Diaphorina citri psyllid: psy4800


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKPEFVPQQAYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQPST
ccccccccEEEEcccccccccccHHHHHHcccccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccc
MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKPEFVPQQAYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQ********
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MYEKYHGSALLIDEVQTGGGPCGKFWCHEHFDLEESPDIVTFSKKMQLGGYFLKPEFVPQQAYRVFNTWMGDPGKVLLLKGIIDTIHNENLLDRVQKTGDILLNVRLGLGQESNLQPST

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
4-aminobutyrate aminotransferase, mitochondrial Catalyzes the conversion of gamma-aminobutyrate and L-beta-aminoisobutyrate to succinate semialdehyde and methylmalonate semialdehyde, respectively. Can also convert delta-aminovalerate and beta-alanine.confidentQ9BGI0
4-aminobutyrate aminotransferase confidentQ55FI1
4-aminobutyrate aminotransferase Deaminates gamma-aminobutyric acid (GABA) to succinate-semialdehyde, which in turn is converted to succinate by the succinate semialdehyde dehydrogenase (By similarity). Required for the degradation of GABA, which is important for utilization of GABA as nitrogen source.confidentP14010

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0010039 [BP]response to iron ionprobableGO:0042221, GO:0050896, GO:0010035, GO:0008150, GO:0010038
GO:0032144 [CC]4-aminobutyrate transaminase complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0032145 [MF]succinate-semialdehyde dehydrogenase bindingprobableGO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0030170 [MF]pyridoxal phosphate bindingprobableGO:0043168, GO:0003674, GO:0048037, GO:0005488, GO:0043167
GO:0003008 [BP]system processprobableGO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009063 [BP]cellular amino acid catabolic processprobableGO:0019752, GO:0044248, GO:0006807, GO:0044281, GO:0044282, GO:0044712, GO:1901575, GO:0006520, GO:0071704, GO:0009987, GO:0044710, GO:0008150, GO:0008152, GO:0043436, GO:0009056, GO:0044238, GO:1901564, GO:1901565, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0008483 [MF]transaminase activityprobableGO:0003824, GO:0016740, GO:0003674, GO:0016769
GO:0065008 [BP]regulation of biological qualityprobableGO:0008150, GO:0065007
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0043005 [CC]neuron projectionprobableGO:0005575, GO:0097458, GO:0042995, GO:0044464, GO:0005623
GO:1901605 [BP]alpha-amino acid metabolic processprobableGO:0044238, GO:0044710, GO:0009987, GO:1901564, GO:0006082, GO:0044237, GO:0006520, GO:0019752, GO:0071704, GO:0006807, GO:0008150, GO:0044281, GO:0008152, GO:0043436
GO:0045471 [BP]response to ethanolprobableGO:1901700, GO:0050896, GO:0008150, GO:0042221, GO:0097305, GO:0010033

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OHV, chain A
Confidence level:very confident
Coverage over the Query: 1-115
View the alignment between query and template
View the model in PyMOL