Diaphorina citri psyllid: psy4650

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
KSRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFTT
cccEEEcccccEEEEEEccccEEEEEEEccccEEEEEEECcccccEEEEEEEEccccCEEEcccccccEEEEEEECccccEEEEEEECcccccEEEEcccccEEEEEccccccHHHHcccccccEEEEEEcccccEEEEEcccccEEEEEccccHHHHHcccccccEEEEEEcccccEEEEECcccEEEEEccccCEEEEEEccccEEEEEcccccEEEEcccccccEEEccccEEEEEEEEcccEEEEEEEcccccEEEEEEccccccEEEEEcccccEEEEEEECcccEEEEEcHHHHHHHHHHHccccccccHHHHccccccccEEEEEEEEEEECccCEcHHHHHHHHHHccccccccHHHHccccccEEEEccccc
KSRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINK***
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KSRLISQAKNTIIKNKRALNTELTETDIETIVRETKVDITTNKDMIEYKISYQESSRVKAFNPIQVATLILKTLYGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHGQNISAVCFHPELPIVITGSEDGSVRVWHSGTHRLEISLTYGLERVWTISSLKGSNNVAIGYDEGSVLLKVGREEPAVSMDVNGCKIIWARHSEVQQANLKTMPEVFENITAGVVLTLSVHVTIKYRLDISDSHRSVAKLRAAAETCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPCMHVLSTLQSSNVFVESLYDGLDFHHNVSRARFESLIGGLLTSFVQPIEDVLSRSNITHDQINKFTT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Coatomer subunit beta' This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner.confidentO55029
Coatomer subunit beta' This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner.confidentQ5R664
Coatomer subunit beta' This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner.confidentP35605

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044431 [CC]Golgi apparatus partconfidentGO:0005737, GO:0005794, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0030126 [CC]COPI vesicle coatprobableGO:0012506, GO:0043229, GO:0030117, GO:0005622, GO:0030135, GO:0043226, GO:0030137, GO:0005737, GO:0005575, GO:0030660, GO:0030663, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0044431, GO:0031982, GO:0048475, GO:0005794, GO:0005798, GO:0030659, GO:0012505, GO:0043227, GO:0030120, GO:0031090, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0000139, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0015629 [CC]actin cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005795 [CC]Golgi stackprobableGO:0005737, GO:0005794, GO:0043231, GO:0043229, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0044446, GO:0044431, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0010883 [BP]regulation of lipid storageprobableGO:0008150, GO:0032879, GO:0065007, GO:0050789
GO:0006891 [BP]intra-Golgi vesicle-mediated transportprobableGO:0009987, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0030903 [BP]notochord developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048568, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0005080 [MF]protein kinase C bindingprobableGO:0019899, GO:0019901, GO:0019900, GO:0003674, GO:0005488, GO:0005515
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0048205 [BP]COPI coating of Golgi vesicleprobableGO:0048200, GO:0006901, GO:0006900, GO:0006903, GO:0061024, GO:0051656, GO:0051650, GO:0044699, GO:0016044, GO:0016043, GO:0071840, GO:0048194, GO:0009987, GO:0048193, GO:0006810, GO:0048199, GO:0044765, GO:0044763, GO:0051648, GO:0051649, GO:0051234, GO:0051179, GO:0051640, GO:0051641, GO:0006996, GO:0016192, GO:0046907, GO:0016050, GO:0035964, GO:0008150
GO:0032940 [BP]secretion by cellprobableGO:0046903, GO:0006810, GO:0009987, GO:0044765, GO:0044763, GO:0051649, GO:0008150, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0005198 [MF]structural molecule activityprobableGO:0003674
GO:0006886 [BP]intracellular protein transportprobableGO:0033036, GO:0034613, GO:0046907, GO:0070727, GO:0006810, GO:0045184, GO:0008104, GO:0044763, GO:0044699, GO:0071702, GO:0015031, GO:0008150, GO:0009987, GO:0051234, GO:0051179, GO:0051649, GO:0051641
GO:0048599 [BP]oocyte developmentprobableGO:0048610, GO:0009994, GO:0030154, GO:0048468, GO:0019953, GO:0007292, GO:0044699, GO:0000003, GO:0048869, GO:0007276, GO:0048477, GO:0032502, GO:0032501, GO:0048609, GO:0032504, GO:0009987, GO:0007281, GO:0022414, GO:0044763, GO:0022412, GO:0044767, GO:0044702, GO:0003006, GO:0048856, GO:0008150
GO:0006890 [BP]retrograde vesicle-mediated transport, Golgi to ERprobableGO:0009987, GO:0016192, GO:0046907, GO:0048193, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641
GO:0006898 [BP]receptor-mediated endocytosisprobableGO:0006897, GO:0016192, GO:0006810, GO:0008150, GO:0051234, GO:0051179

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3I33, chain A
Confidence level:very confident
Coverage over the Query: 244-356
View the alignment between query and template
View the model in PyMOL
Template: 1YUW, chain A
Confidence level:very confident
Coverage over the Query: 2-173,185-202,219-356
View the alignment between query and template
View the model in PyMOL
Template: 1VYH, chain C
Confidence level:very confident
Coverage over the Query: 38-253
View the alignment between query and template
View the model in PyMOL
Template: 3I33, chain A
Confidence level:confident
Coverage over the Query: 306-380
View the alignment between query and template
View the model in PyMOL