Diaphorina citri psyllid: psy5120

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MPLQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
cccccccccccccEEEEEEccHHHHHccHHHHHHHHHHHHHccccccccccccCEEcccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHHHHcccc
****SAFLMTTGFKSYLNQYSTNQ*****************MSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVH*
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MPLQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nucleosome-remodeling factor subunit NURF301 Histone-binding component of NURF (nucleosome remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. Specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. Required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.confidentQ9W0T1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008134 [MF]transcription factor bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0008094 [MF]DNA-dependent ATPase activityprobableGO:0016787, GO:0016818, GO:0042623, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0016887
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0000122 [BP]negative regulation of transcription from RNA polymerase II promoterprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0010629, GO:0050789, GO:0010605, GO:0019222, GO:2000112, GO:2000113, GO:0060255, GO:0006357, GO:0065007, GO:0048519, GO:0010468, GO:0045934, GO:0019219, GO:0009889, GO:0050794, GO:0045892, GO:0051171, GO:0051172, GO:2001141, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0008150, GO:0010558, GO:0048523
GO:0006338 [BP]chromatin remodelingprobableGO:0006996, GO:0051276, GO:0006325, GO:0071840, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0016568
GO:0016589 [CC]NURF complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0031010, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0070603, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!