Diaphorina citri psyllid: psy4599


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKKSKD
ccEEEEEEEEEcccccEEEEEEEcccccccccEEEccCEEEEEEECcccccEEEEEEEEEcCEEEEECccEEEEEEccccccCEEEEECcccEEEEEEEEccccccccEEEEcccEEEEEEEccccccCEEEEEEEECcccCECccEEEEEEEcccccccccEEEEEEHHcccccccEEEEEEcHHHHHHccccccccccc
MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSK****************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDVVVKYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDYTIYNIGNSVATNVVVSDSSFPPEAFEIQGGQFKFVIDRVPPQTNVTHVVIVQPKSYGAFNFSFAEVSYKASENAEDGDWAAFAFMTLPPLLIPFLLWFQSKTKYEKLAGGKTKKSKD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Translocon-associated protein subunit beta TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.confidentP43308
Translocon-associated protein subunit beta TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.confidentQ5E9E4
Translocon-associated protein subunit beta TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.confidentQ9CPW5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IDU, chain A
Confidence level:probable
Coverage over the Query: 2-72
View the alignment between query and template
View the model in PyMOL
Template: 3IDU, chain A
Confidence level:probable
Coverage over the Query: 82-148
View the alignment between query and template
View the model in PyMOL