Diaphorina citri psyllid: psy4900

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-----
MLYFQVPNFRKCSPGDFECDPPHGICIPKDKRCDGYYDCRNRKDEEGCPATTGLSCDLDQFRCANGQKCIDAKLKCNYHNDCGDNSDEEKCNFTACHVGQFKCANSLCIPVSYHCDGYRDCIDGSDETNCTSIACPNNKFLCPMGAAGGKPKCIPKAQVCDGRKDCEDNADEETVCCDCSLLNCEFTCQASPTGGVCQCPEGQKVANDSRTCLLYMKNNLKQAVRSSTVSSHVKLVLLEVYVNVLKVRKLPTTAEPQSPNPCGSNNGGCEHMCIITRASGNALGYKCACDIGYRLSVNGNNCNQPTCAPGEFQCASGRCVPSTFKCDAENDCGDYSDETGCVNVTCSLSQFACENGRCVPSTWKCDSENDCGDGSDEGDFCSEKTCAYFQFHAIVLGSNLTNPTDLALDPTSGLMFVADSNQILRTNMDGTMAMSIVSEAAYKASGVALDINAKRLFWCDNLLDYIETVDYEGKNRFLILRGSQN
ccCECcccccccccccEECccccccEEcccccccccccccccccccccccccccccccccEECcccccccccccccccccccccccccccccccccccccCEcccccccccccccccccccccccccccccccccccccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccEEEccccccccccccccccccccccccccccccEEEccccccccCEEEccccccccccccccccccccccccEECccccEEccccccccccccccccccccccccccccccEEccccEECcccEEEccccccccccccccccccccccccccEEEEEccccccccEEEEccccccccccccccEEEcccccccEEEEEEcccccccEEEEEcccccEEEEEcccccEEEEEcccccEEEEEccccc
MLYFQVPNFRKCSPGDFECDPPHGICIPKDKRCDGYYDCRNRKDEEGCPATTGLSCDLDQFRCANGQKCIDAKLKCNYHNDCGDNSDEEKCNFTACHVGQFKCANSLCIPVSYHCDGYRDCIDGSDETNCTSIACPNNKFLCPMGAAGGKPKCIPKAQVCDGRKDCEDNADEETVCCDCSLLNCEFTCQASPTGGVCQCPEGQKVANDSRTCLLYMKNNLKQAVRSSTVSSHVKLVLLEVYVNVLKVRKLPTTAEPQSPNPCGSNNGGCEHMCIITRASGNALGYKCACDIGYRLSVNGNNCNQPTCAPGEFQCASGRCVPSTFKCDAENDCGDYSDETGCVNVTCSLSQFACENGRCVPSTWKCDSENDCGDGSDEGDFCSEKTCAYFQFHAIVLGSNLTNPTDLALDPTSGLMFVADSNQILRTNMDGTMAMSIVSEAAYKASGVALDINAKRLFWCDNLLDYIETVDYEGKNRFLIL*****
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MLYFQVPNFRKCSPGDFECDPPHGICIPKDKRCDGYYDCRNRKDEEGCPATTGLSCDLDQFRCANGQKCIDAKLKCNYHNDCGDNSDEEKCNFTACHVGQFKCANSLCIPVSYHCDGYRDCIDGSDETNCTSIACPNNKFLCPMGAAGGKPKCIPKAQVCDGRKDCEDNADEETVCCDCSLLNCEFTCQASPTGGVCQCPEGQKVANDSRTCLLYMKNNLKQAVRSSTVSSHVKLVLLEVYVNVLKVRKLPTTAEPQSPNPCGSNNGGCEHMCIITRASGNALGYKCACDIGYRLSVNGNNCNQPTCAPGEFQCASGRCVPSTFKCDAENDCGDYSDETGCVNVTCSLSQFACENGRCVPSTWKCDSENDCGDGSDEGDFCSEKTCAYFQFHAIVLGSNLTNPTDLALDPTSGLMFVADSNQILRTNMDGTMAMSIVSEAAYKASGVALDINAKRLFWCDNLLDYIETVDYEGKNRFLILRGSQN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030228 [MF]lipoprotein particle receptor activityprobableGO:0038024, GO:0003674, GO:0004872
GO:0071813 [MF]lipoprotein particle bindingprobableGO:0003674, GO:0071814, GO:0005488
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0005768 [CC]endosomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0050794 [BP]regulation of cellular processprobableGO:0008150, GO:0065007, GO:0050789
GO:0044699 [BP]single-organism processprobableGO:0008150
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M0C, chain C
Confidence level:very confident
Coverage over the Query: 226-482
View the alignment between query and template
View the model in PyMOL