Diaphorina citri psyllid: psy4747


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410----
MVPTLLNEKGYFTYSRGYTGVKGNSVLFEHQICLIESVTMPYWYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFDLQVDHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLAGKLSKFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQSQQQASQQDSPPQTQPEPSTKPPPQSHLPPSKLKPDLVAPPHSAIPTLGAQYPQRVAPPPSGHYPNPYPAHPVPIPNIHPVHAVVPPGSQYYGHHRPPPAAGSTQQTQTRSCSTTPLCHSYPGSPISTTCSTTP
ccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccEEEECcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*****LNEKGYFTYSRGYTGVKGNSVLFEHQICLIESVTMPYWYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFDLQVDHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLAGKLSKFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQ**************************************************************************************************************************************
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MVPTLLNEKGYFTYSRGYTGVKGNSVLFEHQICLIESVTMPYWYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFDLQVDHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLAGKLSKFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQSQQQASQQDSPPQTQPEPSTKPPPQSHLPPSKLKPDLVAPPHSAIPTLGAQYPQRVAPPPSGHYPNPYPAHPVPIPNIHPVHAVVPPGSQYYGHHRPPPAAGSTQQTQTRSCSTTPLCHSYPGSPISTTCSTTP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cyclin-K May play a role in transcriptional regulation. It is associated with an in vitro kinase activity toward both RNA polymerase II C-terminal domain and CDK2 (CAK).confidentO88874
Cyclin-K May play a role in transcriptional regulation. In vitro, is associated with a kinase activity toward both RNA polymerase II C-terminal domain and CDK2 (CAK).confidentO75909

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0004693 [MF]cyclin-dependent protein serine/threonine kinase activityprobableGO:0097472, GO:0016773, GO:0016772, GO:0003824, GO:0016301, GO:0004674, GO:0016740, GO:0003674, GO:0004672
GO:0006974 [BP]response to DNA damage stimulusprobableGO:0051716, GO:0050896, GO:0009987, GO:0006950, GO:0044763, GO:0033554, GO:0008150, GO:0044699
GO:0008353 [MF]RNA polymerase II carboxy-terminal domain kinase activityprobableGO:0003824, GO:0016773, GO:0016772, GO:0016301, GO:0004674, GO:0016740, GO:0003674, GO:0004672
GO:0002945 [CC]cyclin K-CDK13 complexprobableGO:0043234, GO:0032991, GO:0000307, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0002944 [CC]cyclin K-CDK12 complexprobableGO:0043234, GO:0032991, GO:0000307, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0071157 [BP]negative regulation of cell cycle arrestprobableGO:0051726, GO:0010564, GO:0050794, GO:0008150, GO:0010948, GO:0065007, GO:0071156, GO:0048519, GO:0050789, GO:0048523
GO:0006366 [BP]transcription from RNA polymerase II promoterprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0019438
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699
GO:0019901 [MF]protein kinase bindingprobableGO:0019900, GO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0006355 [BP]regulation of transcription, DNA-dependentprobableGO:0009889, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0019219, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0001701 [BP]in utero embryonic developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0009792, GO:0008150, GO:0043009, GO:0007275, GO:0044699
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0000079 [BP]regulation of cyclin-dependent protein serine/threonine kinase activityprobableGO:0019220, GO:0080090, GO:0019222, GO:0031323, GO:0071900, GO:0050789, GO:0043549, GO:0051246, GO:0065007, GO:0031399, GO:0065009, GO:0045859, GO:0060255, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0042325, GO:0032268, GO:0051726, GO:0051338, GO:0001932

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I53, chain A
Confidence level:very confident
Coverage over the Query: 39-283
View the alignment between query and template
View the model in PyMOL
Template: 3RGF, chain B
Confidence level:very confident
Coverage over the Query: 20-241,252-297
View the alignment between query and template
View the model in PyMOL
Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 333-349
View the alignment between query and template
View the model in PyMOL