Diaphorina citri psyllid: psy4965


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
PDQEPGDVIIVLEQKPHDRFQRQGINLVTTETITLTEALCGFTKVIKHLDDRQLLITHPPGEVIKPEDIKGIVGEGMPIYKNPYEKGTLYIKFDVQFPESYFNNDAKLKELEALLSPRPSVDMPPPHSEHVEEVELREYIASERGAGGGGMGGEAYHSDEDDEMGGHMHEGQSVRCANQ
cccccccEEEEEECccccccEECcccEEEEEEEcHHHcccccEEEEEcccccEEEEEcccccEEccccEEEEccccccccccccccccEEEEEEEEccccccccHHHHHHHHHHccccccccccccccccCEEEEEEEccccccccccccccccccccccccccccccccccccccccc
PDQEPGDVIIVLEQKPHDRFQRQGINLVTTETITLTEALCGFTKVIKHLDDRQLLITHPPGEVIKPEDIKGIVGEGMPIYKNPYEKGTLYIKFDVQFPESYFNNDAKLKE********************VEEVELRE*****************************************
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PDQEPGDVIIVLEQKPHDRFQRQGINLVTTETITLTEALCGFTKVIKHLDDRQLLITHPPGEVIKPEDIKGIVGEGMPIYKNPYEKGTLYIKFDVQFPESYFNNDAKLKELEALLSPRPSVDMPPPHSEHVEEVELREYIASERGAGGGGMGGEAYHSDEDDEMGGHMHEGQSVRCANQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DnaJ homolog subfamily A member 2 Co-chaperone of Hsc70.confidentO60884
DnaJ homolog subfamily A member 2 Co-chaperone of Hsc70.confidentQ2HJ94
DnaJ homolog subfamily A member 2 Co-chaperone of Hsc70.confidentQ9QYJ0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050750 [MF]low-density lipoprotein particle receptor bindingprobableGO:0070325, GO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0070013 [CC]intracellular organelle lumenprobableGO:0005575, GO:0043233, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0043229, GO:0005623, GO:0044424, GO:0043226, GO:0044422
GO:0042769 [BP]DNA damage response, detection of DNA damageprobableGO:0051716, GO:0051606, GO:0050896, GO:0009987, GO:0006974, GO:0006950, GO:0008150, GO:0033554, GO:0044763, GO:0044699
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0001671 [MF]ATPase activator activityprobableGO:0003674, GO:0030234, GO:0060589, GO:0008047, GO:0060590
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0032991 [CC]macromolecular complexprobableGO:0005575

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NLT, chain A
Confidence level:very confident
Coverage over the Query: 1-99
View the alignment between query and template
View the model in PyMOL
Template: 1XAO, chain A
Confidence level:very confident
Coverage over the Query: 19-141
View the alignment between query and template
View the model in PyMOL