Diaphorina citri psyllid: psy5087


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKVYQHLGLDFDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLVKSQLIERAKDFNIILDDVSITDLSFGKDYTAAVEAKQVAQQEAQRAVFVVERAKQEKQQKILQAEGEAEAAKKLGLAVGQNPGYLKLRKIRAAQNIAHTRLHYVQAGGQNQTQDYFLLDVTNGILWIRGLQVNIIIVPEHIYLSSGDPVPVDEGGNITLLPSLLPLLSPYYANRVTEYRIIRQARHGAVYFSSNKVAIMRCTPQQLQAGLIQDKESRVMFTPDF
cccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccEEECccccEEEEEEcccccccCECccccEEEccccccCEEEEEEEEEEECccccccccccEEEEEEEEEEECcccccHHHHHHcccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccCEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccEEEECccccccccCEEECccccccEEcccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEEEcccccEEEEcccccccccccHHHHccccCEEECccccccccc
************FGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKVYQHLGLDFDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLVKSQLIERAKDFNIILDDVSITDLSFGKDYTAAVEAKQVAQQEAQRAVFVV******************EAAKKLGLAVGQNPGYLKLRKIRAAQNIAHTRLHYVQAGGQNQTQDYFLLDVTNGILWIRGLQVNIIIVPEHIYLSSGDPVPVDEGGNITLLPSLLPLLSPYYANRVTEYRIIRQARHGAVYFSSNKVAIMRCTPQQLQAGLIQDKESR*******
xxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MAQSKLNDFAGRFGKGPKGVGVGLKLAALAGAAAYGVSQSMFTVEGGHRAIMFSRIGGVQNNVFAEGLHFRLPWFQYPIIYDIRSRPRKISSPTGSKDLQMVNISLRVLARPDASKLPKVYQHLGLDFDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLVKSQLIERAKDFNIILDDVSITDLSFGKDYTAAVEAKQVAQQEAQRAVFVVERAxxxxxxxxxxxxxxxxxxxxxGLAVGQNPGYLKLRKIRAAQNIAHTRLHYVQAGGQNQTQDYFLLDVTNGILWIRGLQVNIIIVPEHIYLSSGDPVPVDEGGNITLLPSLLPLLSPYYANRVTEYRIIRQARHGAVYFSSNKVAIMRCTPQQLQAGLIQDKESRVMFTPDF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Prohibitin-2 Acts as a mediator of transcriptional repression by nuclear hormone receptors via recruitment of histone deacetylases. Functions as an estrogen receptor (ER)-selective coregulator that potentiates the inhibitory activities of antiestrogens and represses the activity of estrogens. Competes with NCOA1 for modulation of ER transcriptional activity. Probably involved in regulating mitochondrial respiration activity and in aging.very confidentA9UMS3
Prohibitin-2 Acts as a mediator of transcriptional repression by nuclear hormone receptors via recruitment of histone deacetylases (By similarity). Functions as an estrogen receptor (ER)-selective coregulator that potentiates the inhibitory activities of antiestrogens and represses the activity of estrogens. Competes with NCOA1 for modulation of ER transcriptional activity. Probably involved in regulating mitochondrial respiration activity and in aging.very confidentQ99623
Prohibitin-2 Acts as a mediator of transcriptional repression by nuclear hormone receptors via recruitment of histone deacetylases. Functions as an estrogen receptor (ER)-selective coregulator that potentiates the inhibitory activities of antiestrogens and represses the activity of estrogens. Competes with NCOA1 for modulation of ER transcriptional activity. Probably involved in regulating mitochondrial respiration activity and in aging.very confidentQ5ZMN3

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005739 [CC]mitochondrionconfidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0045892 [BP]negative regulation of transcription, DNA-dependentprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0008150, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0010558, GO:0048523
GO:0060762 [BP]regulation of branching involved in mammary gland duct morphogenesisprobableGO:0060688, GO:0022603, GO:0050793, GO:0008150, GO:2000026, GO:2000027, GO:0051239, GO:0065007, GO:0050789
GO:0033147 [BP]negative regulation of intracellular estrogen receptor signaling pathwayprobableGO:0033144, GO:0033146, GO:0009968, GO:0033143, GO:0009966, GO:0048585, GO:0048583, GO:0050794, GO:0008150, GO:0023057, GO:0065007, GO:0010648, GO:0023051, GO:0048519, GO:0010646, GO:0050789, GO:0048523
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0005774 [CC]vacuolar membraneprobableGO:0005737, GO:0005575, GO:0031090, GO:0005773, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0006351 [BP]transcription, DNA-dependentprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0019438
GO:0060744 [BP]mammary gland branching involved in thelarcheprobableGO:0048754, GO:0001763, GO:0009653, GO:0007275, GO:0044699, GO:0002009, GO:0000003, GO:0045136, GO:0060443, GO:0060444, GO:0048729, GO:0060562, GO:0030879, GO:0032502, GO:0046543, GO:0032501, GO:0035239, GO:0061138, GO:0060429, GO:0009888, GO:0044767, GO:0003006, GO:0008150, GO:0060603, GO:0022612, GO:0035295, GO:0046660, GO:0048513, GO:0007548, GO:0044707, GO:0022414, GO:0048856, GO:0048731, GO:0048732, GO:0042695, GO:0061180
GO:0060749 [BP]mammary gland alveolus developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0048732, GO:0007275, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0061377, GO:0030879, GO:0044699
GO:0005747 [CC]mitochondrial respiratory chain complex IprobableGO:0044464, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0044455, GO:0031967, GO:0031966, GO:0043234, GO:0045271, GO:0032991, GO:0043231, GO:0030964, GO:0019866, GO:0005623, GO:0005622, GO:0044446, GO:0005743, GO:0044444, GO:0005746, GO:0044429, GO:0044424, GO:0044425, GO:0070469, GO:0044422
GO:0033600 [BP]negative regulation of mammary gland epithelial cell proliferationprobableGO:0042127, GO:0008285, GO:0050678, GO:0050793, GO:0050680, GO:0033599, GO:0008150, GO:0065007, GO:2000026, GO:0051239, GO:0048519, GO:0050794, GO:0050789, GO:0048523
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BK6, chain A
Confidence level:very confident
Coverage over the Query: 74-202,217-256
View the alignment between query and template
View the model in PyMOL
Template: 2ZUO, chain A
Confidence level:probable
Coverage over the Query: 41-192
View the alignment between query and template
View the model in PyMOL