Diaphorina citri psyllid: psy5380


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLALR
cHHHHHcccccEEEEccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHcccc
MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLALR
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNHAINQGWIMYWGTSRWSPVEIMEAYSNCRQFNCATPIIEQTEYHMFCRDKAELYMPELYNKIGVGMMAWSPISMALISGKIEEFTVPVYPKSSKLVPKLNAAVMGEVERVLDNKPARPPMVSTLALR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Voltage-gated potassium channel subunit beta-2 Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.confidentP62482
Voltage-gated potassium channel subunit beta-2 Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.confidentP62483
Voltage-gated potassium channel subunit beta-2 Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.confidentQ27955

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050802 [BP]circadian sleep/wake cycle, sleepprobableGO:0032501, GO:0007623, GO:0007622, GO:0044707, GO:0044708, GO:0050896, GO:0048512, GO:0007610, GO:0048511, GO:0042745, GO:0008150, GO:0030431, GO:0044699, GO:0022410
GO:0007629 [BP]flight behaviorprobableGO:0007626, GO:0032501, GO:0044707, GO:0030534, GO:0044708, GO:0050896, GO:0007610, GO:0008150, GO:0008344, GO:0044699
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0051259 [BP]protein oligomerizationprobableGO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0044224 [CC]juxtaparanode region of axonprobableGO:0044304, GO:0044463, GO:0044464, GO:0005623, GO:0030424, GO:0005575, GO:0097458, GO:0043005, GO:0033267, GO:0042995
GO:0015459 [MF]potassium channel regulator activityprobableGO:0016247, GO:0003674
GO:0007268 [BP]synaptic transmissionprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0044699, GO:0003008

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LUT, chain A
Confidence level:very confident
Coverage over the Query: 1-128
View the alignment between query and template
View the model in PyMOL