Diaphorina citri psyllid: psy5352


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MVISSLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIALTRTRFVRRRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIAVGISFATYDFIYEALTKFFLISHQPKIGRVNK
cHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHccHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccc
MVISSLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIALTRTRFVRRRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIAVGISFATYDFIYEALTKFFLIS**********
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SSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVISSLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIALTRTRFVRRRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIAVGISFATYDFIYEALTKFFLISHQPKIGRVNK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Mitochondrial coenzyme A transporter SLC25A42 confidentQ86VD7
Mitochondrial coenzyme A transporter SLC25A42 confidentP0C546
Mitochondrial substrate carrier family protein P Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Required for the accumulation of coenzyme A in the mitochondrial matrix.confidentQ54DU1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044765 [BP]single-organism transportprobableGO:0051234, GO:0006810, GO:0008150, GO:0051179, GO:0044699
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0022857 [MF]transmembrane transporter activityprobableGO:0005215, GO:0003674
GO:0016020 [CC]membraneprobableGO:0005575
GO:0040010 [BP]positive regulation of growth rateprobableGO:0045927, GO:0040008, GO:0040009, GO:0065007, GO:0048518, GO:0008150, GO:0050789
GO:0005740 [CC]mitochondrial envelopeprobableGO:0031967, GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005739, GO:0031975, GO:0044446, GO:0044444, GO:0044429, GO:0005575, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2LCK, chain A
Confidence level:very confident
Coverage over the Query: 4-92,133-294
View the alignment between query and template
View the model in PyMOL