGKSFSQRA   91 (190)
T ss_dssp             --------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHH-----------HHHHCCCCEECTTTCCEESCHH
T ss_pred             cCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHH-----------HhcCCCCCccCcccCCccCCHH
Confidence            44444444444444444444444445555555555555555555554           2333445556666666666666


Q ss_pred             HHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccc
Q psy4574         241 ALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKF  320 (343)
Q Consensus       241 ~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  320 (343)
                      .|..|+..+++..++.|++|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|
T Consensus        92 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  171 (190)
T 2i13_A           92 NLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF  171 (190)
T ss_dssp             HHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             HHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCcc
Confidence            66666544445556677777777777777777778888888888888888888888888888888888888888888888


Q ss_pred             cCchhHHhHHhhcCCCCCC
Q psy4574         321 RQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       321 ~~~~~l~~H~~~~h~~~~~  339 (343)
                      .+...|..|+++|+++.|+
T Consensus       172 ~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          172 SRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             SSHHHHHHHHTTC------
T ss_pred             CCHHHHHHHHHhcCCCCCC
Confidence            8888888888888888764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5e-36  Score=239.98  Aligned_cols=185  Identities=31%  Similarity=0.557  Sum_probs=138.6

Q ss_pred             hHHHHHHHHhcCCCCCcccCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCcccccc
Q psy4574         113 KAKIQEHIISSHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYY  192 (343)
Q Consensus       113 ~~~l~~H~~~~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  192 (343)
                      ...|..|+ ..|.++++|.|+.|++.|.+...|..|++.+++..+  |.|+.|+..|.+...|..|++.|.++++|.|+.
T Consensus         6 ~~~l~~h~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~--~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   82 (190)
T 2i13_A            6 SSSSVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP--YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE   82 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC---CC--EECTTTCCEESSHHHHHHHHHHHHCCCCEECTT
T ss_pred             hccchhhh-hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCC--ccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc
Confidence            35677777 678888899999999999999999999988877665  599999999999999999999999999999999


Q ss_pred             cccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHH
Q psy4574         193 CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLAN  272 (343)
Q Consensus       193 C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~  272 (343)
                      |++.|.+...|..|+           ..+.+.++|.|+.|++.|.+...|..|+..+++..+|.|++|++.|.+...|..
T Consensus        83 C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           83 CGKSFSQRANLRAHQ-----------RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             TCCEESCHHHHHHHH-----------HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             cCCccCCHHHHHHHH-----------HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHH
Confidence            999999999999998           555667889999999999999999999866666777899999999999999999


Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      |++.|+++++|.|.+|++.|.....|..|+++|.+++||
T Consensus       152 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             HHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999999999999999998875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=4e-31  Score=211.45  Aligned_cols=164  Identities=28%  Similarity=0.483  Sum_probs=143.3

Q ss_pred             Cccc--cccccccCCHHHHHHHHHHhCCCCcccc--cccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccC--cc
Q psy4574         159 NLSC--EFCSRIFTKKELLRSHLAVHKIGKNYQC--YYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICD--VC  232 (343)
Q Consensus       159 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~--~C  232 (343)
                      .|.|  +.|+..|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+           ..+.+.++|.|+  .|
T Consensus        12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A           12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-----------LTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHH-----------TTTTTCCCEECCSSSC
T ss_pred             ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHH-----------HHccCCCceeCCCCCC
Confidence            3678  6788888888888888888888888888  77888888888888888           455567888998  89


Q ss_pred             CccccchhHHHHHHhhhcC--CCCccc--ccccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhcC
Q psy4574         233 GKSYVRKGALTEHHQREHQ--GKKPVC--TICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       233 ~~~f~~~~~l~~H~~~~h~--~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  306 (343)
                      ++.|.+...|..|+...|.  ..++.|  +.|++.|.+...|..|+++|++++||.|++  |++.|.....|..|+++|.
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~  160 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA  160 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSC
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhC
Confidence            9999999999999766673  456799  889999999999999999999999999988  9999999999999999998


Q ss_pred             CCCcccCCC---CcccccCchhHHhHHhhcCCC
Q psy4574         307 GETSHTCHL---CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       307 ~~~~~~C~~---C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +   |.|+.   |++.|.+...|..|+++||++
T Consensus       161 ~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          161 G---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             S---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             C---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            8   89999   999999999999999999975

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.3e-28  Score=196.86  Aligned_cols=167  Identities=24%  Similarity=0.427  Sum_probs=118.0

Q ss_pred             cccccccc--CcccccccChhHHHHHHHHhcCCCCcccc--cccccccCChHHHHHHhhhhcCCcccccCCCCccccc--
Q psy4574          31 DVWDEERC--RSCGLLSGSITQTYIHYLECKNRGKLYEC--SLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCH--  104 (343)
Q Consensus        31 ~~~~~~~C--~~C~~~~~~~~~l~~H~~~~h~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~--  104 (343)
                      .+.++|.|  +.|++.|.+...|..| +..|.++++|.|  +.|++.|.+...|..|++.|++..+.        .|.  
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~--------~C~~~   78 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF--------TCDSD   78 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHH-HHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCE--------ECCSS
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHH-HHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCce--------eCCCC
Confidence            34567777  5788888887888888 566777777777  67777777777777777777665544        677  


Q ss_pred             cccccccChHHHHHHHHhcC-CCCCcccC--CcCcccccchhHHHhHHhhccCCCCCCccccc--cccccCCHHHHHHHH
Q psy4574         105 YCNRTFDSKAKIQEHIISSH-MHEKLYQC--DFCGSQQRTKCRFYYHLRDKHLSKPANLSCEF--CSRIFTKKELLRSHL  179 (343)
Q Consensus       105 ~C~~~f~~~~~l~~H~~~~H-~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~  179 (343)
                      .|++.|.+...|..|+...| .++.+|.|  +.|++.|.+...|..|++.++++.+  |.|+.  |++.|.+...|..|+
T Consensus        79 ~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~--~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A           79 GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP--YECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             SCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCS--SBCCSSSCCCBCSSHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCC--ccCCCCCCCchhcCHHHHHHHH
Confidence            67777777777777776666 35667777  6677777777777777777666555  47766  777777777777777


Q ss_pred             HHhCCCCcccccc---cccccCCchHHHhHHHhhc
Q psy4574         180 AVHKIGKNYQCYY---CRKTYCHKPNLTNHIQNVH  211 (343)
Q Consensus       180 ~~h~~~~~~~C~~---C~~~~~~~~~l~~H~~~~h  211 (343)
                      +.|.+   |.|+.   |++.|.+...|..|+..++
T Consensus       157 ~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          157 KVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             TSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             HHhCC---CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            77665   66666   7777777777777765544

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=5.3e-27  Score=181.19  Aligned_cols=107  Identities=31%  Similarity=0.544  Sum_probs=95.4

Q ss_pred             cCccCccccchhHHHHHHhhhcCCCCccccc--ccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHh-h
Q psy4574         229 CDVCGKSYVRKGALTEHHQREHQGKKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHM-S  303 (343)
Q Consensus       229 C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~  303 (343)
                      |..|++.|.+...|..|+..+++..++.|++  |++.|.+...|..|++.|+++++|.|.+  |++.|.....|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            4445688888888888876666667789985  9999999999999999999999999998  999999999999998 8


Q ss_pred             hcCCCCcccCCC--CcccccCchhHHhHHhhcCC
Q psy4574         304 CHTGETSHTCHL--CPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       304 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +|.++++|.|++  |++.|.+.+.|..|++++||
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            899999999988  99999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=1.1e-24  Score=168.04  Aligned_cols=103  Identities=26%  Similarity=0.503  Sum_probs=71.4

Q ss_pred             ccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCc--cCccccchhHHHHHHhhhcCCCCccccc--ccccCCChHH
Q psy4574         194 RKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPVCTI--CGKMLIDKRS  269 (343)
Q Consensus       194 ~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~  269 (343)
                      ++.|.+...|..|+           ..+.+.++|.|+.  |++.|.+...|..|+..+++..+|.|++  |++.|.+...
T Consensus        46 ~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  114 (155)
T 2gli_A           46 LRPFKAQYMLVVHM-----------RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASD  114 (155)
T ss_dssp             TCCCSSHHHHHHHT-----------HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSST
T ss_pred             hhhhhhHHHHHHHH-----------HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHH
Confidence            35566666666665           3344455666653  6666666666666664433445567776  7777777777


Q ss_pred             HHHHH-HhhcCCCceeCCc--cCcccCCHHHHHHHhhhcCC
Q psy4574         270 LANHM-NTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       270 l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |..|+ +.|.++++|.|.+  |++.|.....|..|+++|+|
T Consensus       115 L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          115 RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             THHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            77777 6788888888888  88888888888888888764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=5.4e-24  Score=157.79  Aligned_cols=117  Identities=26%  Similarity=0.499  Sum_probs=104.9

Q ss_pred             hcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHh---hcCCCceeCCccCcccCCHHHH
Q psy4574         222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNT---HTGLKPHCCEICGRSYSTAAYL  298 (343)
Q Consensus       222 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l  298 (343)
                      .+.++|.|+.|++.|.+...|..|+..++...++.|++|++.|.+...|..|+..   +.++++|.|.+|++.|.....|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4567899999999999999999998666666778999999999999999999885   5788999999999999999999


Q ss_pred             HHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         299 KVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       299 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      ..|+++|.++++|.|++|++.|...+.|..|++..|++..
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999998887754

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.90  E-value=9.1e-24  Score=156.52  Aligned_cols=116  Identities=31%  Similarity=0.602  Sum_probs=102.3

Q ss_pred             CCccccC--ccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHH
Q psy4574         224 KREFICD--VCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLK  299 (343)
Q Consensus       224 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  299 (343)
                      .++|.|+  .|++.|.+...|..|+ ..|...++.|++|++.|.+...|..|++.|.++++|.|.+  |++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4689999  8999999999999997 6677778899999999999999999999999999999986  999999999999


Q ss_pred             HHhhhcCCCCcccCC--CCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCH--LCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|+  .|++.|.+.+.|..|+++|+++.+++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999999999996  49999999999999999999988753

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=1.6e-23  Score=154.10  Aligned_cols=112  Identities=32%  Similarity=0.635  Sum_probs=102.2

Q ss_pred             hcCCccccCc--cCccccchhHHHHHHhhhcCCCCcccc--cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHH
Q psy4574         222 ILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPVCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAY  297 (343)
Q Consensus       222 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  297 (343)
                      .++++|.|+.  |++.|.+...|..|+..+++..++.|+  .|++.|.+...|..|++.|+++++|.|.+|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3568899987  999999999999998665666777998  799999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCCcccC--CCCcccccCchhHHhHHhhc
Q psy4574         298 LKVHMSCHTGETSHTC--HLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       298 l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  333 (343)
                      |..|+++|.++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999999  89999999999999999875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=2e-23  Score=160.97  Aligned_cols=119  Identities=29%  Similarity=0.540  Sum_probs=108.3

Q ss_pred             hcCCccccCccCccccchhHHHHHHhhhcCCCC---------cccccccccCCChHHHHHHHHhhcCCCceeCCc--cCc
Q psy4574         222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKK---------PVCTICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGR  290 (343)
Q Consensus       222 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~---------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~  290 (343)
                      .....|.|+.|++.|.+...|..|+...|.+..         +.|++|++.|.+...|..|++.|.++++|.|.+  |++
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            445778899999999999999999855576654         689999999999999999999999999999998  999


Q ss_pred             ccCCHHHHHHHhhhcCCCCcccCCC--CcccccCchhHHhHHhhcCCCCCCC
Q psy4574         291 SYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       291 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|.....|..|+++|.++++|.|++  |++.|.....|..|+++|+++.|++
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~  152 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP  152 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999997  9999999999999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=1.2e-21  Score=144.98  Aligned_cols=114  Identities=31%  Similarity=0.562  Sum_probs=84.0

Q ss_pred             CCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhh---cCCCCcccccc
Q psy4574         184 IGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQRE---HQGKKPVCTIC  260 (343)
Q Consensus       184 ~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~---h~~~~~~C~~C  260 (343)
                      ++.+|.|+.|++.|.+...|..|+           ..+.+.++|.|+.|++.|.+...|..|+...   ....++.|++|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C   72 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHN-----------RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVC   72 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHH-----------HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSS
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHH-----------HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCC
Confidence            455666666666666666666666           3344456667777777777777777776432   23455688888


Q ss_pred             cccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhh-hcCCC
Q psy4574         261 GKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGE  308 (343)
Q Consensus       261 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  308 (343)
                      ++.|.+...|..|++.|++++||.|.+|++.|.....|..|++ .|.++
T Consensus        73 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           73 QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            8888888999999999999999999999999999999999986 46554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=3.4e-22  Score=148.60  Aligned_cols=106  Identities=24%  Similarity=0.365  Sum_probs=92.2

Q ss_pred             HhhhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHH
Q psy4574         219 RTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYL  298 (343)
Q Consensus       219 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  298 (343)
                      ..+.|+++|.|+.|++.|.+...|..|+..+.+.++|.|++|++.|.....|..|+++|++++||.|.+|++.|.....|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            45678899999999999999999999984444556679999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCC------CcccCCCCcccccCch
Q psy4574         299 KVHMSCHTGE------TSHTCHLCPQKFRQRS  324 (343)
Q Consensus       299 ~~H~~~h~~~------~~~~C~~C~~~f~~~~  324 (343)
                      ..|+++|+++      ++|+|..|++.|....
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            9999988765      4589999998886543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=1.5e-21  Score=143.35  Aligned_cols=112  Identities=28%  Similarity=0.579  Sum_probs=95.6

Q ss_pred             CCCCcccccc--cccccCCchHHHhHHHhhccchhHHHHhhhcCCccccC--ccCccccchhHHHHHHhhhcCCCCcccc
Q psy4574         183 KIGKNYQCYY--CRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICD--VCGKSYVRKGALTEHHQREHQGKKPVCT  258 (343)
Q Consensus       183 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~  258 (343)
                      .++++|.|++  |++.|.+...|..|+           ..+.+.++|.|+  .|++.|.+...|..|+..+++..++.|+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~-----------~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   70 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-----------RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK   70 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHH-----------HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHH-----------HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC
Confidence            3567888886  888888888888887           455566788888  6888888888888888666666777999


Q ss_pred             cccccCCChHHHHHHHHhhcCCCceeC--CccCcccCCHHHHHHHhhhc
Q psy4574         259 ICGKMLIDKRSLANHMNTHTGLKPHCC--EICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       259 ~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +|++.|.....|..|++.|+++++|.|  ++|++.|.....|..|+++|
T Consensus        71 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           71 TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             TTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999999  88999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=1.5e-21  Score=150.44  Aligned_cols=128  Identities=27%  Similarity=0.413  Sum_probs=95.2

Q ss_pred             CCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCccccc--ccc
Q psy4574         185 GKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTI--CGK  262 (343)
Q Consensus       185 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~  262 (343)
                      +..|.|..|++.|.+...|..|+...|.....  ........|.|+.|++.|.+...|..|+..++..+++.|.+  |++
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~--~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  100 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE--QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK  100 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT--CSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCC
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcc--cCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCC
Confidence            34555555666666665566665443321100  00001123788899999988889999986555667779987  999


Q ss_pred             cCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         263 MLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       263 ~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      .|.....|..|++.|+++++|.|.+  |++.|.....|..|+++|.++++|.|.
T Consensus       101 ~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          101 IFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             EESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999999997  999999999999999999999999885

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1.3e-21  Score=144.87  Aligned_cols=116  Identities=27%  Similarity=0.546  Sum_probs=92.2

Q ss_pred             CCccccc--ccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCccccchhHHHHHHhhhcCCCCccccc--c
Q psy4574         185 GKNYQCY--YCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTI--C  260 (343)
Q Consensus       185 ~~~~~C~--~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C  260 (343)
                      +++|.|+  .|++.|.+...|..|+           ..+ +.++|.|+.|++.|.+...|..|+..+++..++.|++  |
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-----------~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   70 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-----------HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGC   70 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-----------GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTC
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-----------HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCC
Confidence            5678888  7888888888888887           333 5578889999999999999999975555556679975  9


Q ss_pred             cccCCChHHHHHHHHhhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCCccc
Q psy4574         261 GKMLIDKRSLANHMNTHTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETSHT  312 (343)
Q Consensus       261 ~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  312 (343)
                      ++.|.+...|..|++.|+++++|.|+  .|++.|.....|..|+++|.++++++
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           71 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             cCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            99999999999999999999999996  49999999999999999999887653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=6.7e-22  Score=147.02  Aligned_cols=93  Identities=26%  Similarity=0.405  Sum_probs=87.4

Q ss_pred             hhcCC-CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhH
Q psy4574         248 REHQG-KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSY  326 (343)
Q Consensus       248 ~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  326 (343)
                      ..|.| .+|.|++|++.|.....|..|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++||+.|...+.|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            44554 45699999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHhhcCCCCCCC
Q psy4574         327 TLHYKTHHPGVIPP  340 (343)
Q Consensus       327 ~~H~~~~h~~~~~~  340 (343)
                      ..|++++|++.|+.
T Consensus        95 ~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           95 SSHIKSVHSQDPSG  108 (133)
T ss_dssp             HHHHHHHTCCCTTS
T ss_pred             HHHhHHhcCCCCCC
Confidence            99999999998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=4.5e-20  Score=129.95  Aligned_cols=91  Identities=31%  Similarity=0.636  Sum_probs=83.0

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHH
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHY  330 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  330 (343)
                      +..+|.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCC
Q psy4574         331 KTHHPGVIPPK  341 (343)
Q Consensus       331 ~~~h~~~~~~~  341 (343)
                      ++|+++.+++.
T Consensus        85 ~~h~~~~~p~~   95 (96)
T 2dmd_A           85 RSHTGDSGPSS   95 (96)
T ss_dssp             TTCCSCCCCCC
T ss_pred             HHhcCCCCCCC
Confidence            99999987764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=1.3e-19  Score=130.09  Aligned_cols=90  Identities=27%  Similarity=0.547  Sum_probs=81.5

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHh
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  331 (343)
                      ..++.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            45568999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCC
Q psy4574         332 THHPGVIPPK  341 (343)
Q Consensus       332 ~~h~~~~~~~  341 (343)
                      +|+++.|+..
T Consensus        95 ~H~~~~~~~~  104 (106)
T 2ee8_A           95 LHMQTSSPTA  104 (106)
T ss_dssp             HTTSCCCCCC
T ss_pred             HhCCCCCCcC
Confidence            9999988764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=1.2e-19  Score=123.83  Aligned_cols=82  Identities=32%  Similarity=0.675  Sum_probs=74.5

Q ss_pred             CcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhc
Q psy4574         254 KPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       254 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      +|.|++|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|+.|++.|.+.+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CC
Q psy4574         334 HP  335 (343)
Q Consensus       334 h~  335 (343)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=2.4e-19  Score=124.61  Aligned_cols=85  Identities=33%  Similarity=0.654  Sum_probs=73.4

Q ss_pred             CCcccc--cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHH
Q psy4574         253 KKPVCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHY  330 (343)
Q Consensus       253 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  330 (343)
                      ++|.|+  .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            456887  588888888888888888888889999999999999999999999999889999999999999999999999


Q ss_pred             hhcCCCC
Q psy4574         331 KTHHPGV  337 (343)
Q Consensus       331 ~~~h~~~  337 (343)
                      ++|+++.
T Consensus        83 ~~H~~~k   89 (90)
T 1a1h_A           83 KIHLRQK   89 (90)
T ss_dssp             GGGGC--
T ss_pred             HHhcccC
Confidence            9888764

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=6e-19  Score=123.89  Aligned_cols=88  Identities=28%  Similarity=0.592  Sum_probs=77.2

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC--CcccCCCCcccccCchhHHh
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE--TSHTCHLCPQKFRQRSSYTL  328 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  328 (343)
                      +..++.|.+|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|.++  ++|.|++|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            3456688888888888888999988888899999999999999999999999999887  89999999999999999999


Q ss_pred             HHhhcCCCCC
Q psy4574         329 HYKTHHPGVI  338 (343)
Q Consensus       329 H~~~~h~~~~  338 (343)
                      |++..|++.+
T Consensus        84 H~~~~H~~~~   93 (95)
T 2yt9_A           84 HIKQVHSGPS   93 (95)
T ss_dssp             HHHHTSCCCS
T ss_pred             HHHHhcCCCC
Confidence            9987777654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=2.8e-18  Score=123.06  Aligned_cols=94  Identities=29%  Similarity=0.587  Sum_probs=85.1

Q ss_pred             hhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHH
Q psy4574         221 AILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKV  300 (343)
Q Consensus       221 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  300 (343)
                      ...+++|.|+.|++.|.+...|..|+..++...+|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            44567899999999999999999998666666778999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCcccCC
Q psy4574         301 HMSCHTGETSHTCH  314 (343)
Q Consensus       301 H~~~h~~~~~~~C~  314 (343)
                      |+++|.++++|.++
T Consensus        92 H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           92 HKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHTTSCCCCCCC
T ss_pred             HHHHhCCCCCCcCC
Confidence            99999999988653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3.2e-18  Score=120.38  Aligned_cols=91  Identities=30%  Similarity=0.561  Sum_probs=82.5

Q ss_pred             hhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHH
Q psy4574         221 AILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKV  300 (343)
Q Consensus       221 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  300 (343)
                      ..++++|.|+.|++.|.+...|..|+..++...++.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            35678899999999999999999998655556778999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCcc
Q psy4574         301 HMSCHTGETSH  311 (343)
Q Consensus       301 H~~~h~~~~~~  311 (343)
                      |+++|.+++..
T Consensus        83 H~~~h~~~~~p   93 (96)
T 2dmd_A           83 HLRSHTGDSGP   93 (96)
T ss_dssp             HHTTCCSCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999988643

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1.8e-19  Score=131.29  Aligned_cols=100  Identities=14%  Similarity=0.084  Sum_probs=78.9

Q ss_pred             hHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHh--hcCCCcee-CCccCccc--CCHHHHHHHhhhcCCCCcccCC
Q psy4574         240 GALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNT--HTGLKPHC-CEICGRSY--STAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       240 ~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      ..|..|+..+.+.++|.|.+|++.|.....|..|++.  |.+.+++. |.+|++.|  .....|..|+++|.++++|.|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4456676333344556888888888888888888887  66666654 99999888  8888899999999999999999


Q ss_pred             CCcccccCchhHHhHHhhcCCCCCC
Q psy4574         315 LCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       315 ~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      +|++.|...+.|..|++++|.....
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CCCCccCCHHHHHHHHHHhCCcccC
Confidence            9999999999999999988876544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=6.6e-18  Score=117.22  Aligned_cols=86  Identities=31%  Similarity=0.657  Sum_probs=76.5

Q ss_pred             CCccccC--ccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHH
Q psy4574         224 KREFICD--VCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH  301 (343)
Q Consensus       224 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  301 (343)
                      +++|.|+  .|++.|.+...|..|+..++...++.|+.|++.|.+...|..|++.|+++++|.|.+|++.|.....|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5789998  59999999999999986666667789999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCC
Q psy4574         302 MSCHTGET  309 (343)
Q Consensus       302 ~~~h~~~~  309 (343)
                      +++|.+++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            99998875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.7e-18  Score=122.71  Aligned_cols=84  Identities=32%  Similarity=0.652  Sum_probs=69.6

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHh
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  331 (343)
                      .++|.| .|++.|.+...|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT   86 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence            345578 7888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hcCCC
Q psy4574         332 THHPG  336 (343)
Q Consensus       332 ~~h~~  336 (343)
                      ++|++
T Consensus        87 ~~~~~   91 (110)
T 2csh_A           87 SCTKS   91 (110)
T ss_dssp             HHHHH
T ss_pred             Hcccc
Confidence            87754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.72  E-value=7.6e-18  Score=114.70  Aligned_cols=82  Identities=37%  Similarity=0.750  Sum_probs=74.4

Q ss_pred             ccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhc
Q psy4574         226 EFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       226 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +|.|+.|++.|.+...|..|+..+++..++.|+.|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58899999999999999999866666777899999999999999999999999999999999999999999999999988


Q ss_pred             CC
Q psy4574         306 TG  307 (343)
Q Consensus       306 ~~  307 (343)
                      .|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            64

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=4.3e-18  Score=106.96  Aligned_cols=58  Identities=31%  Similarity=0.642  Sum_probs=51.4

Q ss_pred             CCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         279 GLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       279 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .|+||.|.+||++|...+.|..|+++|.++++|.|++||+.|...+.|..|+++|.++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            3688999999999999999999999999999999999999999999999999887764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=1.2e-17  Score=119.94  Aligned_cols=90  Identities=17%  Similarity=0.285  Sum_probs=44.2

Q ss_pred             hhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHH
Q psy4574         221 AILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKV  300 (343)
Q Consensus       221 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  300 (343)
                      +.++++|.|+.|++.|.....|..|+ +.| .+++.|.+|++.|.....|..|+. |.++++|.|.+|++.|.....|..
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~-~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHE-RLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHH-HHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHH-HHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHH
Confidence            34445555555555555555555554 223 133455555555555555555543 444455555555555555555555


Q ss_pred             Hhh-hcCCCCcccC
Q psy4574         301 HMS-CHTGETSHTC  313 (343)
Q Consensus       301 H~~-~h~~~~~~~C  313 (343)
                      |++ .|.++++|.|
T Consensus        88 H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           88 HQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHTSCCCCCCCC
T ss_pred             HHHHHcCCCCCCCC
Confidence            553 4444444443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.2e-17  Score=119.81  Aligned_cols=87  Identities=18%  Similarity=0.317  Sum_probs=74.7

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHH
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHY  330 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  330 (343)
                      ..++|.|.+|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+. |.++++|.|++|++.|.....|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHH
Confidence            3456699999999999999999998884  78999999999999999999985 88889999999999999999999999


Q ss_pred             h-hcCCCCCCC
Q psy4574         331 K-THHPGVIPP  340 (343)
Q Consensus       331 ~-~~h~~~~~~  340 (343)
                      + .|.++.|++
T Consensus        90 ~~~H~~~~~~~  100 (107)
T 1wjp_A           90 VEVHNQNNMAP  100 (107)
T ss_dssp             HHTSCCCCCCC
T ss_pred             HHHcCCCCCCC
Confidence            7 666666665

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=3.5e-17  Score=115.94  Aligned_cols=83  Identities=30%  Similarity=0.604  Sum_probs=71.6

Q ss_pred             CCccccc--ccccCCChHHHHHHHHhhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHh
Q psy4574         253 KKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL  328 (343)
Q Consensus       253 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  328 (343)
                      +.+.|..  |++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHH
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHH
Confidence            4457875  888888888888888888888899996  599999999999999999999999999999999999999999


Q ss_pred             HHhhcCC
Q psy4574         329 HYKTHHP  335 (343)
Q Consensus       329 H~~~~h~  335 (343)
                      |+++|++
T Consensus        94 H~~~H~~  100 (100)
T 2ebt_A           94 HMKRHQN  100 (100)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhCC
Confidence            9988864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=2.2e-17  Score=114.31  Aligned_cols=81  Identities=33%  Similarity=0.681  Sum_probs=67.9

Q ss_pred             CCccccc--ccccCCChHHHHHHHHhhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHh
Q psy4574         253 KKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL  328 (343)
Q Consensus       253 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  328 (343)
                      ..+.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+++|.++++|.|+.|++.|...+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3457877  888888888888888888888888886  588888888888888888888888888888888888888888


Q ss_pred             HHhhc
Q psy4574         329 HYKTH  333 (343)
Q Consensus       329 H~~~~  333 (343)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            88876

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=2.2e-18  Score=125.57  Aligned_cols=97  Identities=22%  Similarity=0.208  Sum_probs=79.7

Q ss_pred             HhhhcCCccccCccCccccchhHHHHHHhh--hcCCCCc-ccccccccC--CChHHHHHHHHhhcCCCceeCCccCcccC
Q psy4574         219 RTAILKREFICDVCGKSYVRKGALTEHHQR--EHQGKKP-VCTICGKML--IDKRSLANHMNTHTGLKPHCCEICGRSYS  293 (343)
Q Consensus       219 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  293 (343)
                      +.+.++++|.|+.|++.|.+...|..|+..  .....++ .|++|++.|  .....|..|++.|.+++||.|.+|++.|.
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~   91 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFE   91 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCS
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccC
Confidence            556677888888888888888888888743  2233334 599999988  88999999999999999999999999999


Q ss_pred             CHHHHHHHhhhcCCCCcccCCC
Q psy4574         294 TAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       294 ~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      ....|..|++.|+.......+.
T Consensus        92 ~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           92 SLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             SHHHHHHHHHHTTTTTCSCCCC
T ss_pred             CHHHHHHHHHHhCCcccCCCCC
Confidence            9999999999988776655543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=6.5e-17  Score=113.34  Aligned_cols=87  Identities=28%  Similarity=0.592  Sum_probs=76.4

Q ss_pred             hcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCC--CceeCCccCcccCCHHHHH
Q psy4574         222 ILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGL--KPHCCEICGRSYSTAAYLK  299 (343)
Q Consensus       222 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  299 (343)
                      .++++|.|+.|++.|.+...|..|+..++...+|.|++|++.|.....|..|++.|+++  ++|.|.+|++.|.....|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45688999999999999999999985555566779999999999999999999999887  8999999999999999999


Q ss_pred             HHhh-hcCCC
Q psy4574         300 VHMS-CHTGE  308 (343)
Q Consensus       300 ~H~~-~h~~~  308 (343)
                      .|++ +|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9985 67664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=4.1e-18  Score=117.63  Aligned_cols=83  Identities=23%  Similarity=0.345  Sum_probs=76.4

Q ss_pred             CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhh
Q psy4574         253 KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      ++|.|++|++.|.....|..|++.|.+++||.|.+|++.|.....|..|+++|++ .+|.|+.|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4678999999999999999999999999999999999999999999999999885 789999999999999999999998


Q ss_pred             cCCC
Q psy4574         333 HHPG  336 (343)
Q Consensus       333 ~h~~  336 (343)
                      .|+-
T Consensus        81 ~h~~   84 (88)
T 1llm_C           81 LKKL   84 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8754

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=1e-16  Score=109.88  Aligned_cols=78  Identities=29%  Similarity=0.496  Sum_probs=72.7

Q ss_pred             Cccc--ccccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhcCCCCcccCCC---CcccccCchhH
Q psy4574         254 KPVC--TICGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHL---CPQKFRQRSSY  326 (343)
Q Consensus       254 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  326 (343)
                      +|.|  +.|++.|.+...|..|++.|.++++|.|.+  |++.|.....|..|+++|.+   |.|+.   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            3578  889999999999999999999999999988  99999999999999999988   99999   99999999999


Q ss_pred             HhHHhhcC
Q psy4574         327 TLHYKTHH  334 (343)
Q Consensus       327 ~~H~~~~h  334 (343)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999887

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.2e-16  Score=115.33  Aligned_cols=87  Identities=29%  Similarity=0.537  Sum_probs=77.3

Q ss_pred             hhhcCCccccCccCccccchhHHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHH
Q psy4574         220 TAILKREFICDVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLK  299 (343)
Q Consensus       220 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  299 (343)
                      .+.++++|.| .|++.|.+...|..|+..++...+|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3567788999 899999999999999866556677899999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCC
Q psy4574         300 VHMSCHTG  307 (343)
Q Consensus       300 ~H~~~h~~  307 (343)
                      .|++.|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99988764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=1.3e-16  Score=100.06  Aligned_cols=58  Identities=26%  Similarity=0.666  Sum_probs=54.3

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      +++|.|.+|++.|.....|..|+++|++++||.|.+||++|...+.|..|+++|.+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            5678999999999999999999999999999999999999999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.64  E-value=3.4e-17  Score=121.76  Aligned_cols=115  Identities=16%  Similarity=0.291  Sum_probs=83.0

Q ss_pred             hhhcCCccccCccCccc--cchhHHHHHHhhhcCCCCcccccccccCC------ChHHHHHHHHhhcCCCceeCCccCcc
Q psy4574         220 TAILKREFICDVCGKSY--VRKGALTEHHQREHQGKKPVCTICGKMLI------DKRSLANHMNTHTGLKPHCCEICGRS  291 (343)
Q Consensus       220 ~~~~~~~~~C~~C~~~f--~~~~~l~~H~~~~h~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~  291 (343)
                      .+.+.++|.|...+...  .....+..+. .....+.+.|++|...|.      ....|..|+ .|++++||.|.+|++.
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~   83 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMP   83 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCE
T ss_pred             hcccccccccccCCeeeeecHHhhhcccc-CChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcc
Confidence            44556667666544332  2122111121 222223345666655554      556666676 6888999999999999


Q ss_pred             cCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         292 YSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       292 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      |.....|..|+++|  +++|.|++|++.|...+.|..|+++||++..
T Consensus        84 f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~v  128 (129)
T 2wbt_A           84 FSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNICV  128 (129)
T ss_dssp             ESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCCC
T ss_pred             cCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCccC
Confidence            99999999999998  8899999999999999999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=7.6e-16  Score=106.44  Aligned_cols=82  Identities=32%  Similarity=0.647  Sum_probs=74.8

Q ss_pred             CCccccCc--cCccccchhHHHHHHhhhcCCCCcccc--cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHH
Q psy4574         224 KREFICDV--CGKSYVRKGALTEHHQREHQGKKPVCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLK  299 (343)
Q Consensus       224 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  299 (343)
                      ..+|.|+.  |++.|.+...|..|+..+++..++.|+  .|++.|.....|..|++.|.++++|.|.+|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999998555556677997  59999999999999999999999999999999999999999


Q ss_pred             HHhhhc
Q psy4574         300 VHMSCH  305 (343)
Q Consensus       300 ~H~~~h  305 (343)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999987

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=7.5e-17  Score=113.52  Aligned_cols=79  Identities=15%  Similarity=0.223  Sum_probs=70.6

Q ss_pred             cCCChHHHHHHHHhhcCCCceeCCccCcccC-CHHHHHHHhhhcCC-CCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         263 MLIDKRSLANHMNTHTGLKPHCCEICGRSYS-TAAYLKVHMSCHTG-ETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       263 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .+.....+..|++.|.++++|.|.+|++.|. ....|..|+++|.+ +++|.|++|++.|.....|..|+++||++.|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3455566778999999999999999999999 99999999999998 899999999999999999999999999998865


Q ss_pred             C
Q psy4574         341 K  341 (343)
Q Consensus       341 ~  341 (343)
                      .
T Consensus        85 ~   85 (98)
T 2gqj_A           85 A   85 (98)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=1.2e-15  Score=107.98  Aligned_cols=87  Identities=32%  Similarity=0.575  Sum_probs=77.8

Q ss_pred             hhcCCccccCc--cCccccchhHHHHHHhhhcCCCCcccc--cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHH
Q psy4574         221 AILKREFICDV--CGKSYVRKGALTEHHQREHQGKKPVCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAA  296 (343)
Q Consensus       221 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  296 (343)
                      ....++|.|+.  |++.|.+...|..|+..++...++.|+  .|++.|.....|..|++.|+++++|.|.+|++.|....
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            34567899996  999999999999998655566777996  69999999999999999999999999999999999999


Q ss_pred             HHHHHhhhcCC
Q psy4574         297 YLKVHMSCHTG  307 (343)
Q Consensus       297 ~l~~H~~~h~~  307 (343)
                      .|..|+++|.+
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=6.9e-16  Score=101.37  Aligned_cols=66  Identities=26%  Similarity=0.477  Sum_probs=61.9

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPK  341 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  341 (343)
                      .|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++||++.|.+.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            467889999999999999999999999999999999999999999999999999999999988763

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=3.4e-16  Score=104.98  Aligned_cols=70  Identities=26%  Similarity=0.507  Sum_probs=63.8

Q ss_pred             HHHHHhhcCCCceeCCccCcccCCHHHHHHHhh-hcCCC-CcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGE-TSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       271 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ..|+++|.+++||.|.+|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++++|++.++.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            457889999999999999999999999999997 67764 89999999999999999999999999987664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.4e-15  Score=101.38  Aligned_cols=70  Identities=24%  Similarity=0.533  Sum_probs=56.3

Q ss_pred             CCCccccc--ccccCCChHHHHHHHH-hhcCCCceeCCc--cCcccCCHHHHHHHhhhcCCCCcccCCCCccccc
Q psy4574         252 GKKPVCTI--CGKMLIDKRSLANHMN-THTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFR  321 (343)
Q Consensus       252 ~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  321 (343)
                      .+++.|..  |++.|.+...|..|++ .|.++++|.|.+  |++.|.....|..|+++|.++++|.|++|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            34556665  8888888888888887 688888888888  8888888888888888888888888888888773

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.57  E-value=2.8e-15  Score=99.59  Aligned_cols=64  Identities=25%  Similarity=0.468  Sum_probs=57.3

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+++.||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4567788999999999999999999999999999999999999999999999999999988875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.4e-15  Score=99.36  Aligned_cols=64  Identities=34%  Similarity=0.625  Sum_probs=59.7

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      ++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            4688999999999999999999999999999999999999999999999999999999988754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.4e-15  Score=103.56  Aligned_cols=76  Identities=18%  Similarity=0.259  Sum_probs=64.5

Q ss_pred             ccCCChHHHHHHHHhhcCCCceeCCccCccc-CCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhH-HhhcCCCCCC
Q psy4574         262 KMLIDKRSLANHMNTHTGLKPHCCEICGRSY-STAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLH-YKTHHPGVIP  339 (343)
Q Consensus       262 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~  339 (343)
                      ..|.....+..|++.+.++++|.|.+|++.| .....|..|+++| ++++|.|.+|++.|...+.|..| +++|. ++|+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~-~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN-SLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTC-CCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcC-CCCC
Confidence            3566777788888888889999999999999 8999999999999 88999999999999999999999 55554 5554

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5.3e-15  Score=99.05  Aligned_cols=63  Identities=30%  Similarity=0.495  Sum_probs=43.3

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      +.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++.||
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~   75 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS   75 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            345566777777777777777777777776666777777777777777777777777666665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=3.4e-15  Score=93.72  Aligned_cols=57  Identities=32%  Similarity=0.723  Sum_probs=48.0

Q ss_pred             CCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         279 GLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       279 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |+++|.|.+|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999999999999999999998884

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=7.4e-15  Score=99.20  Aligned_cols=62  Identities=23%  Similarity=0.526  Sum_probs=53.0

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      .+.+.++|.|++|++.|.....|..|+++|.++++|.|++|++.|...+.|..|++..|++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            35566789999999999999999999999999999999999999999999999987766553

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=3.2e-15  Score=102.54  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=49.7

Q ss_pred             HHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCC----CceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcc
Q psy4574         243 TEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGL----KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQ  318 (343)
Q Consensus       243 ~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  318 (343)
                      ..|+..+...++|.|.+|++.|.....|..|++.+++.    ++|.|.+|++.|.....|..|+++|.+++++.|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            34542222334457777777777777777776655543    56777777777777777777777777777777777765


Q ss_pred             cc
Q psy4574         319 KF  320 (343)
Q Consensus       319 ~f  320 (343)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=5.5e-15  Score=95.79  Aligned_cols=61  Identities=25%  Similarity=0.488  Sum_probs=56.8

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhh-c-CCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSC-H-TGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ++|.+++||.|.+|++.|.....|..|++. | .++++|.|+.|++.|...+.|..|++++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            468889999999999999999999999988 7 588999999999999999999999999987

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=2.6e-15  Score=103.41  Aligned_cols=82  Identities=13%  Similarity=0.232  Sum_probs=67.6

Q ss_pred             ccccccCcccccccChhHHHHHHHHhcCCCCcccccccccccCChHHHHHHhhhhcCCcccccCCCCccccccccccccC
Q psy4574          33 WDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNRTFDS  112 (343)
Q Consensus        33 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~~f~~  112 (343)
                      +++|.|++|++.|.+...|..| +..|.++++|.|++|++.|.....|..|++.+++ .        +|.|..|++.|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H-~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~--------~~~c~~C~~~f~~   70 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTH-IRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-L--------PILEDKVEELLSK   70 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHH-HHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-H--------HHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHH-HHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-C--------cchHHHHHHHHHH
Confidence            3678899999999888888888 5678888888998899999888888888888874 2        2378888888888


Q ss_pred             hHHHHHHHHhcC
Q psy4574         113 KAKIQEHIISSH  124 (343)
Q Consensus       113 ~~~l~~H~~~~H  124 (343)
                      ...|..|+...|
T Consensus        71 ~~~L~~H~~~~h   82 (88)
T 1llm_C           71 NYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHH
Confidence            888888886665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.1e-14  Score=96.08  Aligned_cols=64  Identities=31%  Similarity=0.598  Sum_probs=58.1

Q ss_pred             cCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         250 HQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       250 h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      ...++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3456679999999999999999999999999999999999999999999999999999999987

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.52  E-value=2.2e-14  Score=98.02  Aligned_cols=78  Identities=23%  Similarity=0.414  Sum_probs=66.7

Q ss_pred             cccc--CccCccccchhHHHHHHhhhcCCCCccccc--ccccCCChHHHHHHHHhhcCCCceeCCc---cCcccCCHHHH
Q psy4574         226 EFIC--DVCGKSYVRKGALTEHHQREHQGKKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEI---CGRSYSTAAYL  298 (343)
Q Consensus       226 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  298 (343)
                      ||.|  +.|++.|.+...|..|+..+.+.+++.|+.  |++.|.....|..|++.|++   |.|.+   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5788  889999999999999985555566679988  99999999999999998887   99999   99999999999


Q ss_pred             HHHhhhcC
Q psy4574         299 KVHMSCHT  306 (343)
Q Consensus       299 ~~H~~~h~  306 (343)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99988764

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.4e-14  Score=99.34  Aligned_cols=70  Identities=21%  Similarity=0.410  Sum_probs=45.0

Q ss_pred             HHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC----CcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE----TSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       271 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ..|+++|.++++|.|.+|++.|.....|..|++.|++.    ++|.|++|++.|.....|..|+++|+++.++.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~   77 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE   77 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcc
Confidence            34566666666666666666666666666666555443    56666666666666666666666666665543

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=1.3e-14  Score=97.38  Aligned_cols=64  Identities=27%  Similarity=0.521  Sum_probs=57.3

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCC---CCcccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTG---ETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      .|.++++|.|.+|++.|.....|..|+++|.+   +++|.|++|++.|...+.|..|++.+|.+..+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            36788999999999999999999999999986   78999999999999999999999887777654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=2.4e-14  Score=89.76  Aligned_cols=56  Identities=27%  Similarity=0.504  Sum_probs=47.2

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      ||.|.+|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888888888888888888888888888888888888888888888888887764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.6e-14  Score=95.49  Aligned_cols=72  Identities=29%  Similarity=0.555  Sum_probs=63.3

Q ss_pred             hcCCccccCc--cCccccchhHHHHHHhhhc-CCCCccccc--ccccCCChHHHHHHHHhhcCCCceeCCccCcccC
Q psy4574         222 ILKREFICDV--CGKSYVRKGALTEHHQREH-QGKKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYS  293 (343)
Q Consensus       222 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  293 (343)
                      .+.++|.|+.  |++.|.+...|..|+...| ..++|.|++  |++.|.....|..|+++|++++||.|.+|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567899987  9999999999999985355 456679998  9999999999999999999999999999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=1.1e-14  Score=108.15  Aligned_cols=115  Identities=13%  Similarity=0.139  Sum_probs=86.3

Q ss_pred             HhCCCCcccccccccccCCchHHHhHHHhhccchhHHHHhhhcCCccccCccCcccc------chhHHHHHHhhhcCCCC
Q psy4574         181 VHKIGKNYQCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFICDVCGKSYV------RKGALTEHHQREHQGKK  254 (343)
Q Consensus       181 ~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~  254 (343)
                      .+.+.++|.|...+.....  .+..+...+        .....++.+.|+.|...|.      ....|..|+ .+++.++
T Consensus         6 ~~~~~k~~~~~~k~~~~~~--s~ee~~~~~--------~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~   74 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHV--TLEELKRYH--------QLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQ   74 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEEC--CHHHHHHHT--------TSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCS
T ss_pred             hcccccccccccCCeeeee--cHHhhhccc--------cCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCC
Confidence            3567788888776644322  222232111        1222345677888776665      566777776 7777888


Q ss_pred             cccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         255 PVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       255 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      |.|++|++.|.....|..|+++|  ++||.|.+|++.|.....|..|+++|++.
T Consensus        75 ~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           75 FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             eECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            89999999999999999999998  79999999999999999999999999876

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.1e-13  Score=96.46  Aligned_cols=80  Identities=19%  Similarity=0.261  Sum_probs=66.4

Q ss_pred             CccccchhHHHHHHhhhcCCCCcccccccccC-CChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHH-hhhcCCCCc
Q psy4574         233 GKSYVRKGALTEHHQREHQGKKPVCTICGKML-IDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVH-MSCHTGETS  310 (343)
Q Consensus       233 ~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  310 (343)
                      ...|.....+..|.......++|.|+.|++.| .....|..|++.| ++++|.|.+|++.|.....|..| +.+|.++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34566777788887666667777999999999 8999999999999 99999999999999999999999 888877655


Q ss_pred             ccC
Q psy4574         311 HTC  313 (343)
Q Consensus       311 ~~C  313 (343)
                      |.+
T Consensus        92 ~~~   94 (96)
T 2ctd_A           92 GPS   94 (96)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=8.4e-14  Score=88.24  Aligned_cols=57  Identities=32%  Similarity=0.651  Sum_probs=48.9

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +||.|.+|++.|.....|..|+++|.++++|.|++|++.|...+.|..|++..|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            578999999999999999999999999999999999999999999999986555443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=1.1e-13  Score=91.75  Aligned_cols=61  Identities=38%  Similarity=0.631  Sum_probs=51.8

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      +.++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3456688888888888888888888888888899999999999999999999888888775

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=4.4e-14  Score=98.96  Aligned_cols=65  Identities=18%  Similarity=0.250  Sum_probs=40.3

Q ss_pred             CCcccccccccCCChHHHHHHHH-hh---cCCCceeCCccCcccCCHHHHHHH-hhhcCCCCcccCCCCc
Q psy4574         253 KKPVCTICGKMLIDKRSLANHMN-TH---TGLKPHCCEICGRSYSTAAYLKVH-MSCHTGETSHTCHLCP  317 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  317 (343)
                      ++|.|..|++.|.....|..|++ .|   .+++||.|.+||+.|.....|..| +++|.++++|.|.++.
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            34456666666666666666654 35   345666666666666666666666 5666666666666543

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=8.9e-14  Score=97.39  Aligned_cols=63  Identities=16%  Similarity=0.147  Sum_probs=58.1

Q ss_pred             cCCCceeCCccCcccCCHHHHHHHhh-hc---CCCCcccCCCCcccccCchhHHhH-HhhcCCCCCCC
Q psy4574         278 TGLKPHCCEICGRSYSTAAYLKVHMS-CH---TGETSHTCHLCPQKFRQRSSYTLH-YKTHHPGVIPP  340 (343)
Q Consensus       278 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~  340 (343)
                      .|++||.|..|++.|.....|..|++ .|   .++++|.|++||+.|..++.|..| +++|.++.||.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            57899999999999999999999997 58   568999999999999999999999 89999998863

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=9.4e-14  Score=97.52  Aligned_cols=79  Identities=16%  Similarity=0.296  Sum_probs=63.1

Q ss_pred             ccchhHHHHHHhhhcCCCCcccccccccCC-ChHHHHHHHHhhcC-CCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         236 YVRKGALTEHHQREHQGKKPVCTICGKMLI-DKRSLANHMNTHTG-LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       236 f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      +.....+..|+..+...++|.|.+|++.|. ....|..|++.|++ +++|.|.+|++.|.....|..|+++|++++++.-
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            444455667763333456679999999999 99999999999888 8899999999999999999999999998887544


Q ss_pred             C
Q psy4574         314 H  314 (343)
Q Consensus       314 ~  314 (343)
                      .
T Consensus        86 ~   86 (98)
T 2gqj_A           86 E   86 (98)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.40  E-value=5.3e-13  Score=83.50  Aligned_cols=56  Identities=30%  Similarity=0.571  Sum_probs=52.0

Q ss_pred             CcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         254 KPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       254 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      +|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            46899999999999999999999999999999999999999999999999998775

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.39  E-value=3.6e-13  Score=84.28  Aligned_cols=56  Identities=32%  Similarity=0.602  Sum_probs=48.7

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      +++|.|++|++.|.+...|..|++.|++++||.|.+|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45679999999999999999999999999999999999999999999999988763

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=5.5e-13  Score=89.97  Aligned_cols=58  Identities=21%  Similarity=0.547  Sum_probs=51.5

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHh-hhcCCCC
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHM-SCHTGET  309 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  309 (343)
                      .+.+.|++|++.|.....|..|+++|++++||.|.+|+++|.....|.+|+ +.|.++.
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            445689999999999999999999999999999999999999999999997 5677654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=5.5e-13  Score=87.28  Aligned_cols=60  Identities=25%  Similarity=0.414  Sum_probs=50.4

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      .++|.|.+|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++++.
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            455688888888888888888888888888899999999998888999998888887653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.7e-13  Score=88.95  Aligned_cols=59  Identities=29%  Similarity=0.664  Sum_probs=50.7

Q ss_pred             hhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         276 THTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       276 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      .+.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            46778889997  599999999999999988888888999999999999999999988763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.3e-12  Score=85.97  Aligned_cols=59  Identities=34%  Similarity=0.529  Sum_probs=49.6

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      ..++|.|++|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.++.
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            34556888888888888888888888888899999999999999999999998887654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=84.63  Aligned_cols=59  Identities=15%  Similarity=0.295  Sum_probs=53.5

Q ss_pred             cCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC-CCcccccCchhHHhHHhhcCCCCC
Q psy4574         278 TGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH-LCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       278 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      .+++||.|..|++.|. ...|..|+++ .++++|.|+ .|++.|..++.|..|+++|-+..|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            4678999999999999 9999999988 889999999 999999999999999999887765

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=3.9e-12  Score=80.40  Aligned_cols=55  Identities=29%  Similarity=0.656  Sum_probs=49.6

Q ss_pred             CcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHh-hhcCCC
Q psy4574         254 KPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHM-SCHTGE  308 (343)
Q Consensus       254 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  308 (343)
                      +|.|++|++.|.....|..|++.|+++++|.|.+|++.|.....|..|+ .+|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999999999999999999999999997 677654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.27  E-value=6.6e-12  Score=87.51  Aligned_cols=61  Identities=25%  Similarity=0.378  Sum_probs=47.8

Q ss_pred             CcccccccccCCChHHHHHHHHh-hcCCCc--------eeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         254 KPVCTICGKMLIDKRSLANHMNT-HTGLKP--------HCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       254 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      .+.|..|++.|.....|..|++. |.++++        |.|.+|++.|.....|..|+++|.++++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34677788888888888888776 777666        78888888888888888888888888888875

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.2e-12  Score=75.99  Aligned_cols=44  Identities=27%  Similarity=0.433  Sum_probs=41.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=75.76  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=75.90  Aligned_cols=45  Identities=29%  Similarity=0.515  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.23  E-value=3.5e-12  Score=75.80  Aligned_cols=45  Identities=29%  Similarity=0.459  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=2.8e-12  Score=75.46  Aligned_cols=44  Identities=27%  Similarity=0.489  Sum_probs=40.2

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45678899999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.22  E-value=3.7e-12  Score=75.70  Aligned_cols=44  Identities=25%  Similarity=0.385  Sum_probs=40.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            66788999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.4e-12  Score=75.85  Aligned_cols=44  Identities=27%  Similarity=0.412  Sum_probs=40.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=75.82  Aligned_cols=44  Identities=32%  Similarity=0.519  Sum_probs=41.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.5e-12  Score=75.80  Aligned_cols=44  Identities=32%  Similarity=0.416  Sum_probs=40.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.7e-12  Score=75.70  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=41.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.1e-12  Score=75.49  Aligned_cols=44  Identities=32%  Similarity=0.429  Sum_probs=40.8

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.3e-12  Score=75.90  Aligned_cols=44  Identities=34%  Similarity=0.523  Sum_probs=40.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|+++++|.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.5e-14  Score=94.65  Aligned_cols=54  Identities=22%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             ccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         256 VCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       256 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|++|++.|.....|..       +++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus        20 ~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           20 KCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             ECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             eCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            44444444444443332       3555555555555555555555555555555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.8e-12  Score=75.20  Aligned_cols=45  Identities=29%  Similarity=0.497  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3.7e-12  Score=75.70  Aligned_cols=45  Identities=27%  Similarity=0.443  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.3e-12  Score=75.39  Aligned_cols=44  Identities=32%  Similarity=0.437  Sum_probs=41.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=75.41  Aligned_cols=45  Identities=36%  Similarity=0.572  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.22  E-value=3.9e-12  Score=75.60  Aligned_cols=45  Identities=29%  Similarity=0.406  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.22  E-value=3.6e-12  Score=75.73  Aligned_cols=45  Identities=31%  Similarity=0.475  Sum_probs=40.7

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.7e-12  Score=75.24  Aligned_cols=45  Identities=24%  Similarity=0.393  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.4e-12  Score=75.36  Aligned_cols=44  Identities=27%  Similarity=0.423  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=75.20  Aligned_cols=44  Identities=32%  Similarity=0.611  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.4e-12  Score=75.38  Aligned_cols=44  Identities=39%  Similarity=0.559  Sum_probs=40.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.3e-11  Score=82.38  Aligned_cols=59  Identities=27%  Similarity=0.533  Sum_probs=22.9

Q ss_pred             cCCCCCcccCCcCcccccchhHHHhHHhhccCCCCCCccccccccccCCHHHHHHHHHH
Q psy4574         123 SHMHEKLYQCDFCGSQQRTKCRFYYHLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAV  181 (343)
Q Consensus       123 ~H~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  181 (343)
                      .|.++++|.|+.|++.|.+...|..|++..+......|.|+.|++.|.....|..|++.
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~   67 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK   67 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHH
Confidence            34444444444444444444444444432222211123444444444444444444433

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=75.19  Aligned_cols=45  Identities=29%  Similarity=0.512  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367789999999999999999999999999999999999999987

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.1e-11  Score=80.03  Aligned_cols=59  Identities=24%  Similarity=0.492  Sum_probs=47.9

Q ss_pred             ccccccccCcccccccChhHHHHHHHHhc-CCCCcccccccccccCChHHHHHHhhhhcC
Q psy4574          31 DVWDEERCRSCGLLSGSITQTYIHYLECK-NRGKLYECSLCNESFENKKVLFRHLRGKHG   89 (343)
Q Consensus        31 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h-~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   89 (343)
                      .++++|.|+.|++.|.+...|..|+...| .++++|.|++|++.|.+...|..|++.+|+
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45678888888888888888888855547 577888888888888888888888888775

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=75.45  Aligned_cols=44  Identities=32%  Similarity=0.500  Sum_probs=40.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=75.42  Aligned_cols=44  Identities=32%  Similarity=0.483  Sum_probs=40.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.5e-12  Score=75.80  Aligned_cols=45  Identities=27%  Similarity=0.411  Sum_probs=40.9

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.21  E-value=5e-12  Score=75.13  Aligned_cols=44  Identities=32%  Similarity=0.473  Sum_probs=41.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999988

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.7e-14  Score=93.87  Aligned_cols=67  Identities=15%  Similarity=0.245  Sum_probs=60.7

Q ss_pred             hHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         267 KRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       267 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ...|..|++.|.++++|.|.+|++.|.....|..       +++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~   69 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSG   69 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSS
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCC
Confidence            3456778899999999999999999999888876       789999999999999999999999999998874

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=75.42  Aligned_cols=45  Identities=33%  Similarity=0.587  Sum_probs=40.5

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.3e-12  Score=75.94  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=3.6e-12  Score=75.76  Aligned_cols=44  Identities=34%  Similarity=0.508  Sum_probs=40.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.1e-11  Score=81.74  Aligned_cols=65  Identities=28%  Similarity=0.523  Sum_probs=52.9

Q ss_pred             HHHHHhhhcCCC-Ccccc--cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         242 LTEHHQREHQGK-KPVCT--ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       242 l~~H~~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      +..|....+.+. +|.|+  .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344444445444 45897  599999999999999999999999999999999999999999998873

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=75.38  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=75.54  Aligned_cols=44  Identities=27%  Similarity=0.449  Sum_probs=40.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=75.40  Aligned_cols=45  Identities=22%  Similarity=0.374  Sum_probs=40.9

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788899999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.7e-12  Score=75.72  Aligned_cols=45  Identities=27%  Similarity=0.507  Sum_probs=40.9

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=75.79  Aligned_cols=45  Identities=22%  Similarity=0.380  Sum_probs=41.0

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.3e-12  Score=75.01  Aligned_cols=45  Identities=24%  Similarity=0.511  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.6e-12  Score=75.73  Aligned_cols=45  Identities=33%  Similarity=0.499  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.4e-12  Score=75.34  Aligned_cols=44  Identities=34%  Similarity=0.539  Sum_probs=40.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.3e-12  Score=74.66  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56778999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=1.6e-11  Score=75.59  Aligned_cols=47  Identities=28%  Similarity=0.531  Sum_probs=42.2

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhh-hcCCCCcccCCCCcccccC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGETSHTCHLCPQKFRQ  322 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  322 (343)
                      .|.+++||.|.+|++.|.....|..|++ +|.++++|.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3677899999999999999999999986 8999999999999999975

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.19  E-value=7.8e-12  Score=74.25  Aligned_cols=44  Identities=27%  Similarity=0.380  Sum_probs=40.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678899999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.8e-12  Score=75.19  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=39.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778889999999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=6.4e-12  Score=74.64  Aligned_cols=44  Identities=20%  Similarity=0.266  Sum_probs=40.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.18  E-value=1.8e-11  Score=80.45  Aligned_cols=56  Identities=32%  Similarity=0.772  Sum_probs=45.3

Q ss_pred             cCCCceeCCc--cCcccCCHHHHHHHhhhcCCCCcccCCC--CcccccCchhHHhHHhhc
Q psy4574         278 TGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       278 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  333 (343)
                      ...++|.|.+  |++.|.....|..|+++|.++++|.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4557788877  8888888888888888888888888865  888888888888888764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.8e-11  Score=80.92  Aligned_cols=61  Identities=25%  Similarity=0.421  Sum_probs=49.2

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcC---CCceeCCccCcccCCHHHHHHHh-hhcCCCCccc
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTG---LKPHCCEICGRSYSTAAYLKVHM-SCHTGETSHT  312 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~  312 (343)
                      .++|.|.+|++.|.....|..|++.|.+   +++|.|.+|++.|.....|..|+ ..|.+..+..
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            4556888888888888888888888875   78899999999999999999998 5566665543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.7e-12  Score=75.71  Aligned_cols=44  Identities=27%  Similarity=0.425  Sum_probs=40.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66788999999999999999999999999999999999999987

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.18  E-value=1.9e-11  Score=85.12  Aligned_cols=60  Identities=22%  Similarity=0.363  Sum_probs=55.6

Q ss_pred             CceeCCccCcccCCHHHHHHHhhh-cCCCCc--------ccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSC-HTGETS--------HTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ..|.|.+|++.|.....|..|+++ |.++++        |.|++|++.|.....|..|+++|+++.||.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            347899999999999999999998 888877        999999999999999999999999999874

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.3e-12  Score=75.00  Aligned_cols=44  Identities=30%  Similarity=0.512  Sum_probs=40.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.2e-12  Score=74.17  Aligned_cols=45  Identities=29%  Similarity=0.464  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .|+++|+++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366788999999999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=74.10  Aligned_cols=44  Identities=30%  Similarity=0.412  Sum_probs=40.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhh-hcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  316 (343)
                      |+++|.+++||.|.+|++.|.....|..|++ +|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            6678899999999999999999999999999 9999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.5e-12  Score=74.32  Aligned_cols=44  Identities=30%  Similarity=0.433  Sum_probs=40.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55678899999999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=73.08  Aligned_cols=44  Identities=27%  Similarity=0.490  Sum_probs=39.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778899999999999999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=3.6e-11  Score=77.48  Aligned_cols=57  Identities=19%  Similarity=0.342  Sum_probs=46.9

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCC-ccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCE-ICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      .+++.|..|++.|. ...|..|+++ .+++||.|. .|++.|.....|..|+++|....+
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            34568888888888 8888888888 888899999 899999888899999888876543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=2.6e-11  Score=70.35  Aligned_cols=42  Identities=24%  Similarity=0.498  Sum_probs=34.8

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456678888888888888888888888888888888888885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=4.3e-11  Score=70.60  Aligned_cols=42  Identities=21%  Similarity=0.500  Sum_probs=38.6

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCc
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCP  317 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  317 (343)
                      .|.+++||.|.+|++.|.....|..|+++|.++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578889999999999999999999999999999999999996

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=6.2e-11  Score=70.95  Aligned_cols=43  Identities=26%  Similarity=0.432  Sum_probs=38.9

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcc
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQ  318 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  318 (343)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3567889999999999999999999999999999999999985

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=1.9e-12  Score=82.27  Aligned_cols=55  Identities=11%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             HHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHh
Q psy4574         271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTL  328 (343)
Q Consensus       271 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  328 (343)
                      ..|++.|.+++||.|++|++.|.....|.   ++|.++++|.|++||+.|...+++..
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccc
Confidence            45778899999999999999999988886   78999999999999999988776554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.4e-11  Score=69.88  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=34.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455678888888888888888888888888888888888874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=71.19  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=37.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888899999999999999999999999999999998864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.9e-11  Score=71.17  Aligned_cols=43  Identities=33%  Similarity=0.515  Sum_probs=39.4

Q ss_pred             HHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         274 MNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       274 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      +++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3568889999999999999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.5e-11  Score=70.87  Aligned_cols=43  Identities=33%  Similarity=0.509  Sum_probs=37.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888899999999999999999999999998888898864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=71.02  Aligned_cols=43  Identities=30%  Similarity=0.470  Sum_probs=37.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5677888889999999999999999999998898888888864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.07  E-value=3.7e-11  Score=71.26  Aligned_cols=43  Identities=35%  Similarity=0.544  Sum_probs=37.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888899999999999999999999999999889998864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.5e-11  Score=70.85  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=37.2

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5677888889999999999999999999999998888888864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.7e-11  Score=70.80  Aligned_cols=43  Identities=28%  Similarity=0.512  Sum_probs=37.2

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888889999999999999999999999998888898864

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.5e-11  Score=71.34  Aligned_cols=43  Identities=30%  Similarity=0.489  Sum_probs=37.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5677888889999999999999999999998888888888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.8e-11  Score=70.74  Aligned_cols=43  Identities=33%  Similarity=0.496  Sum_probs=38.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            6677888899999999999999999999999999999999874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=70.83  Aligned_cols=43  Identities=33%  Similarity=0.501  Sum_probs=37.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888899999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=70.69  Aligned_cols=43  Identities=35%  Similarity=0.521  Sum_probs=37.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888888999999999999999999998888888888864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=70.66  Aligned_cols=43  Identities=28%  Similarity=0.497  Sum_probs=37.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888899999999999999999999999999889998864

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=70.99  Aligned_cols=43  Identities=28%  Similarity=0.535  Sum_probs=36.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5677888888999999999999999999988888888888864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.3e-11  Score=70.96  Aligned_cols=43  Identities=30%  Similarity=0.515  Sum_probs=37.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888888999999999999999999998888888888864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.7e-11  Score=70.78  Aligned_cols=43  Identities=30%  Similarity=0.480  Sum_probs=36.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5667888888999999999999999999988888888888864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=70.38  Aligned_cols=43  Identities=30%  Similarity=0.543  Sum_probs=36.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5677888888999999999999999999998888888888864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.3e-11  Score=70.57  Aligned_cols=43  Identities=30%  Similarity=0.504  Sum_probs=37.2

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677888889999999999999999999999998888888864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=70.54  Aligned_cols=43  Identities=33%  Similarity=0.509  Sum_probs=37.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888899999999999999999999999999999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.4e-11  Score=70.50  Aligned_cols=43  Identities=30%  Similarity=0.554  Sum_probs=37.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5567888899999999999999999999999999999998864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.2e-11  Score=71.01  Aligned_cols=42  Identities=31%  Similarity=0.433  Sum_probs=37.9

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      ++|.++++|.|.+|++.|.....|..|+++|.++++|.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467888999999999999999999999999999999999887

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.6e-11  Score=70.85  Aligned_cols=43  Identities=33%  Similarity=0.517  Sum_probs=37.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6677888899999999999999999999999998889998864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=69.92  Aligned_cols=42  Identities=26%  Similarity=0.475  Sum_probs=34.8

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566788888888888888888888888888888888888874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.1e-11  Score=70.30  Aligned_cols=43  Identities=26%  Similarity=0.430  Sum_probs=36.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667888888889889888888888888888888888888864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.3e-11  Score=69.46  Aligned_cols=42  Identities=33%  Similarity=0.564  Sum_probs=34.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            566778888888888888888888888888888888888874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.9e-11  Score=70.04  Aligned_cols=42  Identities=29%  Similarity=0.463  Sum_probs=36.5

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888999999999999999999999889888888886

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=69.35  Aligned_cols=42  Identities=33%  Similarity=0.744  Sum_probs=34.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566777888888888888888888888888888888888874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=6.5e-11  Score=69.41  Aligned_cols=42  Identities=21%  Similarity=0.457  Sum_probs=32.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556677778888888888888888888888888877777774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.8e-11  Score=70.39  Aligned_cols=43  Identities=33%  Similarity=0.547  Sum_probs=36.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888863

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.9e-11  Score=68.83  Aligned_cols=42  Identities=14%  Similarity=0.221  Sum_probs=34.8

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566778888888888888888888888888888888888874

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=6.8e-11  Score=70.08  Aligned_cols=43  Identities=23%  Similarity=0.300  Sum_probs=36.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCC-CCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTG-ETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.+ +++|.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56678888889999999999988999999988888 88888864

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.02  E-value=3.1e-10  Score=74.44  Aligned_cols=54  Identities=33%  Similarity=0.670  Sum_probs=47.6

Q ss_pred             CCCccccc--ccccCCChHHHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhc
Q psy4574         252 GKKPVCTI--CGKMLIDKRSLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       252 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  305 (343)
                      .+++.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34568887  9999999999999999999999999975  999999999999998875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.02  E-value=4.6e-11  Score=73.53  Aligned_cols=50  Identities=18%  Similarity=0.185  Sum_probs=31.1

Q ss_pred             cccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         290 RSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       290 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      +.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+++.|+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            44555556666666666666666666666666666666666666666554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.6e-11  Score=68.62  Aligned_cols=41  Identities=32%  Similarity=0.622  Sum_probs=27.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            44556666666666666666666666666666666666665

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=7.7e-11  Score=68.31  Aligned_cols=41  Identities=34%  Similarity=0.602  Sum_probs=29.9

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |+++|.+++||.|.+|++.|...+.|..|+++|.++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            44566777777777777777777777777777777777766

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.3e-11  Score=69.95  Aligned_cols=42  Identities=31%  Similarity=0.548  Sum_probs=36.7

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            667788888999999999999999999999899888888886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.3e-11  Score=69.47  Aligned_cols=43  Identities=30%  Similarity=0.518  Sum_probs=36.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5677888888999999999988889999988888888888863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=68.98  Aligned_cols=42  Identities=31%  Similarity=0.544  Sum_probs=35.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456678888888888888888888888888888888888885

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.00  E-value=1.1e-10  Score=67.61  Aligned_cols=41  Identities=22%  Similarity=0.433  Sum_probs=29.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34556677777777777777777777777777777777766

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.00  E-value=6.8e-11  Score=72.73  Aligned_cols=52  Identities=13%  Similarity=0.169  Sum_probs=47.2

Q ss_pred             cccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCccc
Q psy4574         261 GKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHT  312 (343)
Q Consensus       261 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  312 (343)
                      ++.|.....|..|++.|.++++|.|.+|++.|...+.|..|+++|.++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3568888889999999999999999999999999999999999999998873

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.3e-11  Score=69.93  Aligned_cols=43  Identities=23%  Similarity=0.447  Sum_probs=36.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      |+++|.++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888863

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=7.7e-11  Score=68.31  Aligned_cols=41  Identities=32%  Similarity=0.569  Sum_probs=30.3

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44567777777777777777777777777777777777766

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.6e-10  Score=67.66  Aligned_cols=42  Identities=19%  Similarity=0.414  Sum_probs=33.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |++.|.++++|.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            455677788888888888888888888888888888888874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=67.21  Aligned_cols=41  Identities=27%  Similarity=0.510  Sum_probs=23.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |+++|.+++||.|.+|++.|...+.|..|+++|.++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            34455555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=68.31  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=39.3

Q ss_pred             HHhhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCCcccCCCC
Q psy4574         274 MNTHTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETSHTCHLC  316 (343)
Q Consensus       274 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  316 (343)
                      .++|.++++|.|.  +|++.|.....|..|+++|.++++|.|++|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4568889999998  899999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=8.4e-11  Score=68.94  Aligned_cols=42  Identities=21%  Similarity=0.366  Sum_probs=30.0

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455667777777777777777777777777777777777763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=8.8e-11  Score=69.57  Aligned_cols=42  Identities=26%  Similarity=0.406  Sum_probs=34.6

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |+++|.+++||.|.+|++.|.....|..|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566778888888888888888888888888888888888885

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=4.7e-10  Score=65.29  Aligned_cols=40  Identities=23%  Similarity=0.283  Sum_probs=34.5

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      .|.++++|.|.+|++.|.....|..|+++|.++++|.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            5778888999999999999999999998888888888864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=7.5e-10  Score=63.65  Aligned_cols=38  Identities=26%  Similarity=0.527  Sum_probs=30.6

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      +|.+++||.|.+|++.|.....|..|+++|.++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46777888888888888888888888888888888776

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=5.1e-10  Score=66.20  Aligned_cols=41  Identities=27%  Similarity=0.442  Sum_probs=34.4

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      +.|.++++|.|.+|++.|.....|..|+++|.++++|.|.+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45778888888888888888888888888888888888863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.5e-10  Score=66.55  Aligned_cols=41  Identities=37%  Similarity=0.600  Sum_probs=35.2

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      +.|.++++|.|.+|++.|.....|..|+++|.++++|.|+.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45778888999999999999999999999998888888863

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=7.9e-11  Score=77.66  Aligned_cols=66  Identities=18%  Similarity=0.247  Sum_probs=57.3

Q ss_pred             HHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         269 SLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       269 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      .|..|+..+.+++|+.|..|++.| ....|..|+ .|.+++++.|+.|++.|. ...|..|++++.++.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            456677788899999999999999 599999999 899999999999999887 689999998876653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.87  E-value=1e-09  Score=63.40  Aligned_cols=40  Identities=25%  Similarity=0.429  Sum_probs=37.5

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.6e-10  Score=63.99  Aligned_cols=41  Identities=22%  Similarity=0.386  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            37889999999999999999999999999999999999874

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.8e-09  Score=66.22  Aligned_cols=43  Identities=33%  Similarity=0.631  Sum_probs=33.6

Q ss_pred             CCCcccccccccCCChHHHHHHHH-hhcCCCceeCCccCcccCC
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMN-THTGLKPHCCEICGRSYST  294 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  294 (343)
                      .++|.|++|++.|.....|..|++ +|.+++||.|.+|++.|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            345578888888888888888876 7888888888888888864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=63.72  Aligned_cols=42  Identities=26%  Similarity=0.353  Sum_probs=39.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPK  341 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  341 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            478899999999999999999999999999999999999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.4e-09  Score=62.78  Aligned_cols=40  Identities=25%  Similarity=0.406  Sum_probs=37.4

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=62.87  Aligned_cols=40  Identities=20%  Similarity=0.429  Sum_probs=37.5

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=64.33  Aligned_cols=41  Identities=27%  Similarity=0.437  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCC
Confidence            58899999999999999999999999999999999998874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=1.4e-09  Score=63.58  Aligned_cols=41  Identities=29%  Similarity=0.436  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=64.41  Aligned_cols=41  Identities=29%  Similarity=0.348  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.5e-09  Score=64.06  Aligned_cols=41  Identities=24%  Similarity=0.286  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=64.10  Aligned_cols=41  Identities=27%  Similarity=0.301  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=63.85  Aligned_cols=41  Identities=24%  Similarity=0.314  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=64.07  Aligned_cols=41  Identities=29%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG   42 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999999998874

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=64.08  Aligned_cols=38  Identities=37%  Similarity=0.567  Sum_probs=33.0

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566999999999999999999999999999999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.8e-09  Score=63.78  Aligned_cols=44  Identities=25%  Similarity=0.246  Sum_probs=35.2

Q ss_pred             HHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         245 HHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       245 H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      |+..+.+.++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44233344567999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=63.91  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.82  E-value=1.5e-09  Score=64.14  Aligned_cols=41  Identities=22%  Similarity=0.318  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=63.91  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=63.34  Aligned_cols=41  Identities=29%  Similarity=0.480  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.7e-09  Score=63.24  Aligned_cols=40  Identities=25%  Similarity=0.395  Sum_probs=37.5

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=63.76  Aligned_cols=41  Identities=24%  Similarity=0.378  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=64.07  Aligned_cols=41  Identities=34%  Similarity=0.460  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=63.77  Aligned_cols=41  Identities=24%  Similarity=0.373  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            48889999999999999999999999999999999998875

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.81  E-value=1.6e-09  Score=63.94  Aligned_cols=41  Identities=29%  Similarity=0.337  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcC
Confidence            48889999999999999999999999999999999998874

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.81  E-value=1.4e-09  Score=64.22  Aligned_cols=41  Identities=27%  Similarity=0.342  Sum_probs=38.6

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG   42 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=63.38  Aligned_cols=41  Identities=29%  Similarity=0.446  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=63.74  Aligned_cols=41  Identities=24%  Similarity=0.345  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=64.00  Aligned_cols=41  Identities=27%  Similarity=0.380  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTS
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            48899999999999999999999999999999999998874

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.81  E-value=1.5e-09  Score=64.16  Aligned_cols=41  Identities=24%  Similarity=0.320  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2.2e-09  Score=63.35  Aligned_cols=41  Identities=27%  Similarity=0.398  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=2e-09  Score=63.59  Aligned_cols=41  Identities=20%  Similarity=0.299  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.9e-09  Score=63.68  Aligned_cols=38  Identities=32%  Similarity=0.427  Sum_probs=32.5

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566899999999999999999999999999999887

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=64.09  Aligned_cols=41  Identities=27%  Similarity=0.380  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=63.73  Aligned_cols=41  Identities=24%  Similarity=0.412  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG   42 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=63.84  Aligned_cols=41  Identities=29%  Similarity=0.439  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=64.31  Aligned_cols=41  Identities=22%  Similarity=0.425  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=63.87  Aligned_cols=41  Identities=29%  Similarity=0.362  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.80  E-value=2.2e-09  Score=61.96  Aligned_cols=40  Identities=25%  Similarity=0.405  Sum_probs=37.6

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            6788999999999999999999999999999999999874

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=63.17  Aligned_cols=40  Identities=23%  Similarity=0.306  Sum_probs=37.9

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            7889999999999999999999999999999999998874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=63.06  Aligned_cols=41  Identities=29%  Similarity=0.407  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            48899999999999999999999999999999999998874

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=63.85  Aligned_cols=41  Identities=27%  Similarity=0.306  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.9e-09  Score=63.62  Aligned_cols=41  Identities=24%  Similarity=0.353  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999999875

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.6e-09  Score=63.98  Aligned_cols=41  Identities=24%  Similarity=0.361  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=63.64  Aligned_cols=41  Identities=27%  Similarity=0.365  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.4e-09  Score=63.18  Aligned_cols=41  Identities=24%  Similarity=0.383  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=63.74  Aligned_cols=41  Identities=29%  Similarity=0.367  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.80  E-value=2.4e-09  Score=63.20  Aligned_cols=41  Identities=29%  Similarity=0.395  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=63.95  Aligned_cols=41  Identities=27%  Similarity=0.371  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=63.48  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            58899999999999999999999999999999999998874

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2e-09  Score=63.52  Aligned_cols=41  Identities=24%  Similarity=0.367  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.2e-09  Score=63.41  Aligned_cols=41  Identities=27%  Similarity=0.358  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=64.27  Aligned_cols=38  Identities=34%  Similarity=0.511  Sum_probs=32.3

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|++.|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44556898999999999999999889999999999887

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=63.74  Aligned_cols=41  Identities=27%  Similarity=0.421  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.5e-09  Score=63.12  Aligned_cols=41  Identities=27%  Similarity=0.346  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.6e-09  Score=63.95  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=63.63  Aligned_cols=41  Identities=27%  Similarity=0.346  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            47889999999999999999999999999999999998874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.4e-09  Score=63.21  Aligned_cols=41  Identities=20%  Similarity=0.279  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            37889999999999999999999999999999999998874

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=64.17  Aligned_cols=38  Identities=34%  Similarity=0.399  Sum_probs=32.6

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|++.|.+++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556899999999999999999999999999999887

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=63.64  Aligned_cols=41  Identities=27%  Similarity=0.361  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2e-09  Score=63.58  Aligned_cols=41  Identities=29%  Similarity=0.423  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998874

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.9e-09  Score=62.84  Aligned_cols=41  Identities=24%  Similarity=0.365  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            37889999999999999999999999999999999998874

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.8e-09  Score=62.93  Aligned_cols=41  Identities=24%  Similarity=0.253  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSS
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3e-09  Score=62.80  Aligned_cols=38  Identities=32%  Similarity=0.426  Sum_probs=33.0

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|++.|.+++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44566899999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.9e-09  Score=62.85  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            37889999999999999999999999999999999998874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.1e-09  Score=62.03  Aligned_cols=41  Identities=24%  Similarity=0.312  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            47889999999999999999999999999999999998874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=62.63  Aligned_cols=40  Identities=20%  Similarity=0.302  Sum_probs=37.7

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.78  E-value=3.1e-09  Score=62.71  Aligned_cols=41  Identities=27%  Similarity=0.332  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG   42 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCS
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.1e-09  Score=63.47  Aligned_cols=41  Identities=32%  Similarity=0.372  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=63.97  Aligned_cols=38  Identities=34%  Similarity=0.622  Sum_probs=32.4

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|.+|++.|.....|..|+++|.+++||.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34556899999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.3e-09  Score=63.32  Aligned_cols=41  Identities=20%  Similarity=0.287  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.8e-09  Score=63.13  Aligned_cols=41  Identities=27%  Similarity=0.301  Sum_probs=38.5

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3e-09  Score=62.78  Aligned_cols=40  Identities=28%  Similarity=0.382  Sum_probs=37.6

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.||.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            7789999999999999999999999999999999998874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.9e-09  Score=62.26  Aligned_cols=40  Identities=28%  Similarity=0.428  Sum_probs=37.5

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=3.5e-09  Score=62.47  Aligned_cols=41  Identities=27%  Similarity=0.385  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=3.3e-09  Score=62.59  Aligned_cols=41  Identities=24%  Similarity=0.374  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.7e-09  Score=63.88  Aligned_cols=41  Identities=29%  Similarity=0.401  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG   42 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2e-09  Score=63.52  Aligned_cols=43  Identities=19%  Similarity=0.204  Sum_probs=34.1

Q ss_pred             HHhhhcC-CCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         245 HHQREHQ-GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       245 H~~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      |+ +.|. .++|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SG-SSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CC-CCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CC-CCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44 3444 4556888899999999999999888988899999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.9e-09  Score=62.29  Aligned_cols=41  Identities=27%  Similarity=0.226  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=4.1e-09  Score=62.80  Aligned_cols=40  Identities=33%  Similarity=0.543  Sum_probs=32.5

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGR  290 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  290 (343)
                      ..++|.|.+|++.|.....|..|+++|++++||.|.+|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3455688888888888888888888888888888888875

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.75  E-value=6.1e-09  Score=61.42  Aligned_cols=44  Identities=23%  Similarity=0.245  Sum_probs=23.4

Q ss_pred             HHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCccccccc
Q psy4574         148 HLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYC  193 (343)
Q Consensus       148 H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  193 (343)
                      |++.+.++.+  |.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~--~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKP--YECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCS--CBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCc--eECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4444444433  3555555555555555555555555555555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=3.1e-09  Score=62.73  Aligned_cols=41  Identities=22%  Similarity=0.340  Sum_probs=38.2

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.8e-09  Score=62.89  Aligned_cols=41  Identities=24%  Similarity=0.303  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            48889999999999999999999999999999999998874

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=4.1e-09  Score=62.19  Aligned_cols=41  Identities=22%  Similarity=0.307  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            37889999999999999999999999999999999998874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.1e-09  Score=61.39  Aligned_cols=44  Identities=18%  Similarity=0.153  Sum_probs=23.2

Q ss_pred             HHhhccCCCCCCccccccccccCCHHHHHHHHHHhCCCCccccccc
Q psy4574         148 HLRDKHLSKPANLSCEFCSRIFTKKELLRSHLAVHKIGKNYQCYYC  193 (343)
Q Consensus       148 H~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  193 (343)
                      |++.+.++.+  |.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~--~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKL--YNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCC--CCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCC--eECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4444444433  3555555555555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.9e-09  Score=62.28  Aligned_cols=41  Identities=22%  Similarity=0.284  Sum_probs=37.8

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCC-CCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHP-GVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++ +.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            378899999999999999999999999999999999 88764

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.4e-09  Score=62.56  Aligned_cols=41  Identities=27%  Similarity=0.381  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.8e-09  Score=63.80  Aligned_cols=41  Identities=24%  Similarity=0.311  Sum_probs=38.4

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            58889999999999999999999999999999999998875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.73  E-value=5.5e-09  Score=61.62  Aligned_cols=41  Identities=17%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            37789999999999999999999999999999999998874

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.3e-09  Score=63.27  Aligned_cols=41  Identities=24%  Similarity=0.371  Sum_probs=38.3

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999999998874

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=5.9e-09  Score=60.82  Aligned_cols=40  Identities=25%  Similarity=0.332  Sum_probs=37.5

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |+++|.++++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            6788999999999999999999999999999999998874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.9e-09  Score=61.84  Aligned_cols=38  Identities=29%  Similarity=0.277  Sum_probs=31.8

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|++|++.|.....|..|+++|.+++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34556888888888888888889888988899999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=7.4e-09  Score=61.33  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=37.9

Q ss_pred             HHhhhcCCCCcccCCCCcccccCchhHHhHHh-hcCCCCCCC
Q psy4574         300 VHMSCHTGETSHTCHLCPQKFRQRSSYTLHYK-THHPGVIPP  340 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~  340 (343)
                      .|+++|.++++|.|++|++.|...+.|..|++ +|.++.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            47889999999999999999999999999999 999888764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.69  E-value=1.4e-08  Score=57.49  Aligned_cols=37  Identities=22%  Similarity=0.388  Sum_probs=24.0

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTC  313 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  313 (343)
                      |.+++||.|.+|++.|...+.|..|+++|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455667777777777766777777666666666654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.69  E-value=1.6e-08  Score=59.27  Aligned_cols=38  Identities=24%  Similarity=0.450  Sum_probs=32.7

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccC
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICG  289 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  289 (343)
                      .++|.|.+|++.|.....|..|+++|+++++|.|++||
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45668889999999999999999999999999999886

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=8.9e-09  Score=57.48  Aligned_cols=35  Identities=26%  Similarity=0.430  Sum_probs=21.1

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |+++|.++++|.|+.|++.|...+.|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45555666666666666666666666666665554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=8.8e-09  Score=57.48  Aligned_cols=35  Identities=31%  Similarity=0.569  Sum_probs=21.8

Q ss_pred             hhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         303 SCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       303 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      ++|.++++|.|++|++.|...+.|..|+++|+++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34556666666666666666666666666666554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=8.9e-10  Score=74.88  Aligned_cols=57  Identities=16%  Similarity=0.190  Sum_probs=45.0

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .+|.+++||.|.+|++.|.....|..|+++|.++++|.|..|.    .+..|..|.+++.+
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            4577888899999999998888898998888888888887665    34556667777666

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.8e-08  Score=57.68  Aligned_cols=38  Identities=32%  Similarity=0.516  Sum_probs=35.2

Q ss_pred             hhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         303 SCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       303 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            46889999999999999999999999999999998874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.63  E-value=1.2e-08  Score=56.86  Aligned_cols=36  Identities=33%  Similarity=0.524  Sum_probs=32.4

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      |++.|.+++||.|.+|++.|.....|..|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567889999999999999999999999999998763

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.62  E-value=2.2e-08  Score=55.01  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=17.8

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      |.++++|.|++|++.|...+.|..|+++|+++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344555555555555555555555555555543

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.7e-08  Score=59.48  Aligned_cols=39  Identities=28%  Similarity=0.392  Sum_probs=36.4

Q ss_pred             hhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         302 MSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       302 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +++|.++++|.|++|++.|...+.|..|+++|+++.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            567899999999999999999999999999999998874

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.9e-08  Score=59.21  Aligned_cols=38  Identities=32%  Similarity=0.364  Sum_probs=31.2

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      +.++|.|.+|++.|.....|..|++.|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34556888888888888888888888888888888877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.61  E-value=1.2e-09  Score=69.12  Aligned_cols=52  Identities=12%  Similarity=0.216  Sum_probs=37.7

Q ss_pred             HHHhhhcC-CCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHH
Q psy4574         244 EHHQREHQ-GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLK  299 (343)
Q Consensus       244 ~H~~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  299 (343)
                      .|+ +.|. ..+|.|+.|++.|.....|.   +.|.+++||.|.+|++.|....++.
T Consensus         4 ~h~-~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            4 TDE-RDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCS-SSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hHH-HHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            354 3343 44558888888888777775   6788889999999999987766543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.6e-08  Score=59.20  Aligned_cols=40  Identities=25%  Similarity=0.463  Sum_probs=36.4

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +..+|.++++|.|++|++.|.....|..|+++|+++.|+.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            3467889999999999999999999999999999998874

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.60  E-value=3.1e-08  Score=54.41  Aligned_cols=33  Identities=21%  Similarity=0.580  Sum_probs=17.3

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      |.++++|.|++|++.|...+.|..|+++|+++.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            344555555555555555555555555555443

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=2.4e-08  Score=58.76  Aligned_cols=37  Identities=32%  Similarity=0.384  Sum_probs=28.8

Q ss_pred             CCCcccccccccCCChHHHHHHHHhhcCCCceeCCcc
Q psy4574         252 GKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEIC  288 (343)
Q Consensus       252 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  288 (343)
                      .++|.|.+|++.|.....|..|++.|.+++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455788888888888888888888888888888776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.5e-08  Score=56.52  Aligned_cols=36  Identities=22%  Similarity=0.498  Sum_probs=31.5

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      ++|.+++||.|.+|++.|.....|..|+++|.++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457888999999999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.58  E-value=3.7e-08  Score=54.04  Aligned_cols=34  Identities=18%  Similarity=0.457  Sum_probs=30.5

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      |.++++|.|.+|++.|.....|..|+++|.++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6788999999999999999999999999988763

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=4.7e-08  Score=61.24  Aligned_cols=39  Identities=15%  Similarity=0.295  Sum_probs=32.8

Q ss_pred             hcCCCceeCCc--cCcccCCHHHHHHHh-hhcCCCCcccCCC
Q psy4574         277 HTGLKPHCCEI--CGRSYSTAAYLKVHM-SCHTGETSHTCHL  315 (343)
Q Consensus       277 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  315 (343)
                      ..+++||+|..  |+++|...+.|..|+ ++|.+++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46789999965  999999999999997 5899999988854

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.57  E-value=4.4e-08  Score=53.74  Aligned_cols=35  Identities=31%  Similarity=0.600  Sum_probs=31.0

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      +|.+++||.|.+|++.|...+.|..|+++|.++++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            36788999999999999999999999999988753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.56  E-value=4.4e-08  Score=56.68  Aligned_cols=38  Identities=24%  Similarity=0.427  Sum_probs=35.2

Q ss_pred             hhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         303 SCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       303 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ++|.++++|.|+.|++.|...+.|..|+++|+++.|+.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            46888999999999999999999999999999998874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.55  E-value=5e-08  Score=55.07  Aligned_cols=37  Identities=22%  Similarity=0.353  Sum_probs=33.4

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCCCCCCCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPPK  341 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~  341 (343)
                      |.++++|.|++|++.|...+.|..|+++|+++.|+..
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4678999999999999999999999999999998854

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.54  E-value=5.6e-08  Score=52.57  Aligned_cols=30  Identities=17%  Similarity=0.353  Sum_probs=15.1

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      ||.|.+|++.|.....|..|+++|.++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            445555555555555555555555544444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.46  E-value=8.1e-08  Score=52.67  Aligned_cols=32  Identities=22%  Similarity=0.407  Sum_probs=26.6

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHL  315 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  315 (343)
                      +.+++||.|..|+++|.+.++|.+|+       +|.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45788999999999999999999997       666754

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.1e-07  Score=53.00  Aligned_cols=30  Identities=23%  Similarity=0.314  Sum_probs=15.0

Q ss_pred             cCCCceeCCc--cCcccCCHHHHHHHhhhcCC
Q psy4574         278 TGLKPHCCEI--CGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       278 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  307 (343)
                      .+++||+|..  |+++|...+.|.+|+++|.+
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            4445555543  55555555555555555443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.2e-07  Score=52.84  Aligned_cols=33  Identities=15%  Similarity=0.223  Sum_probs=30.1

Q ss_pred             hcCCCCcccCCC--CcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHL--CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .+.+++||+|+.  |++.|..++.|..|+++|.+.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467889999986  999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=8.2e-08  Score=53.43  Aligned_cols=31  Identities=13%  Similarity=0.226  Sum_probs=16.7

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhH-HhhcC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLH-YKTHH  334 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h  334 (343)
                      +|.++++|.|+.|++.|...+.|..| +++|.
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            44555555555555555555555555 44443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.44  E-value=1.5e-07  Score=50.88  Aligned_cols=32  Identities=19%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      ++|.|++|++.|...+.|..|+++|.++.|+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47999999999999999999999999999875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.2e-08  Score=67.02  Aligned_cols=66  Identities=26%  Similarity=0.377  Sum_probs=50.3

Q ss_pred             HHHHHHhhhcCCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         241 ALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       241 ~l~~H~~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      .|..|+...-+.+++.|..|+..| ....|..|+ .+.+++||.|..|++.|. ...|..|+.++.+++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            445564223334555899999988 488889998 888999999999999887 488999998887653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.4e-07  Score=52.00  Aligned_cols=31  Identities=29%  Similarity=0.537  Sum_probs=15.7

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |.+++||.|.+|++.|.....|..|+++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3444555555555555555555555555443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.5e-07  Score=51.87  Aligned_cols=31  Identities=13%  Similarity=0.338  Sum_probs=15.2

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |.++++|.|++|++.|...+.|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            3444445555555555555555555544443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.8e-07  Score=51.62  Aligned_cols=31  Identities=23%  Similarity=0.312  Sum_probs=15.5

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |.+++||.|.+|++.|.....|..|+++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            3444555555555555555555555554443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.6e-07  Score=51.74  Aligned_cols=34  Identities=35%  Similarity=0.547  Sum_probs=31.1

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      .|.+++||.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5788999999999999999999999999998763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.8e-07  Score=51.59  Aligned_cols=33  Identities=21%  Similarity=0.439  Sum_probs=30.6

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .|.++++|.|++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            578899999999999999999999999998875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=1.6e-07  Score=52.52  Aligned_cols=32  Identities=28%  Similarity=0.479  Sum_probs=15.3

Q ss_pred             CCCceeCC--ccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         279 GLKPHCCE--ICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       279 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      +++||.|.  .|++.|...+.|..|+++|.++++
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            44445554  255555444445555444444443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1e-07  Score=53.03  Aligned_cols=34  Identities=24%  Similarity=0.279  Sum_probs=30.1

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHH-hhhcCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVH-MSCHTGE  308 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  308 (343)
                      ++|.+++||+|..|++.|...+.|..| +++|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468889999999999999999999999 8888764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=1.8e-07  Score=52.34  Aligned_cols=36  Identities=17%  Similarity=0.340  Sum_probs=31.2

Q ss_pred             cCCCCcccCC--CCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         305 HTGETSHTCH--LCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       305 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |.++++|.|+  .|++.|...+.|..|+++|.++.|++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4678899999  59999999999999999999988874

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2e-07  Score=51.44  Aligned_cols=33  Identities=21%  Similarity=0.424  Sum_probs=30.4

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .|.++++|.|++|++.|...+.|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            577889999999999999999999999998765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.3e-07  Score=51.08  Aligned_cols=31  Identities=23%  Similarity=0.584  Sum_probs=14.6

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      |.++++|.|++|++.|...+.|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            3344444444444444444444444444443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1.3e-07  Score=52.59  Aligned_cols=31  Identities=19%  Similarity=0.332  Sum_probs=15.9

Q ss_pred             cCCCCcccCCCCcccccCc-hhHHhHHhhcCC
Q psy4574         305 HTGETSHTCHLCPQKFRQR-SSYTLHYKTHHP  335 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~  335 (343)
                      |.++++|.|+.|++.|... +.|..|+++|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            4444555555555555555 555555555443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.9e-07  Score=55.33  Aligned_cols=40  Identities=23%  Similarity=0.331  Sum_probs=36.6

Q ss_pred             HhhhcCCCCcccCC--CCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         301 HMSCHTGETSHTCH--LCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       301 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      |.++|.++++|.|.  .|++.|...+.|..|+++|.++.|+.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            45788999999998  89999999999999999999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.7e-07  Score=52.04  Aligned_cols=35  Identities=17%  Similarity=0.343  Sum_probs=31.4

Q ss_pred             HhhcCCCceeCCccCcccCCH-HHHHHHhhhcCCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTA-AYLKVHMSCHTGET  309 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  309 (343)
                      ++|.+++||.|.+|++.|... +.|..|+++|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            357889999999999999999 99999999998753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.1e-07  Score=50.54  Aligned_cols=34  Identities=29%  Similarity=0.644  Sum_probs=31.0

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      .|.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4778899999999999999999999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.6e-07  Score=50.30  Aligned_cols=30  Identities=23%  Similarity=0.530  Sum_probs=14.4

Q ss_pred             CCCCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         306 TGETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       306 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .++++|.|++|++.|...+.|..|+++|++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            334444454555544444445555444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=4e-07  Score=50.13  Aligned_cols=34  Identities=26%  Similarity=0.503  Sum_probs=30.7

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      .|.+++||.|.+|++.|.....|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678899999999999999999999999998763

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.30  E-value=3.5e-07  Score=54.16  Aligned_cols=32  Identities=34%  Similarity=0.690  Sum_probs=19.6

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhh-hcCCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMS-CHTGE  308 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  308 (343)
                      |.+++||.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455666666666666666666666666 56554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.30  E-value=5.9e-08  Score=52.06  Aligned_cols=30  Identities=27%  Similarity=0.514  Sum_probs=18.3

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCCCCCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHPGVIP  339 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  339 (343)
                      +|.|+.|++.|...+.|..|+++|.++.|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666666666666666666666665554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.28  E-value=3.7e-07  Score=54.06  Aligned_cols=35  Identities=17%  Similarity=0.545  Sum_probs=29.3

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhHHh-hcCCCCC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLHYK-THHPGVI  338 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~  338 (343)
                      +|.++++|.|.+|++.|.....|..|++ +|.++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788999999999999999999999999 8777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.26  E-value=5.2e-07  Score=47.16  Aligned_cols=28  Identities=25%  Similarity=0.445  Sum_probs=19.3

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +|.|++|++.|...+.|..|+++|+++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5667777777777777777777766654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=1.5e-08  Score=68.78  Aligned_cols=54  Identities=19%  Similarity=0.218  Sum_probs=44.4

Q ss_pred             CCCCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         251 QGKKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       251 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +.++|.|++|++.|.....|..|+++|++++||+|..|.    ....|..|.+.|.+.
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             CCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            345669999999999999999999999999999998765    455677788877763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.24  E-value=7.7e-08  Score=51.58  Aligned_cols=31  Identities=13%  Similarity=0.255  Sum_probs=27.5

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      +||.|.+|++.|...+.|..|+++|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4789999999999999999999999988776

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=9.7e-07  Score=55.32  Aligned_cols=43  Identities=12%  Similarity=0.069  Sum_probs=36.6

Q ss_pred             ccccccccccccCc--ccccccChhHHHHHHHHhcCCCCcccccc
Q psy4574          27 SFSSDVWDEERCRS--CGLLSGSITQTYIHYLECKNRGKLYECSL   69 (343)
Q Consensus        27 ~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~h~~~~~~~C~~   69 (343)
                      .....+++||.|+.  |++.|.....|..|+++.|.+++|+.|..
T Consensus        19 ~~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           19 PTRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            33456789999975  99999999999999668899999999864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=2e-07  Score=55.00  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=25.6

Q ss_pred             HHhhhcCCCCcccCC--CCcccccCchhHHhHHhhcCCC
Q psy4574         300 VHMSCHTGETSHTCH--LCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       300 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .|+..|.++++|.|+  .|++.|...+.|..|+++|.++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            444557777777774  5777777777777777777654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=1e-06  Score=45.93  Aligned_cols=27  Identities=37%  Similarity=0.727  Sum_probs=13.7

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      +||.|.+|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.19  E-value=8.5e-07  Score=49.14  Aligned_cols=32  Identities=41%  Similarity=0.824  Sum_probs=17.0

Q ss_pred             hcCCCceeCCc--cCcccCCHHHHHHHhhhcCCC
Q psy4574         277 HTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       277 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      |.+++||.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34455555553  555555555555555555443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.18  E-value=1e-06  Score=45.62  Aligned_cols=25  Identities=20%  Similarity=0.525  Sum_probs=11.6

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      ||.|.+|++.|.....|..|+++|.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhc
Confidence            3444444444444444444444443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=45.79  Aligned_cols=29  Identities=24%  Similarity=0.479  Sum_probs=26.7

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +++|.|+.|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46899999999999999999999998876

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.17  E-value=1.4e-06  Score=44.75  Aligned_cols=26  Identities=31%  Similarity=0.830  Sum_probs=13.6

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||.|.+|++.|.....|..|+++|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            44555555555555555555555443

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.17  E-value=1.4e-06  Score=45.09  Aligned_cols=25  Identities=28%  Similarity=0.793  Sum_probs=11.3

Q ss_pred             cccCCCCcccccCchhHHhHHhhcC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +|.|+.|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhc
Confidence            3444444444444444444444443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=1.6e-06  Score=54.77  Aligned_cols=40  Identities=18%  Similarity=0.266  Sum_probs=30.9

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCc
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCP  317 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  317 (343)
                      +.+++||.|..|++.|.....|..|+++|.++. ..+.+++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            567788999999999999999999998888763 3344444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.15  E-value=1e-06  Score=45.63  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=26.0

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ++|.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999998875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=1.5e-07  Score=55.56  Aligned_cols=39  Identities=13%  Similarity=0.282  Sum_probs=32.7

Q ss_pred             HHHHHhhcCCCceeCC--ccCcccCCHHHHHHHhhhcCCCC
Q psy4574         271 ANHMNTHTGLKPHCCE--ICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       271 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      ..|...|.+++||.|.  .|++.|...+.|..|+++|.+++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445568899999996  79999999999999999998763

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.14  E-value=1.1e-06  Score=45.13  Aligned_cols=28  Identities=21%  Similarity=0.615  Sum_probs=25.5

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +++|.|+.|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999998864

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.13  E-value=1.5e-06  Score=44.93  Aligned_cols=29  Identities=34%  Similarity=0.741  Sum_probs=26.4

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      +||.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            57999999999999999999999998753

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=1.7e-06  Score=43.96  Aligned_cols=25  Identities=24%  Similarity=0.618  Sum_probs=12.9

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=1.4e-06  Score=44.34  Aligned_cols=25  Identities=28%  Similarity=0.615  Sum_probs=12.6

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +||.|..|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.4e-06  Score=45.04  Aligned_cols=26  Identities=38%  Similarity=0.887  Sum_probs=14.1

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45555555555555555555555544

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=1.1e-06  Score=44.82  Aligned_cols=27  Identities=22%  Similarity=0.417  Sum_probs=24.6

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +++|.|+.||+.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.11  E-value=1.5e-06  Score=44.13  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=12.2

Q ss_pred             ccCCCCcccccCchhHHhHHhhcC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |.|+.|++.|...+.|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            445555555555555555555444

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=2.8e-06  Score=53.69  Aligned_cols=31  Identities=19%  Similarity=0.310  Sum_probs=15.8

Q ss_pred             CCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         306 TGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       306 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .++++|.|.+|++.|...+.|..|+++|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3444555555555555555555555555544

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.11  E-value=1.4e-06  Score=44.23  Aligned_cols=27  Identities=44%  Similarity=0.792  Sum_probs=24.7

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +++|.|+.||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.09  E-value=2.7e-06  Score=44.82  Aligned_cols=26  Identities=35%  Similarity=0.832  Sum_probs=12.9

Q ss_pred             ceeCC--ccCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCE--ICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~--~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||.|.  .|++.|...+.|..|+++|.+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            44454  455555555555555554443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.08  E-value=1.5e-06  Score=48.07  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=29.6

Q ss_pred             hcCCCCcccCCC--CcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHL--CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .|.++++|.|.+  |++.|...+.|..|+++|.++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            367889999995  999999999999999998875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.08  E-value=2.1e-06  Score=44.70  Aligned_cols=29  Identities=21%  Similarity=0.410  Sum_probs=22.8

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46788888888888888888888877654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.07  E-value=2.7e-06  Score=43.10  Aligned_cols=26  Identities=27%  Similarity=0.553  Sum_probs=21.4

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||.|.+|++.|.....|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57888888888888888888888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=3.2e-06  Score=44.90  Aligned_cols=26  Identities=23%  Similarity=0.497  Sum_probs=12.8

Q ss_pred             cccCC--CCcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCH--LCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~--~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +|.|+  .|++.|...+.|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44454  455555555555555544443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.7e-06  Score=44.61  Aligned_cols=26  Identities=35%  Similarity=0.657  Sum_probs=12.6

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +|.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            34455555555555555555444443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.7e-06  Score=44.66  Aligned_cols=29  Identities=28%  Similarity=0.654  Sum_probs=26.3

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      +||.|..|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999988753

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=5.8e-07  Score=46.66  Aligned_cols=26  Identities=31%  Similarity=0.585  Sum_probs=14.2

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +|.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555555555555555555555544

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=6e-07  Score=46.60  Aligned_cols=28  Identities=43%  Similarity=0.892  Sum_probs=23.2

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +||.|.+|++.|....+|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4688888888888888888888888765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=4.2e-06  Score=44.39  Aligned_cols=30  Identities=20%  Similarity=0.456  Sum_probs=27.2

Q ss_pred             CCceeCC--ccCcccCCHHHHHHHhhhcCCCC
Q psy4574         280 LKPHCCE--ICGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       280 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      ++||.|.  .|++.|.....|..|+++|.+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4789999  89999999999999999998763

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.02  E-value=3.4e-06  Score=44.42  Aligned_cols=28  Identities=21%  Similarity=0.522  Sum_probs=25.8

Q ss_pred             CcccCC--CCcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCH--LCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ++|.|+  .||+.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            479998  9999999999999999999876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.1e-06  Score=44.31  Aligned_cols=28  Identities=18%  Similarity=0.441  Sum_probs=25.9

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ++|.|+.|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4799999999999999999999998875

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=8.1e-07  Score=46.44  Aligned_cols=27  Identities=19%  Similarity=0.455  Sum_probs=14.4

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ++|.|+.|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            345555555555555555555555544

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.5e-07  Score=46.34  Aligned_cols=28  Identities=39%  Similarity=0.761  Sum_probs=23.7

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            6788999999998888899998888764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=4.7e-06  Score=43.37  Aligned_cols=26  Identities=31%  Similarity=0.577  Sum_probs=13.2

Q ss_pred             cccCCCCcccccCchhHHhH-HhhcCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLH-YKTHHP  335 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H-~~~~h~  335 (343)
                      +|.|+.|++.|...+.|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 344433

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=4.9e-06  Score=43.30  Aligned_cols=28  Identities=29%  Similarity=0.683  Sum_probs=23.3

Q ss_pred             CceeCCccCcccCCHHHHHHH-hhhcCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVH-MSCHTGE  308 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  308 (343)
                      +||.|..|++.|...+.|..| +.+|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            478899999999998999999 6788765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.17  E-value=1.2e-06  Score=44.04  Aligned_cols=24  Identities=29%  Similarity=0.600  Sum_probs=12.5

Q ss_pred             cccCCCCcccccCchhHHhHHhhc
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      +|.|+.||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            445555555555555555555443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.93  E-value=4.1e-06  Score=45.76  Aligned_cols=27  Identities=19%  Similarity=0.276  Sum_probs=24.8

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHh
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~  331 (343)
                      +.+++||.|+.||+.|..++.|..|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            467899999999999999999999983

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=43.81  Aligned_cols=25  Identities=36%  Similarity=0.812  Sum_probs=21.3

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +||.|.+|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4788999999999888999888776

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.82  E-value=3e-05  Score=48.61  Aligned_cols=47  Identities=23%  Similarity=0.339  Sum_probs=35.1

Q ss_pred             cCcccCCHHHHHHHh-hhcCCCC------cccCC--CCcccccCchhHHhHHhhcC
Q psy4574         288 CGRSYSTAAYLKVHM-SCHTGET------SHTCH--LCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       288 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |++.|.+...|..|+ ..|-+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            777777777777777 4565544      68886  78888888888888888765

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.72  E-value=2e-05  Score=40.41  Aligned_cols=24  Identities=33%  Similarity=0.628  Sum_probs=11.0

Q ss_pred             ceeCC--ccCcccCCHHHHHHHhhhc
Q psy4574         282 PHCCE--ICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       282 ~~~C~--~C~~~f~~~~~l~~H~~~h  305 (343)
                      +|.|.  .|++.|...+.|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            34444  4444444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.71  E-value=1.8e-05  Score=40.60  Aligned_cols=27  Identities=30%  Similarity=0.543  Sum_probs=24.6

Q ss_pred             CcccCC--CCcccccCchhHHhHHhhcCC
Q psy4574         309 TSHTCH--LCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       309 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ++|.|+  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.62  E-value=9.2e-05  Score=46.39  Aligned_cols=49  Identities=16%  Similarity=0.295  Sum_probs=33.2

Q ss_pred             cccccccChhHHHHHHHHhcCCCC------ccccc--ccccccCChHHHHHHhhhhc
Q psy4574          40 SCGLLSGSITQTYIHYLECKNRGK------LYECS--LCNESFENKKVLFRHLRGKH   88 (343)
Q Consensus        40 ~C~~~~~~~~~l~~H~~~~h~~~~------~~~C~--~C~~~~~~~~~l~~H~~~~~   88 (343)
                      .|++.|.+...|..|+...|.+.+      .|.|.  .|+..+.....|..|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            377778877778778666776544      56664  57777766677777766543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.96  E-value=0.0039  Score=47.69  Aligned_cols=77  Identities=16%  Similarity=0.292  Sum_probs=43.9

Q ss_pred             cccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         259 ICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       259 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      .|+.... ...+..|+. .-.-+++.|+.|+..+ ....|..|+......+.-.|+.|+..+ ....|..|.....|+.+
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHTTCCC---
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHHhCcChhh
Confidence            4544332 334455542 2233556777777666 555677777666666667777777766 34557777777666654


Q ss_pred             C
Q psy4574         339 P  339 (343)
Q Consensus       339 ~  339 (343)
                      +
T Consensus       165 ~  165 (170)
T 3hcs_A          165 H  165 (170)
T ss_dssp             -
T ss_pred             h
Confidence            3

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.82  E-value=0.00085  Score=51.41  Aligned_cols=108  Identities=14%  Similarity=0.224  Sum_probs=75.6

Q ss_pred             cccccccccCCchHHHhHHHhhccchhHHHHhhhcCCcccc--CccCccccchhHHHHHHhhhcCCCCcccccccccCCC
Q psy4574         189 QCYYCRKTYCHKPNLTNHIQNVHLKSELEKRTAILKREFIC--DVCGKSYVRKGALTEHHQREHQGKKPVCTICGKMLID  266 (343)
Q Consensus       189 ~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~C~~C~~~f~~  266 (343)
                      .|+.|...+.....+..-.          ......+-...|  ..|+... ....+..|. ..=.-.+..|+.|+..+ .
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~----------~~~~i~~l~v~C~n~GC~~~~-~~~~l~~H~-~~C~~~~v~C~~C~~~~-~  121 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNF----------AKREILSLMVKCPNEGCLHKM-ELRHLEDHQ-AHCEFALMDCPQCQRPF-Q  121 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHH----------HHHHHHTSEEECCSTTCCCEE-EGGGHHHHH-TTCTTSEEECTTTCCEE-E
T ss_pred             CCCCCccCcchhhhhhhHH----------HHHHHhhcccCCCCCCCCcee-cHhHHHHHH-hcCCceeeECCCCChHH-H
Confidence            9999988776543222111          123344566788  4688765 466788886 44344445899999887 7


Q ss_pred             hHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCCCc
Q psy4574         267 KRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS  310 (343)
Q Consensus       267 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  310 (343)
                      +..|..|+...-..++..|..|+..+ ....|..|..++.|+.+
T Consensus       122 r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          122 KFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQNCPLALE  164 (170)
T ss_dssp             GGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHTTCCC---
T ss_pred             HHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHHhCcChhh
Confidence            78899999887888899999999987 45678999998887754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.62  E-value=0.0022  Score=46.24  Aligned_cols=76  Identities=21%  Similarity=0.362  Sum_probs=48.9

Q ss_pred             ccccccCcccccccChhHHHHHHH-HhcCCC-Cccccccccc-------ccCChHHHHHHhhhhcCCcccccCCCCcccc
Q psy4574          33 WDEERCRSCGLLSGSITQTYIHYL-ECKNRG-KLYECSLCNE-------SFENKKVLFRHLRGKHGMKIKLSRHKTKCVC  103 (343)
Q Consensus        33 ~~~~~C~~C~~~~~~~~~l~~H~~-~~h~~~-~~~~C~~C~~-------~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C  103 (343)
                      ..++.|.+|+..|.+...+..|+. +.|... +.+.+. ++.       .+...           + ..........|.|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~C   96 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGEDSVPAKKFKAA-----------P-AEISDGEDRSKCC   96 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCCCCSCCCCSCC-----------S-SCCSSCCCTTTEE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCcccCCCCCccCCC-----------c-cccccCCCCCeEc
Confidence            467899999999999999999964 345332 223221 111       11100           0 0011223556789


Q ss_pred             ccccccccChHHHHHHHH
Q psy4574         104 HYCNRTFDSKAKIQEHII  121 (343)
Q Consensus       104 ~~C~~~f~~~~~l~~H~~  121 (343)
                      .+|++.|.+...+..|+.
T Consensus        97 ~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           97 PVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTTTEECSSHHHHHHHHT
T ss_pred             CCCCCEeCCHHHHHHHHC
Confidence            999999999999999984

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.52  E-value=0.0024  Score=46.09  Aligned_cols=74  Identities=19%  Similarity=0.395  Sum_probs=50.4

Q ss_pred             CCcccccccccCCChHHHHHHH--HhhcCC-CceeCCcc-------CcccCCHHHHHHHhhhcCCCCcccCCCCcccccC
Q psy4574         253 KKPVCTICGKMLIDKRSLANHM--NTHTGL-KPHCCEIC-------GRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQ  322 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  322 (343)
                      .++.|.+|+..|.+...+..|.  +.|... +.|.+ .+       +..+...    .+...+.+...|.|.+|++.|.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA-INQGEDSVPAKKFKAA----PAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH-HTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc-ccCcccCCCCCccCCC----ccccccCCCCCeEcCCCCCEeCC
Confidence            5568999999999999999998  345321 22322 11       1222211    12234555678899999999999


Q ss_pred             chhHHhHHh
Q psy4574         323 RSSYTLHYK  331 (343)
Q Consensus       323 ~~~l~~H~~  331 (343)
                      ...|..|+.
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999985

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=96.48  E-value=0.002  Score=33.96  Aligned_cols=28  Identities=25%  Similarity=0.437  Sum_probs=23.5

Q ss_pred             ccccCcccccccChhHHHHHHHHhcCCC
Q psy4574          35 EERCRSCGLLSGSITQTYIHYLECKNRG   62 (343)
Q Consensus        35 ~~~C~~C~~~~~~~~~l~~H~~~~h~~~   62 (343)
                      .|.||+|.+.|.+...|..|+...|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            4889999999999999999988888653

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.17  E-value=0.0014  Score=46.35  Aligned_cols=29  Identities=28%  Similarity=0.481  Sum_probs=24.3

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhh
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      .++|+++|.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            36778889999999999999999999754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.88  E-value=0.0058  Score=34.37  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=15.1

Q ss_pred             CceeCCccCcccCCHHHHHHHhh
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            44666666666666666666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.83  E-value=0.0019  Score=45.67  Aligned_cols=33  Identities=18%  Similarity=0.432  Sum_probs=29.2

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhc
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      +...|.|+++|.|..|++.|.+.+.|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            445688899999999999999999999999864

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.66  E-value=0.0065  Score=32.00  Aligned_cols=26  Identities=19%  Similarity=0.452  Sum_probs=19.9

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      |.||+|.+.|.+...|..|....|..
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            67888888888888888888777654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.66  E-value=0.026  Score=31.78  Aligned_cols=29  Identities=21%  Similarity=0.374  Sum_probs=25.3

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      .+|.|+.|+..|.....|+.|++--=|+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~   39 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEM   39 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcch
Confidence            57899999999999999999998665554

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=90.95  E-value=0.45  Score=27.54  Aligned_cols=46  Identities=15%  Similarity=0.221  Sum_probs=28.2

Q ss_pred             cccCcccccccChhHHHHHHHHhcCCCCcccccccc-cccCChHHHHHHhh
Q psy4574          36 ERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCN-ESFENKKVLFRHLR   85 (343)
Q Consensus        36 ~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~-~~~~~~~~l~~H~~   85 (343)
                      ..|++|.....+...|..| ...-..   -+||+|- ..-.+...|..|.+
T Consensus         4 mvC~~C~~ECET~kEl~~H-~~sCp~---gqCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESH-RQSCIN---GQCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHH-HHHHTT---TBCTTTCCBCCSSHHHHHHHHT
T ss_pred             chhhHHHhhhhhHHHHHHH-hccCCC---CCCCcccCcCCcCHHHHHHHHH
Confidence            4577777777777777777 333322   2466663 34466666666654

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=89.28  E-value=0.17  Score=28.33  Aligned_cols=31  Identities=19%  Similarity=0.462  Sum_probs=18.9

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccc
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKF  320 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  320 (343)
                      .|.|..||+.|+.... .    .-   .-.+||+||+.-
T Consensus         3 iY~C~rCg~~fs~~el-~----~l---P~IrCpyCGyri   33 (48)
T 4ayb_P            3 VYRCGKCWKTFTDEQL-K----VL---PGVRCPYCGYKI   33 (48)
T ss_dssp             --CCCCTTTTCCCCCS-C----CC---SSSCCTTTCCSC
T ss_pred             EEEeeccCCCccHHHH-h----hC---CCcccCccCcEE
Confidence            4889999999876441 1    11   224699999753

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=88.32  E-value=0.063  Score=33.95  Aligned_cols=13  Identities=23%  Similarity=0.718  Sum_probs=8.3

Q ss_pred             CceeCCccCcccC
Q psy4574         281 KPHCCEICGRSYS  293 (343)
Q Consensus       281 ~~~~C~~C~~~f~  293 (343)
                      -.|+|+.||..|.
T Consensus        50 F~FkCP~CgEEFy   62 (95)
T 2k5c_A           50 FVFKCPVCGEEFY   62 (95)
T ss_dssp             SEEECTTTCCEEE
T ss_pred             HhhcCCCccHHHh
Confidence            3477777776663

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.20  E-value=0.47  Score=23.97  Aligned_cols=25  Identities=16%  Similarity=0.364  Sum_probs=21.5

Q ss_pred             ccCcccccccChhHHHHHHHHhcCC
Q psy4574          37 RCRSCGLLSGSITQTYIHYLECKNR   61 (343)
Q Consensus        37 ~C~~C~~~~~~~~~l~~H~~~~h~~   61 (343)
                      -|.+|.+.+....+|.+|+...|..
T Consensus        11 hcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4999999999999999998777743

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.30  E-value=0.33  Score=24.56  Aligned_cols=24  Identities=21%  Similarity=0.611  Sum_probs=19.2

Q ss_pred             cCCCCcccccCchhHHhHHhhcCC
Q psy4574         312 TCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .|..|.+.++.-.+|..|++..|-
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            488888888888888888886653

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.43  E-value=0.19  Score=32.12  Aligned_cols=27  Identities=26%  Similarity=0.472  Sum_probs=21.4

Q ss_pred             cccCCCCccccc-------CchhHHhHHhhcCCC
Q psy4574         310 SHTCHLCPQKFR-------QRSSYTLHYKTHHPG  336 (343)
Q Consensus       310 ~~~C~~C~~~f~-------~~~~l~~H~~~~h~~  336 (343)
                      .-.|.+|++.+.       ..+.|.+|++..|++
T Consensus        28 ~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~   61 (76)
T 2djr_A           28 YATCRLCGRQVSRGPGVNVGTTALWKHLKSMHRE   61 (76)
T ss_dssp             CEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHH
T ss_pred             EEECCCCCCccCCCCCCCCchHHHHHHHHHHCHH
Confidence            457888887776       478899999988876

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.38  E-value=0.72  Score=24.29  Aligned_cols=22  Identities=23%  Similarity=0.511  Sum_probs=12.3

Q ss_pred             cccCCCCcccccCchhHHhHHh
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYK  331 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~  331 (343)
                      .+.|..|+..|.+-.++..|.+
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHH
T ss_pred             cCeeccccceehhhHHHhhhhe
Confidence            3455555555555555555543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=84.15  E-value=0.3  Score=27.70  Aligned_cols=12  Identities=33%  Similarity=0.941  Sum_probs=7.1

Q ss_pred             cccCCcCccccc
Q psy4574         129 LYQCDFCGSQQR  140 (343)
Q Consensus       129 ~~~C~~C~~~~~  140 (343)
                      .|+|..||+.+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            356666666554

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=82.72  E-value=1  Score=22.42  Aligned_cols=20  Identities=25%  Similarity=0.678  Sum_probs=13.6

Q ss_pred             eeCCccCcccCCHHHHHHHh
Q psy4574         283 HCCEICGRSYSTAAYLKVHM  302 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~  302 (343)
                      |.|++|.....+...|..|.
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~   23 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHV   23 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHH
Confidence            56777777767766666664

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=81.76  E-value=0.55  Score=29.88  Aligned_cols=38  Identities=24%  Similarity=0.485  Sum_probs=17.1

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccccc
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFR  321 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  321 (343)
                      |.|..||..+ .+..|..|...=.+...|.|=.|+..|.
T Consensus        11 F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeC
Confidence            4455555443 3334455543333333445555555554

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=81.73  E-value=2.2  Score=24.70  Aligned_cols=44  Identities=27%  Similarity=0.495  Sum_probs=25.4

Q ss_pred             cccccccccCChHHHHHHhhhhcCCcccccCCCCccccccccc-cccChHHHHHHH
Q psy4574          66 ECSLCNESFENKKVLFRHLRGKHGMKIKLSRHKTKCVCHYCNR-TFDSKAKIQEHI  120 (343)
Q Consensus        66 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~C~~C~~-~f~~~~~l~~H~  120 (343)
                      .|.+|.........|..|...-...           .|+.|-. .-.+...|+.|.
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g-----------qCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING-----------QCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT-----------BCTTTCCBCCSSHHHHHHHH
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC-----------CCCcccCcCCcCHHHHHHHH
Confidence            4666666666666666666555443           4666643 334566666665

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.36  E-value=2.1  Score=22.53  Aligned_cols=23  Identities=17%  Similarity=0.368  Sum_probs=14.8

Q ss_pred             CceeCCccCcccCCHHHHHHHhh
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      ..+.|..|+-.|..-.++..|.+
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            44566666666666666666654

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=81.33  E-value=0.87  Score=30.84  Aligned_cols=12  Identities=42%  Similarity=1.010  Sum_probs=7.7

Q ss_pred             CceeCCccCccc
Q psy4574         281 KPHCCEICGRSY  292 (343)
Q Consensus       281 ~~~~C~~C~~~f  292 (343)
                      .||+|..||+.|
T Consensus        66 ~p~~C~~CG~~F   77 (105)
T 2gmg_A           66 KPAQCRKCGFVF   77 (105)
T ss_dssp             CCCBBTTTCCBC
T ss_pred             ECcChhhCcCee
Confidence            456666666666

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.07  E-value=0.65  Score=30.29  Aligned_cols=23  Identities=35%  Similarity=0.593  Sum_probs=12.8

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ..|-+||+.|.   .|.+|++++|+-
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCS
T ss_pred             eEecccchhhH---HHHHHHHHccCC
Confidence            35666666654   355666665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	343
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 3e-06
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           H+G KP+ C  CG+++S ++ L  H   HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 3e-06
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 271 ANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
                     + + C+ CG+S+S ++ L  H   HTGE
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-05
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           THTG KP+ C  C +++     L +H   +   
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHH 334
           HTGE  + C  C + FRQ+    +H+K +H
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 8e-05
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH 333
           K + C+ CG+S++  +    HMS H G   + C +C +KF+ +     H K H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 15/46 (32%), Positives = 18/46 (39%)

Query: 232 CGKSYVRKGALTEHHQREHQGKKPVCTICGKMLIDKRSLANHMNTH 277
           CGKS+  K     H       +   C +CGK    K  L  HM  H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 17/46 (36%), Positives = 24/46 (52%)

Query: 260 CGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH 305
           CGK    K     HM+ H GL+P+ C +CG+ +    +L  HM  H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGETS 310
            +G +P  C IC  +++T A    H+  HT   S
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           TH+G KP+ C IC   ++ +  +K+H+     E
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 281 KPHCCEICGRSYSTAAYLKVHM-SCHTGETSHTCHL 315
           KP+ C+ CG+ +S   +L  H+   HT E  H C +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 7e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 227 FICDVCGKSYVRKGALTEHHQREHQGKKP 255
           +IC  CGK + R   L  H ++ H  ++P
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 252 GKKPVCTICGKMLIDKRSLANHM-NTHTGLKPHCCEI 287
           GK  +C  CGK       L  H+   HT  +PH C++
Sbjct: 3   GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTG 307
                TG+KP  C  C RS+S + +L +H   H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           +   CE+C R+++   +LK H   HT E
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 6/28 (21%), Positives = 12/28 (42%)

Query: 281 KPHCCEICGRSYSTAAYLKVHMSCHTGE 308
           K   C  C + +  + +L  H+  H  +
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNK 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	343
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.54
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.2
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.12
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.06
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.06
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.03
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.95
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.94
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.89
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.87
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.84
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.74
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.73
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.72
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.7
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.62
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.62
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.55
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.54
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.48
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.47
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.4
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.31
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.24
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.23
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.23
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.22
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.2
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	98.04
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.84
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.75
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.73
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.65
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.59
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.53
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.51
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.49
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.43
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.39
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.37
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.28
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.24
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.24
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.21
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.21
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.12
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.0
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.98
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.77
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.76
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.75
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.72
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.71
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.68
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.46
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.38
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.25
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.23
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.15
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.09
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.06
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.05
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.95
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.85
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.82
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.77
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.61
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.33
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.17
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.05
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.83
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.61
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	94.0
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	93.92
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.36
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.85
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.7
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.25
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.09
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.92
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.34
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.67
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.57
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	90.41
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.62
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.47
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.43
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.15
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.95
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.9
d2ghfa1	58	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.92
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	86.19
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.69
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.14
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	84.99
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	84.84
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.91
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.68

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=6.1e-17  Score=97.49  Aligned_cols=53  Identities=32%  Similarity=0.591  Sum_probs=48.0

Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCcccccCchhHHhHHhhc
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      ++||+|. ||++|....+|..|+++|.+++||.|++||+.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789995 9999999999999999999999999999999999999999998876

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.9e-15  Score=90.00  Aligned_cols=52  Identities=37%  Similarity=0.710  Sum_probs=48.9

Q ss_pred             CCcccccccccCCChHHHHHHHHhhcCCCceeCCccCcccCCHHHHHHHhhhc
Q psy4574         253 KKPVCTICGKMLIDKRSLANHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       253 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      ++|.| .||+.|.....|..|+++|+|++||.|.+||++|...+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            57799 59999999999999999999999999999999999999999999887

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=5.8e-12  Score=68.33  Aligned_cols=37  Identities=35%  Similarity=0.727  Sum_probs=31.9

Q ss_pred             CCCceeCCccCcccCCHHHHHHHhh-hcCCCCcccCCC
Q psy4574         279 GLKPHCCEICGRSYSTAAYLKVHMS-CHTGETSHTCHL  315 (343)
Q Consensus       279 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  315 (343)
                      .++||+|.+||++|...++|..|++ +|.+++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3588999999999999999999985 799999999864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=5.2e-12  Score=68.76  Aligned_cols=36  Identities=19%  Similarity=0.311  Sum_probs=21.3

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      |+++|.+++||.|++||+.|...++|..|+++|.|+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            555556666666666666666666666666655553

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.7e-11  Score=63.71  Aligned_cols=32  Identities=44%  Similarity=0.829  Sum_probs=20.0

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      |+|++||+|..||++|...+.|..|+++|.|+
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55666666666666666666666666666553

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=7e-12  Score=68.25  Aligned_cols=37  Identities=30%  Similarity=0.496  Sum_probs=34.3

Q ss_pred             HHHHhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         272 NHMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       272 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +|+++|++++||+|.+||++|...++|..|+++|.|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3678899999999999999999999999999999885

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.4e-11  Score=65.04  Aligned_cols=32  Identities=31%  Similarity=0.653  Sum_probs=17.8

Q ss_pred             hhcCCCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         276 THTGLKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       276 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      +|+|++||+|.+||++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555544

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=2.4e-11  Score=65.57  Aligned_cols=34  Identities=35%  Similarity=0.616  Sum_probs=20.1

Q ss_pred             HHHhhcCCCceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         273 HMNTHTGLKPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       273 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      |.++|+|++||+|.+|+++|...++|..|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            3455666666666666666666666666665553

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.3e-11  Score=64.06  Aligned_cols=35  Identities=34%  Similarity=0.668  Sum_probs=32.6

Q ss_pred             hhcCCCCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         303 SCHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       303 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      ++|.|++||.|.+||+.|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57999999999999999999999999999999763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.8e-11  Score=62.39  Aligned_cols=33  Identities=27%  Similarity=0.493  Sum_probs=31.3

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +|.+++||.|..||+.|...+.|..|+++|.++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            589999999999999999999999999999875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=4.6e-11  Score=63.79  Aligned_cols=33  Identities=27%  Similarity=0.641  Sum_probs=20.2

Q ss_pred             hcCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         304 CHTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       304 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +|.|++||+|++|++.|+.+++|..|++.+|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            456666666666666666666666666555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.03  E-value=4.3e-11  Score=64.54  Aligned_cols=34  Identities=26%  Similarity=0.465  Sum_probs=32.2

Q ss_pred             HhhhcCCCCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         301 HMSCHTGETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       301 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |.++|.+++||+|++|++.|..++.|..|+++|-
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            6789999999999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=9.8e-11  Score=61.69  Aligned_cols=31  Identities=32%  Similarity=0.680  Sum_probs=20.2

Q ss_pred             hcCCCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         277 HTGLKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       277 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |+|++||+|.+|++.|...++|.+|+++|.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            4566666666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.3e-10  Score=61.97  Aligned_cols=34  Identities=32%  Similarity=0.613  Sum_probs=29.9

Q ss_pred             HhhcCCCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         275 NTHTGLKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       275 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      ++|+|++||+|++|+++|...++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4699999999999999999999999998665543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.95  E-value=2.6e-10  Score=57.45  Aligned_cols=28  Identities=36%  Similarity=0.767  Sum_probs=15.4

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +||.|++|+++|...+.|.+|+++|.|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            3555555555555555555555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.8e-10  Score=61.60  Aligned_cols=37  Identities=16%  Similarity=0.222  Sum_probs=33.3

Q ss_pred             ccccccCcccccccChhHHHHHHHHhcCCCCcccccc
Q psy4574          33 WDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSL   69 (343)
Q Consensus        33 ~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~   69 (343)
                      ++||.|++||+.|.....|..|++..|++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5899999999999999999999777899999999864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.9e-10  Score=59.83  Aligned_cols=32  Identities=22%  Similarity=0.580  Sum_probs=29.8

Q ss_pred             cCCCCcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         305 HTGETSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       305 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      |.|++||+|++|++.|..+++|..|+++|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67999999999999999999999999998764

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.1e-10  Score=56.96  Aligned_cols=26  Identities=42%  Similarity=0.819  Sum_probs=14.4

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||+|.+|+++|...+.|..|+++|.
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            45555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1.9e-10  Score=57.16  Aligned_cols=28  Identities=25%  Similarity=0.626  Sum_probs=26.5

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ++||+|++|++.|...+.|..|+++|.|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999975

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.89  E-value=4.3e-10  Score=56.61  Aligned_cols=29  Identities=24%  Similarity=0.643  Sum_probs=27.4

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +||+|++|++.|...+.|..|+++|.|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999874

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=5.7e-10  Score=56.01  Aligned_cols=27  Identities=19%  Similarity=0.503  Sum_probs=12.8

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      ||.|.+|+++|...+.|..|+++|.|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            444444444444444444444444443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.7e-10  Score=55.52  Aligned_cols=29  Identities=28%  Similarity=0.603  Sum_probs=27.3

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +||.|++||+.|...+.|..|+++|.+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=3.5e-10  Score=64.24  Aligned_cols=40  Identities=18%  Similarity=0.411  Sum_probs=27.7

Q ss_pred             HHHHHhhhcCCCCcccCCC--CcccccCchhHHhHHhhcCCCC
Q psy4574         297 YLKVHMSCHTGETSHTCHL--CPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       297 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      .|..|+. |.+++||.|++  |++.|...+.|..|+++|.+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4455553 77777777766  7777777777777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.3e-09  Score=56.83  Aligned_cols=32  Identities=31%  Similarity=0.658  Sum_probs=22.5

Q ss_pred             eeCCc--cCcccCCHHHHHHHhhhcCCCCcccCC
Q psy4574         283 HCCEI--CGRSYSTAAYLKVHMSCHTGETSHTCH  314 (343)
Q Consensus       283 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  314 (343)
                      |.|+.  |+++|.....|.+|+++|.|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777777777775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=3e-10  Score=64.55  Aligned_cols=40  Identities=15%  Similarity=0.370  Sum_probs=34.6

Q ss_pred             HHHHHHHhhcCCCceeCCc--cCcccCCHHHHHHHhhhcCCCC
Q psy4574         269 SLANHMNTHTGLKPHCCEI--CGRSYSTAAYLKVHMSCHTGET  309 (343)
Q Consensus       269 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  309 (343)
                      .+..|+. |.+++||.|.+  |+++|...+.|..|+++|.|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4455664 89999999988  9999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.7e-09  Score=51.41  Aligned_cols=25  Identities=36%  Similarity=0.630  Sum_probs=12.8

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      +||+|..||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3455555555555555555555444

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.8e-09  Score=51.39  Aligned_cols=26  Identities=27%  Similarity=0.476  Sum_probs=24.4

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +||+|+.||+.|...+.|..|.|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999873

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=1.2e-08  Score=51.32  Aligned_cols=26  Identities=50%  Similarity=0.984  Sum_probs=12.3

Q ss_pred             ceeCCc--cCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEI--CGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||.|.+  |+++|...+.|.+|+++|.|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444444  44444444444444444443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=9.5e-09  Score=51.77  Aligned_cols=28  Identities=18%  Similarity=0.591  Sum_probs=26.4

Q ss_pred             CcccCCC--CcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +||.|++  |++.|...+.|..|+++|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899998  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.6e-08  Score=51.05  Aligned_cols=26  Identities=38%  Similarity=0.874  Sum_probs=12.9

Q ss_pred             ceeCCc--cCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEI--CGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ||.|++  |+++|...+.|.+|+++|.|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555554443

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.2e-08  Score=51.53  Aligned_cols=28  Identities=18%  Similarity=0.482  Sum_probs=26.1

Q ss_pred             CcccCCC--CcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +||.|++  |++.|...+.|..|+|+|.|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899988  999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.3e-08  Score=52.26  Aligned_cols=32  Identities=31%  Similarity=0.716  Sum_probs=24.0

Q ss_pred             ccccc--cccccCCHHHHHHHHHHhCCCCccccc
Q psy4574         160 LSCEF--CSRIFTKKELLRSHLAVHKIGKNYQCY  191 (343)
Q Consensus       160 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  191 (343)
                      |.|+.  |++.|...+.|++|+++|.+++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            45655  777777777777777777777777775

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=6.4e-08  Score=49.23  Aligned_cols=27  Identities=37%  Similarity=0.845  Sum_probs=13.6

Q ss_pred             ceeCC--ccCcccCCHHHHHHHhhhcCCC
Q psy4574         282 PHCCE--ICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       282 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      ||.|+  .|+++|...+.|.+|+++|.|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  2555555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.9e-08  Score=48.67  Aligned_cols=29  Identities=21%  Similarity=0.485  Sum_probs=26.3

Q ss_pred             CcccCC--CCcccccCchhHHhHHhhcCCCC
Q psy4574         309 TSHTCH--LCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       309 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +||.|+  .|++.|...+.|..|+++|.+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589996  59999999999999999999874

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.35  E-value=1.7e-07  Score=47.85  Aligned_cols=26  Identities=23%  Similarity=0.594  Sum_probs=13.3

Q ss_pred             CceeCCc--cCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEI--CGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||.|.+  |+++|...+.|.+|+++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4555544  5555555555555555544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=1.2e-07  Score=47.22  Aligned_cols=26  Identities=38%  Similarity=0.825  Sum_probs=13.3

Q ss_pred             CceeCCc--cCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEI--CGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||.|.+  |+++|...+.|.+|+++|.
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            3455544  5555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.31  E-value=2.4e-07  Score=47.28  Aligned_cols=29  Identities=21%  Similarity=0.490  Sum_probs=26.7

Q ss_pred             CCcccCCC--CcccccCchhHHhHHhhcCCC
Q psy4574         308 ETSHTCHL--CPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       308 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ++||.|++  |++.|+..+.|.+|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57999988  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=9.2e-08  Score=47.60  Aligned_cols=27  Identities=22%  Similarity=0.584  Sum_probs=25.0

Q ss_pred             CcccCCC--CcccccCchhHHhHHhhcCC
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +||.|++  |++.|...+.|..|+++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.2e-07  Score=41.58  Aligned_cols=23  Identities=22%  Similarity=0.674  Sum_probs=11.3

Q ss_pred             cCCCCcccccCchhHHhHHhhcC
Q psy4574         312 TCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +|+.|++.|+.++.|..|+|.|.
T Consensus         3 kc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             ccchhhhHhcchhHHHHHhhccC
Confidence            44555555555555555554443

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.3e-07  Score=43.68  Aligned_cols=30  Identities=23%  Similarity=0.665  Sum_probs=19.0

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      ++||.|++|...|..++.+..|+|+|-|++
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~v   30 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSV   30 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCcc
Confidence            356666666666666666666666666553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.6e-07  Score=42.54  Aligned_cols=28  Identities=29%  Similarity=0.669  Sum_probs=16.1

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +||+|..|.+.....+.|..|+|.|.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4555555555555555566666555543

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=5.5e-07  Score=40.81  Aligned_cols=26  Identities=58%  Similarity=1.256  Sum_probs=21.3

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |.+|.+|++.|+.+..|..|++.|.|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46788888888888888888888764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=2.6e-07  Score=45.35  Aligned_cols=24  Identities=33%  Similarity=0.652  Sum_probs=13.4

Q ss_pred             cccCCC--CcccccCchhHHhHHhhc
Q psy4574         310 SHTCHL--CPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       310 ~~~C~~--C~~~f~~~~~l~~H~~~~  333 (343)
                      ||.|+.  ||+.|...++|..|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455554  555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=7.3e-07  Score=41.91  Aligned_cols=27  Identities=37%  Similarity=0.762  Sum_probs=20.1

Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      ++||.|.+||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            467777777777777777777777763

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=2.7e-07  Score=45.30  Aligned_cols=26  Identities=27%  Similarity=0.769  Sum_probs=22.1

Q ss_pred             CceeCCc--cCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEI--CGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||.|+.  |+++|...++|.+|+++|.
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5888888  9999999999999988873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=1.1e-06  Score=41.85  Aligned_cols=29  Identities=28%  Similarity=0.693  Sum_probs=22.0

Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      ++||.|++|+..|..+..+..|+++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46788888888888888888888777654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.5e-06  Score=40.86  Aligned_cols=29  Identities=24%  Similarity=0.431  Sum_probs=25.2

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      +||+|.+|.+.....++|..|+++.|+..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            57899999999999999999999988864

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.4e-06  Score=39.73  Aligned_cols=28  Identities=36%  Similarity=0.728  Sum_probs=25.1

Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ++||+|..|.++-.+.++|..|++.|.|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4789999999999999999999999876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.4e-06  Score=41.18  Aligned_cols=30  Identities=33%  Similarity=0.649  Sum_probs=21.2

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcCCCCcc
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHTGETSH  311 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  311 (343)
                      ...|.+||+.|.....|.+|..+|.+++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            356777777777777777777777777766

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=4.1e-06  Score=39.33  Aligned_cols=27  Identities=30%  Similarity=0.608  Sum_probs=24.8

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      ++||.|.+||+.|+....-.+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998873

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=5.8e-06  Score=39.43  Aligned_cols=26  Identities=27%  Similarity=0.714  Sum_probs=15.2

Q ss_pred             CceeCCc--cCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEI--CGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||.|.+  |+++|..+++|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            3566655  5566666666666665443

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=6.4e-06  Score=38.56  Aligned_cols=26  Identities=23%  Similarity=0.373  Sum_probs=21.6

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      |.|++||.....++.|..|+|+|.++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67888888888888888888888765

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=9.8e-06  Score=41.95  Aligned_cols=26  Identities=31%  Similarity=0.712  Sum_probs=22.2

Q ss_pred             cCCCceeCCccCcccCCHHHHHHHhh
Q psy4574         278 TGLKPHCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       278 ~~~~~~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      +|.+||.|.+|++.|.+.+++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            36789999999999999999999863

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=9.2e-06  Score=38.73  Aligned_cols=27  Identities=33%  Similarity=0.620  Sum_probs=24.9

Q ss_pred             CcccCCC--CcccccCchhHHhHHhhcCC
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  335 (343)
                      +||.|.+  |++.+..+++|+.|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5899977  99999999999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.7e-05  Score=36.62  Aligned_cols=26  Identities=42%  Similarity=0.866  Sum_probs=17.1

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCCC
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      ..|..||++|...+.|.+|..+|.++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45666777777777777776666653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=8.6e-06  Score=38.21  Aligned_cols=28  Identities=25%  Similarity=0.489  Sum_probs=20.6

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +||+|..|......+++|..|++.-|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            3677777777777777777777777664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=3e-05  Score=35.68  Aligned_cols=26  Identities=27%  Similarity=0.591  Sum_probs=17.5

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      +||+|..|+++....++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56677777766666667777766664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.53  E-value=4.4e-05  Score=34.03  Aligned_cols=23  Identities=30%  Similarity=0.602  Sum_probs=12.2

Q ss_pred             eeCCccCcccCCHHHHHHHhhhc
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h  305 (343)
                      |+|..|.++|-.++.|.+|+++|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            44555555555555555555544

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=2.8e-05  Score=35.29  Aligned_cols=25  Identities=24%  Similarity=0.542  Sum_probs=18.6

Q ss_pred             cCCCCcccccCchhHHhHHhhcCCC
Q psy4574         312 TCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      +|+.|.+.|.++.-|..|-|.|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5777777777777777777777765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.51  E-value=4e-05  Score=36.81  Aligned_cols=21  Identities=29%  Similarity=0.702  Sum_probs=13.6

Q ss_pred             ceeCCccCcccCCHHHHHHHh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHM  302 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~  302 (343)
                      ||.|.+|++.|.....|.+|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            466666666666666666665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=5.4e-05  Score=35.50  Aligned_cols=27  Identities=19%  Similarity=0.434  Sum_probs=15.4

Q ss_pred             ccccCccCccccchhHHHHHHhhhcCC
Q psy4574         226 EFICDVCGKSYVRKGALTEHHQREHQG  252 (343)
Q Consensus       226 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  252 (343)
                      ||.|+.|.+...+.++|+.|+...|+.
T Consensus         2 py~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             Cccccccccccccchhhhhhhhccccc
Confidence            555666666555666666665555543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=4.4e-05  Score=37.17  Aligned_cols=32  Identities=19%  Similarity=0.308  Sum_probs=29.2

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcCCCCCCC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHHPGVIPP  340 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  340 (343)
                      +..-|..||+.|..-..|.+|..+|.+++||+
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45679999999999999999999999999984

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4e-05  Score=35.24  Aligned_cols=26  Identities=23%  Similarity=0.416  Sum_probs=24.4

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      +||+|..|++.-...++|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.39  E-value=6.1e-05  Score=33.59  Aligned_cols=24  Identities=29%  Similarity=0.697  Sum_probs=22.3

Q ss_pred             ccCCCCcccccCchhHHhHHhhcC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      |+|+.|.+.|..++.|.+|.+.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.37  E-value=5e-05  Score=36.46  Aligned_cols=28  Identities=29%  Similarity=0.556  Sum_probs=25.8

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCCCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHPGV  337 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  337 (343)
                      ||.|.+|++.|+.++-|.+|.+.-|++.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999888864

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.28  E-value=0.00013  Score=37.64  Aligned_cols=25  Identities=32%  Similarity=0.650  Sum_probs=12.5

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      .|.|.+|++.|.+..+|=-|++.|.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCCCccCCcccccchHhhhc
Confidence            3455555555555555555554443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00011  Score=33.80  Aligned_cols=27  Identities=26%  Similarity=0.447  Sum_probs=24.2

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  336 (343)
                      .+.|..||+.|...+.|.+|...|.++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            357999999999999999999998875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=6.9e-05  Score=34.97  Aligned_cols=24  Identities=25%  Similarity=0.589  Sum_probs=18.4

Q ss_pred             cccCCCCcccccCchhHHhHHhhc
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      ||.|..|...|.++.+|..|+++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888888654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.21  E-value=0.00017  Score=32.67  Aligned_cols=25  Identities=36%  Similarity=0.583  Sum_probs=13.3

Q ss_pred             ccccccccCCChHHHHHHHHhhcCC
Q psy4574         256 VCTICGKMLIDKRSLANHMNTHTGL  280 (343)
Q Consensus       256 ~C~~C~~~f~~~~~l~~H~~~h~~~  280 (343)
                      +|+.|.+.|.++.-|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00022  Score=33.25  Aligned_cols=26  Identities=27%  Similarity=0.436  Sum_probs=16.2

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCC
Q psy4574         160 LSCEFCSRIFTKKELLRSHLAVHKIG  185 (343)
Q Consensus       160 ~~C~~C~~~f~~~~~l~~H~~~h~~~  185 (343)
                      |.|+.|+......+-|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45666666666666666666666554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.12  E-value=0.00027  Score=36.40  Aligned_cols=31  Identities=26%  Similarity=0.489  Sum_probs=27.3

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      .+.|.|.+|++.|.+..+|--|++.|..+.-
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3579999999999999999999998877653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00034  Score=32.58  Aligned_cols=25  Identities=32%  Similarity=0.616  Sum_probs=21.1

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      ||.|..|.++|..+.+|..||++..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6889999999999999999987643

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=0.00021  Score=36.86  Aligned_cols=26  Identities=27%  Similarity=0.676  Sum_probs=23.5

Q ss_pred             CCCcccCCCCcccccCchhHHhHHhh
Q psy4574         307 GETSHTCHLCPQKFRQRSSYTLHYKT  332 (343)
Q Consensus       307 ~~~~~~C~~C~~~f~~~~~l~~H~~~  332 (343)
                      |-+||.|.+|++.|-+++++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56899999999999999999999753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.98  E-value=0.00029  Score=32.72  Aligned_cols=24  Identities=33%  Similarity=0.642  Sum_probs=14.0

Q ss_pred             ceeCCc--cCcccCCHHHHHHHhhhc
Q psy4574         282 PHCCEI--CGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       282 ~~~C~~--C~~~f~~~~~l~~H~~~h  305 (343)
                      ||+|+.  |++.|+.++.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            555554  666666666666665554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00052  Score=31.85  Aligned_cols=26  Identities=31%  Similarity=0.761  Sum_probs=14.1

Q ss_pred             cccccccccccCChHHHHHHhhhhcC
Q psy4574          64 LYECSLCNESFENKKVLFRHLRGKHG   89 (343)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~H~~~~~~   89 (343)
                      .|.|..|...|..+-.|+.||.+|.+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            45555555555555555555555443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00041  Score=31.80  Aligned_cols=26  Identities=19%  Similarity=0.535  Sum_probs=21.2

Q ss_pred             cccCCCCcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .|+||.|+.....++.|..|++.-|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            47888888888888888888887664

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00046  Score=32.23  Aligned_cols=24  Identities=25%  Similarity=0.508  Sum_probs=20.3

Q ss_pred             CceeCCccCcccCCHHHHHHHhhh
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      +||+|..|.+...+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            588999999888889999998854

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.72  E-value=0.00061  Score=30.26  Aligned_cols=21  Identities=29%  Similarity=0.651  Sum_probs=15.2

Q ss_pred             ceeCCccCcccCCHHHHHHHh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHM  302 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~  302 (343)
                      ||+|+-|...|.++..|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            577777777777777777776

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.71  E-value=0.00047  Score=31.99  Aligned_cols=25  Identities=28%  Similarity=0.494  Sum_probs=22.3

Q ss_pred             CcccCCC--CcccccCchhHHhHHhhc
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~~~~  333 (343)
                      .||.|+.  |++.|+.++.|.+|-+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4899986  999999999999998765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.68  E-value=0.00091  Score=31.02  Aligned_cols=25  Identities=32%  Similarity=0.804  Sum_probs=12.3

Q ss_pred             eeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      |.|.+|...|...-.|+.||-+|.|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4455555555555555555544443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0011  Score=30.39  Aligned_cols=22  Identities=18%  Similarity=0.561  Sum_probs=12.1

Q ss_pred             cCCCCcccccCchhHHhHHhhc
Q psy4574         312 TCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       312 ~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      +|+.|.+..++++.|+.|-|.|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555555554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.38  E-value=0.001  Score=29.69  Aligned_cols=23  Identities=26%  Similarity=0.573  Sum_probs=12.2

Q ss_pred             ccCCCCcccccCchhHHhHHhhc
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      |.|+.|=+.|..++++..|+++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            44555555555555555555443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.00087  Score=32.07  Aligned_cols=21  Identities=33%  Similarity=0.672  Sum_probs=10.3

Q ss_pred             ceeCCc--cCcccCCHHHHHHHh
Q psy4574         282 PHCCEI--CGRSYSTAAYLKVHM  302 (343)
Q Consensus       282 ~~~C~~--C~~~f~~~~~l~~H~  302 (343)
                      ||.|..  |.++|++.+.-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            445544  555555544444444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.23  E-value=0.0019  Score=29.43  Aligned_cols=23  Identities=52%  Similarity=0.959  Sum_probs=17.3

Q ss_pred             ccccCccCccccchhHHHHHHhh
Q psy4574         226 EFICDVCGKSYVRKGALTEHHQR  248 (343)
Q Consensus       226 ~~~C~~C~~~f~~~~~l~~H~~~  248 (343)
                      ||.|..||+.+..+.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57788888888888888777643

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0031  Score=28.94  Aligned_cols=25  Identities=36%  Similarity=0.634  Sum_probs=17.6

Q ss_pred             ceeCCccCcccCCHHHHHHHhhhcC
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSCHT  306 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~h~  306 (343)
                      |-+|+.|.++.++++.|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4567777777777777777777664

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.09  E-value=0.0015  Score=30.41  Aligned_cols=26  Identities=27%  Similarity=0.442  Sum_probs=14.4

Q ss_pred             cccCCC--CcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCHL--CPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~~--C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ||.|..  |.++|.+.-.|.+|..+|.+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  55666666666666555544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.06  E-value=0.0023  Score=29.16  Aligned_cols=21  Identities=33%  Similarity=0.656  Sum_probs=13.4

Q ss_pred             ceeCCccCcccCCHHHHHHHh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHM  302 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~  302 (343)
                      ||+|..||+.|-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            466666666666666666664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.05  E-value=0.0024  Score=28.43  Aligned_cols=22  Identities=14%  Similarity=0.452  Sum_probs=19.9

Q ss_pred             eeCCccCcccCCHHHHHHHhhh
Q psy4574         283 HCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       283 ~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      |.|+.|-+.|..+.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7899999999999999999865

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.95  E-value=0.0027  Score=28.16  Aligned_cols=23  Identities=17%  Similarity=0.284  Sum_probs=13.2

Q ss_pred             ccccCcccccccChhHHHHHHHH
Q psy4574          35 EERCRSCGLLSGSITQTYIHYLE   57 (343)
Q Consensus        35 ~~~C~~C~~~~~~~~~l~~H~~~   57 (343)
                      ||.|.-|...|-...+|..|+.+
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            45566666666555666666443

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.92  E-value=0.0045  Score=28.74  Aligned_cols=25  Identities=28%  Similarity=0.596  Sum_probs=17.6

Q ss_pred             cccCccCccccchhHHHHHHhhhcC
Q psy4574         227 FICDVCGKSYVRKGALTEHHQREHQ  251 (343)
Q Consensus       227 ~~C~~C~~~f~~~~~l~~H~~~~h~  251 (343)
                      |.|..|++...+...++.|++..|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6677777777777777777665554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.0034  Score=31.91  Aligned_cols=26  Identities=35%  Similarity=0.645  Sum_probs=15.3

Q ss_pred             CCceeC--CccCcccCCHHHHHHHhhhc
Q psy4574         280 LKPHCC--EICGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       280 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  305 (343)
                      ++||.|  +-|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            466666  33666666666666665444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.82  E-value=0.0024  Score=29.68  Aligned_cols=28  Identities=36%  Similarity=0.692  Sum_probs=20.9

Q ss_pred             CceeCCc--cCcccCCHHHHHHHhhhcCCC
Q psy4574         281 KPHCCEI--CGRSYSTAAYLKVHMSCHTGE  308 (343)
Q Consensus       281 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  308 (343)
                      +||.|..  |.+.|.....|.+|..+|.|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4677765  888888888888887777653

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0027  Score=33.93  Aligned_cols=27  Identities=26%  Similarity=0.507  Sum_probs=22.7

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCC
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  307 (343)
                      ..|.|.+|++.|.....|+.|...|.-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            458899999999999999999877653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0039  Score=28.48  Aligned_cols=24  Identities=33%  Similarity=0.677  Sum_probs=16.5

Q ss_pred             cccCccCccccchhHHHHHHhhhc
Q psy4574         227 FICDVCGKSYVRKGALTEHHQREH  250 (343)
Q Consensus       227 ~~C~~C~~~f~~~~~l~~H~~~~h  250 (343)
                      |.||.|+.....+++|..|+...|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            567777777777777777765544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.61  E-value=0.0042  Score=30.44  Aligned_cols=32  Identities=22%  Similarity=0.440  Sum_probs=27.1

Q ss_pred             ccccccccCcccccccChhHHHHHHHHhcCCC
Q psy4574          31 DVWDEERCRSCGLLSGSITQTYIHYLECKNRG   62 (343)
Q Consensus        31 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~   62 (343)
                      +++..|+|.+|.+++.-.+.+..|+.++|..+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtSHk~n   35 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN   35 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSS
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhhcccC
Confidence            45667999999999999999999998888653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.33  E-value=0.0056  Score=31.06  Aligned_cols=21  Identities=19%  Similarity=0.324  Sum_probs=9.5

Q ss_pred             ccccc--CcccccccChhHHHHH
Q psy4574          34 DEERC--RSCGLLSGSITQTYIH   54 (343)
Q Consensus        34 ~~~~C--~~C~~~~~~~~~l~~H   54 (343)
                      +||.|  +-|+.+|.+...|..|
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vH   27 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVH   27 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHH
T ss_pred             CceecCCCCccccccchHHHHHh
Confidence            44444  2244444444444444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.0068  Score=32.35  Aligned_cols=26  Identities=23%  Similarity=0.437  Sum_probs=22.9

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhc
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      ...|.|..||+.|+....|++|-..|
T Consensus         4 ~~l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           4 AGILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             cceeeccccccccCCHHHHhHhHHhc
Confidence            34689999999999999999998765

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0067  Score=28.95  Aligned_cols=25  Identities=28%  Similarity=0.567  Sum_probs=21.8

Q ss_pred             CcccCCC--CcccccCchhHHhHH-hhc
Q psy4574         309 TSHTCHL--CPQKFRQRSSYTLHY-KTH  333 (343)
Q Consensus       309 ~~~~C~~--C~~~f~~~~~l~~H~-~~~  333 (343)
                      +||.|.+  |.+.|++.+.-..|. |+|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CCccccCCChhhhhcchhhhhhhccccc
Confidence            5899987  999999999999998 554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.012  Score=27.28  Aligned_cols=28  Identities=25%  Similarity=0.560  Sum_probs=19.5

Q ss_pred             ccCCCCcccccCchhHHhHHhhcCCCCC
Q psy4574         311 HTCHLCPQKFRQRSSYTLHYKTHHPGVI  338 (343)
Q Consensus       311 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~  338 (343)
                      |.|..||+...+...+..|+-..|+..|
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn~~p   30 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHNSLP   30 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             eechhHHHHHhhccCceEEEeecccCCc
Confidence            5677777777777777777776666543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.61  E-value=0.013  Score=28.21  Aligned_cols=25  Identities=36%  Similarity=0.626  Sum_probs=18.5

Q ss_pred             CCCCccccccccccCCHHHHHHHHH
Q psy4574         156 KPANLSCEFCSRIFTKKELLRSHLA  180 (343)
Q Consensus       156 ~~~~~~C~~C~~~f~~~~~l~~H~~  180 (343)
                      ++..|.|+-||..|.+.+.|..|+.
T Consensus         5 kparf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           5 KPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SCCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cccceeccccceeecChhHHHhhhh
Confidence            3556788888888888888877753

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.00  E-value=0.013  Score=28.72  Aligned_cols=28  Identities=29%  Similarity=0.679  Sum_probs=20.2

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhcCC
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      ...|+|.+|.+.+..-+++.+|.-+.|.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            4567788888887777888777765554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.01  Score=34.59  Aligned_cols=41  Identities=12%  Similarity=0.305  Sum_probs=29.8

Q ss_pred             cccccccccCcccccccChhHHHHHHHHhcCCCCccccccccccc
Q psy4574          30 SDVWDEERCRSCGLLSGSITQTYIHYLECKNRGKLYECSLCNESF   74 (343)
Q Consensus        30 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~h~~~~~~~C~~C~~~~   74 (343)
                      ....+.|.||.|+++|+...++.    ........|.|..|+-..
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~----L~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBC
T ss_pred             cccCCceECCCCCCCcchhhHHH----hcCcCCCeEEecCCCCEE
Confidence            34557799999999998877653    344555678999997654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.36  E-value=0.03  Score=26.94  Aligned_cols=23  Identities=26%  Similarity=0.584  Sum_probs=18.9

Q ss_pred             CceeCCccCcccCCHHHHHHHhh
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMS  303 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~  303 (343)
                      ..|.|.-||-.|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            34889999999999999998864

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.034  Score=27.04  Aligned_cols=23  Identities=17%  Similarity=0.582  Sum_probs=17.9

Q ss_pred             ceeCCccCcccCCHHHHHHHhhh
Q psy4574         282 PHCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       282 ~~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      .|.|..|++.|.....+.+|.-.
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            47788888888888888888643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.70  E-value=0.035  Score=27.46  Aligned_cols=24  Identities=29%  Similarity=0.362  Sum_probs=16.1

Q ss_pred             cccccccCCChHHHHHHHHhhcCC
Q psy4574         257 CTICGKMLIDKRSLANHMNTHTGL  280 (343)
Q Consensus       257 C~~C~~~f~~~~~l~~H~~~h~~~  280 (343)
                      |+.=++.|+....|..|++.|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444445577777777777777764

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.026  Score=27.91  Aligned_cols=20  Identities=15%  Similarity=0.330  Sum_probs=12.0

Q ss_pred             cccccCchhHHhHHhhcCCC
Q psy4574         317 PQKFRQRSSYTLHYKTHHPG  336 (343)
Q Consensus       317 ~~~f~~~~~l~~H~~~~h~~  336 (343)
                      ++.|+.+..|..|+|.|+++
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34566666666666666553

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=0.066  Score=26.00  Aligned_cols=26  Identities=27%  Similarity=0.667  Sum_probs=15.3

Q ss_pred             cccccccccccCChHHHHHHhhhhcC
Q psy4574          64 LYECSLCNESFENKKVLFRHLRGKHG   89 (343)
Q Consensus        64 ~~~C~~C~~~~~~~~~l~~H~~~~~~   89 (343)
                      .|.|..|++.|..+..+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            35566666666666666666554433

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.92  E-value=0.062  Score=24.58  Aligned_cols=18  Identities=39%  Similarity=0.750  Sum_probs=9.2

Q ss_pred             CcccccCchhHHhHHhhc
Q psy4574         316 CPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       316 C~~~f~~~~~l~~H~~~~  333 (343)
                      |++.|...++++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            455555555555555444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.34  E-value=0.084  Score=27.90  Aligned_cols=31  Identities=26%  Similarity=0.432  Sum_probs=20.8

Q ss_pred             CCCcccCCcCcccccchhHHHhHHhhccCCC
Q psy4574         126 HEKLYQCDFCGSQQRTKCRFYYHLRDKHLSK  156 (343)
Q Consensus       126 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~  156 (343)
                      .+.+-.|++|+.......+|++|+...|-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            3556677777777777777777776655443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.67  E-value=0.14  Score=27.08  Aligned_cols=29  Identities=17%  Similarity=0.305  Sum_probs=19.1

Q ss_pred             cCCccccCccCccccchhHHHHHHhhhcC
Q psy4574         223 LKREFICDVCGKSYVRKGALTEHHQREHQ  251 (343)
Q Consensus       223 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  251 (343)
                      .+.|-.|+.|+.......+|++|+..-|-
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            34566777777777777777777654443

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.57  E-value=0.059  Score=25.38  Aligned_cols=26  Identities=15%  Similarity=0.343  Sum_probs=14.0

Q ss_pred             cccCC--CCcccccCchhHHhHHhhcCC
Q psy4574         310 SHTCH--LCPQKFRQRSSYTLHYKTHHP  335 (343)
Q Consensus       310 ~~~C~--~C~~~f~~~~~l~~H~~~~h~  335 (343)
                      .|.|.  .|+..|+....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            34453  355555555556665555544

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.40  E-value=0.1  Score=24.51  Aligned_cols=26  Identities=38%  Similarity=0.754  Sum_probs=14.8

Q ss_pred             ceeCCc--cCcccCCHHHHHHHhhhcCC
Q psy4574         282 PHCCEI--CGRSYSTAAYLKVHMSCHTG  307 (343)
Q Consensus       282 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  307 (343)
                      .|.|+.  |+..|.....|..|+-.|.|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            355543  66666666666666655554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.62  E-value=0.11  Score=23.33  Aligned_cols=18  Identities=39%  Similarity=0.802  Sum_probs=11.1

Q ss_pred             cCcccCCHHHHHHHhhhc
Q psy4574         288 CGRSYSTAAYLKVHMSCH  305 (343)
Q Consensus       288 C~~~f~~~~~l~~H~~~h  305 (343)
                      |+++|....+|..|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            666666666666665554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.47  E-value=0.1  Score=29.82  Aligned_cols=26  Identities=23%  Similarity=0.562  Sum_probs=19.9

Q ss_pred             CcccCCCCcccccCchhHHhHHhhcC
Q psy4574         309 TSHTCHLCPQKFRQRSSYTLHYKTHH  334 (343)
Q Consensus       309 ~~~~C~~C~~~f~~~~~l~~H~~~~h  334 (343)
                      ..|+|..|+-.|.+...|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            45788888888888888888876654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.058  Score=31.94  Aligned_cols=24  Identities=29%  Similarity=0.576  Sum_probs=19.0

Q ss_pred             CceeCCccCcccCCHHHHHHHhhh
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSC  304 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~  304 (343)
                      ..|-|..|++.|.+..+|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            447888888888888888888754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.15  E-value=0.086  Score=30.57  Aligned_cols=36  Identities=11%  Similarity=0.418  Sum_probs=20.8

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      .-|.|+.|++.|+.-..+.   ..-.....|.|.+|+-.
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             CceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            3477777777776544332   23333456777777654

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=0.048  Score=32.29  Aligned_cols=26  Identities=19%  Similarity=0.562  Sum_probs=22.6

Q ss_pred             CCcccCCCCcccccCchhHHhHHhhc
Q psy4574         308 ETSHTCHLCPQKFRQRSSYTLHYKTH  333 (343)
Q Consensus       308 ~~~~~C~~C~~~f~~~~~l~~H~~~~  333 (343)
                      ...|-|..|++.|.+...|..|+++.
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCEEecccccCccCCHHHHHHHHccc
Confidence            34688999999999999999999753

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.90  E-value=0.16  Score=25.98  Aligned_cols=26  Identities=31%  Similarity=0.669  Sum_probs=17.7

Q ss_pred             CceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         281 KPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       281 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      +.|.|.+||..+.             ++.|-.||+|+..
T Consensus         4 ~~~~C~vCG~i~~-------------g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTAV-------------DEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEEE-------------SCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEec-------------CCCCCcCCCCCCc
Confidence            4578888887652             2346678888864

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=86.19  E-value=0.24  Score=25.06  Aligned_cols=27  Identities=37%  Similarity=0.704  Sum_probs=16.9

Q ss_pred             CCceeCCccCcccCCHHHHHHHhhhcCCCCcccCCCCccc
Q psy4574         280 LKPHCCEICGRSYSTAAYLKVHMSCHTGETSHTCHLCPQK  319 (343)
Q Consensus       280 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  319 (343)
                      ++.|.|.+||....             ++.|-.||+|+..
T Consensus         3 ~~~~vC~vCGyi~~-------------g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYIHK-------------GEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             CCEEECCCCCCEee-------------CCCCCcCCCCCCc
Confidence            34577888876542             2345568888754

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.69  E-value=0.24  Score=28.28  Aligned_cols=25  Identities=28%  Similarity=0.640  Sum_probs=21.6

Q ss_pred             CccccccccccCCHHHHHHHHHHhC
Q psy4574         159 NLSCEFCSRIFTKKELLRSHLAVHK  183 (343)
Q Consensus       159 ~~~C~~C~~~f~~~~~l~~H~~~h~  183 (343)
                      .|+|..|...|.+...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            3899999999999999999988874

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.14  E-value=0.48  Score=23.19  Aligned_cols=26  Identities=35%  Similarity=0.547  Sum_probs=19.9

Q ss_pred             cccccccccccChHHHHHHHHhcCCC
Q psy4574         101 CVCHYCNRTFDSKAKIQEHIISSHMH  126 (343)
Q Consensus       101 ~~C~~C~~~f~~~~~l~~H~~~~H~~  126 (343)
                      ..|-.|-..|.+...+++|+...|..
T Consensus         4 ltclecmrtfkssfsiwrhqvevhnq   29 (41)
T d1wjpa3           4 LTCLECMRTFKSSFSIWRHQVEVHNQ   29 (41)
T ss_dssp             GEEGGGTEECSSHHHHHHHHHHTSCC
T ss_pred             ccHHHHHHHHHHHHHHHHhhheeccc
Confidence            46778888888888888888777754

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.84  E-value=0.28  Score=23.49  Aligned_cols=22  Identities=36%  Similarity=0.711  Sum_probs=17.8

Q ss_pred             ccccccccChHHHHHHHHhcCC
Q psy4574         104 HYCNRTFDSKAKIQEHIISSHM  125 (343)
Q Consensus       104 ~~C~~~f~~~~~l~~H~~~~H~  125 (343)
                      ..|+..|.+..+|..|++..|.
T Consensus         7 ~~C~~eFdtQd~LV~HinndHI   28 (32)
T d2glia1           7 DGCSQEFDSQEQLVHHINSEHI   28 (32)
T ss_dssp             TTCCCBCSCHHHHHHHHHHHTS
T ss_pred             cccccccCCHHHHHHHcccccc
Confidence            5688888888888888877764

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.91  E-value=0.54  Score=21.54  Aligned_cols=24  Identities=33%  Similarity=0.755  Sum_probs=15.7

Q ss_pred             cccC--ccCccccchhHHHHHHhhhc
Q psy4574         227 FICD--VCGKSYVRKGALTEHHQREH  250 (343)
Q Consensus       227 ~~C~--~C~~~f~~~~~l~~H~~~~h  250 (343)
                      |.|+  .|...|.++.+++.|..+.|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            5553  47777777777777765554

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.68  E-value=0.41  Score=21.88  Aligned_cols=21  Identities=24%  Similarity=0.472  Sum_probs=14.3

Q ss_pred             ccccccccChHHHHHHHHhcC
Q psy4574         104 HYCNRTFDSKAKIQEHIISSH  124 (343)
Q Consensus       104 ~~C~~~f~~~~~l~~H~~~~H  124 (343)
                      +-|++.|.+++.|..|....|
T Consensus         6 ~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHHGG
T ss_pred             CCchhhhccHHHHHhHHHHHH
Confidence            347777777777777765544