Diaphorina citri psyllid: psy5333


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
MFNKCLLLLSLFSTCINSAHIGSHLNKEREEDGSFVSRDHNHYGQGGEHNTDFDHEAILDRYNNIPQEDGSFVSRDHNHYGQGGEHNTDFDHEAILGELIPATSKNQRPSPERIGSVKEAEEFEHLTTTLTGKSFKHGSYALFECYPWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHLIKEEL
cHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHHHHccHHHcccccccccccccccccccccc
**NKCLLLLSLFSTCINSAHI*************************GEHNTDFDHEAILDRY******************GQGGEHNTDFDHEAILGELIP***********************HLTTTLTGKSFKHGSYALFECYPWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGD*******QYIVE***KFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNP****EE*
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SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFNKCLLLLSLFSTCINSAHIGSHLNKEREEDGSFVSRDHNHYGQGGEHNTDFDHEAILDRYNNIPQEDGSFVSRDHNHYGQGGEHNTDFDHEAILGELIPATSKNQRPSPERIGSVKEAEEFEHLTTTLTGKSFKHGSYALFECYPWRNPIAGLKMQMKILTKKRLRLLLKNMDLNKDNNIDRKELQAWILRSFRMLSVEESNSRFEDADENTDGVVDWDEHLKETYGTEDADDIDVTNLGDDMNLLLLFTQMVKQDKMIFNAADGDKNGVLDKTEYQSFSAPEEHPHMFPILIKQVLEEKDTDKDGFLSFQEFMGDRGQKHNRQYIVEEKDKFDNEYDTNKDGLLNENEILSWIVPSNEDIAEEEVNHLFAASDDDHDDLLSFDEIVEHHDVFVGSEATDFGDHLTNPHLIKEEL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Reticulocalbin-2 Not known. Binds calcium.confidentQ8BP92
Reticulocalbin-2 Not known. Binds calcium.confidentQ14257
Reticulocalbin-2 Not known. Binds calcium.confidentQ62703

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MWU, chain A
Confidence level:very confident
Coverage over the Query: 253-352,373-397
View the alignment between query and template
View the model in PyMOL
Template: 3MWU, chain A
Confidence level:very confident
Coverage over the Query: 160-234,254-278,300-321
View the alignment between query and template
View the model in PyMOL
Template: 2BE4, chain A
Confidence level:very confident
Coverage over the Query: 119-235,251-358
View the alignment between query and template
View the model in PyMOL
Template: 1QXP, chain A
Confidence level:confident
Coverage over the Query: 118-143,162-247,262-394
View the alignment between query and template
View the model in PyMOL