Diaphorina citri psyllid: psy5297

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
MGTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYHTNV
cccccEEEccccccEEEEEccccccccccccccccCEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHcccccEEEccHHHHHHHcccccccEEEEEEEEEEEcccc
***GTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLY****
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MGTGTLVLNQCRHPIVELQGGVSYIPNDVYFKSGEVSFNLVTGPNMGGKSTYIRSIGVSVFLAQIGCFVPCDSATISVVDQIFTRVGAADSQYRGISTFMMEMKETATVIKKCTENSLVIIDELGRGTSTFDGFGMACSIARELASNRQPFTLFATHFHEIALLSRVIPTFRNVHESKYLYHTNV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DNA mismatch repair protein msh2 Involved in post-replicative DNA-mismatch repair. Binds to mismatch-containing DNA. Required for correct termination of copy synthesis during mating-type switching. Also required for proper chromosome organization during meiosis.confidentO74773
DNA mismatch repair protein MutS This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.confidentA6SXI2
DNA mismatch repair protein MutS This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.confidentB8CJQ5

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006301 [BP]postreplication repairprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:0044699, GO:0006281, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0048610 [BP]cellular process involved in reproductionprobableGO:0009987, GO:0008150, GO:0000003
GO:0045910 [BP]negative regulation of DNA recombinationprobableGO:0009892, GO:0010605, GO:0051052, GO:0019222, GO:0060255, GO:0031323, GO:0031324, GO:0080090, GO:0000018, GO:0050794, GO:0008150, GO:0019219, GO:0065007, GO:0051171, GO:0051172, GO:0048519, GO:0051053, GO:0050789, GO:0048523, GO:0045934
GO:0000403 [MF]Y-form DNA bindingprobableGO:0043566, GO:0097159, GO:0000217, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0000400 [MF]four-way junction DNA bindingprobableGO:0043566, GO:0097159, GO:0000217, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0000406 [MF]double-strand/single-strand DNA junction bindingprobableGO:0043566, GO:0097159, GO:0000217, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0000404 [MF]loop DNA bindingprobableGO:0043566, GO:0097159, GO:0000217, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0003690, GO:0032135, GO:1901363
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0022402 [BP]cell cycle processprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699, GO:0007049
GO:0032357 [MF]oxidized purine DNA bindingprobableGO:0032356, GO:0097159, GO:0003684, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0032143 [MF]single thymine insertion bindingprobableGO:0043566, GO:0097159, GO:0032138, GO:1901363, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0032135, GO:0003690
GO:0032137 [MF]guanine/thymine mispair bindingprobableGO:0043566, GO:0097159, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0003690, GO:1901363
GO:0000794 [CC]condensed nuclear chromosomeprobableGO:0031974, GO:0043229, GO:0043228, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0005694, GO:0000793, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0016447 [BP]somatic recombination of immunoglobulin gene segmentsprobableGO:0090304, GO:0034641, GO:0006807, GO:0007275, GO:0044699, GO:0006139, GO:0044260, GO:0071704, GO:1901360, GO:0002200, GO:0046483, GO:0032502, GO:0032501, GO:0044238, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0002440, GO:0002520, GO:0006310, GO:0002562, GO:0044707, GO:0048856, GO:0044237, GO:0043170, GO:0002376, GO:0002377, GO:0006259, GO:0048731, GO:0016445, GO:0016444
GO:0006298 [BP]mismatch repairprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:0044699, GO:0006281, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0006200 [BP]ATP catabolic processprobableGO:0046434, GO:0009141, GO:0009143, GO:0009144, GO:0009146, GO:0009166, GO:0009164, GO:0006807, GO:0044237, GO:0072521, GO:0072523, GO:0046130, GO:0009259, GO:1901360, GO:1901361, GO:0046700, GO:0006139, GO:1901575, GO:0006195, GO:0042278, GO:0071704, GO:0009199, GO:0006152, GO:0046483, GO:0044281, GO:0009207, GO:0009205, GO:0009987, GO:0009203, GO:0044238, GO:0046034, GO:0009154, GO:0006725, GO:0044710, GO:0009150, GO:0009261, GO:0019637, GO:0009117, GO:0009116, GO:0008152, GO:0034655, GO:0009119, GO:0046128, GO:0009056, GO:0055086, GO:0042454, GO:0044248, GO:1901564, GO:0044270, GO:1901136, GO:1901135, GO:0034641, GO:0019693, GO:0006163, GO:1901657, GO:0006796, GO:1901292, GO:0006793, GO:0019439, GO:0008150, GO:0006753, GO:1901658, GO:1901565
GO:0019899 [MF]enzyme bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0032405 [MF]MutLalpha complex bindingprobableGO:0032403, GO:0003674, GO:0005488, GO:0005515, GO:0032404
GO:0022414 [BP]reproductive processprobableGO:0008150, GO:0000003
GO:0043570 [BP]maintenance of DNA repeat elementsprobableGO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0044260, GO:1901360, GO:0016043, GO:0071704, GO:0071840, GO:0009987, GO:0006725, GO:0044763, GO:0008152, GO:0046483, GO:0006996, GO:0044238, GO:0051276, GO:0044237, GO:0043170, GO:0006259, GO:0008150
GO:0043531 [MF]ADP bindingprobableGO:0043168, GO:0017076, GO:0030554, GO:0097159, GO:0003674, GO:1901363, GO:1901265, GO:0043167, GO:0036094, GO:0032559, GO:0032553, GO:0032549, GO:0032555, GO:0005488, GO:0000166, GO:0032550, GO:0001883, GO:0001882
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0051096 [BP]positive regulation of helicase activityprobableGO:0051336, GO:0051345, GO:0051095, GO:0050790, GO:0050789, GO:0065007, GO:0044093, GO:0008150, GO:0019222, GO:0065009, GO:0043085
GO:0003697 [MF]single-stranded DNA bindingprobableGO:0043566, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0008094 [MF]DNA-dependent ATPase activityprobableGO:0016787, GO:0016818, GO:0042623, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0016887
GO:0032181 [MF]dinucleotide repeat insertion bindingprobableGO:0043566, GO:0003676, GO:0097159, GO:1901363, GO:0030983, GO:0003674, GO:0005488, GO:0032139, GO:0003677, GO:0032135, GO:0003690
GO:0032301 [CC]MutSalpha complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0032300, GO:0043227, GO:0043226, GO:0044422
GO:0032302 [CC]MutSbeta complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0032300, GO:0043227, GO:0043226, GO:0044422
GO:0019237 [MF]centromeric DNA bindingprobableGO:0043565, GO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:1901363
GO:0032142 [MF]single guanine insertion bindingprobableGO:0043566, GO:0097159, GO:0032138, GO:1901363, GO:0030983, GO:0003674, GO:0005488, GO:0003676, GO:0003677, GO:0032135, GO:0003690
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1WB9, chain A
Confidence level:very confident
Coverage over the Query: 3-87,99-182
View the alignment between query and template
View the model in PyMOL