Diaphorina citri psyllid: psy480


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
ESHGASTSSATSWEEECHQLHPSSGSEHEDLSSDVDSESNNPVANWDRDHKIGDVFVASFSKSIVLEIYSEPWPIGTGIIRLVMCFKSIVLEIYSEFINNFSAAMDVARGESKKKPALAEFFKSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQDLLNHTGHGHPDRMSLQLALTQLESLAELLNERKREAEQTQAFKDILKSISGKLSTRPLADVHRVLLRQDDVTQLVSALVARSSGKLEGAGLNFSGDV
ccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccEEEEEEHHHccccccCEEEEEEccccc
****************CHQLHPSSGSEHEDLSSDVDSESNNPVANWDRDHKIGDVFVASFSKSIVLEIYSEPWPIGTGIIRLVMCFKSIVLEIYSEFINNFSAAMDVARGESKKKPALAEFFKSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQDLLNHTGHGHPDRMSLQLALTQLESLAELLNE******QTQAFKDILKSISGKLSTRPLADVHRVLLRQDDVTQLVSALVA*******GAGLNFSGD*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ESHGASTSSATSWEEECHQLHPSSGSEHEDLSSDVDSESNNPVANWDRDHKIGDVFVASFSKSIVLEIYSEPWPIGTGIIRLVMCFKSIVLEIYSEFINNFSAAMDVARGESKKKPALAEFFKSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQSRQNSSMDRLSFFGLMVKPVQRFPQFILFLQDLLNHTGHGHPDxxxxxxxxxxxxxxxxxxxxxxxxxxxxQAFKDILKSISGKLSTRPLADVHRVLLRQDDVTQLVSALVARSSGKLEGAGLNFSGDV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051496 [BP]positive regulation of stress fiber assemblyprobableGO:0051130, GO:0032231, GO:0032233, GO:0033043, GO:0051493, GO:0051495, GO:0032970, GO:0010638, GO:0051492, GO:0050794, GO:0044087, GO:0065007, GO:0032956, GO:0048518, GO:0008150, GO:0051128, GO:0050789, GO:0048522
GO:0048869 [BP]cellular developmental processprobableGO:0032502, GO:0008150, GO:0009987, GO:0044763, GO:0044699
GO:0006461 [BP]protein complex assemblyprobableGO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699
GO:0048856 [BP]anatomical structure developmentprobableGO:0032502, GO:0008150
GO:0032321 [BP]positive regulation of Rho GTPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0035023, GO:0046578, GO:0023051, GO:0010646, GO:0043087, GO:0050789, GO:0043085, GO:0032319, GO:0032318, GO:0043547, GO:0051345, GO:0009966, GO:0031323, GO:0030811, GO:0065007, GO:0044093, GO:0065009, GO:0051056, GO:0033121, GO:0033124, GO:0019219, GO:0048583, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0032320, GO:0031329, GO:0006140
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0005100 [MF]Rho GTPase activator activityprobableGO:0005099, GO:0030234, GO:0005096, GO:0030695, GO:0003674, GO:0008047, GO:0060589, GO:0005083
GO:0005813 [CC]centrosomeprobableGO:0005856, GO:0005575, GO:0015630, GO:0043232, GO:0044464, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0043228, GO:0044430, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0032933 [BP]SREBP signaling pathwayprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:0051173, GO:0031323, GO:0010628, GO:0023052, GO:0007165, GO:0050789, GO:0044699, GO:0080090, GO:0006984, GO:0051716, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009987, GO:0009889, GO:0050794, GO:0006950, GO:0044763, GO:0045893, GO:2001141, GO:0007154, GO:0044700, GO:0071501, GO:0006991, GO:0050896, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0045944, GO:0033554, GO:0008150, GO:0048522
GO:0033126 [BP]positive regulation of GTP catabolic processprobableGO:0009896, GO:0009894, GO:0019220, GO:0080090, GO:0031329, GO:0031325, GO:0031323, GO:0045981, GO:0009893, GO:0019222, GO:0010562, GO:0030813, GO:0030811, GO:0045979, GO:0048518, GO:0065007, GO:0033123, GO:0033121, GO:0045935, GO:0045937, GO:0033124, GO:0019219, GO:0031331, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0051173, GO:0009118, GO:1900542, GO:1900544, GO:0050789, GO:0006140, GO:0048522
GO:0005089 [MF]Rho guanyl-nucleotide exchange factor activityprobableGO:0005088, GO:0005083, GO:0005085, GO:0030695, GO:0003674, GO:0060589, GO:0030234
GO:0007010 [BP]cytoskeleton organizationprobableGO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DFK, chain A
Confidence level:very confident
Coverage over the Query: 12-62,91-129,160-277
View the alignment between query and template
View the model in PyMOL
Template: 4GOU, chain A
Confidence level:probable
Coverage over the Query: 90-218
View the alignment between query and template
View the model in PyMOL