Psyllid ID: psy5120

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MPLQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Secondary Structure (PSIPRED)
cccccccccccccEEEEEEccHHHHHccHHHHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccHHcccccEEEEEEcccccHHccccHHHHHHHHHHHHHccEEEccccccEEEccccccHHHHHHHHHHHHHHHHHcccccHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MPLQSAFLMTTGFKSYLNQYSTNQIALNKTqrneerdkkrhmshkfsltptgefkwagpvhgprnVLVNTLRATLLQLESsiipafmhvnwpslrkpwisaVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Flexible Loop (DISEMBL)
MPLQSAFLMTTGFKSYLNQYSTNQIALNktqrneerdkkrhmshkfsltptgefkwagpvHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Low Complexity Region (SEG)
MPLQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Disordered region (IsUnstruct)
******FLMTTGFKSYLNQYSTN**************************PTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQL***
Disordered Region (DISOPRED)
****SA*LMTTGFKSYLNQYSTNQ*****************MSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVH*
Disordered Region (DISEMBL)
MPLQSAFLMTTGFKSYLNQYSTNQIALN****************KFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Disordered Region (DISPRO)
**L*SAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPLQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	138	2.2.26 [Sep-21-2011]
Q9W0T1	2669	Nucleosome-remodeling fac	yes	N/A	0.934	0.048	0.534	6e-36
Q12830	3046	Nucleosome-remodeling fac	no	N/A	0.905	0.041	0.512	2e-33
Q6BER5	2194	Nucleosome-remodeling fac	no	N/A	0.847	0.053	0.235	0.0006

>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster GN=E(bx) PE=1 SV=2

 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 69/129 (53%), Positives = 93/129 (72%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M  GFK+Y+NQYSTN IALNK QRNEERDK+RH+SHKFSLT   +FKW G   G  + ++
Sbjct: 557 MEQGFKNYVNQYSTNPIALNKPQRNEERDKRRHLSHKFSLTTASDFKWIGITMGTTDNMI 616

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
            TLR TL+  ES+I  +F+++NW   +K W +AV  + +  +FA  +++ QA +K VVFA
Sbjct: 617 TTLRQTLINFESNIAASFLNINWVVNKKIWNAAVMNARRPSEFAVVLLLFQASLKSVVFA 676

Query: 129 SVWHEQLVH 137
           +VWHEQL H
Sbjct: 677 NVWHEQLGH 685

Histone-binding component of NURF (nucleosome remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. Specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. Required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.
Drosophila melanogaster (taxid: 7227)

>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query: 13  FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
           ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct: 848 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 907

Query: 73  ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
            T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct: 908 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 967

Query: 133 EQLVH 137
           E L H
Sbjct: 968 ESLGH 972

Histone-binding component of NURF (nucleosome-remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. Specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. May also regulate transcription through direct binding to DNA or transcription factors.

Homo sapiens (taxid: 9606)

>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis elegans GN=nurf-1 PE=1 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 6/123 (4%)

Query: 13  FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWA----GPVHGPRNVLV 68
           F +Y N YS N+++ +   R +  DKK++M+ KF+      F W        +G  ++  
Sbjct: 623 FMTYYNYYSRNEMSESFLTRKKAADKKKYMASKFAQ--IDNFDWVVAKNRQFYGDASLHC 680

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
             +  TL Q+  +I    MH  WP   K +   V+ +   +     ++ L   ++  +F 
Sbjct: 681 KFIMWTLQQVIKNIPIDLMHRKWPEFAKGFDLEVSVADDYKKLVTCLLKLDCAVRKTIFM 740

Query: 129 SVW 131
             W
Sbjct: 741 PQW 743

Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
332027303	2702	Nucleosome-remodeling factor subunit [Ac	0.934	0.047	0.713	2e-49
328788592	2735	PREDICTED: nucleosome-remodeling factor	0.934	0.047	0.720	2e-49
380014032	2734	PREDICTED: LOW QUALITY PROTEIN: nucleoso	0.934	0.047	0.720	2e-49
383857078	2734	PREDICTED: LOW QUALITY PROTEIN: nucleoso	0.934	0.047	0.720	4e-49
350417610	2733	PREDICTED: nucleosome-remodeling factor	0.934	0.047	0.713	6e-49
340712317	2081	PREDICTED: nucleosome-remodeling factor	0.934	0.061	0.705	8e-49
322790016	2261	hypothetical protein SINV_12870 [Solenop	0.934	0.057	0.705	1e-48
340712315	2733	PREDICTED: nucleosome-remodeling factor	0.934	0.047	0.705	1e-48
307206270	3705	Nucleosome-remodeling factor subunit NUR	0.934	0.034	0.713	2e-48
307180228	3651	Nucleosome-remodeling factor subunit NUR	0.934	0.035	0.689	1e-46

>gi|332027303|gb|EGI67387.1| Nucleosome-remodeling factor subunit [Acromyrmex echinatior]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 105/129 (81%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN IALNKTQRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 716 MDNNFKSYVNQYSTNPIALNKTQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 775

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLES+I  +FMH+NWP LRKPW +AV + V  RDFAR +IVLQACIK VVFA
Sbjct: 776 STLRQTILQLESNIQASFMHINWPLLRKPWTTAVGSCVNPRDFARTLIVLQACIKSVVFA 835

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 836 SVWHDQLGH 844

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788592|ref|XP_395718.4| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform 1 [Apis mellifera]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN IALNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 703 MDNNFKSYVNQYSTNPIALNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 762

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 763 STLRQTILQLESSIQSSFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 822

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 823 SVWHDQLGH 831

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014032|ref|XP_003691048.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit NURF301-like [Apis florea]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN IALNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 703 MDNNFKSYVNQYSTNPIALNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 762

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 763 STLRQTILQLESSIQSSFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 822

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 823 SVWHDQLGH 831

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857078|ref|XP_003704033.1| PREDICTED: LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit NURF301-like [Megachile rotundata]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/129 (72%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN IALNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 702 MDNTFKSYVNQYSTNPIALNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 761

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 762 STLRQTILQLESSIQASFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 821

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 822 SVWHDQLGH 830

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417610|ref|XP_003491506.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like [Bombus impatiens]

 Score =  198 bits (504), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN I+LNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 705 MDNNFKSYVNQYSTNPISLNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 764

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 765 STLRQTILQLESSIQSSFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 824

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 825 SVWHDQLGH 833

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712317|ref|XP_003394708.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform 2 [Bombus terrestris]

 Score =  197 bits (502), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN I+LNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 52  MDNNFKSYVNQYSTNPISLNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 111

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +T+R T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 112 STIRQTILQLESSIQSSFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 171

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 172 SVWHDQLGH 180

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790016|gb|EFZ15092.1| hypothetical protein SINV_12870 [Solenopsis invicta]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN +ALNKTQRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 226 MDNNFKSYVNQYSTNLVALNKTQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 285

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLES+I  +FMH NWP LRKPW +AV   V  RDFAR +IVLQACIK VVFA
Sbjct: 286 STLRQTILQLESNIQASFMHTNWPLLRKPWTAAVGACVNPRDFARTLIVLQACIKSVVFA 345

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 346 SVWHDQLGH 354

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712315|ref|XP_003394707.1| PREDICTED: nucleosome-remodeling factor subunit NURF301-like isoform 1 [Bombus terrestris]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/129 (70%), Positives = 103/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN I+LNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 704 MDNNFKSYVNQYSTNPISLNKAQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 763

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +T+R T+LQLESSI  +FMH NWP LRKPW +AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 764 STIRQTILQLESSIQSSFMHTNWPLLRKPWTTAVGACVNPRDFARALIVLQACIKSVVFA 823

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 824 SVWHDQLGH 832

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206270|gb|EFN84335.1| Nucleosome-remodeling factor subunit NURF301 [Harpegnathos saltator]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 102/129 (79%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYSTN +ALNKTQRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 723 MDNNFKSYVNQYSTNPVALNKTQRNEERDKKRHLSHKFSLTQASEFKWVGSLTGTRALLV 782

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLES+I   FMH NWP LRKPW  AV   V  RDFARA+IVLQACIK VVFA
Sbjct: 783 STLRQTILQLESNIQAPFMHTNWPLLRKPWTVAVGACVNPRDFARALIVLQACIKSVVFA 842

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 843 SVWHDQLGH 851

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180228|gb|EFN68261.1| Nucleosome-remodeling factor subunit NURF301 [Camponotus floridanus]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 89/129 (68%), Positives = 100/129 (77%)

Query: 9   MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
           M   FKSY+NQYS N  ALNK QRNEERDKKRH+SHKFSLT   EFKW G + G R +LV
Sbjct: 715 MDNNFKSYVNQYSNNPTALNKMQRNEERDKKRHLSHKFSLTQVSEFKWVGSLTGTRALLV 774

Query: 69  NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
           +TLR T+LQLES+I   FMH NWP LRKPW +AV+  V  RDFAR +IVLQACIK VVFA
Sbjct: 775 STLRQTILQLESNIQAPFMHTNWPLLRKPWTAAVSACVNPRDFARTLIVLQACIKSVVFA 834

Query: 129 SVWHEQLVH 137
           SVWH+QL H
Sbjct: 835 SVWHDQLGH 843

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	138
FB|FBgn0000541	2669	E(bx) "Enhancer of bithorax" [	0.934	0.048	0.534	1.4e-32
UNIPROTKB|F1LWS6	822	F1LWS6 "Uncharacterized protei	0.905	0.152	0.52	4.1e-32
UNIPROTKB|F1LX76	2894	F1LX76 "Uncharacterized protei	0.905	0.043	0.52	3e-31
UNIPROTKB|F1M1V5	2952	F1M1V5 "Uncharacterized protei	0.905	0.042	0.52	3e-31
UNIPROTKB|F1M1V4	3013	F1M1V4 "Uncharacterized protei	0.905	0.041	0.52	3.1e-31
UNIPROTKB|F5GXF5	2457	BPTF "Nucleosome-remodeling fa	0.905	0.050	0.512	5e-31
UNIPROTKB|F1PFZ4	2716	BPTF "Uncharacterized protein"	0.905	0.046	0.512	5.7e-31
UNIPROTKB|E7ETD6	2764	BPTF "Nucleosome-remodeling fa	0.905	0.045	0.512	5.8e-31
UNIPROTKB|J9JHE8	2842	BPTF "Uncharacterized protein"	0.905	0.043	0.512	6e-31
UNIPROTKB|F1N3U7	2853	BPTF "Uncharacterized protein"	0.905	0.043	0.512	6.1e-31

FB|FBgn0000541 E(bx) "Enhancer of bithorax" [Drosophila melanogaster (taxid:7227)]

 Score = 373 (136.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 69/129 (53%), Positives = 93/129 (72%)

Query:     9 MTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLV 68
             M  GFK+Y+NQYSTN IALNK QRNEERDK+RH+SHKFSLT   +FKW G   G  + ++
Sbjct:   557 MEQGFKNYVNQYSTNPIALNKPQRNEERDKRRHLSHKFSLTTASDFKWIGITMGTTDNMI 616

Query:    69 NTLRATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFA 128
              TLR TL+  ES+I  +F+++NW   +K W +AV  + +  +FA  +++ QA +K VVFA
Sbjct:   617 TTLRQTLINFESNIAASFLNINWVVNKKIWNAAVMNARRPSEFAVVLLLFQASLKSVVFA 676

Query:   129 SVWHEQLVH 137
             +VWHEQL H
Sbjct:   677 NVWHEQLGH 685

GO:0042766 "nucleosome mobilization" evidence=IDA;TAS

GO:0006351 "transcription, DNA-dependent" evidence=IMP;IDA

GO:0016589 "NURF complex" evidence=NAS;IDA;TAS

GO:0006334 "nucleosome assembly" evidence=NAS

GO:0030097 "hemopoiesis" evidence=IMP

GO:0006338 "chromatin remodeling" evidence=IMP

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035076 "ecdysone receptor-mediated signaling pathway" evidence=IGI

GO:0035073 "pupariation" evidence=IMP

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IPI

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0006325 "chromatin organization" evidence=IMP

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IGI;IMP

GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|F1LWS6 F1LWS6 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 361 (132.1 bits), Expect = 4.1e-32, P = 4.1e-32
 Identities = 65/125 (52%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   675 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 734

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLES+I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   735 LTITQLESNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 794

Query:   133 EQLVH 137
             E L H
Sbjct:   795 ESLGH 799

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1LX76 F1LX76 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 361 (132.1 bits), Expect = 3.0e-31, P = 3.0e-31
 Identities = 65/125 (52%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   701 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 760

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLES+I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   761 LTITQLESNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 820

Query:   133 EQLVH 137
             E L H
Sbjct:   821 ESLGH 825

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1M1V5 F1M1V5 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 361 (132.1 bits), Expect = 3.0e-31, P = 3.0e-31
 Identities = 65/125 (52%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   767 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 826

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLES+I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   827 LTITQLESNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 886

Query:   133 EQLVH 137
             E L H
Sbjct:   887 ESLGH 891

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1M1V4 F1M1V4 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 361 (132.1 bits), Expect = 3.1e-31, P = 3.1e-31
 Identities = 65/125 (52%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   828 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 887

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLES+I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   888 LTITQLESNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 947

Query:   133 EQLVH 137
             E L H
Sbjct:   948 ESLGH 952

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F5GXF5 BPTF "Nucleosome-remodeling factor subunit BPTF" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 5.0e-31, P = 5.0e-31
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   785 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 844

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   845 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 904

Query:   133 EQLVH 137
             E L H
Sbjct:   905 ESLGH 909

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1PFZ4 BPTF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 358 (131.1 bits), Expect = 5.7e-31, P = 5.7e-31
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   523 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 582

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   583 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 642

Query:   133 EQLVH 137
             E L H
Sbjct:   643 ESLGH 647

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7ETD6 BPTF "Nucleosome-remodeling factor subunit BPTF" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 5.8e-31, P = 5.8e-31
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   709 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 768

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   769 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 828

Query:   133 EQLVH 137
             E L H
Sbjct:   829 ESLGH 833

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9JHE8 BPTF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 358 (131.1 bits), Expect = 6.0e-31, P = 6.0e-31
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   649 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 708

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   709 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 768

Query:   133 EQLVH 137
             E L H
Sbjct:   769 ESLGH 773

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1N3U7 BPTF "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 358 (131.1 bits), Expect = 6.1e-31, P = 6.1e-31
 Identities = 64/125 (51%), Positives = 85/125 (68%)

Query:    13 FKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLR 72
             ++ Y NQYSTN  ALNK Q  E+ DK+RH++HKF LTP GEFKW G VHG + + ++TLR
Sbjct:   652 YRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLR 711

Query:    73 ATLLQLESSIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWH 132
              T+ QLE++I  +F+H NW S R  WI AV    K R+FA A+ +L+  +KPVV   +W 
Sbjct:   712 LTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWR 771

Query:   133 EQLVH 137
             E L H
Sbjct:   772 ESLGH 776

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0016589 "NURF complex" evidence=IEA

GO:0009952 "anterior/posterior pattern specification" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0007492 "endoderm development" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IEA

GO:0001892 "embryonic placenta development" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W0T1	NU301_DROME	No assigned EC number	0.5348	0.9347	0.0483	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	138
KOG1473|consensus	1414		99.94
KOG1473|consensus	1414		98.09

>KOG1473|consensus

Probab=99.94  E-value=1.9e-28  Score=232.60  Aligned_cols=134  Identities=22%  Similarity=0.226  Sum_probs=131.6

Q ss_pred             ccccccccCCceeeeeccchhhhhhChhhhhHHHhHhhhhcccccCCCCCceeecc--cccCchHHHHHHHHHHHHHHHH
Q psy5120           3 LQSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAG--PVHGPRNVLVNTLRATLLQLES   80 (138)
Q Consensus         3 ~~frlG~e~~fk~Y~NqYs~N~~Alnk~qr~eerDkkr~ls~KFslt~~~eFkW~g--~~~Gs~~~~~~tlr~Ti~~le~   80 (138)
                      +.|.+|+|++|+.|  ||++|++++++.+++|++|+|+||++||++++.+.+.|.|  .++|+..++.+++++|+.+.++
T Consensus       572 ~~~e~~~dqtf~~y--~ys~n~vse~~~~d~e~~dkk~~~~tkf~l~~nsd~~~~g~~~t~gt~~~~~~~~~~t~~~~lS  649 (1414)
T KOG1473|consen  572 RLREEGNDQTFMKY--YYSGNEVSEIFLTDSENADKKSHMQTKFALITNSDGVTAGNVTTYGTGSQHKKLIARTLQQGLS  649 (1414)
T ss_pred             hhhhcccccchhhh--cccCCchhhccCCchhhhcccccccceecccccccceeccccccccchhhcchHHHhhhhhhhc
Confidence            46889999999999  9999999999999999999999999999999999999999  8999999999999999999999


Q ss_pred             hcCcccCCCCchhhhhhHHHHhhcccCHHHHHHHHHHHhhhhcchhhhhhhhhhcCCC
Q psy5120          81 SIIPAFMHVNWPSLRKPWISAVNTSVKARDFARAMIVLQACIKPVVFASVWHEQLVHA  138 (138)
Q Consensus        81 ~Ip~~fmH~nW~~~rk~W~~~V~~~~~~~~fA~aL~~le~~ir~vvf~~vW~e~LGht  138 (138)
                      +||.++||++|+.+.|.|..||+.+.++.+|+-+++.++|++||++|+++|||+||||
T Consensus       650 niP~s~~n~~w~~~tkg~~lavs~A~~~~el~s~t~~~d~s~~~~~~~~~ssn~L~qt  707 (1414)
T KOG1473|consen  650 NIPISYNNRKWPVYTKGFELAVSAAADLAELSSETLEPDLSKRSNAFKAASSNILGQT  707 (1414)
T ss_pred             cCchHhhhccchhhccchhhhhhccchHHHHHHhhcccchhhhhhhhccchhhhhcch
Confidence            9999999999999999999999999999999999999999999999999999999997

>KOG1473|consensus

Probab=98.09  E-value=1.8e-06  Score=84.42  Aligned_cols=112  Identities=13%  Similarity=0.048  Sum_probs=97.8

Q ss_pred             cccccccCCceeeeeccchhhhhhChhhhhHHHhHhhh-----hcccccCCCCCceeecc--cccCchHHHHHHHH-HHH
Q psy5120           4 QSAFLMTTGFKSYLNQYSTNQIALNKTQRNEERDKKRH-----MSHKFSLTPTGEFKWAG--PVHGPRNVLVNTLR-ATL   75 (138)
Q Consensus         4 ~frlG~e~~fk~Y~NqYs~N~~Alnk~qr~eerDkkr~-----ls~KFslt~~~eFkW~g--~~~Gs~~~~~~tlr-~Ti   75 (138)
                      ||..++|+-++.|+++|.+|+.+++++|+++++++|++     +++|+++++.+.++|.+  .+.+.+++...+++ ++.
T Consensus       835 y~~~~~~n~~rie~s~~~~ng~~v~akQ~r~pgr~~~s~~~ek~A~~s~ld~f~~~Rggks~vvl~kavL~~~~mk~~v~  914 (1414)
T KOG1473|consen  835 YWPKQMDNWLRIEHSIFQSNGVTVGAKQARDPGRTKQSLQAEKTAPKSDLDSFTWWRGGKSKVVLQKAVLSQSIMKKLVW  914 (1414)
T ss_pred             cchhhccCceeeeechhccCceeechhhhcCCcchhhhcchhhccccccccchhhhhcCcceeeehhhhcchHHHHHHhh
Confidence            68889999999999999999999999999999999999     88999999999999988  67899999999999 788


Q ss_pred             HHHHHhcCcccCCC----CchhhhhhHHHHhhcccCHHHHHHHH
Q psy5120          76 LQLESSIIPAFMHV----NWPSLRKPWISAVNTSVKARDFARAM  115 (138)
Q Consensus        76 ~~le~~Ip~~fmH~----nW~~~rk~W~~~V~~~~~~~~fA~aL  115 (138)
                      .+.+..+|..=+=+    -=++.|.-|-.+|..+.+...||.-|
T Consensus       915 ~~g~ta~~k~nfl~~~y~p~~s~~s~wk~av~n~enlh~LAlQ~  958 (1414)
T KOG1473|consen  915 QQGFTAGPKSNFLDWSYIPRRSRRSCWKAAVENSENLHQLALQL  958 (1414)
T ss_pred             ccccccCCcccccccccccchhhhhhhhhhhcChhhHHHHHHHH
Confidence            88887776432211    11468999999999999999999877

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	138
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.5 bits (86), Expect = 8e-04
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 11/63 (17%)

Query: 19  QYSTNQIALNKTQRNEERDKKRHMSHKFSLTPTGEFKWAGPVHGPRNVLVNTLRATLLQL 78
           +    Q ++      E+RD+  + +  F+             +  R      LR  LL+L
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFA-----------KYNVSRLQPYLKLRQALLEL 147

Query: 79  ESS 81
             +
Sbjct: 148 RPA 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00