Diaphorina citri psyllid: psy4890

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
MRTGHYLNAWLKLPERKQNFNICSIPYLVLTLLQILLWTGKKLFLFAMYCVCGYNRTVKIRARYYKLIELEEKPSGSNVYDTFTIPEVDTDEEEKPDWWSLYYSSVYSSGVVEKIQQIQRENEERKTIRLCKCCNIVPPKNELELVPEFEHFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPADRDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQSGEINSDPVRYWRSYVTDMK
ccccccEEEEECccccccccccccHHHHHHHHHHHHHHHccEEEEEEEEEEcccccHHccccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHccccccEECccccccccccccccccccccccccccccEEEcccccccccccccccccccEEEEEEEEECcccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccccEEEEEEccCEccccccccccccccccccEEEEEEccccccCEEEEEEEccccccccccCEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccc
****HYLNAWLKLPERKQNFNICSIPYLVLTLLQILLWTGKKLFLFAMYCVCGYNRTVKIRARYYKLIELEEKPSGSNVYDTFTIPEVDT***EKPDWWSLYYSSVYSSGVVEKIQQIQRENEERKTIRLCKCCNIVPPKNELELVPEFEHFADVLQTFDFYYGKL*******LAEMKVGSFKGNVMFYPADRDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTS***********VLPGITL****I*SDPVRYWRSYVTDM*
xxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MRTGHYLNAWLKLPERKQNFNICSIPYLVLTLLQILLWTGKKLFLFAMYCVCGYNRTVKIRARYYKLIELEEKPSGSNVYDTFTIPEVDTDEEEKPDWWSLYYSSVYSSGVVEKIQQIQRENEERKTIRLCKCCNIVPPKNELELVPEFEHFADVLQTFDFYYGKLFSNNKNTLAEMKVGSFKGNVMFYPADRDHLVTFSGKPLSNGALQESIDNEKVNVTIRVYIVRAYGLHPKDKDGKCDPYIVLKTGSVEINDRENYVTNQINPYFGRHFEIQGSFPTDAKLTVEIKDHDSVSKDDYIGMTEMDLESRFYSRHRGSCARWTSDLEVSGSSPGEVLPGITLQSGEINSDPVRYWRSYVTDMK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0031410 [CC]cytoplasmic vesicleprobableGO:0005737, GO:0031982, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043226
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DQV, chain A
Confidence level:very confident
Coverage over the Query: 218-345
View the alignment between query and template
View the model in PyMOL
Template: 1DJX, chain A
Confidence level:confident
Coverage over the Query: 134-344
View the alignment between query and template
View the model in PyMOL