Diaphorina citri psyllid: psy5108


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MAPPLYGDLGKHARDLFSKGYNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVSSRQIFNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGLTFSEKWNTDNVLTTEVSSNIIDGARLAANTSFAPQTGDKTVKLSGEYKNSLAAVNLESEFKSLNPVISAAGVLGYNGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVDDGKLFGGTVYQKLGPKLETGVQLAWSSESNDTKFAFGCKYDLENQASVRAKVNNASQIGLGYSQKLNDALSLN
cccccccccccccccccccccccccEEEEEEEcccccEEEEEECccccccccEEEEEEEEEEEcccccccccccCECccHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEECcccccEEEEEEEEEEEEcccccEEEEEEECccccCEEEEEEECcccccEEEEEEEccccccccEEEEEEEEcccEEEEEEEEECccccEEEEEEEEEccCEEEEEEEEEEccccccEEEEEEEEECcccEEEEEEEccccEEEEEEEEEccccEEEEEEEEEEcccccCEEEEEEEEECccccEEEEEEcccCEEEEEEEEEEcccEEcc
*APPLYGDLGKHARDLFSKGYNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVSSRQIFNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGLTFSEKWNTDNVLTTEVSSNIIDGARLAANTSFAPQTGDKTVKLSGEYKNSLAAVNLESEFKSLNPVISAAGVLGYNGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVDDGKLFGGTVYQKLGPKLETGVQLAWSSESNDTKFAFGCKYDLENQASVRAKVNNASQIGLGYSQKLNDALSL*
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MAPPLYGDLGKHARDLFSKGYNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVSSRQIFNIDVIKIDLKTKTDSGVEFNSGGTAQLESGKIFGTLESKYKAKNYAGLTFSEKWNTDNVLTTEVSSNIIDGARLAANTSFAPQTGDKTVKLSGEYKNSLAAVNLESEFKSLNPVISAAGVLGYNGWLCGYSLKFDSKDAKLKANRLSLGFVGSDFVFHTNVDDGKLFGGTVYQKLGPKLETGVQLAWSSESNDTKFAFGCKYDLENQASVRAKVNNASQIGLGYSQKLNDALSLN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Voltage-dependent anion-selective channel Forms a channel through the cell membrane that allows diffusion of small hydrophilic molecules.confidentQ94920
Voltage-dependent anion-selective channel protein 2 Forms a channel through the cell membrane that allows diffusion from small hydrophilic molecules.confidentP82013
Voltage-dependent anion-selective channel protein 2 Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective.confidentQ60930

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005261 [MF]cation channel activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0005216, GO:0008324, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022803, GO:0022838
GO:0034765 [BP]regulation of ion transmembrane transportprobableGO:0051049, GO:0050794, GO:0065007, GO:0034762, GO:0008150, GO:0032879, GO:0050789, GO:0043269
GO:0005791 [CC]rough endoplasmic reticulumprobableGO:0005737, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0016006 [CC]NebenkernprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005739, GO:0005622, GO:0005575, GO:0044444, GO:0005623, GO:0044424, GO:0043227, GO:0043226
GO:0005253 [MF]anion channel activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0005216, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022803, GO:0022838, GO:0008509
GO:0009888 [BP]tissue developmentprobableGO:0032502, GO:0048856, GO:0008150
GO:0044767 [BP]single-organism developmental processprobableGO:0032502, GO:0008150, GO:0044699
GO:0015288 [MF]porin activityprobableGO:0005215, GO:0022857, GO:0015267, GO:0003674, GO:0022829, GO:0022803
GO:0042645 [CC]mitochondrial nucleoidprobableGO:0031974, GO:0043229, GO:0043228, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0005739, GO:0009295, GO:0005759, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0001662 [BP]behavioral fear responseprobableGO:0032501, GO:0044707, GO:0044708, GO:0050896, GO:0007610, GO:0006952, GO:0006950, GO:0002209, GO:0042596, GO:0033555, GO:0008150, GO:0044699
GO:0009653 [BP]anatomical structure morphogenesisprobableGO:0032502, GO:0048856, GO:0008150
GO:0032403 [MF]protein complex bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0005743 [CC]mitochondrial inner membraneprobableGO:0019866, GO:0031975, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0005740, GO:0005739, GO:0031967, GO:0031966, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044429, GO:0044424, GO:0044422
GO:0007612 [BP]learningprobableGO:0032501, GO:0044707, GO:0044708, GO:0050896, GO:0050890, GO:0007610, GO:0007611, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0007270 [BP]neuron-neuron synaptic transmissionprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007268, GO:0007267, GO:0007154, GO:0044699, GO:0003008
GO:0007275 [BP]multicellular organismal developmentprobableGO:0032502, GO:0032501, GO:0008150, GO:0044699, GO:0044707
GO:0044070 [BP]regulation of anion transportprobableGO:0051049, GO:0008150, GO:0065007, GO:0032879, GO:0050789, GO:0043269
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0006851 [BP]mitochondrial calcium ion transportprobableGO:0009987, GO:0072511, GO:0046907, GO:0006812, GO:0006811, GO:0006810, GO:0044763, GO:0006816, GO:0008150, GO:0044765, GO:0030001, GO:0051649, GO:0006839, GO:0070838, GO:0051234, GO:0051179, GO:0044699, GO:0051641

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3EMN, chain X
Confidence level:very confident
Coverage over the Query: 1-61,151-345
View the alignment between query and template
View the model in PyMOL
Template: 3EMN, chain X
Confidence level:very confident
Coverage over the Query: 98-173,189-218,241-344
View the alignment between query and template
View the model in PyMOL