Psyllid ID: psy5352
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| 350425074 | 342 | PREDICTED: solute carrier family 25 memb | 0.826 | 0.736 | 0.464 | 2e-60 | |
| 340709326 | 338 | PREDICTED: solute carrier family 25 memb | 0.826 | 0.745 | 0.464 | 2e-59 | |
| 383861097 | 333 | PREDICTED: solute carrier family 25 memb | 0.826 | 0.756 | 0.464 | 4e-57 | |
| 307207979 | 348 | Solute carrier family 25 member 42 [Harp | 0.809 | 0.709 | 0.449 | 5e-56 | |
| 322788185 | 350 | hypothetical protein SINV_08016 [Solenop | 0.826 | 0.72 | 0.451 | 5e-56 | |
| 332374950 | 308 | unknown [Dendroctonus ponderosae] | 0.796 | 0.788 | 0.450 | 8e-56 | |
| 110750141 | 338 | PREDICTED: solute carrier family 25 memb | 0.836 | 0.754 | 0.444 | 1e-55 | |
| 380023330 | 338 | PREDICTED: solute carrier family 25 memb | 0.836 | 0.754 | 0.444 | 2e-55 | |
| 157106907 | 357 | mitochondrial solute carrier protein, pu | 0.813 | 0.694 | 0.445 | 2e-54 | |
| 24648424 | 365 | alternative testis transcripts open read | 0.813 | 0.679 | 0.420 | 3e-54 |
| >gi|350425074|ref|XP_003494003.1| PREDICTED: solute carrier family 25 member 42-like isoform 2 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 183/325 (56%), Gaps = 73/325 (22%)
Query: 2 VISSLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDAINFMIKSYKTEGITSLWRG 61
V +SLV+G IAGALAKTTIAPLDRTKINFQISN PFS A+ F++ + KTEG+ SLWRG
Sbjct: 50 VWTSLVSGAIAGALAKTTIAPLDRTKINFQISNQPFSAKAAVRFLVNTLKTEGLLSLWRG 109
Query: 62 NSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKT 121
NSAT+ RI+P+ A+QFTAHEQWKRIL GI G+
Sbjct: 110 NSATMVRIVPYSAVQFTAHEQWKRIL-------------------------GINGS---- 140
Query: 122 TIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLARARMAVTVKAERRMQTSSITK 181
+R K FLAGSLAG+TSQ ITYPLDL RARMAVT KAE + +
Sbjct: 141 -----EREKPGLN-----FLAGSLAGITSQGITYPLDLMRARMAVTQKAEYKTLRQIFVR 190
Query: 182 KRAD------------TILGV-------------LRDIYREEGVR-QGFFKGLSMNWIKG 215
+ T+LGV LR++ V GF L I G
Sbjct: 191 IYVEEGILAYYRGFTATLLGVIPYAGCSFFTYDLLRNLLNVHTVAIPGFSTSLICGAIAG 250
Query: 216 PIALTRT---RFVRRRMQTSSI----TKKRADTILGVLRDIYREEGVRQGFFKGLSMNWI 268
+A T + VRRRMQTS+I + TI + IY+EEG+ F+KGLSMNW+
Sbjct: 251 MVAQTSSYPLDIVRRRMQTSAIHGPMNSQHYHTITSTVTKIYKEEGI-MAFYKGLSMNWV 309
Query: 269 KGPIAVGISFATYDFIYEALTKFFL 293
KGPIAVGISFAT+D I +AL K +
Sbjct: 310 KGPIAVGISFATHDLIRDALRKLII 334
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340709326|ref|XP_003393261.1| PREDICTED: solute carrier family 25 member 42-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|383861097|ref|XP_003706023.1| PREDICTED: solute carrier family 25 member 42-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|307207979|gb|EFN85538.1| Solute carrier family 25 member 42 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
| >gi|322788185|gb|EFZ13967.1| hypothetical protein SINV_08016 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|332374950|gb|AEE62616.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
| >gi|110750141|ref|XP_396993.3| PREDICTED: solute carrier family 25 member 42-like isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|380023330|ref|XP_003695476.1| PREDICTED: solute carrier family 25 member 42-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|157106907|ref|XP_001649538.1| mitochondrial solute carrier protein, putative [Aedes aegypti] gi|108868766|gb|EAT32991.1| AAEL014753-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|24648424|ref|NP_650891.1| alternative testis transcripts open reading frame A, isoform A [Drosophila melanogaster] gi|45553431|ref|NP_996244.1| alternative testis transcripts open reading frame A, isoform C [Drosophila melanogaster] gi|23175997|gb|AAF55774.2| alternative testis transcripts open reading frame A, isoform A [Drosophila melanogaster] gi|45446559|gb|AAS65181.1| alternative testis transcripts open reading frame A, isoform C [Drosophila melanogaster] gi|60677811|gb|AAX33412.1| RE52377p [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 305 | ||||||
| FB|FBgn0067783 | 365 | att-ORFA "alternative testis t | 0.386 | 0.323 | 0.527 | 2.9e-50 | |
| ZFIN|ZDB-GENE-060825-313 | 326 | slc25a42 "solute carrier famil | 0.406 | 0.380 | 0.457 | 2.9e-44 | |
| UNIPROTKB|Q5PQ27 | 327 | slc25a42 "Mitochondrial coenzy | 0.442 | 0.412 | 0.423 | 4.7e-44 | |
| UNIPROTKB|Q05AQ3 | 327 | slc25a42 "Mitochondrial coenzy | 0.396 | 0.370 | 0.468 | 1.2e-43 | |
| RGD|1592346 | 318 | Slc25a42 "solute carrier famil | 0.393 | 0.377 | 0.488 | 1.2e-43 | |
| UNIPROTKB|P0C546 | 318 | Slc25a42 "Mitochondrial coenzy | 0.393 | 0.377 | 0.488 | 1.2e-43 | |
| MGI|MGI:1920345 | 318 | Slc25a42 "solute carrier famil | 0.393 | 0.377 | 0.488 | 1.2e-43 | |
| UNIPROTKB|F1NH71 | 300 | SLC25A42 "Uncharacterized prot | 0.406 | 0.413 | 0.465 | 1.8e-42 | |
| UNIPROTKB|Q86VD7 | 318 | SLC25A42 "Mitochondrial coenzy | 0.396 | 0.380 | 0.476 | 1.8e-42 | |
| UNIPROTKB|E1B8B9 | 318 | SLC25A42 "Uncharacterized prot | 0.396 | 0.380 | 0.468 | 1.8e-42 |
| FB|FBgn0067783 att-ORFA "alternative testis transcripts open reading frame A" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 67/127 (52%), Positives = 89/127 (70%)
Query: 2 VISSLVAGGIAGALAKTTIAPLDRTKINFQISNS-PFSFGDAINFMIKSYKTEGITSLWR 60
V+ SL++G AGALAKT IAPLDRTKINFQI N PFSF ++ ++ +Y EG+ +LWR
Sbjct: 72 VVISLISGAAAGALAKTVIAPLDRTKINFQIRNDVPFSFRASLRYLQNTYANEGVLALWR 131
Query: 61 GNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAK 120
GNSAT+ARI+P+ A+QFTAHEQW+RILHVD ++K +AG +AG ++
Sbjct: 132 GNSATMARIVPYAAIQFTAHEQWRRILHVDKDGTNTKG--------RRFLAGSLAGITSQ 183
Query: 121 TTIAPLD 127
+ PLD
Sbjct: 184 SLTYPLD 190
|
|
| ZFIN|ZDB-GENE-060825-313 slc25a42 "solute carrier family 25, member 42" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5PQ27 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q05AQ3 slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
|---|
| RGD|1592346 Slc25a42 "solute carrier family 25, member 42" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P0C546 Slc25a42 "Mitochondrial coenzyme A transporter SLC25A42" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1920345 Slc25a42 "solute carrier family 25, member 42" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NH71 SLC25A42 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q86VD7 SLC25A42 "Mitochondrial coenzyme A transporter SLC25A42" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1B8B9 SLC25A42 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 3e-19 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 3e-15 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 1e-14 | |
| pfam00153 | 96 | pfam00153, Mito_carr, Mitochondrial carrier protei | 1e-11 | |
| PTZ00169 | 300 | PTZ00169, PTZ00169, ADP/ATP transporter on adenyla | 1e-04 |
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 3e-19
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 2 VISSLVAGGIAGALAKTTIAPLDRTKINFQI--SNSPFSFGDAINFMIKSYKTEGITSLW 59
++SL+AGGIAGA+A T PLD K Q + + ++ K YK EGI L+
Sbjct: 5 FLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLY 64
Query: 60 RGNSATLARIIPHGALQFTAHEQWKRILH 88
+G L R+ P A+ F +E K++L
Sbjct: 65 KGLLPNLLRVAPAAAIYFGTYETLKKLLL 93
|
Length = 96 |
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein | Back alignment and domain information |
|---|
| >gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| KOG0764|consensus | 299 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0753|consensus | 317 | 100.0 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 100.0 | |
| KOG0754|consensus | 294 | 100.0 | ||
| KOG0760|consensus | 302 | 100.0 | ||
| KOG0758|consensus | 297 | 100.0 | ||
| KOG0757|consensus | 319 | 100.0 | ||
| KOG0759|consensus | 286 | 100.0 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 100.0 | |
| KOG0762|consensus | 311 | 100.0 | ||
| KOG0751|consensus | 694 | 100.0 | ||
| KOG0036|consensus | 463 | 100.0 | ||
| KOG0769|consensus | 308 | 100.0 | ||
| KOG0768|consensus | 323 | 100.0 | ||
| KOG0761|consensus | 361 | 100.0 | ||
| KOG0755|consensus | 320 | 100.0 | ||
| KOG0756|consensus | 299 | 100.0 | ||
| KOG0766|consensus | 297 | 100.0 | ||
| KOG0765|consensus | 333 | 100.0 | ||
| KOG0749|consensus | 298 | 100.0 | ||
| KOG0770|consensus | 353 | 100.0 | ||
| KOG0763|consensus | 301 | 100.0 | ||
| KOG0750|consensus | 304 | 100.0 | ||
| KOG0752|consensus | 320 | 100.0 | ||
| KOG0767|consensus | 333 | 99.98 | ||
| KOG0753|consensus | 317 | 99.96 | ||
| PTZ00169 | 300 | ADP/ATP transporter on adenylate translocase; Prov | 99.96 | |
| KOG0764|consensus | 299 | 99.96 | ||
| KOG0768|consensus | 323 | 99.96 | ||
| KOG0762|consensus | 311 | 99.96 | ||
| PTZ00168 | 259 | mitochondrial carrier protein; Provisional | 99.95 | |
| KOG0760|consensus | 302 | 99.95 | ||
| KOG0757|consensus | 319 | 99.95 | ||
| KOG0758|consensus | 297 | 99.94 | ||
| KOG0761|consensus | 361 | 99.94 | ||
| KOG0759|consensus | 286 | 99.93 | ||
| KOG0750|consensus | 304 | 99.92 | ||
| KOG0754|consensus | 294 | 99.92 | ||
| KOG0751|consensus | 694 | 99.9 | ||
| KOG0765|consensus | 333 | 99.89 | ||
| KOG0749|consensus | 298 | 99.89 | ||
| KOG0756|consensus | 299 | 99.89 | ||
| KOG0770|consensus | 353 | 99.89 | ||
| KOG0763|consensus | 301 | 99.87 | ||
| KOG0036|consensus | 463 | 99.86 | ||
| KOG0755|consensus | 320 | 99.86 | ||
| KOG1519|consensus | 297 | 99.84 | ||
| KOG0766|consensus | 297 | 99.84 | ||
| KOG0769|consensus | 308 | 99.81 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.75 | |
| KOG2745|consensus | 321 | 99.68 | ||
| KOG0767|consensus | 333 | 99.68 | ||
| PF00153 | 95 | Mito_carr: Mitochondrial carrier protein; InterPro | 99.62 | |
| KOG1519|consensus | 297 | 99.36 | ||
| KOG2954|consensus | 427 | 99.27 | ||
| KOG2745|consensus | 321 | 99.13 | ||
| KOG2954|consensus | 427 | 98.63 |
| >KOG0764|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-50 Score=340.38 Aligned_cols=241 Identities=26% Similarity=0.416 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHhcCC----CCCCcccHHHHHHHHHHhhCcccccccchhhHHHHhHHHHHHHH
Q psy5352 3 ISSLVAGGIAGALAKTTIAPLDRTKINFQISN----SPFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGALQFT 78 (305)
Q Consensus 3 ~~~~~aG~~ag~~~~~v~~Pld~iktr~Q~~~----~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~i~f~ 78 (305)
|+++++|.++|+++.+++||||++|+|+|++. ....|+++.+++++|++.||++|||||++|++++..+.+++||.
T Consensus 6 ~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~ 85 (299)
T KOG0764|consen 6 WEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFF 85 (299)
T ss_pred hhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHH
Confidence 57889999999999999999999999999982 35679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcccchhhHHHHHHhhhhccccchhhhhhccCcccccccchhhHHHHHHHHHHhhhHhhhcccHH
Q psy5352 79 AHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLD 158 (305)
Q Consensus 79 ~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~Pld 158 (305)
+||.+|.++...... ...++..++.+++.||+++.++++|++
T Consensus 86 ~Y~~~K~~~~~~~~~--------------------------------------~~l~~~~~l~sa~~AGa~t~~lTNPIW 127 (299)
T KOG0764|consen 86 FYDFLKSFITEGFNS--------------------------------------GLLSVLANLSSAAEAGAATTILTNPIW 127 (299)
T ss_pred HHHHHHHHHhcCCCc--------------------------------------ccchHHHHHHHHHhhhHHHHHhcCCeE
Confidence 999999999654330 235888999999999999999999999
Q ss_pred HHHHhhhccchhhhccccccccccccccHHHHHHHHHHhcCcccccccccc-----------------------------
Q psy5352 159 LARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLS----------------------------- 209 (305)
Q Consensus 159 vvktr~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~l~~G~~----------------------------- 209 (305)
|+|||++++..... ...|+++++++++++++||++| ||+|+.
T Consensus 128 VvKTRL~~Q~~~~~--------~~~Y~~~f~a~rki~k~EG~rg-LY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~~~ 198 (299)
T KOG0764|consen 128 VVKTRLMLQSKNVQ--------STAYKGMFDALRKIYKEEGFRG-LYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQGR 198 (299)
T ss_pred EEeehhhhhccccc--------ccccccHHHHHHHHHHHHhHHH-HHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhcCC
Confidence 99999998854321 1456699999999999999999 999991
Q ss_pred ---------ccc----ccccccc--c-hHHHHHHhhhcCcccccccCcHHHHHHHHHHhcCccccccccchhhhcccccc
Q psy5352 210 ---------MNW----IKGPIAL--T-RTRFVRRRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIA 273 (305)
Q Consensus 210 ---------~~~----l~~~~a~--t-P~dvvk~r~q~~~~~~~~~~~~~~~~~~i~~~eG~~~~ly~G~~~~~~~~~~~ 273 (305)
..+ ++-++|. + |.+|+|+|||.++. ..+|.++++|++++||+||++ |||||+.++++|.+|.
T Consensus 199 ~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~-~~~~~~~~~lIk~t~r~eG~~-GfYkG~~~nLvR~vPA 276 (299)
T KOG0764|consen 199 STDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQSD-NPRYRGVFDLIKKTWRNEGFR-GFYKGLATNLVRTVPA 276 (299)
T ss_pred CcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhccc-CcccccHHHHHHHHHHHhchh-hHHHHhHHHHhhcccc
Confidence 111 2222222 3 99999999999965 678999999999999999999 9999999999999999
Q ss_pred hhhhHhhHHHHHHHHHHhh
Q psy5352 274 VGISFATYDFIYEALTKFF 292 (305)
Q Consensus 274 ~~~~~~~ye~~~~~l~~~~ 292 (305)
+.++|.+||.++++|+...
T Consensus 277 ~~ITF~vyEnv~~~L~~~~ 295 (299)
T KOG0764|consen 277 ACITFLVYENVKHFLVTHR 295 (299)
T ss_pred ceeeeehHHHHHHHHhccc
Confidence 9999999999999998765
|
|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0752|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >KOG0753|consensus | Back alignment and domain information |
|---|
| >PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional | Back alignment and domain information |
|---|
| >KOG0764|consensus | Back alignment and domain information |
|---|
| >KOG0768|consensus | Back alignment and domain information |
|---|
| >KOG0762|consensus | Back alignment and domain information |
|---|
| >PTZ00168 mitochondrial carrier protein; Provisional | Back alignment and domain information |
|---|
| >KOG0760|consensus | Back alignment and domain information |
|---|
| >KOG0757|consensus | Back alignment and domain information |
|---|
| >KOG0758|consensus | Back alignment and domain information |
|---|
| >KOG0761|consensus | Back alignment and domain information |
|---|
| >KOG0759|consensus | Back alignment and domain information |
|---|
| >KOG0750|consensus | Back alignment and domain information |
|---|
| >KOG0754|consensus | Back alignment and domain information |
|---|
| >KOG0751|consensus | Back alignment and domain information |
|---|
| >KOG0765|consensus | Back alignment and domain information |
|---|
| >KOG0749|consensus | Back alignment and domain information |
|---|
| >KOG0756|consensus | Back alignment and domain information |
|---|
| >KOG0770|consensus | Back alignment and domain information |
|---|
| >KOG0763|consensus | Back alignment and domain information |
|---|
| >KOG0036|consensus | Back alignment and domain information |
|---|
| >KOG0755|consensus | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG0766|consensus | Back alignment and domain information |
|---|
| >KOG0769|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG0767|consensus | Back alignment and domain information |
|---|
| >PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] | Back alignment and domain information |
|---|
| >KOG1519|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
| >KOG2745|consensus | Back alignment and domain information |
|---|
| >KOG2954|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 305 | ||||
| 1okc_A | 297 | Structure Of Mitochondrial AdpATP CARRIER IN COMPLE | 3e-14 | ||
| 2lck_A | 303 | Structure Of The Mitochondrial Uncoupling Protein 2 | 1e-05 |
| >pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 | Back alignment and structure |
|
| >pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 305 | |||
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 1e-63 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 1e-23 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 3e-14 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 4e-14 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 1e-63
Identities = 71/337 (21%), Positives = 120/337 (35%), Gaps = 96/337 (28%)
Query: 2 VISSLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDA------INFMIKSYKTEGI 55
+ +AGG+A A++KT +AP++R K+ Q+ ++ I+ +++ K +G
Sbjct: 7 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGF 66
Query: 56 TSLWRGNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIA 115
S WRGN A + R P AL F +++K+I
Sbjct: 67 LSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGV------------------------ 102
Query: 116 GALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLARARMAVTVKAERRMQ 175
DR K ++ +G AG TS YPLD AR R+A
Sbjct: 103 -----------DRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAA--------D 143
Query: 176 TSSITKKRA-DTILGVLRDIYREEGVRQGFFKGLSMN----------------------- 211
+R + + I++ +G+R G ++G +++
Sbjct: 144 VGKGAAQREFTGLGNCITKIFKSDGLR-GLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLP 202
Query: 212 --------------WIKGPIALTRTR---FVRRRMQTSSITKKRA---DTILGVLRDIYR 251
+A + VRRRM S K + R I +
Sbjct: 203 DPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAK 262
Query: 252 EEGVRQGFFKGLSMNWIKGPIAVGISFATYDFIYEAL 288
+EG + FFKG N ++G + YD I + +
Sbjct: 263 DEGPK-AFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297
|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 100.0 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 100.0 | |
| 2lck_A | 303 | Mitochondrial uncoupling protein 2; membrane prote | 99.97 | |
| 1okc_A | 297 | ADP, ATP carrier protein heart isoform T1; mitocho | 99.97 |
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=344.81 Aligned_cols=239 Identities=23% Similarity=0.370 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHhcCCC---------CCCcccHHHHHHHHHHhhCcccccccchhhHHHHhHHHH
Q psy5352 4 SSLVAGGIAGALAKTTIAPLDRTKINFQISNS---------PFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGA 74 (305)
Q Consensus 4 ~~~~aG~~ag~~~~~v~~Pld~iktr~Q~~~~---------~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~ 74 (305)
.++++|++||+++.+++||||+||+|+|++.. ...|++.++++++++++||++|||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999865 246899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCcccchhhHHHHHHhhhhccccchhhhhhccCcccccccchhhHHHHHHHHHHhhhHhhhc
Q psy5352 75 LQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSIT 154 (305)
Q Consensus 75 i~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~ 154 (305)
++|.+||.+|+.+.+... ..+....+++|++||+++.+++
T Consensus 83 i~f~~ye~~k~~~~~~~~----------------------------------------~~~~~~~~~ag~~ag~~~~~~~ 122 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSE----------------------------------------HAGIGSRLLAGSTTGALAVAVA 122 (303)
T ss_dssp HTTTHHHHHHHHHSCCCS----------------------------------------SCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCc----------------------------------------CCcHHHHHHHHHHHHHHHHHHc
Confidence 999999999998864311 1345677899999999999999
Q ss_pred ccHHHHHHhhhccchhhhccccccccccccccHHHHHHHHHHhcCcccccccccc-------------------------
Q psy5352 155 YPLDLARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLS------------------------- 209 (305)
Q Consensus 155 ~Pldvvktr~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~l~~G~~------------------------- 209 (305)
+|+|++|+|+|++.... ....|.+.++++++++++||+++ ||||+.
T Consensus 123 ~Pld~vktrlq~~~~~~--------~~~~~~~~~~~~~~i~~~eG~~g-lyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~ 193 (303)
T 2lck_A 123 QPTDVVKVRFQAQARAG--------GGRRYQSTVEAYKTIAREEGIRG-LWKGTSPNVARNAIVNCAELVTYDLIKDTLL 193 (303)
T ss_dssp CHHHHHHHHHHHSCSCC--------CSSSCCCHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHhcccccC--------CCCCCCCHHHHHHHHHHhcChhh-hhCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999975320 11234599999999999999999 999991
Q ss_pred ----------cccccccccc-------chHHHHHHhhhcCcccccccCcHHHHHHHHHHhcCccccccccchhhhccccc
Q psy5352 210 ----------MNWIKGPIAL-------TRTRFVRRRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPI 272 (305)
Q Consensus 210 ----------~~~l~~~~a~-------tP~dvvk~r~q~~~~~~~~~~~~~~~~~~i~~~eG~~~~ly~G~~~~~~~~~~ 272 (305)
..++++++++ .|+|+||+|||.+.. ..|.+++||+++|+|+||++ +||||+.|+++|.+|
T Consensus 194 ~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~--~~y~~~~~~~~~i~~~eG~~-glyrG~~~~~~r~~p 270 (303)
T 2lck_A 194 KANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL--GQYHSAGHCALTMLRKEGPR-AFYKGFMPSFLRLGS 270 (303)
T ss_dssp TTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS--SSCCSHHHHHHHHHHSSCTH-HHHSCCHHHHHHHHH
T ss_pred hccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc--cccCCHHHHHHHHHHHcChH-HhhccHHHHHHHHHh
Confidence 2344555555 299999999999853 46899999999999999999 999999999999999
Q ss_pred chhhhHhhHHHHHHHHHHhhhc
Q psy5352 273 AVGISFATYDFIYEALTKFFLI 294 (305)
Q Consensus 273 ~~~~~~~~ye~~~~~l~~~~~~ 294 (305)
.++++|.+||.+++.+.+.+..
T Consensus 271 ~~~i~f~~ye~~k~~l~~~~~~ 292 (303)
T 2lck_A 271 WNVVMFVTYEQLKRALMAAYQS 292 (303)
T ss_dssp HHHHHHHHHHHHHSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999988766654
|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
| >2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} | Back alignment and structure |
|---|
| >1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 305 | ||||
| d1okca_ | 292 | f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta | 6e-21 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Score = 88.6 bits (218), Expect = 6e-21
Identities = 60/289 (20%), Positives = 106/289 (36%), Gaps = 18/289 (6%)
Query: 5 SLVAGGIAGALAKTTIAPLDRTKINFQISNSPFSFGDAINF------MIKSYKTEGITSL 58
+AGG+A A++KT +AP++R K+ Q+ ++ + +++ K +G S
Sbjct: 9 DFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSF 68
Query: 59 WRGNSATLARIIPHGALQFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGAL 118
WRGN A + R P AL F +++K+I + +L +GG AGA
Sbjct: 69 WRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQF----WRYFAGNLASGGAAGAT 124
Query: 119 AKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITYPLDLA--RARMAVTVKAERRMQT 176
+ + PLD + + A IT R + + +
Sbjct: 125 SLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIII 184
Query: 177 SSITKKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPIALTRTRFVRRRMQTSSITK 236
+ + + + ++ + G + VRRRM S K
Sbjct: 185 YRAAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAG-LVSYPFDTVRRRMMMQSGRK 243
Query: 237 KRADT---ILGVLRDIYREEGVRQGFFKGLSMNWIKGPIAVGISFATYD 282
+ R I ++EG + FFKG N ++G + YD
Sbjct: 244 GADIMYTGTVDCWRKIAKDEGPK-AFFKGAWSNVLRG-MGGAFVLVLYD 290
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 305 | |||
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 100.0 | |
| d1okca_ | 292 | ADP,ATP carrier protein {Cow (Bos taurus), heart i | 99.94 |
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Mitochondrial carrier superfamily: Mitochondrial carrier family: Mitochondrial carrier domain: ADP,ATP carrier protein species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00 E-value=2.2e-43 Score=312.43 Aligned_cols=238 Identities=28% Similarity=0.511 Sum_probs=199.8
Q ss_pred hHHHHHHHHHHHHHHhhccchHHHHHHHHhcCCC------CCCcccHHHHHHHHHHhhCcccccccchhhHHHHhHHHHH
Q psy5352 2 VISSLVAGGIAGALAKTTIAPLDRTKINFQISNS------PFSFGDAINFMIKSYKTEGITSLWRGNSATLARIIPHGAL 75 (305)
Q Consensus 2 ~~~~~~aG~~ag~~~~~v~~Pld~iktr~Q~~~~------~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~~i 75 (305)
+++++++|++||+++.+++||||+||+|+|+++. ...|++.++++++++++||+++||+|+.+.+++..+..++
T Consensus 6 ~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~ 85 (292)
T d1okca_ 6 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQAL 85 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccch
Confidence 5789999999999999999999999999999754 3458899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCcccchhhHHHHHHhhhhccccchhhhhhccCcccccccchhhHHHHHHHHHHhhhHhhhcc
Q psy5352 76 QFTAHEQWKRILHVDNTVDSSKLLTTFEMVISSLVAGGIAGALAKTTIAPLDRTKINFQNLYNRFLAGSLAGVTSQSITY 155 (305)
Q Consensus 76 ~f~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~ 155 (305)
+|.+||.+++.+.......+. ........+.+|.+|++++.++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~a~~~~~~~~~ 130 (292)
T d1okca_ 86 NFAFKDKYKQIFLGGVDRHKQ-----------------------------------FWRYFAGNLASGGAAGATSLCFVY 130 (292)
T ss_dssp HHHHHHHHHHHHHTTCCTTTC-----------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcccccccc-----------------------------------cchhhhhhhhhhhhhhhhHHhhhh
Confidence 999999999998865442211 233455678899999999999999
Q ss_pred cHHHHHHhhhccchhhhccccccccccccccHHHHHHHHHHhcCcccccccccc--------------------------
Q psy5352 156 PLDLARARMAVTVKAERRMQTSSITKKRADTILGVLRDIYREEGVRQGFFKGLS-------------------------- 209 (305)
Q Consensus 156 Pldvvktr~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~g~l~~G~~-------------------------- 209 (305)
|+|++|+|+|++..... ..+.+.+..+.+++++++||+++ ||+|+.
T Consensus 131 P~~~ik~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~G~~~-l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 202 (292)
T d1okca_ 131 PLDFARTRLAADVGKGA-------AQREFTGLGNCITKIFKSDGLRG-LYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD 202 (292)
T ss_dssp HHHHHHHHHHHCCCSST-------TTCSCSSHHHHHHHHHHHHCHHH-HTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG
T ss_pred hhhhhheeeeccccccc-------cccccccHHHHHHHhhhccchhh-hhccccccccceehHhhhhhhhccchhhhccc
Confidence 99999999998743221 12234589999999999999999 999991
Q ss_pred -------cccccccccc------c-hHHHHHHhhhcCccc---ccccCcHHHHHHHHHHhcCccccccccchhhhccccc
Q psy5352 210 -------MNWIKGPIAL------T-RTRFVRRRMQTSSIT---KKRADTILGVLRDIYREEGVRQGFFKGLSMNWIKGPI 272 (305)
Q Consensus 210 -------~~~l~~~~a~------t-P~dvvk~r~q~~~~~---~~~~~~~~~~~~~i~~~eG~~~~ly~G~~~~~~~~~~ 272 (305)
.+++++.+++ + |+||||+|||.+... ...|.+++||+++++|+||++ +||||+.||++|.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~-~lyrG~~~~~~r~i~ 281 (292)
T d1okca_ 203 PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPK-AFFKGAWSNVLRGMG 281 (292)
T ss_dssp GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGG-GGGTTHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcC-cccccHHHHHHHHHH
Confidence 2223333332 2 999999999998654 346889999999999999999 999999999999766
Q ss_pred chhhhHhhHHHH
Q psy5352 273 AVGISFATYDFI 284 (305)
Q Consensus 273 ~~~~~~~~ye~~ 284 (305)
.+++|.+||.+
T Consensus 282 -~~i~~~~ye~l 292 (292)
T d1okca_ 282 -GAFVLVLYDEI 292 (292)
T ss_dssp -HHHHHHHHHTC
T ss_pred -HHhhhhHhhcC
Confidence 68999999963
|
| >d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} | Back information, alignment and structure |
|---|