Diaphorina citri psyllid: psy5462


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
MSQDRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM
ccccHHHHHHHHHccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccHHHHHccc
********HIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFD**SKRH*
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MSQDRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044281 [BP]small molecule metabolic processprobableGO:0044710, GO:0008150, GO:0008152
GO:0000166 [MF]nucleotide bindingprobableGO:0097159, GO:0036094, GO:0003674, GO:0005488, GO:1901363, GO:1901265
GO:0004022 [MF]alcohol dehydrogenase (NAD) activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016616, GO:0016491
GO:0044425 [CC]membrane partprobableGO:0005575, GO:0016020
GO:0044255 [BP]cellular lipid metabolic processprobableGO:0044238, GO:0044710, GO:0006629, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152
GO:0004745 [MF]retinol dehydrogenase activityprobableGO:0003824, GO:0003674, GO:0016614, GO:0016616, GO:0016491
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0050327 [MF]testosterone 17-beta-dehydrogenase (NAD+) activityprobableGO:0016229, GO:0016614, GO:0016616, GO:0033764, GO:0003824, GO:0003674, GO:0016491
GO:0050662 [MF]coenzyme bindingprobableGO:0003674, GO:0048037, GO:0005488
GO:0008209 [BP]androgen metabolic processprobableGO:0042445, GO:0044710, GO:0006629, GO:0044238, GO:0009987, GO:0044237, GO:0010817, GO:0071704, GO:0008150, GO:0008202, GO:0008152, GO:0065007, GO:0065008, GO:0034754, GO:1901360
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4G81, chain D
Confidence level:very confident
Coverage over the Query: 4-164
View the alignment between query and template
View the model in PyMOL