Diaphorina citri psyllid: psy4805


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK
ccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccEEEEEcccccccHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccHHHHHHHHHHHcc
*MCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK
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MMCGSCSNENAYKNIFIWYQNKQRGGASGFTKEEQESSMINQAPGAPNLSILSFKGAFHGRTLGCLSTTHSKYIHKIDIPAFDWPIASFPKYKYPLEENERENKAEDEKCLAEVEDLITKYNKKGTPVAGIVVEPIQSEGGDNHGSNYFFQQLQKIGKK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
4-aminobutyrate aminotransferase Required for the degradation of gamma-aminobutyric acid (GABA), which is important for utilization of GABA as nitrogen source and for oxidative stress tolerance. Deaminates GABA to succinate semialdehyde, which in turn is converted to succinate by the succinate-semialdehyde dehydrogenase UGA2. Cannot transaminate beta-alanine (BAL).confidentP17649
4-aminobutyrate aminotransferase, mitochondrial Catalyzes the conversion of gamma-aminobutyrate and L-beta-aminoisobutyrate to succinate semialdehyde and methylmalonate semialdehyde, respectively. Can also convert delta-aminovalerate and beta-alanine.confidentQ9BGI0
Probable 4-aminobutyrate aminotransferase, mitochondrial confidentQ21217

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0032145 [MF]succinate-semialdehyde dehydrogenase bindingprobableGO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0032144 [CC]4-aminobutyrate transaminase complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0010039 [BP]response to iron ionprobableGO:0042221, GO:0050896, GO:0010035, GO:0008150, GO:0010038
GO:0003008 [BP]system processprobableGO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0065008 [BP]regulation of biological qualityprobableGO:0008150, GO:0065007
GO:0009450 [BP]gamma-aminobutyric acid catabolic processprobableGO:0019752, GO:0009063, GO:0006807, GO:0044281, GO:0044282, GO:0044712, GO:1901575, GO:0006520, GO:0071704, GO:0009448, GO:0009987, GO:0044710, GO:0032787, GO:0008150, GO:0008152, GO:0072329, GO:0043436, GO:0009056, GO:0044248, GO:0044238, GO:1901564, GO:1901565, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0043005 [CC]neuron projectionprobableGO:0005575, GO:0097458, GO:0042995, GO:0044464, GO:0005623
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0030170 [MF]pyridoxal phosphate bindingprobableGO:0043168, GO:0003674, GO:0048037, GO:0005488, GO:0043167
GO:0045471 [BP]response to ethanolprobableGO:1901700, GO:0050896, GO:0008150, GO:0042221, GO:0097305, GO:0010033

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1OHV, chain A
Confidence level:very confident
Coverage over the Query: 1-159
View the alignment between query and template
View the model in PyMOL