Diaphorina citri psyllid: psy5197

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
IYPKHDITNIVESSNYVKITNWCKVGHSKCKHTDWVKPYRCLEGPFQSDALLVPEHCVFDHIHNQSKCWEYERWNQTAAQSCLERDLSLRSFAMLLPCGISLFAGVEFVCCPMKDKERERFLEKQRKEVHKHEREELREEKARVKAAAEGRTYEPTGPSTPIPPGVDAHPPYSSQRHDTVQPAYAMSHDLSIGEPSYLRHEVRPRGDSKGVYVTVVFAGLAVMAAVFIAMTVLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIKDYDSYENIVSPSSGPASSTTTPTSTATTKSHATTRVPTPDPYFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKDETPGSLLSLTREAEEAILDKYKAQVIAMQEDFY
ccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEcccccccccccccccccEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccECcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccc
IYPKHDITNIVESSNYVKITNWCKVGHSKCKHTDWVKPYRCLEGPFQSDALLVPEHCVFDHIHNQSKCWEYERWNQTAAQSCLERDLSLRSFAMLLPCGISLFAGVEFVCCPM**********************************************************************************************SKGVYVTVVFAGLAVMAAVFIAMTVLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIKDYDSYENI*************************************************************************************************F*****************LIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYM***********************ILDKYKAQV********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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IYPKHDITNIVESSNYVKITNWCKVGHSKCKHTDWVKPYRCLEGPFQSDALLVPEHCVFDHIHNQSKCWEYERWNQTAAQSCLERDLSLRSFAMLLPCGISLFAGVEFVCCPMKDKERERFxxxxxxxxxxxxxxxxxxxxxxxxxxAEGRTYEPTGPSTPIPPGVDAHPPYSSQRHDTVQPAYAMSHDLSIGEPSYLRHEVRPRGDSKGVYVTVVFAGLAVMAAVFIAMTVLKRRSARSPQNLCNVFFYFQGFIEVDQAATPEERHVANMQINGYENPTYKYFEIKDYDSYENIVSPSSGPASSTTTPTSTATTKSHATTRVPTPDPYFTHFEPKDEHHAFKEALQRLEEMHREKVTKVMKDWSDLEERYQDMRSKSPGVAEDFKQKMTLRFQQTVQSLEEEGNAEKHQLIVMHQQRVAARINQHKKDAMNCYIEALNDVSLNTHKVQKCLQKLLRALHKDRHHTIAHYKHLLATNLDFAVKEKPMTLEHLVDIDHTINQSMTMLQRHPALAVKISELMQDYMQALRSKDETPGSLLSLTxxxxxxxxxxxxxxxxxxxxxFY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Beta-amyloid-like protein Probably corresponds to the protein encoded by the essential locus vnd, a gene required for embryonic nervous system development.confidentP14599

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0007616 [BP]long-term memoryprobableGO:0032501, GO:0044707, GO:0044708, GO:0050896, GO:0050890, GO:0007613, GO:0007610, GO:0007611, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0005576 [CC]extracellular regionprobableGO:0005575

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KTM, chain A
Confidence level:very confident
Coverage over the Query: 1-116
View the alignment between query and template
View the model in PyMOL
Template: 3K66, chain A
Confidence level:very confident
Coverage over the Query: 326-539
View the alignment between query and template
View the model in PyMOL
Template: 2LP1, chain A
Confidence level:very confident
Coverage over the Query: 208-238
View the alignment between query and template
View the model in PyMOL