Diaphorina citri psyllid: psy4897

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770----
FRTQLVLGGPTEAFFFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLREVTPYFRKASIISEVGWELQRGFLSDSPPSPSPQSSQRADTRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTLKSIAEANKILGPALLGDLQLIGWLARKLGQSDCLENGRASSESSGDDSTDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHNGRASSESSGDDSTDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATHSCVLNQRQVSVRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSDLSLQDKIRPGRESNPRSSAYKADALQTKLTRVGSGVLSQAAGVHIAQLSLGENSQTRTFHMRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSEEGEMRLRMSSDDGVKLLWLDFGSEEGEMREL
ccccccccccccccccccccEEEEEEEEcccccccEEEEccccccccEEEEEEccccHHccccccccccEEEEEccEEcccccHHHHHHHHHHcccEEEEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEccccccccEEEEEEccccccccccccccccEEEEEcccccccccHHHHHHHHHHcccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccCEEEccccccccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccEEEEEcHHHHcccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEcEEHEEEccccccccccccccccccccccccccccccccccccEEEEEEEccccccCEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEEEEcccEEEEEcccccccccccEEEEccccccccccccccEEEEEECccccccccccccccccccccccccHHHHHHHHEEEcccEEEEccHHHHHHHHHHHHHcccEEEEEEEEcccEEEEEEEEcccEEEEEcccccccccccEEEEccccccccccccccEEEEEEcccccccEEEccccccEEEEEEEEccccccccccc
*****VLGGPTEAFFFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGTLETYVR***************************************SISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLREVTPYFRKASIISEV**************************RYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTLKSIAEANKILGPALLGDLQLIGWLARKL**********************RWVSIFGAVTERELRLYESAPWSPEAWSTPAHN**************RWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATHSCVLNQRQVSVRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSDLSLQDKIRPGRESNPRSSAYKADALQTKLTRVGSGVLSQAAGVHIAQLSLGENSQTRTFHMRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSEEGEMRLRMSSDDGVKLLWLDFGS********
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FRTQLVLGGPTEAFFFSSRDFYSENYKYTENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKVVELEVGVGYGRCGTLETYVRGQWYKVFVSLEEDYISITLDENYDNSTVLNGTLNSNTVDSISSFMDTVDIPDSVENQKRIIRVKKSENNGLGISIKGGKENKMPILISKIFKGMAADQTEQLYVGDAILSVNGEDLREATHDEAVKALKRAGKLVELEVKYLREVTPYFRKASIISEVGWELQRGFLSDSPPSPSPQSSQRADTRYLPLQLCYLVRNYKHYDSENRTLELHSPDGVHSCILRASDASEASLWFNTLHSTLHVLTLKSIAEANKILGPALLGDLQLIGWLARKLGQSDCLENGRASSESSGDDSTDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHNGRASSESSGDDSTDRWVSIFGAVTERELRLYESAPWSPEAWSTPAHVFPLVSTRLVSSSRHSDVIVFSVRCGTPQGVATHHLRAETHRDLANWARTLVQATHSCVLNQRQVSVRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSDLSLQDKIRPGRESNPRSSAYKADALQTKLTRVGSGVLSQAAGVHIAQLSLGENSQTRTFHMRCMYRGQPSQLIVNYDFGFRLLEATAGSMGREPKILWTYPFERLRMSSDDGVKLLWLDFGSEEGEMRLRMSSDDGVKLLWLDFGSEEGEMREL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Beta-1-syntrophin Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex.confidentQ13884
Beta-1-syntrophin Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex.confidentQ99L88

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0045202 [CC]synapseprobableGO:0005575
GO:0016020 [CC]membraneprobableGO:0005575

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GSL, chain A
Confidence level:very confident
Coverage over the Query: 19-109,173-262
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Template: 2XKX, chain A
Confidence level:very confident
Coverage over the Query: 21-265
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Template: 1Z87, chain A
Confidence level:very confident
Coverage over the Query: 107-358
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Template: 3LJU, chain X
Confidence level:probable
Coverage over the Query: 320-392,457-547
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Template: 3TFM, chain A
Confidence level:probable
Coverage over the Query: 380-391,410-548
View the alignment between query and template
View the model in PyMOL
Template: 3ML4, chain A
Confidence level:probable
Coverage over the Query: 459-606
View the alignment between query and template
View the model in PyMOL