Diaphorina citri psyllid: psy5252

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
MVGIGEASYSTIAPTIISDLFVKDLRSQMLAFFYFAIPIGSGLGYIVGSTAFSVMGAWPWSLRVTPVLGACAVLLILFFMEDPERGEAEGRVTEERTSFGEDIRALCKNHRETWIFLNLNWSIVADMTLYVVLPLRRSTAEAFQILISHAFGDAGSPYLIGLLSEMFRHSLQLGASTLVANAMLPSSLAPSLPFSSSNSTSLPLVSSLDETAHRSDEFLAHKSDEFLAHKSDEFLALQYALFITSFIEVLGGIFFLLGSLYIVQDRARANREIAGEDNPASNEDR
cCECccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHEEHEEEcccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
MVGIGEASYSTIAPTIISDLFVKDLRSQMLAFFYFAIPIGSGLGYIVGSTAFSVMGAWPWSLRVTPVLGACAVLLILFFME*****************FGEDIRALCKNHRETWIFLNLNWSIVADMTLYVVLPLRRSTAEAFQILISHAFGDAGSPYLIGLLSEMFRHSLQLGASTLVANAMLPSSLAPSLPFSSSNSTSLPLVSSLDETAHRSDEFLAHKSDEFLAHKSDEFLALQYALFITSFIEVLGGIFFLLGSLYIVQDRARA****************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxx
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MVGIGEASYSTIAPTIISDLFVKDLRSQMLAFFYFAIPIGSGLGYIVGSTAFSVMGAWPWSLRVTPVLGACAVLLILFFMEDPERGEAEGRVTEERTSFGEDIRALCKNHRETWIFLNLNWSIVADMTLYVVLPLRRSTAEAFQILISHAFGDAGSPYLIGLLSEMFRHSLQLGASTLVANAMLPSSLAPSLPFSSSNSTSLPLVSSLDETAHRSDEFLAHKSDEFLAHKSDEFLALQYALFITSFIEVLGGIFFLLGSLYIVQDRARANREIAGEDNPASNEDR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0001569 [BP]patterning of blood vesselsprobableGO:0048754, GO:0072359, GO:0001763, GO:0009653, GO:0007275, GO:0044699, GO:0007389, GO:0001525, GO:0001568, GO:0001944, GO:0048514, GO:0048729, GO:0060562, GO:0048646, GO:0032502, GO:0032501, GO:0035239, GO:0061138, GO:0060429, GO:0009888, GO:0044767, GO:0008150, GO:0035295, GO:0044707, GO:0048856, GO:0072358, GO:0048731, GO:0002009

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PW4, chain A
Confidence level:confident
Coverage over the Query: 1-258
View the alignment between query and template
View the model in PyMOL