Psyllid ID: psy5462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MSQDRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM
Secondary Structure (PSIPRED)
cccHHHHHHHHHHccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHccccEEEEcccccccEccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEccHHHccEcccEHHHHHHHHHHEEHHHHHHHHHHHcccEEEEEccccEcccHHHHccHHHHHHHcccccHccc
Coil and Loop (DISEMBL)
msqdrttghihgilfipwclptkthVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDmlenntghivCISSIAALTAAVNVSAYFAskygvtenhpsikcfsgymlwgttvttplrsVTILYQRSVLTIQLLAFDKKSKRHM
Flexible Loop (DISEMBL)
msqdrttghihgilfipwclpTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLtiqllafdkkskrhm
Low Complexity Region (SEG)
MSQDRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM
Disordered region (IsUnstruct)
*******GHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAF********
Disordered Region (DISOPRED)
****R***HIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFD**SKRH*
Disordered Region (DISEMBL)
********HIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM
Disordered Region (DISPRO)
**********HGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFD*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSQDRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQLLAFDKKSKRHM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
A5PJJ7	316	Short-chain dehydrogenase	yes	N/A	0.681	0.392	0.392	3e-16
Q7TQA3	309	Epidermal retinol dehydro	yes	N/A	0.549	0.323	0.425	2e-15
A1L1W4	339	Retinol dehydrogenase 10-	yes	N/A	0.697	0.374	0.378	2e-15
Q05A13	316	Short-chain dehydrogenase	no	N/A	0.587	0.338	0.412	4e-15
Q80ZF7	341	Retinol dehydrogenase 10	no	N/A	0.642	0.343	0.394	2e-14
Q8VCH7	341	Retinol dehydrogenase 10	no	N/A	0.642	0.343	0.394	2e-14
Q8IZV5	341	Retinol dehydrogenase 10	yes	N/A	0.598	0.319	0.4	2e-14
Q8HZT6	341	Retinol dehydrogenase 10	no	N/A	0.598	0.319	0.4	2e-14
Q7T2D1	336	Retinol dehydrogenase 10-	no	N/A	0.598	0.324	0.4	3e-14
Q8N3Y7	309	Epidermal retinol dehydro	no	N/A	0.576	0.339	0.385	4e-14

>sp|A5PJJ7|S16C6_BOVIN Short-chain dehydrogenase/reductase family 16C member 6 OS=Bos taurus GN=SDR16C6 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 6/130 (4%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  D S++ ++ ++ + V+K +G V ILINNAG+V     L   DH +ER   VN+MS+ 
Sbjct: 91  YTCDCSNRQDVYRVADQVKKEVGNVTILINNAGVVTGREFLKTPDHMVERSFLVNVMSHF 150

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK---YGVTEN-HPSIKCFSGY 144
              + FLP MLE N GH+VCISS A +     +S Y ASK   YG  E+ H  +K     
Sbjct: 151 WTYKAFLPAMLEANHGHLVCISSFAGIVGINELSDYCASKFAAYGFAESLHFELKLLQKS 210

Query: 145 MLWGTTVTTP 154
            +  TT+  P
Sbjct: 211 KI-NTTIVCP 219

Bos taurus (taxid: 9913)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q7TQA3|RDHE2_MOUSE Epidermal retinol dehydrogenase 2 OS=Mus musculus GN=Sdr16c5 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  D S + E+ ++ + V+K +G V ILINNAGIV   + L   D  +E+  DVN  +++
Sbjct: 95  YTCDCSRREEVYRVADQVKKEVGDVSILINNAGIVTGRNFLDCPDDLMEKSFDVNFKAHL 154

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
            M + FLP M+ NN GH+VCISS A L     +S Y ASK+
Sbjct: 155 WMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKF 195

Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 5

>sp|A1L1W4|RD10A_DANRE Retinol dehydrogenase 10-A OS=Danio rerio GN=rdh10a PE=2 SV=1

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)

Query: 8   GHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS 66
           G + G+  +P   P +  V  Y   DV  +  +    E VR+ +G VD+LINNAG+V+  
Sbjct: 95  GAVGGVEEVP---PFQPQVYTYV-LDVGKRESVYSTAEKVRREVGEVDLLINNAGVVSGH 150

Query: 67  SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFA 126
            +L   D  IER M VN  ++    + FLP MLE N GHIV ++S   L +   V  Y A
Sbjct: 151 HLLECPDELIERTMVVNCHAHFWTTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCA 210

Query: 127 SKYGVTENHPSI 138
           SK+G    H S+
Sbjct: 211 SKFGAIGFHESL 222

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q05A13|S16C6_MOUSE Short-chain dehydrogenase/reductase family 16C member 6 OS=Mus musculus GN=Sdr16c6 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 2/109 (1%)

Query: 23  KTHVAVY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
           K  V V+ +K D S + E+ ++ + V++ +G V ILINNAG+V   S L   DH +E+  
Sbjct: 83  KGDVKVFAYKCDCSSRIEVYRVADQVKEEVGDVTILINNAGVVTGKSFLNTPDHLVEKSF 142

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
            VN +S+    + FLP M++ N GH+VCISSIA L     +S Y +SK+
Sbjct: 143 LVNAISHFWTCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYSSSKF 191

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q80ZF7|RDH10_RAT Retinol dehydrogenase 10 OS=Rattus norvegicus GN=Rdh10 PE=1 SV=1

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 21  PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERI 79
           P    V  Y   DV  +  +    E VRK +G V +L+NNAG+V+   +L   D  IER 
Sbjct: 107 PCNLQVFTY-TCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERT 165

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
           M VN  ++    + FLP MLE N GHIV ++S   L +   V  Y ASK+GV   H S+
Sbjct: 166 MMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESL 224

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8VCH7|RDH10_MOUSE Retinol dehydrogenase 10 OS=Mus musculus GN=Rdh10 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 2/119 (1%)

Query: 21  PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERI 79
           P    V  Y   DV  +  +    E VRK +G V +L+NNAG+V+   +L   D  IER 
Sbjct: 107 PCNLQVFTY-TCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERT 165

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
           M VN  ++    + FLP MLE N GHIV ++S   L +   V  Y ASK+GV   H S+
Sbjct: 166 MMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESL 224

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol (By similarity). Required for normal embryonic development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8IZV5|RDH10_HUMAN Retinol dehydrogenase 10 OS=Homo sapiens GN=RDH10 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  DV  +  +    E VRK +G V +L+NNAG+V+   +L   D  IER M VN  ++ 
Sbjct: 115 YTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHF 174

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
              + FLP MLE N GHIV ++S   L +   V  Y ASK+GV   H S+
Sbjct: 175 WTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESL 224

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8HZT6|RDH10_BOVIN Retinol dehydrogenase 10 OS=Bos taurus GN=RDH10 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  DV  +  +    E VRK +G V +L+NNAG+V+   +L   D  IER M VN  ++ 
Sbjct: 115 YTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHF 174

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
              + FLP MLE N GHIV ++S   L +   V  Y ASK+GV   H S+
Sbjct: 175 WTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESL 224

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q7T2D1|RD10B_DANRE Retinol dehydrogenase 10-B OS=Danio rerio GN=rdh10b PE=2 SV=2

 Score = 78.2 bits (191), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 30  FKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  DVS +  +    E VR ++G +D+LINNAG+V+   +L   D  IER M VN  ++ 
Sbjct: 110 YMCDVSKRESVYLTAEKVRSEVGDIDLLINNAGVVSGRHLLDCPDELIERTMMVNCHAHF 169

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
              + FLP MLE N GHIV ++S   L     V  Y ASK+G    H S+
Sbjct: 170 WTTKAFLPKMLELNHGHIVTVASSLGLFTTAGVEDYCASKFGAIGFHESL 219

Retinol dehydrogenase with a clear preference for NADP. Converts all-trans-retinol to all-trans-retinal. Has no detectable activity towards 11-cis-retinol, 9-cis-retinol and 13-cis-retinol.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 0

>sp|Q8N3Y7|RDHE2_HUMAN Epidermal retinol dehydrogenase 2 OS=Homo sapiens GN=SDR16C5 PE=2 SV=2

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 22  TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
           T+ H    +  D S K  + ++ + V+K +G V ILINNAGIV     L   D  +E+  
Sbjct: 90  TRVHA---YTCDCSQKEGVYRVADQVKKEVGDVSILINNAGIVTGKKFLDCPDELMEKSF 146

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
           DVN  +++   + FLP M+ N+ GH+VCISS A L+    ++ Y ASK+
Sbjct: 147 DVNFKAHLWTYKAFLPAMIANDHGHLVCISSSAGLSGVNGLADYCASKF 195

Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
328707668	324	PREDICTED: estradiol 17-beta-dehydrogena	0.582	0.327	0.495	9e-21
332373474	312	unknown [Dendroctonus ponderosae]	0.576	0.336	0.490	5e-19
442753851	385	Putative hydroxysteroid 17-beta dehydrog	0.560	0.264	0.456	2e-18
241743320	364	short-chain dehydrogenase, putative [Ixo	0.560	0.280	0.456	2e-18
307180161	312	Epidermal retinal dehydrogenase 2 [Campo	0.604	0.352	0.414	7e-17
383864620	316	PREDICTED: short-chain dehydrogenase/red	0.560	0.322	0.436	7e-17
254572235	316	Putative protein of unknown function wit	0.604	0.348	0.423	9e-17
357602501	327	short-chain dehydrogenase [Danaus plexip	0.576	0.321	0.415	9e-17
255731656	349	conserved hypothetical protein [Candida	0.648	0.338	0.403	1e-16
332030877	306	Short chain dehydrogenase/reductase fami	0.604	0.359	0.405	1e-16

>gi|328707668|ref|XP_001952321.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Acyrthosiphon pisum]

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A ++  +V++ +++ +L + V  K G VD+LINNAGIVAS+ ++  TD +I+R++DVNL+
Sbjct: 116 ADFYTTNVAEPSQVNELAKAVEEKWGKVDVLINNAGIVASAPLMDTTDEQIKRMIDVNLV 175

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           S+  MVR FLP M + N GHIV  SS+AA T A N+  Y A+KYGVT
Sbjct: 176 SHFWMVRAFLPAMRKRNEGHIVATSSVAAFTCAANIVPYAATKYGVT 222

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373474|gb|AEE61878.1| unknown [Dendroctonus ponderosae]

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  FK DVS++ E+    + +++ IG V ILINNAGI+   S L HT+ EI RIMD+N+M
Sbjct: 97  AYGFKVDVSNRQEVMDTAKKIQQDIGDVTILINNAGIMPHHSFLDHTEQEIRRIMDINVM 156

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            N   ++ FLP M ENN GHIV +SS+A     VN+  Y ASK+ V
Sbjct: 157 GNFWTLQAFLPKMKENNNGHIVSLSSMAGYVGLVNLVPYNASKFAV 202

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442753851|gb|JAA69085.1| Putative hydroxysteroid 17-beta dehydrogenase 11 [Ixodes ricinus]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F  DV+D+ ++KK+ + + R IG VDIL+NNAGI  S  +L    ++I R M+VN +S+ 
Sbjct: 105 FTCDVTDEDQVKKVAQKIGRLIGEVDILVNNAGIAQSMPILNMNPNQIRRTMEVNTLSHF 164

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             ++EFLP MLE   GHIV +SS+A L  A N + Y ASK+ +
Sbjct: 165 WTIQEFLPKMLERRKGHIVAVSSMAGLIGAANYTEYCASKFAI 207

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241743320|ref|XP_002412414.1| short-chain dehydrogenase, putative [Ixodes scapularis] gi|215505743|gb|EEC15237.1| short-chain dehydrogenase, putative [Ixodes scapularis]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F  DV+D+ ++KK+ + + R IG VDIL+NNAGI  S  +L    ++I R M+VN +S+ 
Sbjct: 105 FTCDVTDEDQVKKVAQKIGRLIGEVDILVNNAGIAQSMPILNMNPNQIRRTMEVNTLSHF 164

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             ++EFLP MLE   GHIV +SS+A L  A N + Y ASK+ +
Sbjct: 165 WTIQEFLPKMLERRKGHIVAVSSMAGLIGAANYTEYCASKFAI 207

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180161|gb|EFN68195.1| Epidermal retinal dehydrogenase 2 [Camponotus floridanus]

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 22  TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
           T T  A  ++ DVS + ++  + E V+K +G V IL+NNAGI+   + L HT  EI+RI 
Sbjct: 96  TGTTAAYAYQCDVSKREQVFSVAEKVKKEVGDVTILVNNAGIMPCHAFLDHTIDEIKRIF 155

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           D+N++++  M++ FLP M+E N GH+V +SS+A +    N+  Y ASK+ V
Sbjct: 156 DINVLAHFWMLQAFLPSMIEKNHGHVVALSSLAGIGGLPNLVPYCASKFAV 206

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864620|ref|XP_003707776.1| PREDICTED: short-chain dehydrogenase/reductase family 16C member 6-like [Megachile rotundata]

 Score = 92.4 bits (228), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +K DVS++ E+ ++ E +RK +G V ILINNAGI+ + ++L HT  EI+RI D+N+M++ 
Sbjct: 107 YKCDVSNREEVFQVAEVMRKEVGNVTILINNAGIMPTRNLLDHTPEEIKRIFDINVMAHF 166

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             ++ FLP M++ N GH+V +SS+A      N+  Y ASK+ V
Sbjct: 167 WTLQAFLPSMIQKNHGHVVALSSVAGFFGLPNLVPYCASKFAV 209

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|254572235|ref|XP_002493227.1| Putative protein of unknown function with similarity to acyl-carrier-protein reductases [Komagataella pastoris GS115] gi|238033025|emb|CAY71048.1| Putative protein of unknown function with similarity to acyl-carrier-protein reductases [Komagataella pastoris GS115] gi|328352759|emb|CCA39157.1| Retinol dehydrogenase 10-A [Komagataella pastoris CBS 7435]

 Score = 92.0 bits (227), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 1/111 (0%)

Query: 29  YFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           Y++ DVSD+ E+ KL++ VR ++G V ILINNAG     S+L  +  EIER + VNL+S+
Sbjct: 79  YYQCDVSDRREVLKLSKAVREQVGVVTILINNAGYTKGKSLLELSHDEIERTIKVNLLSS 138

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
              ++ FLP+ML+   G+I+ I S+    +   +SAY ASK G+   H S+
Sbjct: 139 FYTIKAFLPEMLKAKRGYIITIGSVLGYISPARLSAYGASKSGLVALHESL 189

Source: Komagataella pastoris GS115

Species: Komagataella pastoris

Genus: Komagataella

Family: Saccharomycetaceae

Order: Saccharomycetales

Class: Saccharomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|357602501|gb|EHJ63420.1| short-chain dehydrogenase [Danaus plexippus]

 Score = 92.0 bits (227), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  ++ DV+D+A + ++ E +R ++G V IL+NNAGI+    +L  T+ EI  + D+N+ 
Sbjct: 115 AFSYQCDVTDRAAVMQMAEKIRHEVGEVSILVNNAGIMPCKPLLNQTEKEIRLMNDINVN 174

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +N+ M++ FLP M+E N GHIV +SS+A L    N+  Y  SKY V
Sbjct: 175 ANLWMIQAFLPSMMERNHGHIVAMSSMAGLMGLRNLVPYCGSKYAV 220

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|255731656|ref|XP_002550752.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240131761|gb|EER31320.1| conserved hypothetical protein [Candida tropicalis MYA-3404]

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 1/119 (0%)

Query: 21  PTKTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERI 79
           P K     Y++ DVSD+ +I +  + V R+IG V +LINNAGI    +VL  +  EIE+ 
Sbjct: 73  PEKVPGVAYYQCDVSDRQQILQTQKMVQREIGVVTVLINNAGIATGKTVLDLSYLEIEKT 132

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
           + VNL+S+   ++ FLPDM+  N G+I+ I+S+    +   +SAY ASK G+   H S+
Sbjct: 133 IQVNLLSSFYTIKAFLPDMILKNRGYIITIASVLGYMSPARLSAYGASKSGLIALHESL 191

Source: Candida tropicalis MYA-3404

Species: Candida tropicalis

Genus: Candida

Order: Saccharomycetales

Class: Saccharomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|332030877|gb|EGI70513.1| Short chain dehydrogenase/reductase family 16C member 6 [Acromyrmex echinatior]

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 22  TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
           T T  A  ++ DVS++  +  + E V++ +G V IL+NNAGI+   + L HT  EI+RI 
Sbjct: 90  TGTAAAYAYQCDVSNREHVFSVAERVKQEVGNVTILVNNAGIMPCHAFLDHTTDEIKRIF 149

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           D+N++++  M++ FLP M+E N GH+V +SS+A +    N+  Y ASK+ V
Sbjct: 150 DINVLAHFWMLQAFLPSMIEKNHGHVVALSSLAGIGGIPNLVPYCASKFAV 200

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
UNIPROTKB|A5PJJ7	316	SDR16C6 "Short-chain dehydroge	0.681	0.392	0.392	1.6e-17
UNIPROTKB|E1BS37	299	HSD17B11 "Uncharacterized prot	0.598	0.364	0.4	2e-17
UNIPROTKB|F1NPQ5	285	F1NPQ5 "Uncharacterized protei	0.582	0.371	0.392	6.7e-17
CGD|CAL0003030	345	orf19.6502 [Candida albicans (	0.604	0.318	0.405	7.4e-17
RGD|1562060	316	Sdr16c6 "short chain dehydroge	0.587	0.338	0.422	1.6e-16
FB|FBgn0032405	318	CG14946 [Drosophila melanogast	0.571	0.327	0.377	2.9e-16
MGI|MGI:2668443	309	Sdr16c5 "short chain dehydroge	0.725	0.427	0.371	5.2e-16
RGD|1565999	309	Sdr16c5 "short chain dehydroge	0.549	0.323	0.425	5.2e-16
ZFIN|ZDB-GENE-070112-2242	339	rdh10a "retinol dehydrogenase	0.697	0.374	0.386	5.7e-16
MGI|MGI:2685269	316	Sdr16c6 "short chain dehydroge	0.587	0.338	0.412	6.2e-16

UNIPROTKB|A5PJJ7 SDR16C6 "Short-chain dehydrogenase/reductase family 16C member 6" [Bos taurus (taxid:9913)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 51/130 (39%), Positives = 73/130 (56%)

Query:    30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             +  D S++ ++ ++ + V+K +G V ILINNAG+V     L   DH +ER   VN+MS+ 
Sbjct:    91 YTCDCSNRQDVYRVADQVKKEVGNVTILINNAGVVTGREFLKTPDHMVERSFLVNVMSHF 150

Query:    89 KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK---YGVTEN-HPSIKCFSGY 144
                + FLP MLE N GH+VCISS A +     +S Y ASK   YG  E+ H  +K     
Sbjct:   151 WTYKAFLPAMLEANHGHLVCISSFAGIVGINELSDYCASKFAAYGFAESLHFELKLLQKS 210

Query:   145 MLWGTTVTTP 154
              +  TT+  P
Sbjct:   211 KI-NTTIVCP 219

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E1BS37 HSD17B11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 44/110 (40%), Positives = 68/110 (61%)

Query:    30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             F  D S + EI    E V+K IG V IL+NNAG++A++ +L+  DH++E+  +VN++++I
Sbjct:    90 FVVDCSKREEIYSAAEKVKKDIGDVSILVNNAGVIAAADLLSTQDHQVEKTFEVNILAHI 149

Query:    89 KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
                R FLP M+ NN GHIV ++S A       + AY ASK+     H ++
Sbjct:   150 WTTRAFLPTMMNNNHGHIVTVASAAGHFVIPFMVAYCASKFAAVGFHKAL 199

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NPQ5 F1NPQ5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 42/107 (39%), Positives = 68/107 (63%)

Query:    33 DVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
             D S + EI    E V+K IG V IL+NNAG++ ++ +L+  DH+IE++ +VN++++I   
Sbjct:    97 DCSKREEIYSAAEKVKKDIGDVSILVNNAGVITAADLLSTQDHQIEKMFEVNILAHIWTT 156

Query:    92 REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
             R FLP M++NN GHIV ++S A       + AY +SK+     H ++
Sbjct:   157 RAFLPTMMKNNHGHIVTVASAAGQFVTSFMVAYCSSKFAAVGFHKAL 203

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

CGD|CAL0003030 orf19.6502 [Candida albicans (taxid:5476)]

 Score = 210 (79.0 bits), Expect = 7.4e-17, P = 7.4e-17
 Identities = 45/111 (40%), Positives = 68/111 (61%)

Query:    29 YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
             ++K DVSD  ++ +  + VRK IG V +LINNAGI     VL  +  EIE+ + +NL+S+
Sbjct:    82 HYKCDVSDPQDVLRTQKLVRKEIGVVTVLINNAGIATGKPVLDLSFQEIEKTIQINLLSS 141

Query:    88 IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
                ++ FLPDM+    G+IV I+S+    +   +SAY ASK G+   H S+
Sbjct:   142 FYTIKAFLPDMMLRGRGYIVTIASVLGYMSPARLSAYGASKSGLIALHESL 192

GO:0005783 "endoplasmic reticulum" evidence=IEA

RGD|1562060 Sdr16c6 "short chain dehydrogenase/reductase family 16C, member 6" [Rattus norvegicus (taxid:10116)]

 Score = 205 (77.2 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 46/109 (42%), Positives = 68/109 (62%)

Query:    23 KTHVAVY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
             K  V V+ +K D S++ E+ ++ + VR+ +G V ILINNAGIV   S L   DH +E+  
Sbjct:    83 KGDVKVFAYKCDCSNRTEVYRVADQVREEVGDVTILINNAGIVTGKSFLDTPDHLVEKSF 142

Query:    81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
              VN +S+  + + FLP M+  N GH+VCISSIA +     +S Y +SK+
Sbjct:   143 LVNAISHFWICKTFLPAMINANHGHLVCISSIAGVVGINGLSDYSSSKF 191

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

FB|FBgn0032405 CG14946 [Drosophila melanogaster (taxid:7227)]

 Score = 203 (76.5 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 40/106 (37%), Positives = 64/106 (60%)

Query:    28 VY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             VY +  DVS + E+  L + ++  +G + +L+NN GI+ +  +L  +  EI+R+ DVN+ 
Sbjct:   107 VYSYSCDVSKRDEVTALADRIKSDVGCISVLVNNVGIMPTHPILQQSAEEIQRVFDVNVF 166

Query:    86 SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             S    ++ FLP M E   GHI+C+SSIA L    N+  Y A+K+ V
Sbjct:   167 SQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGISNLVPYCATKFAV 212

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

MGI|MGI:2668443 Sdr16c5 "short chain dehydrogenase/reductase family 16C, member 5" [Mus musculus (taxid:10090)]

 Score = 200 (75.5 bits), Expect = 5.2e-16, P = 5.2e-16
 Identities = 52/140 (37%), Positives = 78/140 (55%)

Query:    30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             +  D S + E+ ++ + V+K +G V ILINNAGIV   + L   D  +E+  DVN  +++
Sbjct:    95 YTCDCSRREEVYRVADQVKKEVGDVSILINNAGIVTGRNFLDCPDDLMEKSFDVNFKAHL 154

Query:    89 KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTENHPSIKCFSGYM 145
              M + FLP M+ NN GH+VCISS A L     +S Y ASK+   G  E+   I+  +   
Sbjct:   155 WMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKFAALGFAESM-FIETLAKKQ 213

Query:   146 LWG--TTVTTPLRSVTILYQ 163
              WG  TT+  P    T +++
Sbjct:   214 -WGIKTTIVCPFFIKTGMFE 232

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042572 "retinol metabolic process" evidence=ISO

GO:0042574 "retinal metabolic process" evidence=ISO

GO:0043616 "keratinocyte proliferation" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

RGD|1565999 Sdr16c5 "short chain dehydrogenase/reductase family 16C, member 5" [Rattus norvegicus (taxid:10116)]

 Score = 200 (75.5 bits), Expect = 5.2e-16, P = 5.2e-16
 Identities = 43/101 (42%), Positives = 62/101 (61%)

Query:    30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             +  D S + E+ ++ + V+K +G V ILINNAGIV     L   D  +E+ +DVN  +++
Sbjct:    95 YTCDCSQREEVYRVADQVKKEVGDVSILINNAGIVTGRKFLDCPDDLMEKSLDVNFKAHL 154

Query:    89 KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
              M + FLP M+ NN GH+VCISS A L     +S Y ASK+
Sbjct:   155 WMYKAFLPAMIANNHGHLVCISSSAGLIGVNGLSDYCASKF 195

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0004745 "retinol dehydrogenase activity" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0042572 "retinol metabolic process" evidence=ISO

GO:0042574 "retinal metabolic process" evidence=IEA;ISO

GO:0043616 "keratinocyte proliferation" evidence=IEA;ISO

ZFIN|ZDB-GENE-070112-2242 rdh10a "retinol dehydrogenase 10a" [Danio rerio (taxid:7955)]

 Score = 202 (76.2 bits), Expect = 5.7e-16, P = 5.7e-16
 Identities = 51/132 (38%), Positives = 70/132 (53%)

Query:     8 GHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS 66
             G + G+  +P   P +  V  Y   DV  +  +    E VRK +G VD+LINNAG+V+  
Sbjct:    95 GAVGGVEEVP---PFQPQVYTYV-LDVGKRESVYSTAEKVRKEVGEVDLLINNAGVVSGH 150

Query:    67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFA 126
              +L   D  IER M VN  ++    + FLP MLE N GHIV ++S   L +   V  Y A
Sbjct:   151 HLLECPDELIERTMVVNCHAHFWTTKAFLPKMLEMNHGHIVTVASSLGLFSTAGVEDYCA 210

Query:   127 SKYGVTENHPSI 138
             SK+G    H S+
Sbjct:   211 SKFGAIGFHESL 222

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0052650 "NADP-retinol dehydrogenase activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

MGI|MGI:2685269 Sdr16c6 "short chain dehydrogenase/reductase family 16C, member 6" [Mus musculus (taxid:10090)]

 Score = 200 (75.5 bits), Expect = 6.2e-16, P = 6.2e-16
 Identities = 45/109 (41%), Positives = 67/109 (61%)

Query:    23 KTHVAVY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM 80
             K  V V+ +K D S + E+ ++ + V++ +G V ILINNAG+V   S L   DH +E+  
Sbjct:    83 KGDVKVFAYKCDCSSRIEVYRVADQVKEEVGDVTILINNAGVVTGKSFLNTPDHLVEKSF 142

Query:    81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
              VN +S+    + FLP M++ N GH+VCISSIA L     +S Y +SK+
Sbjct:   143 LVNAISHFWTCKAFLPAMVKANHGHLVCISSIAGLVGINGLSDYSSSKF 191

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	182
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-36
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-31
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-25
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-23
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	4e-22
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-21
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-21
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-21
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	8e-21
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-20
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-20
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-20
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-19
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-19
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-19
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	4e-18
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-18
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-18
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	1e-17
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-17
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-17
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	4e-17
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-17
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-17
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-17
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-16
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-16
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-16
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-16
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	5e-16
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	7e-16
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	9e-16
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-15
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-15
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-15
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	2e-15
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-15
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	5e-15
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	5e-15
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	5e-15
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	7e-15
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	8e-15
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	9e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-14
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-14
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-14
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	1e-14
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-14
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-14
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-14
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-14
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-14
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-14
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	5e-14
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-14
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-14
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	7e-14
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	7e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-14
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	8e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	9e-14
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-13
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-13
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-13
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	3e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-13
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-13
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	5e-13
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	6e-13
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-13
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-12
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-12
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-12
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-12
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-12
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	3e-12
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	4e-12
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	4e-12
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-12
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-12
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	6e-12
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	6e-12
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-12
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	8e-12
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-11
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-11
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-11
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-11
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-11
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-11
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	3e-11
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	3e-11
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-11
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-11
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-11
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	7e-11
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	9e-11
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	9e-11
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-10
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-10
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-10
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-10
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-10
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-10
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-10
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-10
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-10
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	5e-10
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	7e-10
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-10
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	8e-10
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-09
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-09
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-09
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	5e-09
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-09
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	6e-09
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	7e-09
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	7e-09
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-09
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	9e-09
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-08
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	1e-08
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-08
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-08
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-08
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-08
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-08
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-08
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-08
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-08
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	5e-08
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-08
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	6e-08
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	6e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-08
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-07
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-07
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-07
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	3e-07
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-07
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-07
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-07
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	5e-07
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	7e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	8e-07
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	9e-07
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	1e-06
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-06
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-06
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-06
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-06
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-06
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	4e-06
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-06
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	6e-06
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	6e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	7e-06
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-05
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-05
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-05
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-05
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	4e-05
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	5e-05
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	7e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	7e-05
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	7e-05
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-04
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-04
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-04
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-04
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-04
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-04
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-04
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-04
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	6e-04
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	8e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	0.001
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	0.002
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	0.003
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.003
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	0.003
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	0.004
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  126 bits (320), Expect = 1e-36
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 13/128 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             Y+K DVS + E+ +  + ++K +G V ILINNAG+V+   +L   D EIE+  +VN +
Sbjct: 50  VHYYKCDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTL 109

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV------------TE 133
           ++    + FLPDMLE N GHIV I+S+A L +   ++ Y ASK                 
Sbjct: 110 AHFWTTKAFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAY 169

Query: 134 NHPSIKCF 141
             P IK  
Sbjct: 170 GKPGIKTT 177

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  112 bits (283), Expect = 3e-31
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  +ADVSD+ +++ L  E + + G +DIL+NNAGI     +   TD + +R++DVNL 
Sbjct: 48  AVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLT 107

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + R  LP M +   G IV ISS+A L      +AY ASK  +
Sbjct: 108 GVFLLTRAALPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAAL 153

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.8 bits (244), Expect = 2e-25
 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V   ADVSD  E+    E ++ ++G +DILINNAGI      L     E E+I+ VNLM
Sbjct: 58  VVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLM 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 R  LP M+E  +G I+ ISS A    A   SAY ASK+GV
Sbjct: 118 GVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGV 163

Length = 239

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 96.9 bits (242), Expect = 4e-25
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            + DV+D+  IK   + V +  G +D+L+NNAG      +   +  E+  + +VN+   +
Sbjct: 51  LELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPL 110

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ R FLP M +  +G IV +SS+A L     +  Y ASK  +
Sbjct: 111 RVTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAAL 153

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.1 bits (235), Expect = 4e-24
 Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  KADVS + +++ L  + V K G +DIL+NNAGI     V   TD E +R++DVNL 
Sbjct: 57  AIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLT 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + + R  LP M++  +G IV ISSI  L  A     Y ASK  V
Sbjct: 117 GVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV 162

Length = 247

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 92.3 bits (230), Expect = 3e-23
 Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 22  TKTHVAV-YFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERI 79
            KT V V    AD+SD   +++L + ++ + G +D+L+NNAG       L  +  E E +
Sbjct: 52  DKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEM 111

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +N+++  ++ +  LP M+E   GHI+ I S A L     ++ Y A+K  V
Sbjct: 112 IQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163

Length = 265

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 91.9 bits (229), Expect = 4e-22
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTD--HEIERIMDVN 83
           A  +  D++D A +    +++  + G+VD L+NNAG     SV   TD  H+ ER M VN
Sbjct: 422 AHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVN 481

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
               ++++   LP M E   GH+V +SSI   T A   SAY ASK
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK 526

Length = 657

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 1e-21
 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 2/108 (1%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
              +   ADV+D A ++   E    + G +D+++ NAGI +  SV         R++DVN
Sbjct: 57  DRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVN 116

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L+     VR  LP ++E   G+++ +SS+AA  AA  ++AY ASK GV
Sbjct: 117 LLGVFHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGV 163

Length = 296

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 85.8 bits (213), Expect = 6e-21
 Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           Y  AD+SD  E+++   + V K G  D+++N AGI         T  E ER MDVN   +
Sbjct: 58  YISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGS 117

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +    LP M E   GHIV +SS AAL      SAY  SK+ +
Sbjct: 118 LNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFAL 161

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 85.6 bits (213), Expect = 7e-21
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  + DVSD   +++  +E   + G VDIL+NNAGI   + ++   + + +R++D NL 
Sbjct: 57  ALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLT 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +     M++  +G I+ ISS+  L      + Y ASK GV
Sbjct: 117 GVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGV 162

Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 85.8 bits (213), Expect = 8e-21
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV+D+A ++   E    + G +DIL+NNAG+     +      + +R++D N+ 
Sbjct: 55  ALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVK 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
             +   R  LP M+E  +GHI+ + SIA        + Y A+K  V 
Sbjct: 115 GLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVR 161

Length = 246

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 85.2 bits (212), Expect = 1e-20
 Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DVSD+A ++ L    V   G +DIL+NNAGI   + +   ++ + +R++DVNL 
Sbjct: 56  ARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLT 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               +VR  LP M++   G IV ISS++ +T     + Y A+K GV
Sbjct: 116 GTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGV 161

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 84.9 bits (210), Expect = 2e-20
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 6/108 (5%)

Query: 27  AVYFKADVSDKAE-IKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVN 83
           A    ADVSD  E ++ L      + G +DIL+NNAGI    + +   T+ + +R++DVN
Sbjct: 59  AAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVN 118

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L+    + R  LP M +     IV ISS+A L      +AY ASK  +
Sbjct: 119 LLGAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAAL 163

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.1 bits (209), Expect = 3e-20
 Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   +ADV+DKA ++      V + G +DIL+NNAGI     +   +D E + ++DVNL 
Sbjct: 58  AQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLS 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               ++R  +P M +   G IV ISS+A L      S Y A+K G+
Sbjct: 118 GVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGL 163

Length = 249

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 83.5 bits (207), Expect = 4e-20
 Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHE--IERIMDVN 83
           A + + DV+   ++    +    K G VDILINNAGI+   S L         E+ +DVN
Sbjct: 51  ATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVN 110

Query: 84  LMSNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
           L   I      L  M +N  G    IV I S+A L  A     Y ASK+GV
Sbjct: 111 LTGVINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGV 161

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
               D+SD  + +++  E ++  G +DILINNAGI   S     +     +IM+VN    
Sbjct: 57  VVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + + +  LP ++E + G IV +SSIA        +AY ASK+ +
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHAL 160

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 33  DVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DVSD   ++   E VR   G  DI++NNAGI  +   L  +  + +R++DVNL   I   
Sbjct: 372 DVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGC 431

Query: 92  REFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           R F   M+E  T GHIV ++S AA   + ++ AY  SK  V
Sbjct: 432 RLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAV 472

Length = 582

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.2 bits (201), Expect = 3e-19
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 6/104 (5%)

Query: 29  YFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDVNLMSN 87
           + + D+SD  +++ L + V     VDIL N AGI+     +L  +  E + I D NL S 
Sbjct: 49  FLQLDLSD--DLEPLFDWVPS---VDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTST 103

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + R +LP MLE  +G I+ + SIA+  A    +AY ASK+ +
Sbjct: 104 FLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHAL 147

Length = 235

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 79.1 bits (195), Expect = 3e-18
 Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 9/121 (7%)

Query: 29  YFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           YFK DVS+K ++ K ++  + K G +DIL+NNAGI +  ++ A  + E +RI++VN+   
Sbjct: 48  YFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGI 107

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTEN-----HPSIK 139
             M +  +P ML+ + G I+ I+S+ +     N +AY  SK+   G+T +      P+I+
Sbjct: 108 FLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIR 167

Query: 140 C 140
           C
Sbjct: 168 C 168

Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 78.8 bits (195), Expect = 4e-18
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V    DV+D A     L+     +G +D+L+NNAG++     L   D    RI+DVN+ 
Sbjct: 52  VVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             I   +   P M+    GH+V ++S+A       ++ Y ASK+ V
Sbjct: 112 GVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAV 157

Length = 273

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 78.4 bits (194), Expect = 4e-18
 Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            +ADVSD+  ++ L E V  + G VDIL+NNAGI   + ++  ++ + + +++VNL    
Sbjct: 54  LEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVF 113

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + +  +  M++  +G I+ ISS+  L      + Y ASK GV
Sbjct: 114 NVTQAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGV 156

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.9 bits (192), Expect = 8e-18
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 30  FKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            K DV ++ ++KK  E V K  G VD+L+NNAGI+         + +  +++ +NL   I
Sbjct: 56  IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAI 115

Query: 89  KMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGV 131
               EFLP +  +  G IV I+S A + TAA   + Y  +K G+
Sbjct: 116 YTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGI 159

Length = 255

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 77.5 bits (191), Expect = 1e-17
 Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +Y  AD+S  A I+ +     R+ G VDIL+NNAGI   + +      + + I+ +NL 
Sbjct: 55  VLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLS 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +     R  LP M +   G I+ I+S+  L A+ N SAY A+K+GV
Sbjct: 115 AVFHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGV 160

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 1e-17
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A    AD++D A +++  +     +G +D L+NNAGI  S S         + +M+VN
Sbjct: 56  GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVN 115

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +     M+R  LP + ++  G IV ++S  AL  A  + AY ASK  V
Sbjct: 116 VRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAV 163

Length = 250

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 76.1 bits (188), Expect = 3e-17
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 26  VAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
            A+    DVSD+ ++K +  E   ++G +DIL+NNAGI   + ++   + + + ++D NL
Sbjct: 49  KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNL 108

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                + +  L  M++  +G I+ ISS+  L      + Y ASK GV
Sbjct: 109 TGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGV 155

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 76.2 bits (188), Expect = 4e-17
 Identities = 42/126 (33%), Positives = 55/126 (43%), Gaps = 19/126 (15%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +   AD++D  +I +L E      G VDIL+NNAG          TD +     D+ L+
Sbjct: 52  VLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLL 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSI----------------AALTAAV-NVSAYFASK 128
           S I++VR  LP M E   G IV ISS+                A L   V  +S   A  
Sbjct: 112 SVIRIVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELA-P 170

Query: 129 YGVTEN 134
            GVT N
Sbjct: 171 DGVTVN 176

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 7e-17
 Identities = 29/99 (29%), Positives = 49/99 (49%)

Query: 34  VSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVRE 93
           V  +A  + ++E  R+ G +D L+N AG     ++        +R+  VN+ + +   + 
Sbjct: 64  VDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKA 123

Query: 94  FLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            LP +  +  G IV I + AAL A   + AY A+K GV 
Sbjct: 124 ALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVA 162

Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.9 bits (185), Expect = 8e-17
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+   ADVSD+A+++      + + G VDIL+NNAG    +  L   D    +RI  VN+
Sbjct: 55  AIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNV 114

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            S     +  +P M     G IV ++S A L     +  Y ASK
Sbjct: 115 KSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK 158

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 75.1 bits (185), Expect = 9e-17
 Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  F  DVSD+  IK          G +DIL+NNAGI+         + E   ++DVNL 
Sbjct: 56  ATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLN 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +     M++   G I+ I S+ +      V AY ASK GV
Sbjct: 116 GVFFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGV 161

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 74.0 bits (182), Expect = 2e-16
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A +F  DV+D+     + +  R+  G +D+L+NNAGI+   +V   T  E  R++D+NL 
Sbjct: 53  ARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
                 R  +P M E   G I+ +SSI  L     ++AY ASK  V 
Sbjct: 113 GVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVR 159

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 73.3 bits (180), Expect = 4e-16
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+  + DV+D+ ++  L E  V + G +D+L+NNAG +  +  +  TD  + ++ M +NL
Sbjct: 51  ALALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINL 110

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                  R   P M+    G IV +SSIA  +      AY ASK  +
Sbjct: 111 RGTFLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAI 157

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 72.7 bits (179), Expect = 4e-16
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDV 82
               + + DV+D A I+   + V  K G +DIL+NNAGI       +    E     M  
Sbjct: 50  LSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKT 109

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           N    + + +  LP + ++  G IV +SS          SAY  SK  + 
Sbjct: 110 NFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSLT----SAYGVSKAALN 155

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 4e-16
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
           A++   DV+  AE+K L E      G +D   NNAGI      LA  ++ E + IM VN+
Sbjct: 58  ALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNV 117

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 ++  +P ML    G IV  +S+A L AA  +S Y ASK+ V
Sbjct: 118 KGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAV 164

Length = 253

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 72.9 bits (179), Expect = 5e-16
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
             DV+DK ++  L    ++ G +D+L N AG V   S+L   D + +  M++N+ S   M
Sbjct: 52  VLDVTDKEQVAAL---AKEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLM 108

Query: 91  VREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
           ++  LP ML    G I+ +SS+A+ +    N   Y  +K  V
Sbjct: 109 IKAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAV 150

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 72.2 bits (177), Expect = 7e-16
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 1/101 (0%)

Query: 32  ADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            DV+D+ ++    E  V  +G +DIL+NNAGI+    V      +  R++D NL+  +  
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               LP  L  N G IV ISS+A   A  N + Y A+K+GV
Sbjct: 119 THAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGV 159

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 72.3 bits (178), Expect = 9e-16
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIER 78
           L    +    +K DV+D A + ++ + + R+ G +D+L+N AGI+   ++ + +D + + 
Sbjct: 42  LRRYGYPFATYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQA 101

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
              VN      + +   P M    +G IV + S AA    + ++AY ASK
Sbjct: 102 TFAVNTFGVFNVSQAVSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASK 151

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADVSD +++ +L +   K  G VDIL+NNAG++    +   ++ E +R+  VN  
Sbjct: 55  AIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTK 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               +++E    + +   G I+ ISS        N  AY  SK  V
Sbjct: 115 GAFFVLQEAAKRLRDG--GRIINISSSLTAAYTPNYGAYAGSKAAV 158

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 1e-15
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             Y + DV D +++  L +    K G +D+++NNAG+ +       +  + +  + +NLM
Sbjct: 51  GFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLM 110

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +K  + FLP      +G IV I+S+A L     +S+Y  +K GV
Sbjct: 111 GVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGV 156

Length = 270

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            DV D+A +K      V   G +DIL+ NAGI   +      D + ER++DVNL     +
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
            +  LP ++    G IV  SS+A        ++ Y ASK G+
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGL 163

Length = 251

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 2/108 (1%)

Query: 26  VAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
           V  +   D+SD   +     ++    G +D+++N AGI A  +V   T  +  R++DVNL
Sbjct: 51  VPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNL 110

Query: 85  MSNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M  I ++  F+P M+     GH+V +SS A L A    +AY ASK+G+
Sbjct: 111 MGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL 158

Length = 272

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 71.0 bits (174), Expect = 3e-15
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            + DV+D  E  + L E   + G VDIL+NNAGI   S     +  E   +++ NL S  
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVF 116

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + +     M E   G I+ ISS+  L      + Y A+K G+
Sbjct: 117 NVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGM 159

Length = 245

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 70.4 bits (173), Expect = 5e-15
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 3/115 (2%)

Query: 20  LPTKTHVAVY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-I 76
           L  K  V V   + DVSD+  I+   EN+ +    +DIL+NNAG+          D E  
Sbjct: 44  LGAKFPVKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDW 103

Query: 77  ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           E ++D N+   + + R  LP M+  N GHI+ + SIA        + Y A+K  V
Sbjct: 104 ETMIDTNVKGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAV 158

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 5e-15
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 19  CLPTKTHVAVYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE 77
              T    A Y   D+S+   I   + E + + G  D+LINNAG+  +  +L     + +
Sbjct: 50  LRSTGVKAAAY-SIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQ 108

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            ++ +NL S  +     LP M     G I+ +SSIAA  A     AY  SK  +
Sbjct: 109 WVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL 162

Length = 241

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 70.1 bits (172), Expect = 5e-15
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADVS + ++  L    +++ G +DIL+NNAG+   +S    T  +  +++DVNL 
Sbjct: 55  AIAVQADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLT 114

Query: 86  SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 RE +    ++   G I+ +SS+           Y ASK GV
Sbjct: 115 GQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGV 161

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 69.8 bits (171), Expect = 7e-15
 Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 2/104 (1%)

Query: 30  FKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             AD+SD   IK L +  V + G++DIL+NNAGI+  +     ++ + + +M+VNL S  
Sbjct: 57  LTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVF 116

Query: 89  KMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + +      L+    G I+ I+S+ +    + V +Y ASK+ V
Sbjct: 117 FLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAV 160

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 68.0 bits (167), Expect = 8e-15
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 DV+D+  +  L   +    G +D +++NAG++    +   T    ER++   + 
Sbjct: 54  VTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVT 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               +        L    G  V  SS+A +  +   + Y A+   +
Sbjct: 114 GAWNLHELTRDLDL----GAFVLFSSVAGVLGSPGQANYAAANAAL 155

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 69.9 bits (172), Expect = 9e-15
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 33  DVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D   I   + +     G +D+L+NNAG     ++      E+ R  +VN+   + M 
Sbjct: 58  DVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMT 117

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTE 133
           +  LP M     GHIV I+S+  L     +  Y  SK+   G++E
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISE 162

Length = 277

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 1e-14
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 32  ADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTD--HEIERIMDVNLMSNI 88
            D+SD   +  L  +V ++IG VDILINNAG      +    D  H++ER M +N  + +
Sbjct: 96  CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPL 155

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNV-SAYFASK 128
           +++R   P MLE   GHI+ +++   L+ A  + S Y ASK
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASK 196

Length = 293

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 69.3 bits (170), Expect = 1e-14
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV   ADV+DK +++ L +  V K G  D+++NNAGI   + +L  T+ +++++  VN+ 
Sbjct: 54  AVAVGADVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVF 113

Query: 86  SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  ++       +  + G I+  SSIA +    N+ AY ASK+ V
Sbjct: 114 GVLFGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAV 160

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 68.5 bits (168), Expect = 1e-14
 Identities = 26/100 (26%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 33  DVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           D  D  + + L + +R   G +D+L++NAGI   +++   +D E+E    +N+++  ++ 
Sbjct: 53  DARDPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELT 112

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  LP + E  +G +V ++S++        + Y ASK+ +
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFAL 152

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+    DVSD    ++L E  V + G +DIL+NNAGI   S     TD  + ER+M VN 
Sbjct: 52  ALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY 111

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  +      LP +  +  G IV +SS+A LT     S Y ASK+ +
Sbjct: 112 LGAVYCTHAALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHAL 157

Length = 263

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 4/99 (4%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNIK 89
           + DV+D   IK       +   VD++INNAG++  +++L     E +++ MDVN+   ++
Sbjct: 56  RLDVTDPESIKAAAA---QAKDVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR 112

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           + + F P +  N  G IV ++S+A+L     +  Y ASK
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASK 151

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           DV D   +    E V +  +VD+L+ NAG+     + A ++  +  + DVN+   ++M++
Sbjct: 61  DVCDSKSVAAAVERVTE-RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRMLQ 119

Query: 93  EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            FLPDM    +G I+  SS+  L        Y ASK+ +
Sbjct: 120 AFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFAL 158

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 28  VYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
            + + D++     +K+  E + + G +DIL+NNAG +  + +L + D +   +MD+NL S
Sbjct: 66  TFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNS 125

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              + +     M +  +G I+ I+S+ +      V AY ASK+GV
Sbjct: 126 VYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGV 170

Length = 258

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A+    DV+D+  I    +  V   G VDIL+NNAGI   + +      + ++++ + 
Sbjct: 53  GKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIM 112

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L       +  LP M     G I+ ++S+  L  +   +AY ++K+G+
Sbjct: 113 LDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL 160

Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 3e-14
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 32  ADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVA-SSSVLAHTDHEIERIMDVNLMSNIK 89
           ADV+D A+++++ +  V + G +D+L+NNAGI   +  +   T  + E+ + VNL     
Sbjct: 65  ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 90  MVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
             R  +P +  +  G ++   S  A        + Y ASK+ V
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV 167

Length = 264

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 68.0 bits (167), Expect = 3e-14
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNIK 89
           + DV+D A +            V IL+NNAGI  + S+L   D + +   M+ N    + 
Sbjct: 55  QLDVTDPASVAAA---AEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLA 111

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           M R F P +  N  G IV + S+ +     N+  Y ASK
Sbjct: 112 MARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK 150

Length = 238

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 69.1 bits (169), Expect = 4e-14
 Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 25  HVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVA--SSSVLAHTDHEIERIMD 81
           H A     DVSD+A+I++  E + R+ G +D+L+NNAG+     ++ L  T  E  R+  
Sbjct: 53  HHA--LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQA 110

Query: 82  VNLMSNIKMVREFLPDMLENNTGH-IVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC 140
           +NL     + RE L  M+E   G  IV ++S A L A    +AY ASK  V     S+ C
Sbjct: 111 INLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLAC 170

Length = 520

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 67.7 bits (165), Expect = 5e-14
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV  + E+  L +E  R +G+VD++ +NAGIV    ++  T  +   ++DV+L  +I  V
Sbjct: 63  DVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTV 122

Query: 92  REFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
             FLP +LE  T GH+V  +S A L     + AY  +KYGV
Sbjct: 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV 163

Length = 275

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 67.4 bits (165), Expect = 6e-14
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +Y  ADV+ + EI  +      + G +DIL+NNAGI   + +      + +RI+ V L 
Sbjct: 52  VIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLT 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S    +R  LP M +   G I+ I+S   L A+   SAY A+K+G+
Sbjct: 112 SAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGL 157

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 67.0 bits (164), Expect = 6e-14
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  +ADVS   +++++   V+ + G +D+L++NA   A   +   T    +  M+ NL 
Sbjct: 50  AVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLK 109

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           + +   ++    M E   G IV ISS+ ++ A  N  A   +K
Sbjct: 110 ALVHCAQQAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAK 152

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 7e-14
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 15/143 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  +  DV+D+  ++ +   + K +G +DIL+NNAGI+    +L  +  +  +++D++L 
Sbjct: 61  AHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLN 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG---VTENHPS----- 137
           +   + +  +P M++   G I+ I S+ +      VSAY A+K G   +T+N  S     
Sbjct: 121 APFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEA 180

Query: 138 -IKCFS---GYMLWGTTVTTPLR 156
            I+C     GY+   T  T PLR
Sbjct: 181 NIQCNGIGPGYI--ATPQTAPLR 201

Length = 265

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 67.4 bits (165), Expect = 7e-14
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+ +A++  L +  V ++G +D+L+NNAG+   + V+  TD E  R++DV L    +  
Sbjct: 77  DVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRAT 136

Query: 92  REFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  L  M      G IV  +S+    A    + Y A+K GV
Sbjct: 137 RAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGV 177

Length = 262

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 67.3 bits (165), Expect = 7e-14
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            + DVSD A+++ L +    + G V +L NNAG+ A   V  ++  + E ++ VNL   I
Sbjct: 60  VRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVI 119

Query: 89  KMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
             VR F P ML          GHIV  +S+A L A   +  Y  SK+ V
Sbjct: 120 HGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAV 168

Length = 287

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 66.6 bits (163), Expect = 8e-14
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 2/104 (1%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
           A+  +ADV+ +A+++ + E  + K G +DIL+NNAGI   +  +    + E +R+  VN+
Sbjct: 53  AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNV 112

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            S     +  +P M E   G I+ I+S A L     ++ Y ASK
Sbjct: 113 KSIYLSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASK 156

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 67.0 bits (164), Expect = 9e-14
 Identities = 30/99 (30%), Positives = 50/99 (50%)

Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           DV+D+  I      +++IG +D+L+NNAG      V      E  +  + N+   I + +
Sbjct: 62  DVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQ 121

Query: 93  EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             LP M +  +G I+ ISSI+       +S Y +SKY +
Sbjct: 122 AVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL 160

Length = 280

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 8/110 (7%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV +K DVSDK ++    +    K G  D+++NNAG+   + +L  T+ E++++ +VN+ 
Sbjct: 51  AVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVK 110

Query: 86  SNI----KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +       R+F     + + G I+  +SIA       +SAY ++K+ V
Sbjct: 111 GVLFGIQAAARQFKK---QGHGGKIINAASIAGHEGNPILSAYSSTKFAV 157

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 67.2 bits (165), Expect = 2e-13
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 26  VAVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
            A+    DV+D+A ++    E     G VDI+++NAGI  S  +   +D +  R  DVN 
Sbjct: 471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA 530

Query: 85  MSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASK 128
             +  + RE +  M     G  IV I+S  A+    N  AY A+K
Sbjct: 531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK 575

Length = 681

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 66.0 bits (161), Expect = 2e-13
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 31  KADVSDKAEIKK-LNENVRKIGYVDILINNAGIVA-SSSVLAHTDHEIERIMDVNLMSNI 88
           KADVSD+A+++  ++  V + G +D   NNAGI    +        E ++++ +NL    
Sbjct: 60  KADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVF 119

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + + L  M E  +G IV  +S+  +    N S Y A+K+GV
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGV 162

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 65.3 bits (159), Expect = 3e-13
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F A++SD+ E+K L +     +  VDIL+NNAGI      +  +D + + +++VNL +  
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATF 116

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ RE    M+    G I+ I+S+  +T     + Y ASK G+
Sbjct: 117 RLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGM 159

Length = 245

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 33  DVSDK-AEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D+ A    +   V   G +DI++NNAG      +   T+ E    +D N    + + 
Sbjct: 57  DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVT 116

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  LP + E  +GHI+ ISSI  ++A      Y ASK+ +
Sbjct: 117 QAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWAL 156

Length = 275

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 5e-13
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +   ADV+D A +   +       G +D+L+NNAGI   +  LA TD +  R   V+L 
Sbjct: 60  VLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLD 119

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 R  LP M+E   G IV I+S  A         Y  +K+G+
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGL 165

Length = 260

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 64.3 bits (157), Expect = 5e-13
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A     D  D+ E+  L + + + IG +++L+ NAG      +L  T    E++ ++ 
Sbjct: 49  GSAKAVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMA 108

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                   RE    ML    G I+   + A+L      +A+  +K+ +
Sbjct: 109 AFGGFLAAREAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFAL 156

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 6e-13
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 32  ADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            DV D A  +  L+  V + G +DIL+NNAGI   ++    +  E + ++DVNL     +
Sbjct: 66  FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNV 125

Query: 91  VREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +  LP M+     G IV I+S+A +        Y ASK G+
Sbjct: 126 TQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGL 167

Length = 249

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 64.5 bits (157), Expect = 7e-13
 Identities = 31/107 (28%), Positives = 62/107 (57%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  KADV D AE++  + + V + G +D+++ NAG+++       ++ + + ++D+NL 
Sbjct: 67  VLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLT 126

Query: 86  SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +  +  +P M+E  N G I+  SS+A L A   ++ Y A+K+G+
Sbjct: 127 GVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGL 173

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 63.6 bits (155), Expect = 1e-12
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A+   ADV+D A++++  +  V + G +D  +NNAG+         T  E  R+ DVN
Sbjct: 49  GEAIAVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVN 108

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + ++      LP +     G ++ + S+    +A   +AY ASK+ V
Sbjct: 109 YLGHVYGTLAALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAV 156

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 63.6 bits (155), Expect = 1e-12
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 26  VAVYFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
           VA     DV+D+A+    L +    +G + +L+NNAG+ +  ++      E  R+M +N+
Sbjct: 52  VAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINV 111

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            S     +  LP +  +    IV ISS+AA  A  + +AY ASK  V 
Sbjct: 112 ESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA 159

Length = 251

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           + DV D A I+     +   G  D L+N AGI +  S L  T    +R+M VN      +
Sbjct: 59  RLDVGDDAAIR---AALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALV 115

Query: 91  VREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
            R     M+     G IV +SS AAL    +  AY ASK  +
Sbjct: 116 ARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAAL 157

Length = 245

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 39/113 (34%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIER 78
           L  + H     +ADVS   +  +L  E V   G VDIL+NNAGI    +       + ER
Sbjct: 51  LGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWER 110

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++DVNL S        LP + E   G I+ ISSI         + Y A+K G+
Sbjct: 111 VIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGM 163

Length = 247

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 62.8 bits (153), Expect = 2e-12
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV D+ +++ L    V + G +DIL+NNAG +  S V        + +  VNL 
Sbjct: 66  ALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVNLR 125

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +  LP M++   GHI+ IS   +L  A    AY A K G+
Sbjct: 126 GTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGM 171

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 62.6 bits (153), Expect = 3e-12
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F  DVSD A + ++ + +  + G +D+L+N AGI+   +  + +D + ++   VN     
Sbjct: 53  FVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAF 112

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            + R  +P      +G IV + S AA    + ++AY ASK
Sbjct: 113 NLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK 152

Length = 252

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 62.2 bits (152), Expect = 4e-12
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSS----VLAHTDHEIERIMD 81
             +  AD++       +   V +  G VDIL++  G   SS+      A TD E +  ++
Sbjct: 51  VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLG--GSSAPAGGFAALTDEEWQDELN 108

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASK 128
           +NL++ +++ R  LP M+   +G I+ ++SI   L    + +AY A+K
Sbjct: 109 LNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAK 156

Length = 260

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 32  ADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            DVS ++E ++L + V     G ++IL+NNAG         +T+ +   IM  N  +   
Sbjct: 62  CDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYH 121

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC 140
           + R   P +  +  G+IV ISS+A + A  + + Y A+K  + +   S+ C
Sbjct: 122 LSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLAC 172

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 62.0 bits (151), Expect = 4e-12
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 25  HVAVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
            V V    DV+D+      + E   ++G +D++I NAG+   +S+   +       +D N
Sbjct: 48  SVEV-EILDVTDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTN 106

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           L+    ++   LP       GH+V ISS+AAL      +AY ASK  ++
Sbjct: 107 LLGAAAILEAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALS 155

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 6e-12
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D A ++ + +     +G +D++++NAG     +    +D +I R +D NL+ +I+++
Sbjct: 56  DVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  LP +     G IV +SS     A    S Y A+K+G+
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGI 155

Length = 276

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  + DV+ +A+++    + V + G +DI+++NAGI  SS +   +  +  R MD+NL 
Sbjct: 51  ALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLT 110

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASK 128
            +  + RE    M      G+IV  +S  A+    N +AY A+K
Sbjct: 111 GHFLVSREAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAK 154

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 61.7 bits (150), Expect = 6e-12
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 1/107 (0%)

Query: 26  VAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
            A   + DV     ++ L + V  + G +D+L+NNAG     +V+   + + + +M VN+
Sbjct: 54  RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNV 113

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                  +  +P M     G IV  +S  AL      +AY ASK  +
Sbjct: 114 GGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAI 160

Length = 252

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +   ADVS +   + L    + + G  DIL+NNAG+   S  L   D  I++ +  +  
Sbjct: 58  GIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFK 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S I   +E   +M E   G IV I+S+A +  A  +S Y A K  V
Sbjct: 118 SVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMKAAV 161

Length = 252

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 8e-12
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 9/104 (8%)

Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDH----EIERIMDVNLMSN 87
           DV+D A ++   + V  + G +D+L+NNAG+     +    +     + + + D N+   
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAGV----GLAGAAEESSIAQAQALFDTNVFGI 108

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++M R  LP M    +G I+ ISS+     A  ++ Y ASK+ V
Sbjct: 109 LRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAV 152

Length = 270

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
              DVSD   ++     V    G +DIL+N+AG+   +     ++ + ++ +D+NL  + 
Sbjct: 66  LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            M +     M+    G IV ++S A + A     AY ASK GV
Sbjct: 126 LMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGV 168

Length = 255

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A++  ADV+D+A+I++L  E + + G+VDIL+NNAG    +    H     +++M++N+ 
Sbjct: 63  ALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVR 122

Query: 86  SNIKMVREFLPD-MLENNTGHIVCISSIAAL----TAAVNVSAYFASKYGV 131
               + +      M+    G I+ ++S+A L       ++  AY  SK  V
Sbjct: 123 GLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAV 173

Length = 259

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 61.4 bits (149), Expect = 2e-11
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA-HTDHEIERIMDVNLMSN 87
            +AD++D+A ++     ++   G +D+L+NNAGI          +  +  R+ DVNL   
Sbjct: 320 VQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGA 379

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
               R     M  +  G IV + SIA+L A    +AY ASK  VT
Sbjct: 380 FACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVT 422

Length = 520

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNIK 89
           AD+   A  + +    V + G VD+LINN G    +    H + E IE  +  +L   + 
Sbjct: 59  ADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLW 118

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             R  LP MLE   G IV +SSIA  T  +    Y A+K GV
Sbjct: 119 CCRAVLPHMLERQQGVIVNVSSIA--TRGIYRIPYSAAKGGV 158

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 30  FKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           ++ D+S++ +I  +   +R     VD+ INNAG+     +L+      + + DVN+++  
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALS 120

Query: 89  KMVREFLPDMLENNT--GHIVCISSIAA--LTAAVNVSAYFASKYGVT 132
              RE    M E N   GHI+ I+S++   +        Y A+K+ VT
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVT 168

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 32  ADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            DV    EI+ L      + G +D+L+NNAG     +     D     +++ NL    ++
Sbjct: 59  CDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRV 118

Query: 91  VREFLPD--MLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +E L    MLE  TG I+ I+S       V+ + Y ASK+GV
Sbjct: 119 TKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGV 161

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 28  VYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTD-HEIERIMDVNLM 85
              KAD+SD A +++L E +RK+    D+LINNAG +   S +   D  E+++  D+NL 
Sbjct: 52  TTVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLT 111

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASK 128
           S + +    L    +      +V +SS AA+        Y +SK
Sbjct: 112 SPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSK 155

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLA-----HTDHEI-----E 77
           +   DVS   E+     E + K G +D L+NNAGI     +L         +E+     +
Sbjct: 53  FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI-NIPRLLVDEKDPAGKYELNEAAFD 111

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           ++ ++N      M +     M++ + G IV +SS A L  +   S Y A+K
Sbjct: 112 KMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATK 162

Length = 266

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 59.5 bits (145), Expect = 3e-11
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 9/110 (8%)

Query: 22  TKTHVAVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAH--TDHEIER 78
           TKT  A     D S   +I +++ + +  +  + IL+NN GI  S         + E++ 
Sbjct: 53  TKTIAA-----DFSAGDDIYERIEKELEGLD-IGILVNNVGISHSIPEYFLETPEDELQD 106

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           I++VN+M+ +KM R  LP M++   G IV ISS A L     ++ Y ASK
Sbjct: 107 IINVNVMATLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASK 156

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 59.8 bits (145), Expect = 3e-11
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 11/112 (9%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHE-----IERIM 80
           A  +  D+SD+ ++K     ++ + G VD+L NNAG+  ++  +    HE      ++IM
Sbjct: 56  AKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRI----HEYPVDVFDKIM 111

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            V++     M +  LP M+E   G I+  SS +   A +  S Y A+K  V 
Sbjct: 112 AVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVI 162

Length = 272

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 11/106 (10%)

Query: 31  KADVSDKAEIKKLNENVR---KIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMS 86
           + DV+D  EI +  E V        +D+LINNAGI+ S    +  D E +  +  VN++ 
Sbjct: 53  ELDVTD--EIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLG 110

Query: 87  NIKMVREFLPDMLENNTGHIVCIS----SIAALTAAVNVSAYFASK 128
            + + + FLP +L+     I+ IS    SI   T+     +Y ASK
Sbjct: 111 PLLLTQAFLPLLLKGARAKIINISSRVGSIGDNTSG-GWYSYRASK 155

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 32  ADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           AD++++    + ++  + K G +DIL+NNAGI+A          E +++M++NL + I +
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            +  +P +++   G IV +SS+A   +   V  Y  SK
Sbjct: 122 TKLAVPHLIKTK-GEIVNVSSVAGGRSFPGVLYYCISK 158

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 29  YFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
            +K DVS +  ++K  + ++K  G +DILI NAGI      L +T  +  +++DVNL   
Sbjct: 62  AYKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGV 121

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVTENHPSIKC 140
               +       +   G ++  +S++          +AY ASK  V     S+  
Sbjct: 122 FNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAV 176

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 6e-11
 Identities = 25/100 (25%), Positives = 53/100 (53%)

Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           AD++ +A  + +    R++G +++LINNAG+   + +       IER++ +NL + +++ 
Sbjct: 60  ADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  LP +    +  +V + S          ++Y ASK+ +
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFAL 159

Length = 263

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 59.9 bits (145), Expect = 7e-11
 Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  K DV+D+  +K    +     G VDI++NNAGI  SS     T  E +  +D+   
Sbjct: 467 AVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILAT 526

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENH 135
               + RE    M E    G+IV I+S  A+ A  N SAY A+K    E H
Sbjct: 527 GYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK--AAEAH 575

Length = 676

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 58.8 bits (143), Expect = 9e-11
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 22/124 (17%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE---------- 75
           A+  KADV DK  +++  + + +  G  DILIN AG    +   A TD+E          
Sbjct: 61  ALAVKADVLDKESLEQARQQILEDFGPCDILINGAG---GNHPKATTDNEFHELIEPTKT 117

Query: 76  --------IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFAS 127
                    E + D+NL+  +   + F  DM+    G+I+ ISS+ A T    V AY A+
Sbjct: 118 FFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAA 177

Query: 128 KYGV 131
           K  +
Sbjct: 178 KAAI 181

Length = 278

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 9e-11
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 31  KADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            ADV D+A++++  +  V   G +D+LI NAG+   + V   T  E   ++D NL     
Sbjct: 60  AADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFY 119

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            ++  +P +     G+I+ ISS+A        +AY ASK+G+ 
Sbjct: 120 TIKAAVPALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLV 161

Length = 237

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 58.6 bits (142), Expect = 1e-10
 Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAG--------------IVASSSVLAH 71
           A+   ADV D+A +++   E V + G VDILIN AG                   +    
Sbjct: 56  AIALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDL 115

Query: 72  TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +   E + D+NL  +    + F  DMLE   G I+ ISS+ A +    V AY A+K  V
Sbjct: 116 DEEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAV 175

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 58.7 bits (142), Expect = 1e-10
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIER 78
           L  + H      ADV D A +    +  ++  G +DIL+NNAG+    S L  +D + + 
Sbjct: 49  LCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDF 108

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASK 128
            +D+N+     + +  LP+M+    G IV +SS+   + A    +AY  +K
Sbjct: 109 HIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK 159

Length = 263

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            DV D+A++++  +      G +D L+NNAG+     V   T  E   ++D NL      
Sbjct: 53  GDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYC 112

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +  P +L    G IV + S+A   A    +AY ASK+G+
Sbjct: 113 IHKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGL 153

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     D++D+  +      +    G +DIL+NN G      +    D  I  +++ +L+
Sbjct: 62  AEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLV 121

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           + I + R     M     G I+ I+SIA   A    + Y A+K G+T
Sbjct: 122 APILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLT 168

Length = 256

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           AV     V D  +I  +   +   G VDIL+NNAGI+   S    ++ + + +M V+L  
Sbjct: 65  AVANYDSVEDGEKI--VKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKG 122

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + K+ R   P M +   G I+  SS A L      + Y A+K G+
Sbjct: 123 SFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGL 167

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 30  FKADVSD----KAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            + DVS     KA + K+   +   G +D+L+NNAGI   ++    T  +   ++D NL 
Sbjct: 55  VEGDVSSFESCKAAVAKVEAEL---GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + +  +  M E   G I+ ISS+         + Y A+K G+
Sbjct: 112 SVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGM 157

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 57.4 bits (139), Expect = 3e-10
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)

Query: 32  ADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           ADVSD  + + + + V      + IL+NNAG     + + +T+ E   I + NL S  ++
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFEL 126

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            R   P + ++ +  IV I S++ LT   + + Y  +K
Sbjct: 127 SRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTK 164

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 6/108 (5%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVA--SSSVLAHTDHEI-ERIMDVNL 84
           +   DV+D+  +  L +      G VDI  NNAGI      S+L +T  +  +R+ DVNL
Sbjct: 55  FVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSIL-NTGLDAWQRVQDVNL 113

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISS-IAALTAAVNVSAYFASKYGV 131
            S     +  LP M+    G I+  +S +A + +A +  +Y ASK GV
Sbjct: 114 TSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGV 161

Length = 255

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 4e-10
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADV+D A + +L +      G +D+L+NNAG++   ++      + +R +  NL 
Sbjct: 57  AIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLR 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               ++RE    +     G I+ +S+            Y ASK  V
Sbjct: 117 GAFVVLREAARHL--GQGGRIINLSTSVIALPLPGYGPYAASKAAV 160

Length = 245

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A  F  D++D   I      V ++G +D+L++NAG+     V   T  E    ++VN+++
Sbjct: 49  ATPFPVDLTDPEAIA---AAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVA 105

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
             ++ R  LP  L    GH+V I+S A L A     +Y ASK+ 
Sbjct: 106 PAELTRLLLP-ALRAAHGHVVFINSGAGLRANPGWGSYAASKFA 148

Length = 227

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 4e-10
 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 13/105 (12%)

Query: 31  KADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTDHEIERI---MDVNLMS 86
           K D++D  +        +   + VD+L+NNAGI  + +V    D  +E +    + N+  
Sbjct: 57  KLDLTDAIDRA------QAAEWDVDVLLNNAGIGEAGAV---VDIPVELVRELFETNVFG 107

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +++ + F+  M+    G +V  SS+A L       AY ASK+ +
Sbjct: 108 PLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHAL 152

Length = 257

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A + + D++D A+ +  + + V K G +D L+NNAG V     L          ++ NL+
Sbjct: 57  AEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAG-VNDGVGLEAGREAFVASLERNLI 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               M    LP  L+ + G IV ISS  ALT     S Y A+K   
Sbjct: 116 HYYVMAHYCLP-HLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQ 160

Length = 258

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 56.1 bits (136), Expect = 7e-10
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGI-VASSSV-----LAHTDHEIERI 79
             +   DV+ + ++K      + K G +DI++N AGI VA+ +        H+    +R+
Sbjct: 49  CRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRV 108

Query: 80  MDVNLMSNIKMVREFLPDMLEN---NTGH---IVCISSIAALTAAVNVSAYFASKYGVT 132
           ++VNL+    ++R     M +N     G    I+  +S+AA    +  +AY ASK G+ 
Sbjct: 109 INVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIV 167

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 7e-10
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A+   ADV+D   ++   +    ++G +D  +NNA +         T  E  R+ +V 
Sbjct: 57  GEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVT 116

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +  +      L  M   + G I+ + S  A  +    SAY A+K+ +
Sbjct: 117 YLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAI 164

Length = 334

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 55.7 bits (134), Expect = 8e-10
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             +   DV+D+  +K +    + K+G +D+L+NNA   +   + +    E +RI+ VNL 
Sbjct: 49  LFFVHGDVADETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLT 108

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ R    ++++N  G I+ I+S  A  +  +  AY ASK G+
Sbjct: 109 GPYELSRYCRDELIKNK-GRIINIASTRAFQSEPDSEAYAASKGGL 153

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 20  LPTKTHVAVYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER 78
           L     V V    D++D A +   L     + G VD+L+ NAG   ++S L  T     R
Sbjct: 46  LGDARFVPV--ACDLTDAASLAAALANAAAERGPVDVLVANAGAARAAS-LHDTTPASWR 102

Query: 79  I-MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
               +NL +    V   L  ML+ + G +V I S+  + AA+   AY A+K G
Sbjct: 103 ADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM-AALGHPAYSAAKAG 154

Length = 257

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 55.0 bits (133), Expect = 2e-09
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 12/117 (10%)

Query: 33  DVSDKAEIKKLNENVR-KIGYVDI--LINNAGIVASSSVLAHTDHEIER-IMDVNLMSNI 88
           DV+   +IK+  + V+  +G   +  L+NNAGI+           +  R  M+VNL   +
Sbjct: 56  DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTV 115

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM 145
           ++ + FLP +L    G +V +SS+          AY ASK  V         FS  +
Sbjct: 116 EVTKAFLP-LLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVE-------AFSDSL 164

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           D+SD    +   E +  +G VD+L+NNA +      L  T    +R  DVN+ + I + +
Sbjct: 60  DLSDWDATE---EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Query: 93  EFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASK 128
                M+     G IV +SS A+  A  N + Y ++K
Sbjct: 117 IVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTK 153

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIG-YVDILINNAGIVASSSVLAHTDH--EIERIMDVN 83
                 DV D   ++ L E +      +DILINNAGI     +        + +  +D N
Sbjct: 52  IHTIVLDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTN 111

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L+  I++++ FLP + +     IV +SS  A         Y A+K  +
Sbjct: 112 LIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAAL 159

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 30  FKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
              DV+D A +++  +  + + G +D L+N AG++   +    +  + E+   VN+    
Sbjct: 45  TPLDVADAAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVF 104

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            +++   P M +  TG IV ++S AA    ++++AY ASK
Sbjct: 105 NLLQAVAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASK 144

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 25  HVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIE---RIM 80
            +A  F AD + +  +  L+  V    G VD+L+ NAGI  ++ +   TD ++    R +
Sbjct: 53  GMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFI---TDFQLGDFDRSL 109

Query: 81  DVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYG 130
            VNL+      REF   M+ +   G I+ I+S +    + + S Y A+K+G
Sbjct: 110 QVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160

Length = 259

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 53.6 bits (129), Expect = 5e-09
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVAS--SSVLAHTDHEIERIMDVNLM 85
           +   DV+ +A+++   +  V + G +DI+ NNAG++ +   S+L  +  E ER++DVN+ 
Sbjct: 55  FVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVY 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTEN 134
                 +     M+    G IV ++S+A +   +   AY ASK+   G+T +
Sbjct: 115 GAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRS 166

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 53.4 bits (128), Expect = 6e-09
 Identities = 28/108 (25%), Positives = 60/108 (55%), Gaps = 8/108 (7%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS- 86
           +  AD+  + +I  + ++ V  +G++DILINNAGI+    +L   + + + ++++N  + 
Sbjct: 59  FITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118

Query: 87  ---NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +  + ++F+    + N G I+ I+S+ +    + V +Y ASK  V
Sbjct: 119 FFLSQAVAKQFVK---QGNGGKIINIASMLSFQGGIRVPSYTASKSAV 163

Length = 251

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 53.3 bits (128), Expect = 7e-09
 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDVNL 84
           A+  + +V+ + +++ +    V + G + IL+NNAG        +  T+ + E    +NL
Sbjct: 50  AIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNL 109

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENH 135
            S  ++ +   P M +   G I+ ISS+++    V ++AY +SK  V  NH
Sbjct: 110 FSAFRLSQLCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAV--NH 158

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDV 82
             A+    D++D+ +   L     +  G VD L+NNA  V S   LA  D      ++++
Sbjct: 54  RRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIEL 113

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           N++  +++ + F P + E+  G IV I+S+    +     AY  +K
Sbjct: 114 NVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAK 158

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 33  DVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D+A IK  ++  + + G +D+L+NNAG  +  ++      E  R  +VNL    ++ 
Sbjct: 54  DVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLT 113

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  LP M    +G I+ ISS+         + Y A+K+ +
Sbjct: 114 QLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFAL 153

Length = 273

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 9e-09
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV+ +AD+SD  + +++        G +D L+N AG+    ++L  +    +R   VN+ 
Sbjct: 58  AVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVR 117

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV---TEN 134
           +   +++E +  M      G IV I S++A      ++AY ASK  +   T N
Sbjct: 118 APFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRN 170

Length = 260

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 47  VRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGH 105
           V   G +D+LINN G    +       + +IE  +  +L   +   R  LP ML    G 
Sbjct: 79  VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGA 138

Query: 106 IVCISSIAALTAAVNVSAYFASKYGV 131
           IV +SSIA  T  +N   Y A+K GV
Sbjct: 139 IVNVSSIA--TRGINRVPYSAAKGGV 162

Length = 260

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTD-HEIERIMDVNL 84
           A     DV+++A++  + + V    G +D L+NNAGIVA S  LA  D   + R+ D N+
Sbjct: 54  ACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113

Query: 85  MSNIKMVREFLPDMLENNTGH---IVCISSIAA 114
           +      RE    +  +  G    IV +SSIA+
Sbjct: 114 LGAYLCAREAARRLSTDRGGRGGAIVNVSSIAS 146

Length = 248

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 9/115 (7%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS--SVLAHTDHEIERIMDVN 83
            ++F ADV+D +  + + +  +   G +D L+NNAG+       +L  T    +R++ +N
Sbjct: 54  VIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAIN 113

Query: 84  LMSNIKMVREFLPDMLENNTGH------IVCISSIAALTAAVNVSAYFASKYGVT 132
           L     + +     ML            IV +SS+ A+  + N   Y  SK G++
Sbjct: 114 LRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLS 168

Length = 256

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 16/118 (13%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER------- 78
              + A+V+D+ +++     + +  G ++ LINNAGI+    ++   D ++         
Sbjct: 56  VRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF 115

Query: 79  --IMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNV--SAYFASKYGV 131
             ++DVNL       RE    M+E+ + G I+ ISSIA    A N+  + Y ASK GV
Sbjct: 116 QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA---RAGNMGQTNYSASKAGV 170

Length = 253

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 17/111 (15%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVL--------AHTDHEIE 77
           A+  KA+V D  +IK++   +  + G +D+ +NNA    +S VL        +H D    
Sbjct: 56  ALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNA----ASGVLRPAMELEESHWDW--- 108

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
             M++N  + +   +E    M +   G I+ +SS+ ++    N +    SK
Sbjct: 109 -TMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSK 158

Length = 250

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
           A     DV+D+A     L +      G +D+L NNAGI+             +R++D+N+
Sbjct: 50  AWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINV 109

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV---TE 133
              +      LP +       ++  SS +A+     ++ Y A+K+ V   TE
Sbjct: 110 KGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTE 161

Length = 260

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           A+   ADV+D+A++ +L E V R++G +D L+NNAGI+ +   L   D   + RI   N+
Sbjct: 54  ALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNV 113

Query: 85  MSNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSA-YFASK 128
           + +    RE +  M   + G    IV +SS+AA   +      Y ASK
Sbjct: 114 VGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161

Length = 248

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 51.7 bits (124), Expect = 3e-08
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  F AD +++  +  L++ V +I   VD+L+ +AGI  S+ +      + +R + VNL+
Sbjct: 54  AYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLV 113

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYG 130
                 REF   M+ +   G I+ I+S +    + + S Y A+K+G
Sbjct: 114 GYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 159

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAG-----IVASSSVLAHTDHEIERIMDVNLM 85
           ADV D  ++  L +  V + G +D+L+NNAG     + A +S   H     E+I+++NL+
Sbjct: 54  ADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFH-----EKIVELNLL 108

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           + + + +     M +    G IV I S++    +   +AY A+K G+
Sbjct: 109 APLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGL 155

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 4e-08
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 2/109 (1%)

Query: 25  HVAVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
             A+    DV+ +  I + +   V + G +DIL NNA +   + +L  +    +R+  VN
Sbjct: 52  PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVN 111

Query: 84  LMSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGV 131
           +     +++     M+E   G  I+ ++S A       VS Y A+K  V
Sbjct: 112 VKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAV 160

Length = 257

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 51.1 bits (122), Expect = 4e-08
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  F  D++D+  +        + +G VD+L+NNAG               ER++ +NL 
Sbjct: 54  AQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + M    LP M+E   G IV I+S AA   +   + Y A K G+
Sbjct: 114 GALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 50.9 bits (122), Expect = 5e-08
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 31  KADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           + DV+D A + +L E    + G +D+LINNAG  A   +L      + R  + N+ + + 
Sbjct: 50  QLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVG 109

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + R   P +L  + G +V I S++ +       AY ASK  V
Sbjct: 110 VTRALFP-LLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAV 150

Length = 274

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 50.6 bits (121), Expect = 5e-08
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTD-HEIERIMDVNL 84
             +   DV+ + +IK L +  V + G +D L+NNAG          T   E   ++++NL
Sbjct: 61  CKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNL 120

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           +S     +  LP  L  + G+I+ +SS+         + Y A+K  +T
Sbjct: 121 ISYFLASKYALP-HLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAIT 167

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 50.6 bits (121), Expect = 6e-08
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVAS--SSVLAHTDHEIERIMDVN 83
             +F  DV+ + ++ + ++  V K G +DI++NNAG+       +      E E++ DVN
Sbjct: 68  VCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVN 127

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +      ++     M+    G IV + S+A+    +   AY  SK+ V
Sbjct: 128 VKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV 175

Length = 280

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 50.7 bits (121), Expect = 6e-08
 Identities = 23/107 (21%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV+++  +    + V  + G VDIL++NAGI   + +  ++  + +++  +++ 
Sbjct: 58  AIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD 117

Query: 86  SNIKMVREFLPDML-ENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +  L  M  ++  G ++ + S+ +  A+   SAY  +K+G+
Sbjct: 118 GAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGL 164

Length = 262

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 7e-08
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERI-MDVNLMSNIKM 90
           DV D+A++      V  + G VD+L+NNAG     S  A T  +  R  +++   S I  
Sbjct: 67  DVLDEADVAAFAAAVEARFGGVDMLVNNAG-QGRVSTFADTTDDAWRDELELKYFSVINP 125

Query: 91  VREFLPDMLENNTGHIVCISSIAAL 115
            R FLP +  +    IVC++S+ AL
Sbjct: 126 TRAFLPLLRASAAASIVCVNSLLAL 150

Length = 265

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 10/88 (11%)

Query: 33  DVSDKAEIKK----LNENVRKIGYVDILINNAGIVASSSVLAHTDH--EIERIMDVNLMS 86
           DV ++A I++    L    R I   D+L+NNAG+ A     AH     + E ++D N   
Sbjct: 54  DVRNRAAIEEMLASLPAEWRNI---DVLVNNAGL-ALGLEPAHKASVEDWETMIDTNNKG 109

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAA 114
            + M R  LP M+E N GHI+ I S A 
Sbjct: 110 LVYMTRAVLPGMVERNHGHIINIGSTAG 137

Length = 248

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 8/106 (7%)

Query: 31  KADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            AD+     I  L E  V + G++DIL+NNAG++     +  ++ + + +M++N+ S   
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122

Query: 90  M----VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M     + F+    + N G I+ I+S+ +    + V +Y ASK GV
Sbjct: 123 MSQAAAKHFIA---QGNGGKIINIASMLSFQGGIRVPSYTASKSGV 165

Length = 253

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 33  DVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAH-TDHEIERIMDVNLMSNIKM 90
           D++      ++ E++ +  G +DI+++NAGI    + LA+  +   + ++ VNL++ +++
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKT-LANMDEARWDSVLAVNLLAPLRI 322

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               L      + G IV +SSI+ +      + Y ASK GV
Sbjct: 323 TEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGV 363

Length = 450

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDVNL 84
           AV    DV D+A  K L    V + G +DI  NNAG +     V   +       +  NL
Sbjct: 57  AVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNL 116

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYG 130
            S     +  +P ML    G ++  S+    TA    ++AY ASK G
Sbjct: 117 TSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAG 163

Length = 254

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV F  DV+D   +K  + +    +G +++L++ AG      +   +  + E  + ++L+
Sbjct: 61  AVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++    LP M+E   G ++ + S  AL    ++ AY A+K G+
Sbjct: 121 GANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGL 166

Length = 274

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  +AD+SD A    L     R  G  D+L+NNA     + +   ++     +  +NL 
Sbjct: 52  AVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLK 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
           +   +++ F   +  +  G I+ I             AY  SK  
Sbjct: 112 APYLLIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAA 156

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           ++ D++D+A IK L E   K+G+ D +++ AG    + +   TD + +R ++  L+  I 
Sbjct: 35  YQVDITDEASIKALFE---KVGHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQIN 91

Query: 90  MVREFLPDMLENNTGHIVCISSIAA 114
           +VR  LP +  N+ G I   S I A
Sbjct: 92  LVRHGLPYL--NDGGSITLTSGILA 114

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 13/116 (11%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAHTDHEIERIMDVN 83
           A+YF+AD+ + ++ + L +   +  G +D L+NNAGI       +L  T+   +R++ +N
Sbjct: 53  AIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAIN 112

Query: 84  LMSNI--------KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L            +MV +  PD  +     I+ ++SI A   + N   Y  SK G+
Sbjct: 113 LRGPFFLTQAVARRMVEQ--PDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGL 166

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGI---VASSSVLAHTDHE 75
           L     +A   + D++ K  IK+L E+   K G +DILINNA     V  S        +
Sbjct: 49  LYKNRVIA--LELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQ 106

Query: 76  IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA 118
              +++VNL       + F+    +   G I+ I+SI  + A 
Sbjct: 107 WNEVLNVNLGGAFLCSQAFIKLFKKQGKGSIINIASIYGVIAP 149

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 47.2 bits (113), Expect = 8e-07
 Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHE--- 75
           LP    V+VY  ADV D   +     + +   G  D++I NAGI    SV   T+     
Sbjct: 46  LPKAARVSVY-AADVRDADALAAAAADFIAAHGLPDVVIANAGI----SVGTLTEEREDL 100

Query: 76  --IERIMDVNLMSNIKMVREFLP---DMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
                +MD N      MV  F P    M     G +V I+S+A +       AY ASK  
Sbjct: 101 AVFREVMDTNYFG---MVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAA 157

Query: 131 V 131
            
Sbjct: 158 A 158

Length = 257

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 32  ADVSDKAEIKKLNENVRKIG-YVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           AD+S +  I+ L   V +    +D+L+NNAG    + + A  +   +++MD+N+ S   +
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFL 120

Query: 91  VREFLPDMLEN----NTGHIVCISSIAALTA-AVNVSAYFASKYGV 131
            +  LP +       N   ++ I SIA +    +   +Y ASK  V
Sbjct: 121 TQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAV 166

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 46.4 bits (110), Expect = 1e-06
 Identities = 21/78 (26%), Positives = 38/78 (48%)

Query: 54  DILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA 113
           D++++NA I+    ++  T   IER +  N++   +++      M     G  + ISS+A
Sbjct: 33  DVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 114 ALTAAVNVSAYFASKYGV 131
            L  A  +  Y ASK  +
Sbjct: 93  GLFGAPGLGGYAASKAAL 110

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A +   D++D A I++ +   V + G VDIL+N A        LA +  +    +DVNL+
Sbjct: 54  ARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG-LASSRADWLAALDVNLV 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           S   + +   P +     G IV  +SI+A  A      Y ASK
Sbjct: 113 SAAMLAQAAHPHL-ARGGGAIVNFTSISAKFAQTGRWLYPASK 154

Length = 261

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 18/115 (15%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGI---VASSSVLAHTDHEI-----E 77
           A+  K DV+ ++++  L +  V++ G +D++INNAGI   V S        HE+      
Sbjct: 59  AIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPS--------HEMSLEDWN 110

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++++ NL       RE +   +E++  G+I+ +SS+           Y ASK GV
Sbjct: 111 KVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGV 165

Length = 261

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 25/125 (20%)

Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV----LAHTDHEIERIMDVNLM 85
           F  D++D  +       + +I  VD ++NN GI     +    LA     ++ + D+N+ 
Sbjct: 46  FACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAA----LQDVYDLNVR 101

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK----------------Y 129
           + +++ + FL  M     G IV I S A    A++ ++Y A+K                Y
Sbjct: 102 AAVQVTQAFLEGMKLREQGRIVNICSRAIF-GALDRTSYSAAKSALVGCTRTWALELAEY 160

Query: 130 GVTEN 134
           G+T N
Sbjct: 161 GITVN 165

Length = 234

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD--HEIERIMDVNLMS 86
              DV+D+   ++L E ++K    +++LINNAGI  +  +    D   + E+ +  NL++
Sbjct: 55  EVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLA 114

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            I++    LP +L      I+ +SS  A     +   Y A+K  +
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAI 159

Length = 245

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 22  TKTHVAVYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTDHEIERIM 80
           T        + D+S  A +++  E        +DILINNAGI+A    L  T    E   
Sbjct: 49  TGNAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRL--TKDGFELQF 106

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA 117
            VN + +  +    LP +  +    IV +SSIA    
Sbjct: 107 AVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAG 143

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 31  KADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           + +V D    K   + V+ ++G +D+L+NNAGI         T  +   ++D NL S   
Sbjct: 59  EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFN 118

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + ++ +  M+E   G I+ ISS+         + Y  +K G+
Sbjct: 119 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 160

Length = 246

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 47  VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNLMSNIKMVREFLPDMLENNTGH 105
           V   G VDIL++NA +      +  +  E+ ++I+DVN+ +   M +  +P+M +   G 
Sbjct: 82  VNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVVPEMEKRGGGS 141

Query: 106 IVCISSIAALTAAVNVSAYFASK---YGVTEN 134
           +V +SS+AA      +  Y  SK    G+T+N
Sbjct: 142 VVIVSSVAAFHPFPGLGPYNVSKTALLGLTKN 173

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-----IERIMDVNLMS 86
           DV   A+ ++     V + G +D  I NAGI   S+ L     E      + +  +N+  
Sbjct: 58  DVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            I   +  LP +     G ++   S A          Y ASK+ V 
Sbjct: 118 YILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVV 162

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK----IGYVDILINNAGIVASSSVLAHTDHEIERIMDV 82
           A+   ADV+ KA+   L   V +    +G + + +N AGI  ++      + + + +MD+
Sbjct: 60  AIQIAADVTSKAD---LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDI 116

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA--AVNVSAYFASKYGV 131
           NL       +     MLEN  G IV I+S++ +     +  + Y ASK GV
Sbjct: 117 NLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGV 167

Length = 254

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 27  AVYFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIVASSSV--LAHTDHE-IERIMDV 82
           A+  + DVSD    K + +  V   G +D L+NNA I     +  L     +  ++ M V
Sbjct: 57  AIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSV 116

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAA 114
           NL   +   R     M +   G IV  SS AA
Sbjct: 117 NLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA 148

Length = 250

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 45.1 bits (107), Expect = 5e-06
 Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 8/110 (7%)

Query: 27  AVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  KADVSD+ ++   + + V   G +++++NNAG+  ++ +   T+ + +++ ++N+ 
Sbjct: 53  AIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVG 112

Query: 86  SNI----KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             I         F       + G I+  +S A +     ++ Y ++K+ V
Sbjct: 113 GVIWGIQAAQEAFKK---LGHGGKIINATSQAGVVGNPELAVYSSTKFAV 159

Length = 256

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 25/110 (22%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAG-----IVASSSVLAHTDHEIERIMD 81
           +      S   + K+ +    R  G VD LI  AG        S S + + D        
Sbjct: 43  IIVLDSDSFTEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMW----K 98

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            NL ++          +L    G +V   + AAL     +  Y A+K  V
Sbjct: 99  QNLWTSFIASHLATKHLLSG--GLLVLTGAKAALEPTPGMIGYGAAKAAV 146

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
            D+S     ++L       G +DIL+NNAG +    +    D       ++ +   I + 
Sbjct: 64  LDLSSPEAREQLAAEA---GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLT 120

Query: 92  REFLPDMLENNTGHIV 107
           R   P M    +G IV
Sbjct: 121 RLAYPRMKARGSGVIV 136

Length = 259

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 23  KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMD 81
           K H A +   +V+ K E++   E++ K IG +D+LINNAGI          + E   ++ 
Sbjct: 59  KAHAAPF---NVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIA 115

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           VN  +   + +     M++   G I+ I S+ +      ++ Y ASK  V 
Sbjct: 116 VNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVK 166

Length = 254

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 33  DVSDKAEIKK-LNENVRKIG-YVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+D+A     L +     G  +D L NNAG+              +R++D+N+   +  
Sbjct: 55  DVTDRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNG 114

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTE 133
               LP +       ++  +S +A+    +++ Y A+K+   G+TE
Sbjct: 115 AYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTE 160

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 45  ENVRKI--------GYVDILINNAGIVASSSVLA-HTDHEIERIMDVNLMSNIKMVREFL 95
           EN +++          +D +++NAG++     L+       + +  VN+ +   + +  L
Sbjct: 69  ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALL 128

Query: 96  PDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           P +L+++ G +V  SS        N  AY  SK+  
Sbjct: 129 PLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFAT 164

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 23/121 (19%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           AV    D+S +A   +L      +G +DI++NNAGI     +   +D E + ++ V+L  
Sbjct: 64  AVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123

Query: 87  NIKMVREFLPDMLENNT---------------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  + R        N                 G IV  SS A L   V  + Y A+K G+
Sbjct: 124 HFLLTR--------NAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGI 175

Query: 132 T 132
           T
Sbjct: 176 T 176

Length = 306

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAH----TDH 74
           L  +    V    DV+   +I +L E V++  G +D L+++  +             +  
Sbjct: 40  LAKELPADVIP-LDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSRE 98

Query: 75  EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA 114
              + +D++  S I + +   P M  N  G IV +S IAA
Sbjct: 99  GFLKALDISAYSFISLAKAAKPLM--NEGGSIVALSYIAA 136

Length = 239

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 16/92 (17%)

Query: 29  YFKADVSDKAEIKKLNENV--RKIGYVDILINNAGI---VASSSVLAHTDHEIERIMDVN 83
              AD+S          +V  R  G +D L+N AG+     +  VL            VN
Sbjct: 35  DVIADLSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK-----------VN 83

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAAL 115
                 ++   LP + + +    V +SSIA  
Sbjct: 84  YFGLRALMEALLPRLRKGHGPAAVVVSSIAGA 115

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV+D+A I + +   V + G +DIL+NNA +   + ++  T    +R+  +N+ 
Sbjct: 51  ACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVS 110

Query: 86  SNIKMVREFLPDML-ENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + M++     M+ +   G I+ ++S A       V  Y A+K  V
Sbjct: 111 GTLFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAV 157

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH-TDHE-IERIMDVN 83
           V V F  D+ +   +K++ E +  +  V +LINN G+    +   H  D E ++ ++ VN
Sbjct: 109 VVVDFSGDIDEG--VKRIKETIEGLD-VGVLINNVGVSYPYARFFHEVDEELLKNLIKVN 165

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAAL 115
           +    K+ +  LP ML+   G I+ I S AA+
Sbjct: 166 VEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197

Length = 320

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-----KIGY--VDILINNAGIVASSSVLAHTDHEIERI 79
           A   +AD++    +KKL E ++     ++G   +DIL+NNAGI    ++   T+   + I
Sbjct: 58  AFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI 117

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           M VN+ +   ++++ LP  L    G ++ ISS           AY  SK
Sbjct: 118 MAVNIKAPFFLIQQTLP--LLRAEGRVINISSAEVRLGFTGSIAYGLSK 164

Length = 254

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
           A   +AD+SD+ ++  +   + +    +  L+NNAGI+ +   + + T   I R++  N+
Sbjct: 53  AFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV 112

Query: 85  MSNIKMVREFLPDMLENNTGH---IVCISSIAA-LTAAVNVSAYFASKYGV 131
                  RE +  M   + G    IV +SS A+ L A      Y ASK  +
Sbjct: 113 TGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAI 163

Length = 247

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           ADV+ + E+  L + +   G +D+L+  AG +    +         RI+D NL     ++
Sbjct: 49  ADVAAELEVWALAQEL---GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALVL 105

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  L  +       +V + +   L     +SAY A+K  +
Sbjct: 106 KHALALLAAG--ARLVFLGAYPELVMLPGLSAYAAAKAAL 143

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + D++ + E+  L +  + K+G VDIL+NNAG             +  R  ++N+ 
Sbjct: 62  AFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMA-DFRRAYELNVF 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENH 135
           S   + +   P+M +N  G I+ I+S+AA    +N+++Y +SK     +H
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA--SH 168

Length = 255

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +AD  D A  K L + + +  G +D +  NAG+   + +    +   +R  + N+ 
Sbjct: 54  ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVK 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               +++  LP  L  N   IV   SI A     N S Y ASK  +
Sbjct: 114 GPYFLIQALLP--LLANPASIVLNGSINAHIGMPNSSVYAASKAAL 157

Length = 249

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
            A  +D A+   + + VRK G +DIL+ NAGI      L     +I+R+  +N+ +    
Sbjct: 54  TAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHA 113

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASK 128
             E    M     G I+ I S+      V  ++AY ASK
Sbjct: 114 SVEAARQM--PEGGRIIIIGSVNGDRMPVAGMAAYAASK 150

Length = 237

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 22  TKTHV------AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGI-VASSSVLAHTD 73
           TK  V       +    DVSD+A  K  + E VR++G +DIL+NNA       S+   T 
Sbjct: 87  TKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITA 146

Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            ++++    N+ S   M +  LP +       I+   SI        +  Y A+K  +
Sbjct: 147 EQLDKTFKTNIYSYFHMTKAALPHL--KQGSAIINTGSITGYEGNETLIDYSATKGAI 202

Length = 290

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 45  ENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT 103
           E V++ G +DIL+NNA       S+   T  ++E+    N+ S   + +  LP + + ++
Sbjct: 98  EVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFYLTKAALPHLKKGSS 157

Query: 104 GHIVCISSIAALTAAVNVSAYFASK 128
             I+  +S+ A   + ++  Y A+K
Sbjct: 158 --IINTTSVTAYKGSPHLLDYAATK 180

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV F+AD++  A ++KL ++     G  DI IN  G V    ++  ++ E + +  VN  
Sbjct: 63  AVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSK 122

Query: 86  SNIKMVREFLPDMLENNTGHIVCI--SSIAALTAAVNVSAYFASKYGV 131
           S    ++E    +  N+ G IV +  S + A T     SAY  SK  V
Sbjct: 123 SAFFFIKEAGRHL--NDNGKIVTLVTSLLGAFTPF--YSAYAGSKAPV 166

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D   ++   +    +IG +DIL+NNAG+   + +        ER++  N+ S   + 
Sbjct: 67  DVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVG 126

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +     M+    G I+ I+S+ +  A   ++ Y A+K  V
Sbjct: 127 QAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAV 166

Length = 255

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
            D+S  AE +KL + V  IG  D +I+NAGI++  +     D  I  ++ VN+++
Sbjct: 60  GDLSSLAETRKLADQVNAIGRFDAVIHNAGILSGPNRKT-PDTGIPAMVAVNVLA 113

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 42/170 (24%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVN-- 83
           A+  +ADV D+ +++ + E  +   G VD ++NNA I            +     D    
Sbjct: 49  AIAIQADVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQ 108

Query: 84  LMSNIK----MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK----------- 128
           L   +K    +++  LPD  E  +G ++ I +       V    Y  +K           
Sbjct: 109 LEGAVKGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMA 168

Query: 129 -----YGVTENHPSIKCFSGYMLWGTTV--------------TTPLRSVT 159
                YG+T N       SG +L  T                TTPL  VT
Sbjct: 169 KELGPYGITVN-----MVSGGLLKVTDASAATPKEVFDAIAQTTPLGKVT 213

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D   IK    +   + G +DIL+NN+G+  +  ++  T  + + + D N      + 
Sbjct: 66  DVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVA 125

Query: 92  REFLPDML-----ENNT---GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +E    M+       NT   G I+ I+S+A L     +  Y  SK  V
Sbjct: 126 QEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAV 173

Length = 258

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 14/101 (13%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
                 + DVS +  +K L    + +G V  L++ AG+  S +         E I+ V+L
Sbjct: 49  FDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPSQA-------SPEAILKVDL 101

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIA-----ALTAAVN 120
                ++ EF   +     G  V I+S +     ALTA   
Sbjct: 102 YGTALVLEEFGKVIAPGGAG--VVIASQSGHRLPALTAEQE 140

Length = 275

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-----IERIMDVNLMS 86
           DV+  A+ ++  ++ V   G +D  + NAGI   ++ L     E      + I +VN+  
Sbjct: 60  DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +   +  LP +  +  G ++   S ++         Y ASK+ V 
Sbjct: 120 YLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVV 164

Length = 263

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 33  DVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           D+ D+ +++  + + V K G +DIL+NNA  ++ +  L       + +M VN        
Sbjct: 67  DIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYLCS 126

Query: 92  REFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGVT 132
           +  LP + ++   HI+ +S    L      N +AY  +KYG++
Sbjct: 127 KACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMS 169

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 27  AVYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V    DVS   ++   L++   ++G +DI + NAGI+  + +L     E +R+ + N+ 
Sbjct: 60  VVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVT 119

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAA--LTAAVNVSAYFASKYGVTE 133
                 +     M++    G I+  +S++   +     VS Y ASK  V  
Sbjct: 120 GVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIH 170

Length = 253

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 54  DILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA 113
           DILINNAGI   + +   T+   +R++ VN  +   ++++ L  + +N+   I+ ISS A
Sbjct: 90  DILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNS--RIINISSAA 147

Query: 114 ALTAAVNVSAYFASK 128
              +  +  AY  +K
Sbjct: 148 TRISLPDFIAYSMTK 162

Length = 252

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 19/135 (14%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMD--V 82
             +Y  ADV+D A +++L E VR+  G +D +I+ AG++  + +   T  + E ++   V
Sbjct: 261 RVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKV 320

Query: 83  NLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAY-----FASKYG--VTEN 134
           + + N       L   L +      V  SS++A       + Y     F   +   + + 
Sbjct: 321 DGLLN-------LAQALADEPLDFFVLFSSVSAFFGGAGQADYAAANAFLDAFAAYLRQR 373

Query: 135 HPSIKCFS-GYMLWG 148
            P  +  S  +  W 
Sbjct: 374 GPQGRVLSINWPAWR 388

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAG---IVASSSVLAHTDHEIERIMDVNLMSN 87
            DV D   ++   +E +++ G +DILINNA    +  + S+   + +  + ++D++L   
Sbjct: 60  CDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESL---SPNGFKTVIDIDLNGT 116

Query: 88  IKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               +     ++E  + G I+ IS+  A T +       A+K GV
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGV 161

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 36.6 bits (85), Expect = 0.004
 Identities = 23/76 (30%), Positives = 34/76 (44%)

Query: 56  LINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL 115
           L NNAG      +   +  ++E+    N     ++    LP ML +  G IV  SS+  L
Sbjct: 78  LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGL 137

Query: 116 TAAVNVSAYFASKYGV 131
            +     AY ASKY +
Sbjct: 138 ISTPGRGAYAASKYAL 153

Length = 256

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D  ++ ++  E   ++G +D +I NAGI   + +        +   + N ++ +   
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQC 120

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVT 132
              +    E  +GH+V ISS++A+       +AY ASK GV 
Sbjct: 121 EAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVA 162

Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.98
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.97
KOG1205|consensus	282		99.97
KOG1201|consensus	300		99.95
PRK08339	263	short chain dehydrogenase; Provisional	99.95
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.95
PRK06398	258	aldose dehydrogenase; Validated	99.95
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.95
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
KOG1200|consensus	256		99.94
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.94
PRK07063	260	short chain dehydrogenase; Provisional	99.94
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK06139	330	short chain dehydrogenase; Provisional	99.94
PRK05876	275	short chain dehydrogenase; Provisional	99.94
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.93
PRK07062	265	short chain dehydrogenase; Provisional	99.93
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK08589	272	short chain dehydrogenase; Validated	99.93
PRK06114	254	short chain dehydrogenase; Provisional	99.93
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07791	286	short chain dehydrogenase; Provisional	99.93
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PRK07478	254	short chain dehydrogenase; Provisional	99.93
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.93
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.93
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.93
PRK06179	270	short chain dehydrogenase; Provisional	99.93
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK05867	253	short chain dehydrogenase; Provisional	99.93
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.93
PRK08303	305	short chain dehydrogenase; Provisional	99.93
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.92
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.92
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.92
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.92
PRK08862	227	short chain dehydrogenase; Provisional	99.92
PRK05872	296	short chain dehydrogenase; Provisional	99.92
PRK05993	277	short chain dehydrogenase; Provisional	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK08265	261	short chain dehydrogenase; Provisional	99.92
KOG1610|consensus	322		99.92
PRK08278	273	short chain dehydrogenase; Provisional	99.92
PRK05855	582	short chain dehydrogenase; Validated	99.92
PRK06182	273	short chain dehydrogenase; Validated	99.92
PRK07825	273	short chain dehydrogenase; Provisional	99.92
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.92
PRK07109	334	short chain dehydrogenase; Provisional	99.92
KOG0725|consensus	270		99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK07856	252	short chain dehydrogenase; Provisional	99.92
PRK07985	294	oxidoreductase; Provisional	99.92
PRK07831	262	short chain dehydrogenase; Provisional	99.92
PRK06523	260	short chain dehydrogenase; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK09242	257	tropinone reductase; Provisional	99.92
PRK12747	252	short chain dehydrogenase; Provisional	99.92
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.92
PRK06172	253	short chain dehydrogenase; Provisional	99.92
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.91
PRK08643	256	acetoin reductase; Validated	99.91
PRK05650	270	short chain dehydrogenase; Provisional	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.91
PRK06483	236	dihydromonapterin reductase; Provisional	99.91
PRK12743	256	oxidoreductase; Provisional	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK07677	252	short chain dehydrogenase; Provisional	99.91
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK05599	246	hypothetical protein; Provisional	99.91
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.91
PRK07067	257	sorbitol dehydrogenase; Provisional	99.91
PRK06128	300	oxidoreductase; Provisional	99.91
PRK07035	252	short chain dehydrogenase; Provisional	99.91
PRK06484	520	short chain dehydrogenase; Validated	99.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.91
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.91
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.91
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.91
PRK06194	287	hypothetical protein; Provisional	99.91
KOG4169|consensus	261		99.91
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.91
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK05717	255	oxidoreductase; Validated	99.91
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.9
PRK08267	260	short chain dehydrogenase; Provisional	99.9
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.9
PRK06841	255	short chain dehydrogenase; Provisional	99.9
PRK08226	263	short chain dehydrogenase; Provisional	99.9
PRK06125	259	short chain dehydrogenase; Provisional	99.9
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.9
PRK06484	520	short chain dehydrogenase; Validated	99.9
PRK07454	241	short chain dehydrogenase; Provisional	99.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.9
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.9
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.9
PRK05866	293	short chain dehydrogenase; Provisional	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
KOG1209|consensus	289		99.9
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.9
PRK07069	251	short chain dehydrogenase; Validated	99.9
PRK07576	264	short chain dehydrogenase; Provisional	99.9
PLN02780	320	ketoreductase/ oxidoreductase	99.9
KOG1210|consensus	331		99.89
PRK06138	252	short chain dehydrogenase; Provisional	99.89
PRK05693	274	short chain dehydrogenase; Provisional	99.89
PRK09134	258	short chain dehydrogenase; Provisional	99.89
PRK07814	263	short chain dehydrogenase; Provisional	99.89
PLN00015	308	protochlorophyllide reductase	99.89
PRK07832	272	short chain dehydrogenase; Provisional	99.89
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08628	258	short chain dehydrogenase; Provisional	99.89
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07890	258	short chain dehydrogenase; Provisional	99.89
PRK12939	250	short chain dehydrogenase; Provisional	99.89
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.89
PRK12937	245	short chain dehydrogenase; Provisional	99.89
PRK07904	253	short chain dehydrogenase; Provisional	99.89
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.89
PRK06914	280	short chain dehydrogenase; Provisional	99.89
PRK06500	249	short chain dehydrogenase; Provisional	99.89
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.89
PRK07578	199	short chain dehydrogenase; Provisional	99.89
PRK07775	274	short chain dehydrogenase; Provisional	99.89
PRK09072	263	short chain dehydrogenase; Provisional	99.89
PRK06123	248	short chain dehydrogenase; Provisional	99.89
PRK08251	248	short chain dehydrogenase; Provisional	99.89
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.88
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK10538	248	malonic semialdehyde reductase; Provisional	99.88
PRK06701	290	short chain dehydrogenase; Provisional	99.88
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.88
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.88
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.88
PRK05854	313	short chain dehydrogenase; Provisional	99.88
KOG1207|consensus	245		99.88
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK07577	234	short chain dehydrogenase; Provisional	99.88
PRK06198	260	short chain dehydrogenase; Provisional	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.87
PRK08703	239	short chain dehydrogenase; Provisional	99.87
PRK05875	276	short chain dehydrogenase; Provisional	99.87
PRK06197	306	short chain dehydrogenase; Provisional	99.87
PRK06949	258	short chain dehydrogenase; Provisional	99.87
PRK06057	255	short chain dehydrogenase; Provisional	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
PRK06940	275	short chain dehydrogenase; Provisional	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
KOG1611|consensus	249		99.87
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK07102	243	short chain dehydrogenase; Provisional	99.87
PRK07201	657	short chain dehydrogenase; Provisional	99.87
PRK07023	243	short chain dehydrogenase; Provisional	99.87
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.87
PRK12746	254	short chain dehydrogenase; Provisional	99.87
PRK06196	315	oxidoreductase; Provisional	99.86
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.86
PRK05884	223	short chain dehydrogenase; Provisional	99.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
COG1028	251	FabG Dehydrogenases with different specificities (	99.86
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.86
PRK06181	263	short chain dehydrogenase; Provisional	99.86
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.86
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06924	251	short chain dehydrogenase; Provisional	99.86
PRK06101	240	short chain dehydrogenase; Provisional	99.85
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.85
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.85
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK07074	257	short chain dehydrogenase; Provisional	99.85
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.85
PRK12742	237	oxidoreductase; Provisional	99.84
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK08264	238	short chain dehydrogenase; Validated	99.84
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.84
PRK07041	230	short chain dehydrogenase; Provisional	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK09291	257	short chain dehydrogenase; Provisional	99.83
PRK12828	239	short chain dehydrogenase; Provisional	99.83
PRK07060	245	short chain dehydrogenase; Provisional	99.83
PRK12829	264	short chain dehydrogenase; Provisional	99.83
PRK09135	249	pteridine reductase; Provisional	99.83
PRK08017	256	oxidoreductase; Provisional	99.82
KOG1208|consensus	314		99.82
PRK08177	225	short chain dehydrogenase; Provisional	99.82
KOG1014|consensus	312		99.82
KOG1204|consensus	253		99.8
KOG1199|consensus	260		99.77
PRK12367	245	short chain dehydrogenase; Provisional	99.76
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK06953	222	short chain dehydrogenase; Provisional	99.75
PRK07806	248	short chain dehydrogenase; Provisional	99.75
PRK08219	227	short chain dehydrogenase; Provisional	99.74
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.73
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.7
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.69
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.63
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.63
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.43
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.4
KOG1478|consensus	341		99.37
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.33
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.32
PLN02653	340	GDP-mannose 4,6-dehydratase	99.31
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.31
PLN02572	442	UDP-sulfoquinovose synthase	99.29
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.28
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.26
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.23
PLN00198	338	anthocyanidin reductase; Provisional	99.18
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.15
PLN02240	352	UDP-glucose 4-epimerase	99.15
PRK06720	169	hypothetical protein; Provisional	99.14
PLN03209	576	translocon at the inner envelope of chloroplast su	99.14
PLN02214	342	cinnamoyl-CoA reductase	99.13
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.11
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.11
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.08
PLN02650	351	dihydroflavonol-4-reductase	99.07
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.06
KOG4022|consensus	236		99.05
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.01
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.0
KOG1371|consensus	343		98.97
PLN02583	297	cinnamoyl-CoA reductase	98.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.97
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	98.96
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.94
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.94
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.87
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.82
PLN02427	386	UDP-apiose/xylose synthase	98.8
PLN02260	668	probable rhamnose biosynthetic enzyme	98.79
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.77
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.76
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.72
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.71
KOG1502|consensus	327		98.68
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.66
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.66
PLN02686	367	cinnamoyl-CoA reductase	98.64
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.64
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.57
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.56
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.55
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.55
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.53
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.46
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.41
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.41
PLN02206	442	UDP-glucuronate decarboxylase	98.37
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.32
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.31
PLN02778	298	3,5-epimerase/4-reductase	98.25
KOG0747|consensus	331		98.21
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.19
PLN02996	491	fatty acyl-CoA reductase	98.18
PLN02260	668	probable rhamnose biosynthetic enzyme	98.12
PRK05865	854	hypothetical protein; Provisional	98.09
CHL00194	317	ycf39 Ycf39; Provisional	97.96
PRK07201	657	short chain dehydrogenase; Provisional	97.94
COG3320	382	Putative dehydrogenase domain of multifunctional n	97.68
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.54
KOG1202|consensus	2376		97.43
KOG1430|consensus	361		97.38
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.24
PLN02503	605	fatty acyl-CoA reductase 2	97.1
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.01
PRK12320	699	hypothetical protein; Provisional	96.7
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	96.65
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.62
KOG1429|consensus	350		96.46
PRK08309	177	short chain dehydrogenase; Provisional	96.41
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.23
KOG1431|consensus	315		95.6
PLN00016	378	RNA-binding protein; Provisional	95.24
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.17
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	95.04
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	94.4
KOG2865|consensus	391		93.66
COG2910	211	Putative NADH-flavin reductase [General function p	93.33
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	93.24
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	92.69
KOG2774|consensus	366		91.6
KOG1221|consensus	467		91.43
PLN00106	323	malate dehydrogenase	85.94
PRK09620	229	hypothetical protein; Provisional	82.54
KOG1372|consensus	376		80.16

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.98  E-value=2.5e-31  Score=190.98  Aligned_cols=161  Identities=22%  Similarity=0.250  Sum_probs=146.4

Q ss_pred             cccccccccceeccCCCC-------CCC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.+.|+.+...++..+       +.+ +.+..+..|++|.++++.+++.+.+ |+++|+||||||....+++.+.+.+
T Consensus        24 ~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~  103 (246)
T COG4221          24 RALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLD  103 (246)
T ss_pred             HHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHH
Confidence            678888998888875543       233 6799999999999999999999999 9999999999999988999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.|+++|+.|.++.+++++|.|.+++.|.||++||++|.+++|+...|+++|+++..|++.|+.|+....+.++...|
T Consensus       104 dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~P  183 (246)
T COG4221         104 DWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISP  183 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987788888899


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      +...+.....
T Consensus       184 G~v~~~~~s~  193 (246)
T COG4221         184 GLVETTEFST  193 (246)
T ss_pred             ceecceeccc
Confidence            9886654444

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.97  E-value=1.1e-30  Score=192.36  Aligned_cols=160  Identities=21%  Similarity=0.287  Sum_probs=150.1

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.+..+++...           ..+.++.++.+|+++++++.++.+++.+ ++.||+||||||+...++|.+.
T Consensus        24 ~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~  103 (265)
T COG0300          24 KQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLEL  103 (265)
T ss_pred             HHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhC
Confidence            568889999999875443           2457889999999999999999999999 7899999999999999999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      ++++.+.++++|+.++..++++++|.|.+++.|+||+|+|.+++.|.|..+.|++||+++.+|+++|+.|+...++.|.+
T Consensus       104 ~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~  183 (265)
T COG0300         104 SLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTA  183 (265)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988899999


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|+++.|++++
T Consensus       184 v~PG~~~T~f~~  195 (265)
T COG0300         184 VCPGPTRTEFFD  195 (265)
T ss_pred             EecCcccccccc
Confidence            999999999996

>KOG1205|consensus

Probab=99.97  E-value=8.6e-31  Score=194.25  Aligned_cols=139  Identities=28%  Similarity=0.314  Sum_probs=127.9

Q ss_pred             eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC
Q psy5462          26 VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTG  104 (182)
Q Consensus        26 ~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  104 (182)
                      ++++++||++|.+++.++++.+.+ ||++|+||||||+.......+.+.+++..++++|++|++.++++++|+|++++.|
T Consensus        64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~G  143 (282)
T KOG1205|consen   64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDG  143 (282)
T ss_pred             ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCC
Confidence            699999999999999999999999 9999999999999987777788999999999999999999999999999999889


Q ss_pred             eEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee-eeCCCccccccccc
Q psy5462         105 HIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT-VTTPLRSVTILYQR  164 (182)
Q Consensus       105 ~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~-v~~~~~~~~~~~~~  164 (182)
                      +||++||++|+.+.|..+.|++||+|+.+|.++|+.|+......+. +.+||++.|++...
T Consensus       144 hIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  144 HIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTGK  204 (282)
T ss_pred             eEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccch
Confidence            9999999999999999999999999999999999999986442233 68999999986654

>KOG1201|consensus

Probab=99.95  E-value=9.2e-28  Score=176.99  Aligned_cols=159  Identities=33%  Similarity=0.455  Sum_probs=139.7

Q ss_pred             ccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           5 RTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      .++++|..+...+-..+          .. ++++.+.||+||.+++.+..+.+++ .|++|++|||||+....++.+.+.
T Consensus        57 efa~rg~~~vl~Din~~~~~etv~~~~~~-g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d  135 (300)
T KOG1201|consen   57 EFAKRGAKLVLWDINKQGNEETVKEIRKI-GEAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSD  135 (300)
T ss_pred             HHHHhCCeEEEEeccccchHHHHHHHHhc-CceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCH
Confidence            45667775544442221          12 3799999999999999999999999 999999999999999888999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC---Ccccee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY---MLWGTT  150 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~---~~~~i~  150 (182)
                      ++++.++++|+.|.++.+++++|.|.++..|+||+|+|.+|..+.++...|++||+|+.+|.++|..|+..   ..+..+
T Consensus       136 ~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktT  215 (300)
T KOG1201|consen  136 EEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTT  215 (300)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999773   446777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +.+|+...|.+.+.
T Consensus       216 lv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  216 LVCPYFINTGMFDG  229 (300)
T ss_pred             EEeeeeccccccCC
Confidence            88998888877764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.5e-27  Score=176.39  Aligned_cols=159  Identities=13%  Similarity=0.130  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...++...          . .+.++.++.+|++|+++++++++.+.++|++|++|||||.....++.+.+
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~  105 (263)
T PRK08339         26 RVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMS  105 (263)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCC
Confidence            457778888877654321          1 24578899999999999999999885589999999999987777788899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++.++++++|+|++++.|+||++||.++..+.+....|+++|+++.+|+++++.|+++.++.++..
T Consensus       106 ~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v  185 (263)
T PRK08339        106 MEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGI  185 (263)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            99999999999999999999999999988789999999999888888899999999999999999999999776677777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      +|++..|+..
T Consensus       186 ~PG~v~T~~~  195 (263)
T PRK08339        186 MPGIIRTDRV  195 (263)
T ss_pred             EeCcCccHHH
Confidence            8998888754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.95  E-value=5.4e-27  Score=174.82  Aligned_cols=160  Identities=18%  Similarity=0.221  Sum_probs=139.3

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+.+..        ...+.++.++.+|++|+++++++++.+.+ +|++|++|||||.....++.+.+.+
T Consensus        26 ~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~  105 (251)
T PRK12481         26 IGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNK  105 (251)
T ss_pred             HHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHH
Confidence            46778888887665321        12356788999999999999999999988 9999999999998877778888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      +|+.++++|+.+++.+++++.|+|.+++ +|+||++||..++.+.+....|+++|+++.+|+++++.|+++.++.++..+
T Consensus       106 ~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~  185 (251)
T PRK12481        106 DWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIA  185 (251)
T ss_pred             HHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence            9999999999999999999999998765 589999999999888888899999999999999999999987767777778


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|+...
T Consensus       186 PG~v~t~~~~  195 (251)
T PRK12481        186 PGYMATDNTA  195 (251)
T ss_pred             cCCCccCchh
Confidence            9988877543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.95  E-value=2.8e-26  Score=171.66  Aligned_cols=158  Identities=28%  Similarity=0.339  Sum_probs=139.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.+..+.+.... ..++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+.++++
T Consensus        24 ~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~  102 (258)
T PRK06398         24 NRLKEEGSNVINFDIKEPS-YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINV  102 (258)
T ss_pred             HHHHHCCCeEEEEeCCccc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence            4677889988877654432 34688999999999999999999998 999999999999977778888999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.+++.++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|++.. +.++..+|++..|+..
T Consensus       103 n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~  181 (258)
T PRK06398        103 NVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLL  181 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHH
Confidence            999999999999999988778999999999998888899999999999999999999999864 6677778988877754


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       182 ~  182 (258)
T PRK06398        182 E  182 (258)
T ss_pred             h
Confidence            3

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.95  E-value=1.4e-26  Score=174.65  Aligned_cols=156  Identities=14%  Similarity=0.173  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~   68 (182)
                      ++|.++|+.+...++..          ...+.. .+++||++|+++++++++.+.+ +|++|++|||||...+    +++
T Consensus        25 ~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~  103 (274)
T PRK08415         25 KACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSF  103 (274)
T ss_pred             HHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccccc
Confidence            45677888877654321          111333 6789999999999999999999 9999999999998642    567


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+.++++|+.++++++++++|+|.+  +|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|+++.++.
T Consensus       104 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIr  181 (274)
T PRK08415        104 LETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIR  181 (274)
T ss_pred             ccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeE
Confidence            78899999999999999999999999999965  4899999999888888888999999999999999999999877667


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      ++..+|++..|+..
T Consensus       182 Vn~v~PG~v~T~~~  195 (274)
T PRK08415        182 VNAISAGPIKTLAA  195 (274)
T ss_pred             EEEEecCccccHHH
Confidence            77779998888654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.9e-26  Score=172.03  Aligned_cols=157  Identities=11%  Similarity=0.073  Sum_probs=134.5

Q ss_pred             cccccccccceeccCCC------CC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL------PT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~~~   71 (182)
                      ++|+++|+.+....+..      .+ .+.++.+++||++|+++++++++.+.+ +|++|++|||||...+    +++.+.
T Consensus        27 ~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~  106 (252)
T PRK06079         27 QAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDT  106 (252)
T ss_pred             HHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccC
Confidence            46778888887765321      11 134678999999999999999999998 9999999999998653    567888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++.+++++.|+|++  +|+||++||.++..+.+.+..|+++|+|+.+|+++++.|+++.++.++.
T Consensus       107 ~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~  184 (252)
T PRK06079        107 SRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNA  184 (252)
T ss_pred             CHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999999999999999999864  4899999999988888889999999999999999999999977677777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|+++.|+..
T Consensus       185 i~PG~v~T~~~  195 (252)
T PRK06079        185 ISAGAVKTLAV  195 (252)
T ss_pred             EecCccccccc
Confidence            79998888754

>KOG1200|consensus

Probab=99.94  E-value=1.3e-26  Score=160.57  Aligned_cols=163  Identities=19%  Similarity=0.151  Sum_probs=142.6

Q ss_pred             cccccccccceeccCCCCC-------CC--ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KT--HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~--~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      .+|.++|+++.+.+.....       .+  ++...|.||++++.+++..+++..+ +|.++++|||||+.....+..++.
T Consensus        32 ~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq  111 (256)
T KOG1200|consen   32 QLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQ  111 (256)
T ss_pred             HHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccH
Confidence            3567788888887744431       22  4677899999999999999999999 999999999999999988999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhC--CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLEN--NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      ++|+..+.+|+.|.|+++|++.+.|...  .+++||++||+-|..+.-++..|+++|+++.+|+|+.|+|++..++.+++
T Consensus       112 ~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~  191 (256)
T KOG1200|consen  112 EQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNV  191 (256)
T ss_pred             HHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeE
Confidence            9999999999999999999999985543  35699999999999999999999999999999999999999988778888


Q ss_pred             eCCCcccccccccch
Q psy5462         152 TTPLRSVTILYQRSV  166 (182)
Q Consensus       152 ~~~~~~~~~~~~~~~  166 (182)
                      +.|+...+++.+..+
T Consensus       192 VlPGFI~tpMT~~mp  206 (256)
T KOG1200|consen  192 VLPGFIATPMTEAMP  206 (256)
T ss_pred             eccccccChhhhhcC
Confidence            899988888876643

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=2.6e-26  Score=172.98  Aligned_cols=156  Identities=13%  Similarity=0.088  Sum_probs=131.6

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~   68 (182)
                      ++|.++|+.|...++..          ...+ ...+++||++|+++++++++.+.+ +|++|++|||||....    .++
T Consensus        27 ~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~  105 (271)
T PRK06505         27 KQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRY  105 (271)
T ss_pred             HHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCCh
Confidence            46778888887764321          1112 235789999999999999999999 9999999999998643    467


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+.++++|+.++++++++++|+|.+  +|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|+++.++.
T Consensus       106 ~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIr  183 (271)
T PRK06505        106 ADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIR  183 (271)
T ss_pred             hhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeE
Confidence            78899999999999999999999999999974  4899999999988888889999999999999999999999977666


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      ++..+|++..|+..
T Consensus       184 Vn~v~PG~i~T~~~  197 (271)
T PRK06505        184 VNAISAGPVRTLAG  197 (271)
T ss_pred             EEEEecCCcccccc
Confidence            67778888877654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.94  E-value=1.6e-26  Score=172.92  Aligned_cols=157  Identities=16%  Similarity=0.170  Sum_probs=132.5

Q ss_pred             cccccccccceeccCC------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----C
Q psy5462           4 DRTTGHIHGILFIPWC------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----S   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~   66 (182)
                      ++|.++|+.+......            +...+.++.++++|++|+++++++++.+.+ +|++|++|||||....    .
T Consensus        26 ~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~  105 (258)
T PRK07370         26 QQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIG  105 (258)
T ss_pred             HHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccC
Confidence            4567788887655311            111234577899999999999999999999 9999999999997642    5


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      ++.+.+.++|+.++++|+.+++.++++++|.|++  +|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|+++.+
T Consensus       106 ~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~g  183 (258)
T PRK07370        106 DFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKN  183 (258)
T ss_pred             cchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCcCC
Confidence            6778899999999999999999999999999975  48999999999888888999999999999999999999999776


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.++...|++..|+..
T Consensus       184 I~Vn~i~PG~v~T~~~  199 (258)
T PRK07370        184 IRVNAISAGPIRTLAS  199 (258)
T ss_pred             eEEEEEecCcccCchh
Confidence            6777778998887754

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.2e-26  Score=169.11  Aligned_cols=159  Identities=23%  Similarity=0.212  Sum_probs=137.9

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+++...          .  .+.++.++.||++|++++.++++.+.+ ++++|++|||||.....++.+
T Consensus        25 ~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  104 (260)
T PRK07063         25 RAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLA  104 (260)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhh
Confidence            457788888877654221          1  356788999999999999999999999 999999999999876666777


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+.++++|+.++++++++++|+|.+++.|+||++||..+..+.++...|+++|+++..|+++++.|+++.++.+.
T Consensus       105 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn  184 (260)
T PRK07063        105 MTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVN  184 (260)
T ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence            88999999999999999999999999998877899999999998888888999999999999999999999987666666


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      ..+|++..|+..
T Consensus       185 ~v~PG~v~t~~~  196 (260)
T PRK07063        185 AIAPGYIETQLT  196 (260)
T ss_pred             EEeeCCccChhh
Confidence            668888877764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1e-25  Score=168.57  Aligned_cols=157  Identities=13%  Similarity=0.075  Sum_probs=133.3

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC----CCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA----SSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~----~~~   67 (182)
                      ++|+++|+.+....+...          . .+.++.+++||++|+++++++++.+.+ +|++|++|||||...    ..+
T Consensus        27 ~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~  106 (257)
T PRK08594         27 RSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGE  106 (257)
T ss_pred             HHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCc
Confidence            567788888876642210          1 145788999999999999999999998 999999999999764    246


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|...+++|+.+++.++++++|+|.+  +|+||++||..+..+.+.+..|+++|+|+.+|+++++.|+++.++
T Consensus       107 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI  184 (257)
T PRK08594        107 FLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGI  184 (257)
T ss_pred             cccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCC
Confidence            678899999999999999999999999999864  589999999999888888899999999999999999999997666


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .++..+|++..|+..
T Consensus       185 rvn~v~PG~v~T~~~  199 (257)
T PRK08594        185 RVNAISAGPIRTLSA  199 (257)
T ss_pred             EEeeeecCcccCHhH
Confidence            777778888887653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.3e-26  Score=174.09  Aligned_cols=159  Identities=17%  Similarity=0.182  Sum_probs=139.3

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.+|++|+++++++++.+.+ ++++|++|||||....+++.+.+
T Consensus        25 ~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~  104 (330)
T PRK06139         25 EAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETP  104 (330)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCC
Confidence            45677888887765322          23456788999999999999999999999 89999999999998888889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC-ccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM-LWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~-~~~i~v  151 (182)
                      .++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.|....|+++|+++.+|+++|+.|+... ++.+..
T Consensus       105 ~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~  184 (330)
T PRK06139        105 IEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCD  184 (330)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence            9999999999999999999999999998888999999999998888999999999999999999999999753 566777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..|+..
T Consensus       185 v~Pg~v~T~~~  195 (330)
T PRK06139        185 VYPAFMDTPGF  195 (330)
T ss_pred             EecCCccCccc
Confidence            78888877754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=169.90  Aligned_cols=160  Identities=26%  Similarity=0.355  Sum_probs=139.4

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...+..          +...+.++.++.||++|++++.++++.+.+ +|++|++|||||....+++.+.+
T Consensus        24 ~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~  103 (275)
T PRK05876         24 TEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMT  103 (275)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCC
Confidence            4567788887765532          122355788999999999999999999988 99999999999998778888999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+.++++|+.++++++++++|.|.+++ +|+||++||.+++.+.++...|+++|+++.+|+++|+.|++..++.+.+
T Consensus       104 ~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~  183 (275)
T PRK05876        104 HDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSV  183 (275)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            999999999999999999999999998776 6899999999999898999999999999999999999999876677888


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..++...
T Consensus       184 v~Pg~v~t~~~~  195 (275)
T PRK05876        184 LCPMVVETNLVA  195 (275)
T ss_pred             EEeCcccccccc
Confidence            889888777543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.1e-25  Score=168.45  Aligned_cols=158  Identities=15%  Similarity=0.107  Sum_probs=133.0

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|+++|+.+.+.++...         .....+.+++||++|+++++++++.+.+ +|++|++|||||....    +++.
T Consensus        30 ~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~  109 (258)
T PRK07533         30 RAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVV  109 (258)
T ss_pred             HHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcc
Confidence            456778888776654321         1112356899999999999999999999 9999999999998643    4677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+.++++|+.+++++++.++|+|++  +|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++..++.+
T Consensus       110 ~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~V  187 (258)
T PRK07533        110 DCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRV  187 (258)
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            8899999999999999999999999999964  58999999998888888889999999999999999999999776677


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      +..+|++..|+...
T Consensus       188 n~v~PG~v~T~~~~  201 (258)
T PRK07533        188 HAISPGPLKTRAAS  201 (258)
T ss_pred             EEEecCCcCChhhh
Confidence            77799988887653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=8.1e-26  Score=169.43  Aligned_cols=159  Identities=14%  Similarity=0.112  Sum_probs=131.0

Q ss_pred             cccccccccceeccCC---------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC----C-c
Q psy5462           4 DRTTGHIHGILFIPWC---------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS----S-V   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~----~-~   68 (182)
                      ++|.++|+.+......         +....+....++||++|+++++++++.+.+ ++++|++|||||.....    + +
T Consensus        26 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  105 (261)
T PRK08690         26 KACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFL  105 (261)
T ss_pred             HHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchh
Confidence            4567788877654311         111223456799999999999999999999 99999999999986532    2 3


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+.++++|+.+++++++++.|.|+++ +|+||++||.++..+.+++..|+++|+|+.+|+++++.|+++.++.
T Consensus       106 ~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIr  184 (261)
T PRK08690        106 DSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIR  184 (261)
T ss_pred             hhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeE
Confidence            567889999999999999999999999998754 4899999999988888899999999999999999999999977667


Q ss_pred             eeeeCCCcccccccc
Q psy5462         149 TTVTTPLRSVTILYQ  163 (182)
Q Consensus       149 i~v~~~~~~~~~~~~  163 (182)
                      +...+|++..|+...
T Consensus       185 Vn~i~PG~v~T~~~~  199 (261)
T PRK08690        185 CNGISAGPIKTLAAS  199 (261)
T ss_pred             EEEEecCcccchhhh
Confidence            777799988887643

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=1.6e-25  Score=167.30  Aligned_cols=139  Identities=19%  Similarity=0.201  Sum_probs=126.5

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN  101 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  101 (182)
                      .+.++.++++|++|.+++.++++.+.+ +|++|++|||||.....++.+.+.++|+.++++|+.+++.++++++|.|.++
T Consensus        66 ~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  145 (256)
T PRK12859         66 NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK  145 (256)
T ss_pred             cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc
Confidence            356788999999999999999999998 9999999999998777778889999999999999999999999999999887


Q ss_pred             CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         102 NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       102 ~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +.|+||++||..+..+.+++..|+++|+++..|+++++.|+.+..+.+....|++..++.
T Consensus       146 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        146 SGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             CCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence            789999999999988888999999999999999999999998766666666888877764

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.6e-25  Score=166.86  Aligned_cols=160  Identities=20%  Similarity=0.174  Sum_probs=138.9

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+.+...          .  .+.++.++.+|++|++++.++++.+.+ ++++|++|||||.....++.+
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~  105 (265)
T PRK07062         26 ELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFAD  105 (265)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh
Confidence            456677888876654321          1  134788999999999999999999998 999999999999877778888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|...+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|+++.+++++++.|++..++.+.
T Consensus       106 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~  185 (265)
T PRK07062        106 TTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVN  185 (265)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            89999999999999999999999999999887899999999999888888999999999999999999999987766777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ..+|++..|+.+.
T Consensus       186 ~i~PG~v~t~~~~  198 (265)
T PRK07062        186 SILLGLVESGQWR  198 (265)
T ss_pred             EEecCccccchhh
Confidence            7789888877643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=2e-25  Score=167.19  Aligned_cols=157  Identities=13%  Similarity=0.102  Sum_probs=130.2

Q ss_pred             cccccccccceeccCCC---------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCL---------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.+....+..         ....+...+++||++|+++++++++.+.+ ||++|++|||||....    .++.
T Consensus        28 ~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~  107 (260)
T PRK06603         28 QLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYV  107 (260)
T ss_pred             HHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccc
Confidence            45677888876654321         01112234679999999999999999999 9999999999997542    4677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++.+++.+.|+|++  +|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++..++.+
T Consensus       108 ~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrV  185 (260)
T PRK06603        108 DTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRV  185 (260)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEE
Confidence            8899999999999999999999999999864  48999999998888888899999999999999999999999766667


Q ss_pred             eeeCCCccccccc
Q psy5462         150 TVTTPLRSVTILY  162 (182)
Q Consensus       150 ~v~~~~~~~~~~~  162 (182)
                      +..+|++..|+..
T Consensus       186 n~v~PG~v~T~~~  198 (260)
T PRK06603        186 NAISAGPIKTLAS  198 (260)
T ss_pred             EEEecCcCcchhh
Confidence            7778888877753

>PRK08589 short chain dehydrogenase; Validated

Probab=99.93  E-value=2.4e-25  Score=167.80  Aligned_cols=159  Identities=24%  Similarity=0.289  Sum_probs=137.0

Q ss_pred             cccccccccceeccCC---------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC---------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~   72 (182)
                      ++|.++|+.+..+++.         +...+.++.++.||+++++++.++++.+.+ +|++|++|||||.... .++.+.+
T Consensus        24 ~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~  103 (272)
T PRK08589         24 IALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYP  103 (272)
T ss_pred             HHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCC
Confidence            4567788888777643         112345789999999999999999999999 9999999999998653 5677889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .+.|+.++++|+.+++.++++++|+|.+++ |+||++||..+..+.+....|+++|+++..|+++++.|++..++.+++.
T Consensus       104 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v  182 (272)
T PRK08589        104 VDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAI  182 (272)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            999999999999999999999999998765 8999999999988888889999999999999999999998776777777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..|+...
T Consensus       183 ~PG~v~T~~~~  193 (272)
T PRK08589        183 APGTIETPLVD  193 (272)
T ss_pred             ecCcccCchhh
Confidence            89888777643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4e-25  Score=164.95  Aligned_cols=160  Identities=21%  Similarity=0.196  Sum_probs=137.3

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+...++...           ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||.....++.+.
T Consensus        26 ~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  105 (254)
T PRK06114         26 IGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEM  105 (254)
T ss_pred             HHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhC
Confidence            456778888877664321           1245788999999999999999999999 9999999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC--CCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~--~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.++|+..+++|+.+++.+++++.+.|++++.++||++||.++..+.+  ....|+++|+++..++++++.|+...++.+
T Consensus       106 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v  185 (254)
T PRK06114        106 EEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRV  185 (254)
T ss_pred             CHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            999999999999999999999999999888789999999988876544  368999999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ++..|++..++...
T Consensus       186 ~~v~PG~i~t~~~~  199 (254)
T PRK06114        186 NSISPGYTATPMNT  199 (254)
T ss_pred             EEEeecCccCcccc
Confidence            77799988887653

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=2e-25  Score=167.25  Aligned_cols=157  Identities=12%  Similarity=0.084  Sum_probs=127.9

Q ss_pred             cccccccccceeccCC---------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC----C-c
Q psy5462           4 DRTTGHIHGILFIPWC---------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS----S-V   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~----~-~   68 (182)
                      ++|.++|+.+......         +....+....+.||++|+++++++++.+.+ +|++|++|||||.....    + +
T Consensus        26 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~  105 (260)
T PRK06997         26 KACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFL  105 (260)
T ss_pred             HHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccc
Confidence            4567778887664311         001112235789999999999999999999 99999999999986432    2 3


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+..+++|+.++++++++++|+|.+  .|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|+++.++.
T Consensus       106 ~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIr  183 (260)
T PRK06997        106 DGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIR  183 (260)
T ss_pred             hhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            46788999999999999999999999999943  4899999999988888888999999999999999999999876666


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      ++..+|++..|+..
T Consensus       184 Vn~i~PG~v~T~~~  197 (260)
T PRK06997        184 ANGISAGPIKTLAA  197 (260)
T ss_pred             EEEEeeCccccchh
Confidence            66668998877643

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.3e-25  Score=168.14  Aligned_cols=157  Identities=19%  Similarity=0.183  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCC-------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL-------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~   63 (182)
                      ++|+++|+.+.+.+...                   ...+.++.++.||++|++++.++++.+.+ +|++|++|||||..
T Consensus        24 ~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~  103 (286)
T PRK07791         24 LAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGIL  103 (286)
T ss_pred             HHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence            34667788776654322                   12245788999999999999999999999 99999999999988


Q ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccccccccCCCchhhhhHHHHHHHHHH
Q psy5462          64 ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~  137 (182)
                      ...++.+.+.++|+..+++|+.++++++++++|+|+++.      .|+||++||.++..+.+....|+++|+|+.+|+++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~  183 (286)
T PRK07791        104 RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLV  183 (286)
T ss_pred             CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHH
Confidence            777788899999999999999999999999999997642      37999999999988989999999999999999999


Q ss_pred             HHhhhCCCccceeeeCCCcccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      ++.|++..++.++..+|+ ..|.+
T Consensus       184 la~el~~~gIrVn~v~Pg-~~T~~  206 (286)
T PRK07791        184 AAAELGRYGVTVNAIAPA-ARTRM  206 (286)
T ss_pred             HHHHHHHhCeEEEEECCC-CCCCc
Confidence            999998665556666776 34443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=3.8e-25  Score=165.81  Aligned_cols=157  Identities=14%  Similarity=0.073  Sum_probs=129.0

Q ss_pred             cccccccccceeccCC---------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC-----c
Q psy5462           4 DRTTGHIHGILFIPWC---------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS-----V   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~-----~   68 (182)
                      ++|.++|+.+...++.         +....+++..+.||++|+++++++++.+.+ ||++|++|||||......     +
T Consensus        26 ~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~  105 (262)
T PRK07984         26 QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV  105 (262)
T ss_pred             HHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcch
Confidence            4567788887665432         111224567899999999999999999999 999999999999764322     5


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+.++++|+.+++.+++.+.|.+.  ++|+||++||..+..+.+.+..|+++|+|+.+|+++++.|+++.++.
T Consensus       106 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIr  183 (262)
T PRK07984        106 NAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR  183 (262)
T ss_pred             hhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcE
Confidence            5678899999999999999999999988654  34899999999888888889999999999999999999999977666


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      ++...|++..|+..
T Consensus       184 Vn~i~PG~v~T~~~  197 (262)
T PRK07984        184 VNAISAGPIRTLAA  197 (262)
T ss_pred             EeeeecCcccchHH
Confidence            77778888877643

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.2e-25  Score=164.75  Aligned_cols=160  Identities=21%  Similarity=0.163  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.+..+.+..          ...+.++.++.||++++++++++++.+.+ ++++|++|||||... ..++.+.
T Consensus        24 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~  103 (254)
T PRK07478         24 KLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEM  103 (254)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhC
Confidence            45677888877765322          22345788999999999999999999999 999999999999864 3567788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.+++.++++++|.|++++.++||++||..+. .+.+....|+++|++++.++++++.|++..++.+.
T Consensus       104 ~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (254)
T PRK07478        104 SLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVN  183 (254)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence            99999999999999999999999999998888999999998876 46788899999999999999999999987666666


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..|++..
T Consensus       184 ~v~PG~v~t~~~~  196 (254)
T PRK07478        184 ALLPGGTDTPMGR  196 (254)
T ss_pred             EEeeCcccCcccc
Confidence            7789988887543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.93  E-value=3.7e-25  Score=166.77  Aligned_cols=157  Identities=14%  Similarity=0.093  Sum_probs=131.1

Q ss_pred             cccccccccceeccCCC---------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCL---------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.+....+..         ...-+....+++|++|+++++++++.+.+ +|++|++|||||....    .++.
T Consensus        30 ~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~  109 (272)
T PRK08159         30 KACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYV  109 (272)
T ss_pred             HHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcc
Confidence            46777888876654220         01112356789999999999999999998 9999999999998642    4677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+.++++|+.+++.+++++.|+|++  +|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|+++.++.+
T Consensus       110 ~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrV  187 (272)
T PRK08159        110 DTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRV  187 (272)
T ss_pred             cCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEE
Confidence            8899999999999999999999999999854  48999999988888888899999999999999999999999776677


Q ss_pred             eeeCCCccccccc
Q psy5462         150 TVTTPLRSVTILY  162 (182)
Q Consensus       150 ~v~~~~~~~~~~~  162 (182)
                      +..+|++..|...
T Consensus       188 n~v~PG~v~T~~~  200 (272)
T PRK08159        188 NAISAGPIKTLAA  200 (272)
T ss_pred             EEeecCCcCCHHH
Confidence            7779998877654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.93  E-value=2e-25  Score=165.36  Aligned_cols=157  Identities=24%  Similarity=0.278  Sum_probs=136.2

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCC----C
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVAS----S   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~----~   66 (182)
                      ++|.++|+.|.+.......           .+.+  ++.||++++++++++++.+.+ + |++|++|||+|....    .
T Consensus        14 ~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~   91 (241)
T PF13561_consen   14 RALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEK   91 (241)
T ss_dssp             HHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSS
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCC
Confidence            5678889998888744432           2333  599999999999999999999 9 999999999998775    6


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC-C
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY-M  145 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~  145 (182)
                      ++.+.+.++|+..+++|+.+++.+++++.|+|.++  |+||++||..+..+.+.+..|+++|+++++|++++|.||++ .
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~  169 (241)
T PF13561_consen   92 PLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAPKK  169 (241)
T ss_dssp             SGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHG
T ss_pred             ChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhcccc
Confidence            78888999999999999999999999999988774  89999999998888899999999999999999999999997 7


Q ss_pred             ccceeeeCCCccccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++.++++.|++..++....
T Consensus       170 gIrVN~V~pG~i~t~~~~~  188 (241)
T PF13561_consen  170 GIRVNAVSPGPIETPMTER  188 (241)
T ss_dssp             TEEEEEEEESSBSSHHHHH
T ss_pred             Ceeeeeecccceeccchhc
Confidence            6666666888888776544

...

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.93  E-value=7e-25  Score=163.58  Aligned_cols=160  Identities=21%  Similarity=0.216  Sum_probs=136.9

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..++...        ...+.++..+++|++|+++++++++.+.+ ++++|++|||||.....++.+.+.+
T Consensus        28 ~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~  107 (253)
T PRK08993         28 LGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEK  107 (253)
T ss_pred             HHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHH
Confidence            45677788876554221        12245788999999999999999999988 9999999999998777778888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      +|+..+++|+.+++++++++.|.|.+++ +|+||++||..++.+.+....|+++|+|++.++++++.|+...++.+....
T Consensus       108 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~  187 (253)
T PRK08993        108 DWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIA  187 (253)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEe
Confidence            9999999999999999999999998765 589999999998888888899999999999999999999987666777779


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|+...
T Consensus       188 pG~v~T~~~~  197 (253)
T PRK08993        188 PGYMATNNTQ  197 (253)
T ss_pred             eCcccCcchh
Confidence            9988887543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=163.14  Aligned_cols=160  Identities=21%  Similarity=0.255  Sum_probs=141.5

Q ss_pred             cccccccccceeccCCCCC--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+++....  ...+++++.||++|+++++++++.+.+ ++++|++|||||....+.+.+.+.++++.++
T Consensus        22 ~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~  101 (270)
T PRK06179         22 EKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALF  101 (270)
T ss_pred             HHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHH
Confidence            4677889998888765432  234688999999999999999999999 9999999999999877888888999999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++|+.+++++++.++|+|++++.++||++||..++.+.+....|+++|++++.++++++.|++..++.+.+..|++..+.
T Consensus       102 ~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~  181 (270)
T PRK06179        102 DTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN  181 (270)
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence            99999999999999999998888999999999998888889999999999999999999999877777888888887776


Q ss_pred             ccc
Q psy5462         161 LYQ  163 (182)
Q Consensus       161 ~~~  163 (182)
                      ...
T Consensus       182 ~~~  184 (270)
T PRK06179        182 FDA  184 (270)
T ss_pred             ccc
Confidence            543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=7.7e-25  Score=163.46  Aligned_cols=159  Identities=24%  Similarity=0.260  Sum_probs=134.2

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+..+....+..     ..++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+
T Consensus        25 ~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~  104 (255)
T PRK06463         25 EAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYN  104 (255)
T ss_pred             HHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHH
Confidence            46778888877654322110     11477899999999999999999999 9999999999998766778888999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      .++++|+.+++++++.++|.|++++.++||++||..++. +.++...|+++|+|+++|+++++.|++..++.+.+.+|++
T Consensus       105 ~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~  184 (255)
T PRK06463        105 KMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGW  184 (255)
T ss_pred             HHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCC
Confidence            999999999999999999999877789999999988764 4466789999999999999999999987666777779998


Q ss_pred             cccccc
Q psy5462         157 SVTILY  162 (182)
Q Consensus       157 ~~~~~~  162 (182)
                      ..++..
T Consensus       185 v~t~~~  190 (255)
T PRK06463        185 VETDMT  190 (255)
T ss_pred             CCCchh
Confidence            877764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.4e-25  Score=163.08  Aligned_cols=161  Identities=20%  Similarity=0.189  Sum_probs=135.3

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+....+..          ...+.++..+.+|++|++++.++++.+.+ ++++|++|||||.....++.+.+
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~  106 (253)
T PRK05867         27 LAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMP  106 (253)
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCC
Confidence            45777888877765432          12346788999999999999999999999 99999999999988777788889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccccc-C-CCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAA-V-NVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~-~-~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .++|+.++++|+.+++.+++++.|+|.+++ +++||++||..+..+. + ....|+++|++++.++++++.|+++.++.+
T Consensus       107 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v  186 (253)
T PRK05867        107 LEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRV  186 (253)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEE
Confidence            999999999999999999999999998765 5799999998775432 3 457999999999999999999998776677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      ....|++..|+....
T Consensus       187 n~i~PG~v~t~~~~~  201 (253)
T PRK05867        187 NSVSPGYILTELVEP  201 (253)
T ss_pred             EEeecCCCCCccccc
Confidence            777899888876543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=162.56  Aligned_cols=159  Identities=21%  Similarity=0.244  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCC---------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCL---------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+...-         ...+.++.++.||+++++++.++++.+.+ +|++|++|||+|.....++.+.+.
T Consensus        33 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~  112 (258)
T PRK06935         33 VALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKD  112 (258)
T ss_pred             HHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCH
Confidence            45677888887775431         12345788999999999999999999999 999999999999877777788889


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.+++.+++++.|+|++++.++||++||..+..+.+....|+++|++++.++++++.|++..++.+++..
T Consensus       113 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~  192 (258)
T PRK06935        113 EDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIA  192 (258)
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEE
Confidence            99999999999999999999999999888899999999998888888899999999999999999999987767777778


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..++..
T Consensus       193 PG~v~t~~~  201 (258)
T PRK06935        193 PGYIKTANT  201 (258)
T ss_pred             eccccccch
Confidence            988777653

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=166.05  Aligned_cols=159  Identities=15%  Similarity=0.064  Sum_probs=129.3

Q ss_pred             cccccccccceeccCCC--------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc-c
Q psy5462           4 DRTTGHIHGILFIPWCL--------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA-G   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a-g   61 (182)
                      ++|+++|+.|...++..                    ...+.++.++.||++|+++++++++.+.+ ||++|++|||| |
T Consensus        26 ~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         26 VELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcc
Confidence            45667788777665431                    11244678899999999999999999999 99999999999 7


Q ss_pred             CCC----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc---ccCCCchhhhhHHHHHHH
Q psy5462          62 IVA----SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT---AAVNVSAYFASKYGVTEN  134 (182)
Q Consensus        62 ~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~---~~~~~~~y~~sKaa~~~~  134 (182)
                      ...    ..++.+.+.++|..++++|+.+++.++++++|+|.+++.|+||++||..+..   +.+....|+++|+|+.+|
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~l  185 (305)
T PRK08303        106 GEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRL  185 (305)
T ss_pred             cccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHH
Confidence            431    2566778899999999999999999999999999887779999999976543   233567899999999999


Q ss_pred             HHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         135 HPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       135 ~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      +++|+.|+++.++.+...+|++..|++.
T Consensus       186 t~~La~el~~~gIrVn~v~PG~v~T~~~  213 (305)
T PRK08303        186 AFSLAHELAPHGATAVALTPGWLRSEMM  213 (305)
T ss_pred             HHHHHHHhhhcCcEEEEecCCccccHHH
Confidence            9999999997656666668888877753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=1.1e-24  Score=163.19  Aligned_cols=159  Identities=16%  Similarity=0.038  Sum_probs=134.8

Q ss_pred             cccccccccceeccCCC-----------C-CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC------
Q psy5462           4 DRTTGHIHGILFIPWCL-----------P-TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA------   64 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~-~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~------   64 (182)
                      ++|.++|+.+..+...-           . ..+.++.++.||++|+++++++++.+.+ ++++|++|||||...      
T Consensus        26 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  105 (260)
T PRK08416         26 YEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGG  105 (260)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccc
Confidence            45677788876653211           1 1245789999999999999999999999 999999999998653      


Q ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          65 SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ..++.+.+.++|...+++|+.+++.+++.++|.|++++.|+||++||..+..+.+.+..|+++|++++.++++|+.|++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~  185 (260)
T PRK08416        106 YTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGE  185 (260)
T ss_pred             cCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhh
Confidence            24566778899999999999999999999999998877799999999988888888999999999999999999999987


Q ss_pred             CccceeeeCCCccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~  162 (182)
                      .++.+....|++..|+..
T Consensus       186 ~gi~v~~v~PG~i~T~~~  203 (260)
T PRK08416        186 KNIRVNAVSGGPIDTDAL  203 (260)
T ss_pred             hCeEEEEEeeCcccChhh
Confidence            666777778988888764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2e-24  Score=162.09  Aligned_cols=159  Identities=23%  Similarity=0.288  Sum_probs=139.5

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..++....          ..+.++.++.||++|+++++++++.+.+ ++++|++|||||...+.++.+.+
T Consensus        28 ~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~  107 (265)
T PRK07097         28 KAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMS  107 (265)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCC
Confidence            457778888877754322          2245788999999999999999999998 99999999999998777888889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++.+++.++++|++++.++||++||..+..+.+....|+++|+++..++++++.|+...++.++..
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v  187 (265)
T PRK07097        108 AEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGI  187 (265)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEE
Confidence            99999999999999999999999999988789999999998888888899999999999999999999998776777777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       188 ~Pg~v~t~~~  197 (265)
T PRK07097        188 GPGYIATPQT  197 (265)
T ss_pred             Eeccccccch
Confidence            8988877654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.92  E-value=1.6e-24  Score=164.90  Aligned_cols=135  Identities=13%  Similarity=0.158  Sum_probs=116.6

Q ss_pred             eEEEEccC--CC------------------HHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHH
Q psy5462          27 AVYFKADV--SD------------------KAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus        27 ~~~~~~D~--s~------------------~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n   83 (182)
                      ...+.+|+  ++                  +++++++++.+.+ ||++|+||||||...  ..++.+.+.++|+.++++|
T Consensus        74 ~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN  153 (303)
T PLN02730         74 TKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISAS  153 (303)
T ss_pred             CeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHH
Confidence            56788999  33                  4489999999999 999999999998643  3678889999999999999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC-chhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcccccc
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV-SAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVTIL  161 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~~~  161 (182)
                      +.+++.++++++|+|+++  |+||++||..+..+.+.+ ..|+++|+|+.+|+++|+.|++. .++.++..+|++..|++
T Consensus       154 ~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~  231 (303)
T PLN02730        154 SYSFVSLLQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA  231 (303)
T ss_pred             hHHHHHHHHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence            999999999999999763  899999999988777765 48999999999999999999985 56677777999888877


Q ss_pred             cc
Q psy5462         162 YQ  163 (182)
Q Consensus       162 ~~  163 (182)
                      ..
T Consensus       232 ~~  233 (303)
T PLN02730        232 AK  233 (303)
T ss_pred             hh
Confidence            54

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.92  E-value=2e-24  Score=161.51  Aligned_cols=157  Identities=15%  Similarity=0.116  Sum_probs=129.0

Q ss_pred             cccccccccceeccCCC--C-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCL--P-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.+...++..  .       ..+.++.++.||++|+++++++++.+.+ +|++|++|||||....    .++.
T Consensus        27 ~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~  106 (256)
T PRK07889         27 RVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFL  106 (256)
T ss_pred             HHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcc
Confidence            45677888877765321  0       1233577899999999999999999998 9999999999998643    3567


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.++++|+.++++|+.+++++++.++|+|++  +|+||++++.. ..+.+.+..|+++|+|+.+|+++|+.|+++.++.+
T Consensus       107 ~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrv  183 (256)
T PRK07889        107 DAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRV  183 (256)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            7889999999999999999999999999974  48999998653 44567788899999999999999999999766667


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      +..+|++..|+...
T Consensus       184 n~v~PG~v~T~~~~  197 (256)
T PRK07889        184 NLVAAGPIRTLAAK  197 (256)
T ss_pred             EeeccCcccChhhh
Confidence            77799988887643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-24  Score=160.57  Aligned_cols=160  Identities=20%  Similarity=0.165  Sum_probs=139.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...++...          ..+.++.++.+|++|++++.++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        27 ~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  106 (254)
T PRK08085         27 TGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFP  106 (254)
T ss_pred             HHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCC
Confidence            456777888777664321          2245788899999999999999999988 99999999999987777888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++.+++++.+++++++.++||++||..+..+.+....|+++|++++.++++++.|+++.++.+++.
T Consensus       107 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  186 (254)
T PRK08085        107 EQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGI  186 (254)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEE
Confidence            99999999999999999999999999887779999999998888888889999999999999999999998776677777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       187 ~pG~~~t~~~~  197 (254)
T PRK08085        187 APGYFKTEMTK  197 (254)
T ss_pred             EeCCCCCcchh
Confidence            89988877654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.4e-24  Score=157.53  Aligned_cols=155  Identities=12%  Similarity=-0.033  Sum_probs=130.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cC-CccEEEEcccCCC-CCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IG-YVDILINNAGIVA-SSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~-~id~li~~ag~~~-~~~~~~   70 (182)
                      ++|.++|+.+....+...          ..+.++..+.||++|+++++++++.+.+ ++ ++|++|||||... ..++.+
T Consensus        23 ~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~  102 (227)
T PRK08862         23 CHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDE  102 (227)
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCcccc
Confidence            456778888777653321          2355688899999999999999999998 99 9999999998543 457888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .++++|.+.+++|+.+++.+++.+.|+|++++ +|.||++||..+.   +++..|+++|+++.+|+++++.|+++.++.+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asKaal~~~~~~la~el~~~~Irv  179 (227)
T PRK08862        103 QPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSNALVSGFTHSWAKELTPFNIRV  179 (227)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            89999999999999999999999999998764 6899999997653   4578999999999999999999998766677


Q ss_pred             eeeCCCcccccc
Q psy5462         150 TVTTPLRSVTIL  161 (182)
Q Consensus       150 ~v~~~~~~~~~~  161 (182)
                      ...+|++..+..
T Consensus       180 n~v~PG~i~t~~  191 (227)
T PRK08862        180 GGVVPSIFSANG  191 (227)
T ss_pred             EEEecCcCcCCC
Confidence            777999888773

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2.5e-24  Score=164.09  Aligned_cols=159  Identities=26%  Similarity=0.294  Sum_probs=136.8

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+++...         ..+.++..+.||++|.++++++++.+.+ ++++|++|||||.....++.+.+.
T Consensus        27 ~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~  106 (296)
T PRK05872         27 RRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDP  106 (296)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCH
Confidence            356677887776653221         1135677788999999999999999999 999999999999987788889999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+.++++|+.++++++++++|+|.++ .|+||++||..++.+.+....|+++|++++.|+++++.|++..++.+.+..
T Consensus       107 ~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~  185 (296)
T PRK05872        107 DAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAY  185 (296)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEe
Confidence            9999999999999999999999998775 489999999999988889999999999999999999999987767777788


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|+...
T Consensus       186 Pg~v~T~~~~  195 (296)
T PRK05872        186 LSWIDTDLVR  195 (296)
T ss_pred             cCcccchhhh
Confidence            9888777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.7e-24  Score=163.59  Aligned_cols=160  Identities=18%  Similarity=0.139  Sum_probs=139.6

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++.....    ...+.++.+|++|++++.++++.+.+ + +++|++|||||....+.+.+.+.++++
T Consensus        22 ~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~  101 (277)
T PRK05993         22 RALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALR  101 (277)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHH
Confidence            45677888888776543211    12477899999999999999999877 5 689999999999888888889999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .++++|+.+++.+++.++|.|++++.++||++||..++.+.+....|+++|++++.++++++.|+...++.+.+..|++.
T Consensus       102 ~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v  181 (277)
T PRK05993        102 AQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPI  181 (277)
T ss_pred             HHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence            99999999999999999999998888999999999998888889999999999999999999999987778888899988


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|+...
T Consensus       182 ~T~~~~  187 (277)
T PRK05993        182 ETRFRA  187 (277)
T ss_pred             cCchhh
Confidence            887654

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=3.9e-24  Score=161.73  Aligned_cols=158  Identities=20%  Similarity=0.236  Sum_probs=135.1

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~~~   71 (182)
                      ++|.++|+.+..++....         ..+.++.++++|++|+++++++++.+.+ ++++|+||||||....  ..+.+.
T Consensus        36 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~  115 (280)
T PLN02253         36 RLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNV  115 (280)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccC
Confidence            456778888877753221         1235788999999999999999999999 9999999999998643  457788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++++++++.+.|.+++.|+||+++|..+..+.+....|+++|++++.++++++.|++...+.++.
T Consensus       116 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  195 (280)
T PLN02253        116 ELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNC  195 (280)
T ss_pred             CHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999999999999999999988777999999999988777778899999999999999999999877677777


Q ss_pred             eCCCcccccc
Q psy5462         152 TTPLRSVTIL  161 (182)
Q Consensus       152 ~~~~~~~~~~  161 (182)
                      .+|++..+..
T Consensus       196 i~pg~v~t~~  205 (280)
T PLN02253        196 VSPYAVPTAL  205 (280)
T ss_pred             EeeCcccccc
Confidence            7898877664

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5e-24  Score=159.67  Aligned_cols=157  Identities=21%  Similarity=0.179  Sum_probs=134.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ..+.++.++.||++|++++.++++.+.+ ++++|++|||||......+ +.+.++
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~-~~~~~~  102 (261)
T PRK08265         24 RALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGL-ASSRAD  102 (261)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcC-cCCHHH
Confidence            457778988887765432       1245788999999999999999999999 9999999999997654443 568899


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++.+++++.|+|. ++.|+||++||.++..+.+....|+++|+++..++++++.|++..++.+++.+|+
T Consensus       103 ~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  181 (261)
T PRK08265        103 WLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPG  181 (261)
T ss_pred             HHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccC
Confidence            999999999999999999999997 5579999999999988888899999999999999999999998766666667888


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..|+..
T Consensus       182 ~~~t~~~  188 (261)
T PRK08265        182 WTWSRVM  188 (261)
T ss_pred             CccChhh
Confidence            7777654

>KOG1610|consensus

Probab=99.92  E-value=5.4e-24  Score=157.82  Aligned_cols=162  Identities=20%  Similarity=0.203  Sum_probs=137.6

Q ss_pred             cccccccccceeccCCC------C-CC-CceeEEEEccCCCHHHHHHHHHHHHh-cC--CccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL------P-TK-THVAVYFKADVSDKAEIKKLNENVRK-IG--YVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------~-~~-~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--~id~li~~ag~~~-~~~~~~~   71 (182)
                      +.|.++|+.|......-      . .. .++...++.|++++++++++.+.+.+ .+  .+-.+|||||+.. .++.+-.
T Consensus        47 ~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl  126 (322)
T KOG1610|consen   47 KKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWL  126 (322)
T ss_pred             HHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccc
Confidence            35666677666554111      1 11 67888899999999999999999988 54  5999999999764 5777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.+++.+++++|++|++.++++++|.+++. +||||++||..|..+.|..++|++||+|++.|+.++++|+.+.++.|.+
T Consensus       127 ~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~Vsi  205 (322)
T KOG1610|consen  127 TVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSI  205 (322)
T ss_pred             cHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEE
Confidence            999999999999999999999999988765 6999999999999999999999999999999999999999998889999


Q ss_pred             eCCCcccccccccch
Q psy5462         152 TTPLRSVTILYQRSV  166 (182)
Q Consensus       152 ~~~~~~~~~~~~~~~  166 (182)
                      .-|+.-.|+......
T Consensus       206 iePG~f~T~l~~~~~  220 (322)
T KOG1610|consen  206 IEPGFFKTNLANPEK  220 (322)
T ss_pred             eccCccccccCChHH
Confidence            999987777776433

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.9e-24  Score=159.95  Aligned_cols=157  Identities=17%  Similarity=0.169  Sum_probs=133.6

Q ss_pred             cccccccccceeccCCCC-----------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.+..+++...                 ..+.++.++.||+++++++.++++.+.+ ++++|++|||||....
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~  103 (273)
T PRK08278         24 LRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINL  103 (273)
T ss_pred             HHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCC
Confidence            456778888877765432                 1245788999999999999999999988 9999999999998777


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc--CCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .++.+.+.++|+.++++|+.+++++++++.|+|++++.++||++||..+..+.  ++...|+++|++++.++++++.|+.
T Consensus       104 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~  183 (273)
T PRK08278        104 TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR  183 (273)
T ss_pred             CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhh
Confidence            77888899999999999999999999999999998877899999998777665  7789999999999999999999998


Q ss_pred             CCccceeeeCCC-ccccc
Q psy5462         144 YMLWGTTVTTPL-RSVTI  160 (182)
Q Consensus       144 ~~~~~i~v~~~~-~~~~~  160 (182)
                      ...+.+...+|+ +..+.
T Consensus       184 ~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        184 DDGIAVNALWPRTTIATA  201 (273)
T ss_pred             hcCcEEEEEeCCCccccH
Confidence            765566666776 34554

>PRK05855 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.7e-24  Score=176.17  Aligned_cols=160  Identities=28%  Similarity=0.275  Sum_probs=141.3

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.||++|++++.++++.+.+ +|++|++|||||....+++.+.+
T Consensus       333 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~  412 (582)
T PRK05855        333 LAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTS  412 (582)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCC
Confidence            46778888877766432          22356789999999999999999999988 99999999999998778888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+.++++|+.+++++++++.|+|++++ +|+||++||.+++.+.++...|+++|+++++++++++.|++..++.+++
T Consensus       413 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~  492 (582)
T PRK05855        413 AEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTA  492 (582)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            999999999999999999999999999876 5899999999999988999999999999999999999999977778888


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|+...|++..
T Consensus       493 v~Pg~v~t~~~~  504 (582)
T PRK05855        493 ICPGFVDTNIVA  504 (582)
T ss_pred             EEeCCCcccchh
Confidence            899988886544

>PRK06182 short chain dehydrogenase; Validated

Probab=99.92  E-value=3.2e-24  Score=161.66  Aligned_cols=159  Identities=21%  Similarity=0.205  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.+..+.+....    ...++.++.||++|++++.++++.+.+ ++++|++|||||....+++.+.+.++++.
T Consensus        21 ~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~  100 (273)
T PRK06182         21 RRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARR  100 (273)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHH
Confidence            4567788888877643321    123478899999999999999999988 99999999999998778888899999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      .+++|+.+++.+++.++|.|++++.|+||++||..+..+.+....|+++|+++++++++++.|+...++.+++..|++..
T Consensus       101 ~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  180 (273)
T PRK06182        101 QFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIK  180 (273)
T ss_pred             HHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcc
Confidence            99999999999999999999988889999999988877777788999999999999999999998777788888999888


Q ss_pred             cccc
Q psy5462         159 TILY  162 (182)
Q Consensus       159 ~~~~  162 (182)
                      |+..
T Consensus       181 t~~~  184 (273)
T PRK06182        181 TEWG  184 (273)
T ss_pred             cccc
Confidence            8754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.3e-24  Score=161.56  Aligned_cols=160  Identities=23%  Similarity=0.220  Sum_probs=139.1

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.+....+....      .-.++.++.||++|++++.++++.+.+ ++++|++|||||....+++.+.+.+++
T Consensus        23 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~  102 (273)
T PRK07825         23 RALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVT  102 (273)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHH
Confidence            4567778887766543211      112578899999999999999999999 999999999999987778888899999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +.++++|+.+++.+++.++|.|++++.++||++||.++..+.++...|+++|+++..++++++.|+...++.+.+.+|++
T Consensus       103 ~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~  182 (273)
T PRK07825        103 RRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSF  182 (273)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCc
Confidence            99999999999999999999999988899999999999888899999999999999999999999987777888889988


Q ss_pred             ccccccc
Q psy5462         157 SVTILYQ  163 (182)
Q Consensus       157 ~~~~~~~  163 (182)
                      ..+....
T Consensus       183 v~t~~~~  189 (273)
T PRK07825        183 VNTELIA  189 (273)
T ss_pred             Ccchhhc
Confidence            7776543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.92  E-value=6.2e-24  Score=158.51  Aligned_cols=160  Identities=19%  Similarity=0.183  Sum_probs=139.5

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|....+..          ...+.++.++.+|++|+++++++++.+.+ ++++|++|||+|...+.++.+.+
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~  107 (255)
T PRK07523         28 EGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFP  107 (255)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCC
Confidence            45677888887765432          12345788999999999999999999998 99999999999998778888889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++++++++.++|.+++.++||++||..+..+.++...|+++|++++.++++++.|++..++.+++.
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i  187 (255)
T PRK07523        108 ADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAI  187 (255)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEE
Confidence            99999999999999999999999999887789999999998888888899999999999999999999998766777777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       188 ~pg~~~t~~~~  198 (255)
T PRK07523        188 APGYFDTPLNA  198 (255)
T ss_pred             EECcccCchhh
Confidence            88887777644

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.7e-24  Score=165.65  Aligned_cols=159  Identities=19%  Similarity=0.190  Sum_probs=137.0

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.+|++|+++++++++.+.+ +|++|++|||||....+++.+.+
T Consensus        26 ~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~  105 (334)
T PRK07109         26 RAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVT  105 (334)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCC
Confidence            45677888887766432          22356788999999999999999999999 99999999999987777788899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC--cccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM--LWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~~~i~  150 (182)
                      .++++..+++|+.+++++++.++++|++++.|+||++||..++.+.+....|+++|+++..|+++++.|+...  .+.+.
T Consensus       106 ~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~  185 (334)
T PRK07109        106 PEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVT  185 (334)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            9999999999999999999999999998878999999999999888889999999999999999999998743  34556


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      +.+|+...|+..
T Consensus       186 ~v~Pg~v~T~~~  197 (334)
T PRK07109        186 MVQPPAVNTPQF  197 (334)
T ss_pred             EEeCCCccCchh
Confidence            667887776644

>KOG0725|consensus

Probab=99.92  E-value=7.6e-24  Score=158.69  Aligned_cols=158  Identities=23%  Similarity=0.212  Sum_probs=134.3

Q ss_pred             cccccccccceeccCCCC-------------CCCceeEEEEccCCCHHHHHHHHHHHHh--cCCccEEEEcccCCCCC-C
Q psy5462           4 DRTTGHIHGILFIPWCLP-------------TKTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASS-S   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~id~li~~ag~~~~~-~   67 (182)
                      ++|.+.|+.+.+..+...             ..+.++..+.||++++++++++++.+.+  +|+||++|||||..... +
T Consensus        26 ~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~  105 (270)
T KOG0725|consen   26 LLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGS  105 (270)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCC
Confidence            567788888888875433             1246799999999999999999988777  68999999999998864 7


Q ss_pred             cccCCHHHHHHHHHHHhH-HHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC-chhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          68 VLAHTDHEIERIMDVNLM-SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV-SAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      +.+.+.++|+..+++|+. +.+.+.+.+.+++.++++|.|+++||.++..+.++. ..|+++|+|++.|+|++|.||++.
T Consensus       106 ~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~  185 (270)
T KOG0725|consen  106 ILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKH  185 (270)
T ss_pred             hhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Confidence            899999999999999999 477777888888777788999999999988765555 799999999999999999999987


Q ss_pred             ccceeeeCCCcccccc
Q psy5462         146 LWGTTVTTPLRSVTIL  161 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~  161 (182)
                      .+.++..+|+...|+.
T Consensus       186 gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  186 GIRVNSVSPGLVKTSL  201 (270)
T ss_pred             CcEEEEeecCcEeCCc
Confidence            6666666888888876

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=8.4e-24  Score=157.12  Aligned_cols=159  Identities=23%  Similarity=0.232  Sum_probs=138.0

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+.+..        ...+.++.++.+|+++++++.++++.+.+ ++++|++|||||...+.++.+.+.+
T Consensus        23 ~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~  102 (248)
T TIGR01832        23 VGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEK  102 (248)
T ss_pred             HHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence            45777888887776432        12245788999999999999999999988 8999999999999877777888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      +|+.++++|+.+++.+++++.++|.+++ .++||++||..++.+.+....|+++|++++.++++++.|+.+.++.+.+.+
T Consensus       103 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~  182 (248)
T TIGR01832       103 DWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIA  182 (248)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEE
Confidence            9999999999999999999999998765 689999999988888888899999999999999999999987777778889


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..++..
T Consensus       183 pg~v~t~~~  191 (248)
T TIGR01832       183 PGYMATNNT  191 (248)
T ss_pred             ECcCcCcch
Confidence            998877754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=156.73  Aligned_cols=158  Identities=20%  Similarity=0.173  Sum_probs=136.6

Q ss_pred             cccccccccceeccCCCC--CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP--TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.+..+++...  ..+.++.++.+|++++++++++++.+.+ ++++|++|||||......+.+.+.++|+..+
T Consensus        24 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~  103 (252)
T PRK07856         24 RAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIV  103 (252)
T ss_pred             HHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHH
Confidence            456778888887765442  2355788999999999999999999999 9999999999998777777888999999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      ++|+.+++.+++++.+.|.++ +.++||++||..+..+.+....|+++|++++.|+++++.|+++. +.+....|++..+
T Consensus       104 ~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t  182 (252)
T PRK07856        104 ELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRT  182 (252)
T ss_pred             HHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccC
Confidence            999999999999999999875 45899999999998888899999999999999999999999865 6666668888777


Q ss_pred             ccc
Q psy5462         160 ILY  162 (182)
Q Consensus       160 ~~~  162 (182)
                      +..
T Consensus       183 ~~~  185 (252)
T PRK07856        183 EQS  185 (252)
T ss_pred             hHH
Confidence            654

>PRK07985 oxidoreductase; Provisional

Probab=99.92  E-value=1e-23  Score=160.58  Aligned_cols=157  Identities=17%  Similarity=0.156  Sum_probs=133.8

Q ss_pred             cccccccccceeccCCC------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~   69 (182)
                      ++|.++|+.+.......            ...+.++.++.||++|++++.++++.+.+ ++++|++|||||... ..++.
T Consensus        67 ~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~  146 (294)
T PRK07985         67 IAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIA  146 (294)
T ss_pred             HHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChh
Confidence            45677888877654211            12245688899999999999999999988 999999999999753 35677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+.++++|+.+++.+++++.|+|.+  .++||++||..++.+.+....|+++|++++.++++++.|++..++.+
T Consensus       147 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrv  224 (294)
T PRK07985        147 DLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV  224 (294)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEE
Confidence            8899999999999999999999999999864  48999999999988888889999999999999999999998766777


Q ss_pred             eeeCCCccccccc
Q psy5462         150 TVTTPLRSVTILY  162 (182)
Q Consensus       150 ~v~~~~~~~~~~~  162 (182)
                      .+..|++..++..
T Consensus       225 n~i~PG~v~t~~~  237 (294)
T PRK07985        225 NIVAPGPIWTALQ  237 (294)
T ss_pred             EEEECCcCccccc
Confidence            7779998888764

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.92  E-value=2e-23  Score=156.46  Aligned_cols=160  Identities=21%  Similarity=0.223  Sum_probs=137.0

Q ss_pred             cccccccccceeccCCCC----------C-CC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+.+.++...          . .+ .++.++++|++++++++++++.+.+ +|++|++|||||.....++.+
T Consensus        36 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  115 (262)
T PRK07831         36 RRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVD  115 (262)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence            456677888776653221          1 12 4688999999999999999999988 999999999999877777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.++|+..+++|+.+++.+++++.|.|++++ .|+||+++|..+..+.++...|+++|+++++++++++.|++...+.+
T Consensus       116 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v  195 (262)
T PRK07831        116 MTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRI  195 (262)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            89999999999999999999999999998876 78999999998888888899999999999999999999998776677


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ....|++..++...
T Consensus       196 ~~i~Pg~~~t~~~~  209 (262)
T PRK07831        196 NAVAPSIAMHPFLA  209 (262)
T ss_pred             EEEeeCCccCcccc
Confidence            77788888877654

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.3e-23  Score=157.08  Aligned_cols=159  Identities=20%  Similarity=0.227  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.+..+.+.... .+.++.++.||++|+++++++++.+.+ ++++|++|||||...  ..++.+.+.++|+..
T Consensus        27 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~  106 (260)
T PRK06523         27 ARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDE  106 (260)
T ss_pred             HHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHH
Confidence            4567788888877754432 345688999999999999999999988 999999999999653  355777889999999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-CCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      +++|+.+++.++++++++|++++.++||++||..+..+.+ ....|+++|++++.++++++.+++..++.+.+..|++..
T Consensus       107 ~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~  186 (260)
T PRK06523        107 LNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIE  186 (260)
T ss_pred             HhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence            9999999999999999999987779999999998877754 789999999999999999999998776777777999887


Q ss_pred             cccc
Q psy5462         159 TILY  162 (182)
Q Consensus       159 ~~~~  162 (182)
                      ++..
T Consensus       187 t~~~  190 (260)
T PRK06523        187 TEAA  190 (260)
T ss_pred             CccH
Confidence            7754

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-23  Score=158.45  Aligned_cols=159  Identities=22%  Similarity=0.245  Sum_probs=139.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+.+...       ..+.++..+.+|++|++++.++++.+.+ ++++|++|||||....+++.+.+.++
T Consensus        22 ~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~  101 (277)
T PRK06180         22 QAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAE  101 (277)
T ss_pred             HHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHH
Confidence            456778988888775322       1245788999999999999999999988 99999999999988777788889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.++++++++++|+|++++.++||++||.++..+.++...|+++|++++.++++++.|++..+.++.+..|+
T Consensus       102 ~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg  181 (277)
T PRK06180        102 MRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPG  181 (277)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecC
Confidence            99999999999999999999999988788999999999888888999999999999999999999998767788888998


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..++..
T Consensus       182 ~v~t~~~  188 (277)
T PRK06180        182 SFRTDWA  188 (277)
T ss_pred             CcccCcc
Confidence            8766543

>PRK09242 tropinone reductase; Provisional

Probab=99.92  E-value=8.7e-24  Score=157.91  Aligned_cols=160  Identities=21%  Similarity=0.181  Sum_probs=138.0

Q ss_pred             cccccccccceeccCCCC----------CC--CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TK--THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~--~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+.+...          ..  +.++.++.||+++++++.++++.+.+ ++++|++|||+|.....++.+
T Consensus        27 ~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  106 (257)
T PRK09242         27 REFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAID  106 (257)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence            456677888776653321          11  45788999999999999999999998 999999999999876667778


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.+++.+++++.|+|++++.++||++||..+..+.+..+.|+++|+++..++++++.|+...++.+.
T Consensus       107 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  186 (257)
T PRK09242        107 YTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVN  186 (257)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence            89999999999999999999999999998877899999999998888888899999999999999999999987666777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ...|++..++...
T Consensus       187 ~i~Pg~i~t~~~~  199 (257)
T PRK09242        187 AVAPWYIRTPLTS  199 (257)
T ss_pred             EEEECCCCCcccc
Confidence            7788888777654

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.7e-24  Score=157.78  Aligned_cols=158  Identities=19%  Similarity=0.170  Sum_probs=132.1

Q ss_pred             cccccccccceeccC-C----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-c----C--CccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPW-C----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-I----G--YVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~----~--~id~li~~ag~~~~   65 (182)
                      ++|.+.|+.+..... .          +...+.++..+.+|+++.+++..+++.+.+ +    +  ++|++|||||....
T Consensus        22 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~  101 (252)
T PRK12747         22 KRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG  101 (252)
T ss_pred             HHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCC
Confidence            457778888766531 1          112345678899999999999998887754 2    4  79999999998766


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      .++.+.+.++|+.++++|+.+++.++++++|.|++  .|+||++||.++..+.+....|+++|+++.+++++++.|++..
T Consensus       102 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~  179 (252)
T PRK12747        102 AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGAR  179 (252)
T ss_pred             CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhHc
Confidence            67888899999999999999999999999999865  4899999999998888889999999999999999999999877


Q ss_pred             ccceeeeCCCcccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~  163 (182)
                      ++.+++..|++..++...
T Consensus       180 girvn~v~Pg~v~t~~~~  197 (252)
T PRK12747        180 GITVNAILPGFIKTDMNA  197 (252)
T ss_pred             CCEEEEEecCCccCchhh
Confidence            677777799988877643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.92  E-value=9.6e-24  Score=157.92  Aligned_cols=159  Identities=16%  Similarity=0.067  Sum_probs=133.0

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~   71 (182)
                      ++|.++|+.+...++....         ..+++.++.||++|+++++++++.+.+ ++++|++|||||...  +.++.+.
T Consensus        18 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~   97 (259)
T PRK08340         18 RELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEA   97 (259)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccc
Confidence            4567788887776643211         123688999999999999999999988 999999999999754  3456778


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHh-CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|...+++|+.+++.+++.++|.|.+ ++.|+||++||.++..+.+....|+++|+++.+|+++++.|+++.++.+.
T Consensus        98 ~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~  177 (259)
T PRK08340         98 GYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAY  177 (259)
T ss_pred             cHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence            88999999999999999999999998874 45789999999998888888999999999999999999999987655666


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      ..+|++..|+..
T Consensus       178 ~v~pG~v~t~~~  189 (259)
T PRK08340        178 TVLLGSFDTPGA  189 (259)
T ss_pred             EeccCcccCccH
Confidence            668888777754

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.4e-24  Score=157.90  Aligned_cols=161  Identities=25%  Similarity=0.228  Sum_probs=138.5

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~   71 (182)
                      ++|.++|+.+..+++..          ...+.++.++.+|++|.+++.++++.+.+ ++++|++|||+|.... .++.+.
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~  104 (253)
T PRK06172         25 LAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEG  104 (253)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhC
Confidence            45677888877776432          12345788999999999999999999988 9999999999998654 447788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.++++++|+|.+++.++||++||..+..+.+....|+++|++++.++++++.|+...++.+.+
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~  184 (253)
T PRK06172        105 SEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNA  184 (253)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999988777999999999998888899999999999999999999999876667777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      ..|++..|+....
T Consensus       185 i~PG~v~t~~~~~  197 (253)
T PRK06172        185 VCPAVIDTDMFRR  197 (253)
T ss_pred             EEeCCccChhhhh
Confidence            7898888877554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.91  E-value=9.6e-24  Score=159.41  Aligned_cols=159  Identities=23%  Similarity=0.254  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-------
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-------   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-------   65 (182)
                      ++|.++|+.+..+.+..          ...+.++.+++||++|++++..+++.+.+ ++++|++|||||...+       
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~  107 (278)
T PRK08277         28 KELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNE  107 (278)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccc
Confidence            45677888887776432          12345788999999999999999999988 9999999999996533       


Q ss_pred             --------CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHH
Q psy5462          66 --------SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        66 --------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~  137 (182)
                              .++.+.+.++|+..+++|+.+++.+++++++.|++++.++||++||..++.+.++...|+++|++++.++++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~  187 (278)
T PRK08277        108 FHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQW  187 (278)
T ss_pred             cccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHH
Confidence                    245678899999999999999999999999999988789999999999998888999999999999999999


Q ss_pred             HHhhhCCCccceeeeCCCccccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      ++.|++...+.+.+..|++..++..
T Consensus       188 la~e~~~~girvn~v~Pg~v~t~~~  212 (278)
T PRK08277        188 LAVHFAKVGIRVNAIAPGFFLTEQN  212 (278)
T ss_pred             HHHHhCccCeEEEEEEeccCcCcch
Confidence            9999987666777778888777753

>PRK08643 acetoin reductase; Validated

Probab=99.91  E-value=1.1e-23  Score=157.21  Aligned_cols=160  Identities=16%  Similarity=0.201  Sum_probs=137.7

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.+|+++++++.++++.+.+ ++++|++|||||.....++.+.+
T Consensus        20 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   99 (256)
T PRK08643         20 KRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETIT   99 (256)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            45677888877765432          12345788999999999999999999998 99999999999987777788889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+.++++|+.+++.+++.+.+.|++.+ .++||++||..+..+.++...|+++|++++.+++.++.|+.+.++.+..
T Consensus       100 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  179 (256)
T PRK08643        100 EEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNA  179 (256)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            999999999999999999999999998764 5899999999988888889999999999999999999999877677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..++...
T Consensus       180 i~Pg~v~t~~~~  191 (256)
T PRK08643        180 YAPGIVKTPMMF  191 (256)
T ss_pred             EeeCCCcChhhh
Confidence            799888776643

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-23  Score=157.85  Aligned_cols=160  Identities=23%  Similarity=0.257  Sum_probs=140.5

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...+...          ...+.++.++.||++|++++..+++.+.+ ++++|++|||||....+.+.+.+
T Consensus        18 ~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~   97 (270)
T PRK05650         18 LRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELS   97 (270)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            35667788877665322          23356788999999999999999999998 89999999999998877888889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++.+++.++|.|++.+.++||++||..+..+.+....|+++|+++++++++++.|+...++.+.+.
T Consensus        98 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v  177 (270)
T PRK05650         98 LEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVV  177 (270)
T ss_pred             HHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            99999999999999999999999999887779999999999988888999999999999999999999998777788888


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       178 ~Pg~v~t~~~~  188 (270)
T PRK05650        178 CPSFFQTNLLD  188 (270)
T ss_pred             ecCccccCccc
Confidence            99988887654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=1.7e-23  Score=155.74  Aligned_cols=159  Identities=21%  Similarity=0.214  Sum_probs=139.8

Q ss_pred             cccccccccceeccCCC-CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+.+..++... ...+.++.++++|++|++++.++++.+.+ ++++|++|||+|....+++.+.+.++++..++
T Consensus        26 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~  105 (252)
T PRK08220         26 LAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFA  105 (252)
T ss_pred             HHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence            45677888888887554 33466789999999999999999999999 99999999999987777788889999999999


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +|+.+++.+++++.++|++++.++||++||..+..+.++...|+++|++++.++++++.|+...++.+.+..|++..++.
T Consensus       106 ~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  185 (252)
T PRK08220        106 VNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM  185 (252)
T ss_pred             HhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence            99999999999999999888789999999998888888889999999999999999999998766667777888877765


Q ss_pred             c
Q psy5462         162 Y  162 (182)
Q Consensus       162 ~  162 (182)
                      .
T Consensus       186 ~  186 (252)
T PRK08220        186 Q  186 (252)
T ss_pred             h
Confidence            4

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.91  E-value=1.2e-23  Score=157.51  Aligned_cols=160  Identities=20%  Similarity=0.168  Sum_probs=137.4

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.+.....           ...+.++.++.+|++|.+++.++++.+.+ ++++|++|||||...+.++.+.
T Consensus        25 ~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~  104 (261)
T PRK08936         25 VRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEM  104 (261)
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            45677888776654321           12356788999999999999999999988 9999999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++.+++.++++|.+++ .|+||++||..+..+.++...|+++|+|+..++++++.|+....+.+.
T Consensus       105 ~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  184 (261)
T PRK08936        105 SLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN  184 (261)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            9999999999999999999999999998765 589999999988888888999999999999999999999987767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       185 ~v~pg~v~t~~~~  197 (261)
T PRK08936        185 NIGPGAINTPINA  197 (261)
T ss_pred             EEEECcCCCCccc
Confidence            7788888777643

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.91  E-value=1e-23  Score=155.72  Aligned_cols=156  Identities=13%  Similarity=0.041  Sum_probs=130.3

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+..+++.....     ...+.++.+|++|+++++++++.+.+ ++++|++|||||........+.+.++|+
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~   99 (236)
T PRK06483         20 WHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLA   99 (236)
T ss_pred             HHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHH
Confidence            45677888888776543211     11367899999999999999999998 9999999999998655556677899999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      .++++|+.+++.+++.+.+.|++.+  .++||++||..+..+.+....|+++|+++++|+++++.|+++. +.++...|+
T Consensus       100 ~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~~-irvn~v~Pg  178 (236)
T PRK06483        100 RMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAPE-VKVNSIAPA  178 (236)
T ss_pred             HHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCCC-cEEEEEccC
Confidence            9999999999999999999998765  6899999999888888889999999999999999999999863 566666787


Q ss_pred             ccccc
Q psy5462         156 RSVTI  160 (182)
Q Consensus       156 ~~~~~  160 (182)
                      +..+.
T Consensus       179 ~~~~~  183 (236)
T PRK06483        179 LILFN  183 (236)
T ss_pred             ceecC
Confidence            76543

>PRK12743 oxidoreductase; Provisional

Probab=99.91  E-value=2.6e-23  Score=155.35  Aligned_cols=159  Identities=19%  Similarity=0.118  Sum_probs=136.8

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+...-           ...+.++.++.||++|+++++++++.+.+ ++++|++|||+|......+.+.
T Consensus        20 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   99 (256)
T PRK12743         20 LLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDM   99 (256)
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            45677888887653211           12356789999999999999999999999 9999999999998777777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.+++.+++++.++|.+++ .|+||++||..+..+.++...|+++|+++..++++++.++...++.++
T Consensus       100 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~  179 (256)
T PRK12743        100 DFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVN  179 (256)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            9999999999999999999999999997654 589999999988888888999999999999999999999987666777


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      ...|++..++..
T Consensus       180 ~v~Pg~~~t~~~  191 (256)
T PRK12743        180 AVAPGAIATPMN  191 (256)
T ss_pred             EEEeCCccCccc
Confidence            778988877654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-23  Score=155.45  Aligned_cols=158  Identities=20%  Similarity=0.202  Sum_probs=133.6

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc-ccC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV-LAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~-~~~   71 (182)
                      ++|.++|+.+..+++.          +...+ ++.++.||++|++++.++++.+.+ ++++|++|||+|....... .+.
T Consensus        20 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~   98 (257)
T PRK07024         20 REYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEERE   98 (257)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccC
Confidence            3566778877766532          11122 788999999999999999999988 9999999999998654333 336


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++.++++++.|+....+.+.+
T Consensus        99 ~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~  178 (257)
T PRK07024         99 DLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVT  178 (257)
T ss_pred             CHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence            88999999999999999999999999988888999999999999888999999999999999999999999877778888


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|+...++..
T Consensus       179 v~Pg~v~t~~~  189 (257)
T PRK07024        179 IAPGYIRTPMT  189 (257)
T ss_pred             EecCCCcCchh
Confidence            88988777643

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.1e-23  Score=156.88  Aligned_cols=156  Identities=17%  Similarity=0.135  Sum_probs=131.4

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...++...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        19 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~   98 (252)
T PRK07677         19 KRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLS   98 (252)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCC
Confidence            456778887766653221          1245788999999999999999999998 99999999999976666778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC-Ccccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY-MLWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~~~i~  150 (182)
                      .++|+.++++|+.++++++++++++|.+++ .|+||++||..+..+.+....|+++|+++..|+++|+.|+.. .++.+.
T Consensus        99 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~  178 (252)
T PRK07677         99 VNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN  178 (252)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEE
Confidence            999999999999999999999999987643 689999999998888788899999999999999999999874 455666


Q ss_pred             eeCCCcccc
Q psy5462         151 VTTPLRSVT  159 (182)
Q Consensus       151 v~~~~~~~~  159 (182)
                      ...|++..+
T Consensus       179 ~v~PG~v~~  187 (252)
T PRK07677        179 AIAPGPIER  187 (252)
T ss_pred             EEeeccccc
Confidence            667887764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.7e-23  Score=156.23  Aligned_cols=158  Identities=18%  Similarity=0.169  Sum_probs=135.5

Q ss_pred             cccccccccceeccCC---------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEccc
Q psy5462           4 DRTTGHIHGILFIPWC---------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAG   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag   61 (182)
                      ++|.++|+.+..+.+.                     +...+.+++++.+|+++++++.++++.+.+ ++++|++|||||
T Consensus        25 ~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag  104 (256)
T PRK12748         25 RRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAA  104 (256)
T ss_pred             HHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            4566778877776543                     112245789999999999999999999999 999999999999


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          62 IVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      .....++.+.+.++++..+++|+.+++.+++++.+.|.+++.++||++||..+..+.++...|+++|++++.++++++.|
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  184 (256)
T PRK12748        105 YSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPE  184 (256)
T ss_pred             cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            87777788889999999999999999999999999998777789999999988888788899999999999999999999


Q ss_pred             hCCCccceeeeCCCcccccc
Q psy5462         142 SGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       142 ~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +....+.+....|++..+..
T Consensus       185 ~~~~~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        185 LAEKGITVNAVNPGPTDTGW  204 (256)
T ss_pred             HHHhCeEEEEEEeCcccCCC
Confidence            98666667777888776654

>PRK05599 hypothetical protein; Provisional

Probab=99.91  E-value=2.8e-23  Score=154.37  Aligned_cols=157  Identities=13%  Similarity=0.124  Sum_probs=130.0

Q ss_pred             ccccccccceeccCCC----------CCCC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           5 RTTGHIHGILFIPWCL----------PTKT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~----------~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      +|. +|+.+..+.+..          .+.+ .++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+
T Consensus        19 ~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~   97 (246)
T PRK05599         19 LLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETD   97 (246)
T ss_pred             HHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcC
Confidence            344 477766665322          1223 3578899999999999999999999 99999999999987655555667


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .+++..++++|+.+++.+++.+.|.|.+++ +|+||++||.++..+.+....|+++|+|+.+|+++++.|++..++.+..
T Consensus        98 ~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~  177 (246)
T PRK05599         98 EAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLII  177 (246)
T ss_pred             cHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            788889999999999999999999998764 6999999999998888889999999999999999999999866555666


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..|...
T Consensus       178 v~PG~v~T~~~  188 (246)
T PRK05599        178 ARPGFVIGSMT  188 (246)
T ss_pred             ecCCcccchhh
Confidence            68998877754

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-23  Score=158.09  Aligned_cols=159  Identities=21%  Similarity=0.223  Sum_probs=139.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+.+...       ..+.++.++++|++|++++.++++.+.+ ++++|++|||||....+++.+.+.++
T Consensus        21 ~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~  100 (275)
T PRK08263         21 EAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESE  100 (275)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHH
Confidence            346677888777664321       1245688899999999999999999988 99999999999998888888899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++.++++++.+++..++.+++..|+
T Consensus       101 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg  180 (275)
T PRK08263        101 ARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPG  180 (275)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecC
Confidence            99999999999999999999999887788999999999888888899999999999999999999988777788888998


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..+...
T Consensus       181 ~~~t~~~  187 (275)
T PRK08263        181 GYSTDWA  187 (275)
T ss_pred             CccCCcc
Confidence            8777655

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=155.84  Aligned_cols=155  Identities=19%  Similarity=0.167  Sum_probs=132.9

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC---------cccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS---------VLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~---------~~~~~   72 (182)
                      ++|.++|+.+..++..... ...++.++.+|++|+++++++++.+.+ ++++|++|||||...+..         +.+.+
T Consensus        27 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~  106 (266)
T PRK06171         27 KELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELN  106 (266)
T ss_pred             HHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCC
Confidence            4577889988887654432 234688999999999999999999999 999999999999754322         34578


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++.+++++.++|.+++.++||++||..+..+.+....|+++|++++.|+++++.|++..++.+++.
T Consensus       107 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v  186 (266)
T PRK06171        107 EAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGV  186 (266)
T ss_pred             HHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            99999999999999999999999999887789999999999988888899999999999999999999998766666777


Q ss_pred             CCCccc
Q psy5462         153 TPLRSV  158 (182)
Q Consensus       153 ~~~~~~  158 (182)
                      +|++..
T Consensus       187 ~pG~~~  192 (266)
T PRK06171        187 APGILE  192 (266)
T ss_pred             eccccc
Confidence            888764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-23  Score=155.75  Aligned_cols=160  Identities=19%  Similarity=0.210  Sum_probs=138.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..++....       ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~  103 (257)
T PRK07067         24 ERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDS  103 (257)
T ss_pred             HHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHH
Confidence            467788888887764432       1234688999999999999999999999 99999999999987777788889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.+++.+++++.++|.+++ +++||++||..+..+.++...|+++|++++.++++++.|+...++.+....|
T Consensus       104 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~p  183 (257)
T PRK07067        104 YDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAP  183 (257)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence            999999999999999999999987754 4799999998888888899999999999999999999999877677777788


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..++.++
T Consensus       184 g~v~t~~~~  192 (257)
T PRK07067        184 GVVDTPMWD  192 (257)
T ss_pred             Ccccchhhh
Confidence            888776644

>PRK06128 oxidoreductase; Provisional

Probab=99.91  E-value=9.5e-24  Score=161.18  Aligned_cols=158  Identities=17%  Similarity=0.158  Sum_probs=133.7

Q ss_pred             cccccccccceeccCC------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcc
Q psy5462           4 DRTTGHIHGILFIPWC------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~   69 (182)
                      ++|.++|+.+.+....            +...+.++.++.||++|+++++++++.+.+ ++++|++|||||... ..++.
T Consensus        73 ~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~  152 (300)
T PRK06128         73 IAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIA  152 (300)
T ss_pred             HHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChh
Confidence            4566778877654321            112356788999999999999999999999 999999999999764 35678


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+.++++|+.++++++++++|+|.+  +++||++||..++.+.+....|+++|++++.|+++++.|+...++.+
T Consensus       153 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v  230 (300)
T PRK06128        153 DITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRV  230 (300)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            8899999999999999999999999998864  47999999999988888899999999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      .+..|++..++...
T Consensus       231 ~~v~PG~i~t~~~~  244 (300)
T PRK06128        231 NAVAPGPVWTPLQP  244 (300)
T ss_pred             EEEEECcCcCCCcc
Confidence            77789988887643

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.5e-23  Score=155.00  Aligned_cols=160  Identities=18%  Similarity=0.138  Sum_probs=137.6

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.+..+++...          ..+.++.++.||+++.++++.+++.+.+ ++++|++|||||... ..++.+.
T Consensus        26 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~  105 (252)
T PRK07035         26 KLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDT  105 (252)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccC
Confidence            456778888877764321          2345688899999999999999999999 999999999998754 3566778


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++.++++++++|++++.++||++||..+..+.++.+.|+++|++++.++++++.|+...++.+..
T Consensus       106 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~  185 (252)
T PRK07035        106 DLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNA  185 (252)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEE
Confidence            99999999999999999999999999988778999999999988888899999999999999999999999877777777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|+...|+...
T Consensus       186 i~PG~v~t~~~~  197 (252)
T PRK07035        186 LLPGLTDTKFAS  197 (252)
T ss_pred             EeeccccCcccc
Confidence            789888776643

>PRK06484 short chain dehydrogenase; Validated

Probab=99.91  E-value=8.8e-24  Score=172.32  Aligned_cols=158  Identities=27%  Similarity=0.278  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++...       ..+.++..+.+|++|++++.++++.+.+ +|++|++|||||... ..++.+.+.+
T Consensus       287 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~  366 (520)
T PRK06484        287 DRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAE  366 (520)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHH
Confidence            467788888887765321       2345778899999999999999999998 999999999999864 3567788999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.++++|+.++++++++++|+|  ++.|+||++||.++..+.++...|+++|+++++|+++++.|+.+.++.+...+|
T Consensus       367 ~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  444 (520)
T PRK06484        367 DFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP  444 (520)
T ss_pred             HHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            999999999999999999999999  345899999999999998999999999999999999999999877677777789


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..|++..
T Consensus       445 G~v~t~~~~  453 (520)
T PRK06484        445 GYIETPAVL  453 (520)
T ss_pred             CCccCchhh
Confidence            988877643

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=2.6e-23  Score=154.55  Aligned_cols=159  Identities=16%  Similarity=0.099  Sum_probs=135.8

Q ss_pred             cccccccccceec-cC----------CCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFI-PW----------CLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~~----------~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+ .+          .+...+.++.++.||++|++++.++++.+.+ ++++|++|||+|.....++.+.
T Consensus        22 ~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  101 (250)
T PRK08063         22 LRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMEL  101 (250)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            5677788887653 21          1122356788999999999999999999999 9999999999998777788888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++.+++++.++|.+++.++||++||..+..+.++...|+++|++++.++++++.++....+.+++
T Consensus       102 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~  181 (250)
T PRK08063        102 EESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNA  181 (250)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEe
Confidence            99999999999999999999999999998888999999998887787888999999999999999999998866666777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..++..
T Consensus       182 i~pg~v~t~~~  192 (250)
T PRK08063        182 VSGGAVDTDAL  192 (250)
T ss_pred             EecCcccCchh
Confidence            78887766553

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.91  E-value=3.3e-23  Score=154.95  Aligned_cols=156  Identities=22%  Similarity=0.223  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCC---------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL---------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..         ...+.++.++.||++|++++.++++.+.+ ++++|++|||||... ..++.+.+
T Consensus        26 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~  105 (260)
T PRK12823         26 LRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYE  105 (260)
T ss_pred             HHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCC
Confidence            45777888887776431         12245788999999999999999999998 999999999998653 46778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++++++.++|+|++++.++||++||..+..  +....|+++|++++.|+++++.|++..++.+...
T Consensus       106 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  183 (260)
T PRK12823        106 EEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFEYAEHGIRVNAV  183 (260)
T ss_pred             hHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            99999999999999999999999999988778999999987642  3457899999999999999999998766677777


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      .|++..++.
T Consensus       184 ~Pg~v~t~~  192 (260)
T PRK12823        184 APGGTEAPP  192 (260)
T ss_pred             ecCccCCcc
Confidence            888887753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.91  E-value=3.7e-23  Score=153.56  Aligned_cols=160  Identities=26%  Similarity=0.255  Sum_probs=136.8

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+...           +...+.++.++.||++|++++.++++.+.+ ++++|++|||||...+..+.+.
T Consensus        24 ~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  103 (247)
T PRK12935         24 VALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL  103 (247)
T ss_pred             HHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            4566778887654321           112345789999999999999999999999 9999999999999877777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.+.++..+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++++.++++++.++...++.+.+
T Consensus       104 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  183 (247)
T PRK12935        104 NREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNA  183 (247)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence            89999999999999999999999999988777899999999888888889999999999999999999999766677788


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       184 v~pg~v~t~~~~  195 (247)
T PRK12935        184 ICPGFIDTEMVA  195 (247)
T ss_pred             EEeCCCcChhhh
Confidence            888887765543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.91  E-value=3.8e-23  Score=153.40  Aligned_cols=160  Identities=19%  Similarity=0.181  Sum_probs=137.3

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+......           +...+.++..+.||++|.+++.++++.+.+ ++++|++|||||.....++.+.
T Consensus        21 ~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~  100 (246)
T PRK12938         21 QRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKM  100 (246)
T ss_pred             HHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence            4667788887664311           112355788899999999999999999988 9999999999998776778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.+++++.+.|.+++.++||++||..+..+.++...|+++|++++.++++++.++....+.++.
T Consensus       101 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~  180 (246)
T PRK12938        101 TREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT  180 (246)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            99999999999999999999999999988777899999999888888889999999999999999999999876677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       181 i~pg~~~t~~~~  192 (246)
T PRK12938        181 VSPGYIGTDMVK  192 (246)
T ss_pred             EEecccCCchhh
Confidence            788888776643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=8.4e-24  Score=160.85  Aligned_cols=122  Identities=16%  Similarity=0.192  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc
Q psy5462          39 EIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL  115 (182)
Q Consensus        39 ~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~  115 (182)
                      +++++++.+.+ ||++|+||||||...  ..++.+.+.++|+.++++|+.++++++++++|+|++  .|+||+++|..+.
T Consensus       105 si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~--~G~ii~iss~~~~  182 (299)
T PRK06300        105 TISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP--GGSTISLTYLASM  182 (299)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCeEEEEeehhhc
Confidence            58999999999 999999999998754  467889999999999999999999999999999975  4789999999888


Q ss_pred             cccCCCc-hhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCccccccc
Q psy5462         116 TAAVNVS-AYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       116 ~~~~~~~-~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~~~~  162 (182)
                      .+.+... .|+++|+|+.+|+++|+.|++. .++.++..+|++..|+..
T Consensus       183 ~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~  231 (299)
T PRK06300        183 RAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAG  231 (299)
T ss_pred             CcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhh
Confidence            7777765 8999999999999999999985 356667778888877764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.91  E-value=3.7e-23  Score=154.38  Aligned_cols=159  Identities=20%  Similarity=0.205  Sum_probs=134.3

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..++....          ..+.++.++.+|++|.+++.++++.+.+ ++++|++|||||...+.++ +.+
T Consensus        29 ~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~  107 (255)
T PRK06113         29 ITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMP  107 (255)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCC
Confidence            456777887776653321          2245788999999999999999999988 9999999999998765555 578


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++++++++.|+|.+.+.++||++||..+..+.++...|+++|++++.++++++.++.+.++.+++.
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v  187 (255)
T PRK06113        108 MADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI  187 (255)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            89999999999999999999999999877778999999999988888899999999999999999999998665666666


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..|+...
T Consensus       188 ~pg~~~t~~~~  198 (255)
T PRK06113        188 APGAILTDALK  198 (255)
T ss_pred             ecccccccccc
Confidence            88887776543

>PRK06194 hypothetical protein; Provisional

Probab=99.91  E-value=2.6e-23  Score=157.64  Aligned_cols=159  Identities=26%  Similarity=0.265  Sum_probs=133.9

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..++...          ...+.++.++.+|++|.+++.++++.+.+ ++++|++|||||....+++.+.+
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~  103 (287)
T PRK06194         24 RIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENS  103 (287)
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            45777888887766432          12245788899999999999999999998 99999999999998877788889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC------CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .++|+..+++|+.++++++++++|.|.+++.      ++||++||.+++.+.++...|+++|++++.++++++.|++...
T Consensus       104 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~  183 (287)
T PRK06194        104 LADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVT  183 (287)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999999999999987654      7999999999988888899999999999999999999987543


Q ss_pred             ccee--eeCCCccccccc
Q psy5462         147 WGTT--VTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~--v~~~~~~~~~~~  162 (182)
                      ..++  ...|++..+...
T Consensus       184 ~~irv~~v~pg~i~t~~~  201 (287)
T PRK06194        184 DQVGASVLCPYFVPTGIW  201 (287)
T ss_pred             CCeEEEEEEeCcccCccc
Confidence            3444  446776666554

>KOG4169|consensus

Probab=99.91  E-value=1.5e-24  Score=153.79  Aligned_cols=152  Identities=28%  Similarity=0.310  Sum_probs=128.5

Q ss_pred             ccccccccceeccCCCC---------CC--CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           5 RTTGHIHGILFIPWCLP---------TK--THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~---------~~--~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      .|.++|..+.++....+         +.  ..++.+++||+++..+++++++++.+ ||.+|++||+||+.        +
T Consensus        24 ~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~--------~   95 (261)
T KOG4169|consen   24 ALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGIL--------D   95 (261)
T ss_pred             HHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccc--------c
Confidence            45566666666653332         22  35889999999999999999999999 99999999999985        3


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC--cc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM--LW  147 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~~  147 (182)
                      ..+|++.+++|+.|.++-+...+|+|-++.   +|-|||+||..|+.|.|-.+.|++||+++.+|++|+|...-+.  ++
T Consensus        96 dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV  175 (261)
T KOG4169|consen   96 DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGV  175 (261)
T ss_pred             chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCE
Confidence            567999999999999999999999999764   6899999999999999999999999999999999999886654  45


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+...||+.+.+.....
T Consensus       176 ~~~avCPG~t~t~l~~~  192 (261)
T KOG4169|consen  176 RFNAVCPGFTRTDLAEN  192 (261)
T ss_pred             EEEEECCCcchHHHHHH
Confidence            55566999888877655

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.91  E-value=2.7e-23  Score=155.72  Aligned_cols=158  Identities=18%  Similarity=0.179  Sum_probs=130.3

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCCH-
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHTD-   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~~-   73 (182)
                      ++|.++|+.|..+++..+       ..+.++.++.+|++|.+++.++++.+.+ ++++|++|||||.... .++.+.+. 
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~  102 (262)
T TIGR03325        23 DRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDD  102 (262)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCch
Confidence            467788998887764332       1245788999999999999999999988 9999999999997542 33444333 


Q ss_pred             ---HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          74 ---HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        74 ---~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                         ++|+.++++|+.+++.+++++.|.|.+++ |+||+++|..+..+.+....|+++|+++++|+++++.|+++. +.+.
T Consensus       103 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn  180 (262)
T TIGR03325       103 RIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVN  180 (262)
T ss_pred             hhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEE
Confidence               57999999999999999999999997654 899999999988888888999999999999999999999864 5666


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ...|++..|++..
T Consensus       181 ~i~PG~i~t~~~~  193 (262)
T TIGR03325       181 GVAPGGMSSDLRG  193 (262)
T ss_pred             EEecCCCcCCCcc
Confidence            6688888877643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3.3e-23  Score=158.63  Aligned_cols=153  Identities=23%  Similarity=0.209  Sum_probs=129.5

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+.+.+...           ...+.++.++.+|++|++++.++++.+.++|++|++|||||......+.+.+
T Consensus        30 ~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~  109 (306)
T PRK07792         30 LGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMS  109 (306)
T ss_pred             HHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCC
Confidence            45777888877765321           1235678899999999999999999876688999999999998777788889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-------CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-------TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      .++|+..+++|+.+++++++++.++|+++.       .|+||++||.++..+.+....|+++|++++.|+++++.|+.+.
T Consensus       110 ~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  189 (306)
T PRK07792        110 DEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRY  189 (306)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999997541       3799999999988888888999999999999999999999876


Q ss_pred             ccceeeeCCCc
Q psy5462         146 LWGTTVTTPLR  156 (182)
Q Consensus       146 ~~~i~v~~~~~  156 (182)
                      ++.+++.+|+.
T Consensus       190 gI~vn~i~Pg~  200 (306)
T PRK07792        190 GVRANAICPRA  200 (306)
T ss_pred             CeEEEEECCCC
Confidence            55666667763

>PRK05717 oxidoreductase; Validated

Probab=99.91  E-value=6e-23  Score=153.25  Aligned_cols=157  Identities=19%  Similarity=0.176  Sum_probs=133.3

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~~~~~   73 (182)
                      ++|.++|+.+..++....       ..+.++.++.+|+++.+++.++++.+.+ ++++|++|||||...+  .++.+.+.
T Consensus        28 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  107 (255)
T PRK05717         28 AWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSL  107 (255)
T ss_pred             HHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCH
Confidence            567778888887754321       1245688999999999999999999988 9999999999998653  46777899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.+++.+++++.|+|.+. .++||++||..+..+.+....|+++|++++.++++++.+++.. +.+....
T Consensus       108 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~  185 (255)
T PRK05717        108 AHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNAVS  185 (255)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence            9999999999999999999999998765 4899999999988888889999999999999999999998763 6777778


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..++..
T Consensus       186 Pg~i~t~~~  194 (255)
T PRK05717        186 PGWIDARDP  194 (255)
T ss_pred             cccCcCCcc
Confidence            888777653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.90  E-value=5.6e-23  Score=153.64  Aligned_cols=154  Identities=21%  Similarity=0.201  Sum_probs=132.5

Q ss_pred             cccccccccceeccCCCC----------C-C-CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-K-THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+++...          . . ..++.++.||++|++++.++++.+.+ ++++|++|||||.....++.+
T Consensus        20 ~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~   99 (259)
T PRK12384         20 HGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITD   99 (259)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCccc
Confidence            456778888877764321          1 1 24688999999999999999999999 999999999999887777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.++|+..+++|+.+++++.+++.+.|++++ .++||++||..+..+.+....|+++|++++.++++++.|++..++.+
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v  179 (259)
T PRK12384        100 FQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITV  179 (259)
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence            99999999999999999999999999998876 68999999988877878889999999999999999999998766666


Q ss_pred             eeeCCCcc
Q psy5462         150 TVTTPLRS  157 (182)
Q Consensus       150 ~v~~~~~~  157 (182)
                      ....|++.
T Consensus       180 ~~v~pg~~  187 (259)
T PRK12384        180 HSLMLGNL  187 (259)
T ss_pred             EEEecCCc
Confidence            66677753

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.5e-23  Score=153.43  Aligned_cols=160  Identities=18%  Similarity=0.118  Sum_probs=138.5

Q ss_pred             cccccccccceeccCCCCC--------CCceeEEEEccCCCHHHHHHHHHHHHh--cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT--------KTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--------~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+++..+.        .+.++.++.||++|.+++.++++.+.+  ++++|++|||||......+.+.+.
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   98 (260)
T PRK08267         19 LLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPL   98 (260)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCH
Confidence            4567788888877643321        145789999999999999999988766  688999999999987777888899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++++.++++|+.+++.+++++.++|++++.++||++||..+..+.+....|+.+|++++.++++++.++....+.+.+..
T Consensus        99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~  178 (260)
T PRK08267         99 EAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVM  178 (260)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEe
Confidence            99999999999999999999999999887899999999998888888999999999999999999999987767777778


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..+....
T Consensus       179 pg~~~t~~~~  188 (260)
T PRK08267        179 PLFVDTAMLD  188 (260)
T ss_pred             cCCcCCcccc
Confidence            8887776544

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=8.2e-23  Score=152.52  Aligned_cols=159  Identities=21%  Similarity=0.202  Sum_probs=138.2

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.||++|++++.++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        29 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  108 (256)
T PRK06124         29 RALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELD  108 (256)
T ss_pred             HHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCC
Confidence            35667788877776432          12355788999999999999999999999 99999999999987777888889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++.+.+.+++.|.+++.++||++||..+..+.+....|+++|+++..+++.++.|+....+.+...
T Consensus       109 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i  188 (256)
T PRK06124        109 DAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAI  188 (256)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEE
Confidence            99999999999999999999999999887789999999999888888899999999999999999999998666667777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       189 ~pg~v~t~~~  198 (256)
T PRK06124        189 APGYFATETN  198 (256)
T ss_pred             EECCccCcch
Confidence            8888777654

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.6e-23  Score=152.87  Aligned_cols=160  Identities=22%  Similarity=0.222  Sum_probs=136.8

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+.+...       ..+.++.++.+|+++++++.++++.+.+ ++++|++|||+|.....++.+.+.++
T Consensus        33 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~  112 (255)
T PRK06841         33 ELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEED  112 (255)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence            456778888776654321       1134567899999999999999999998 99999999999988777777889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.+++++++++.++|++++.++||++||..+..+.+....|+++|++++.++++++.|++..++.++...|+
T Consensus       113 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg  192 (255)
T PRK06841        113 WDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPT  192 (255)
T ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeC
Confidence            99999999999999999999999887789999999998888888999999999999999999999998766667777888


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..+....
T Consensus       193 ~v~t~~~~  200 (255)
T PRK06841        193 VVLTELGK  200 (255)
T ss_pred             cCcCcccc
Confidence            87776543

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.9e-23  Score=153.18  Aligned_cols=160  Identities=22%  Similarity=0.284  Sum_probs=135.8

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+++...         ..+.++.++.||++++++++++++.+.+ ++++|++|||||.....++.+.+.
T Consensus        24 ~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~  103 (263)
T PRK08226         24 RVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSD  103 (263)
T ss_pred             HHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCH
Confidence            457778988877764321         1245788999999999999999999999 999999999999877777888899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc-ccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      ++++..+++|+.+++.+++++.++|.+++.++||++||..+ ..+.+....|+++|++++.++++++.|+....+.+...
T Consensus       104 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i  183 (263)
T PRK08226        104 EDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAI  183 (263)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            99999999999999999999999998777789999999887 35667788999999999999999999998655666666


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       184 ~pg~v~t~~~~  194 (263)
T PRK08226        184 CPGYVRTPMAE  194 (263)
T ss_pred             ecCcccCHHHH
Confidence            88877776543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.8e-23  Score=153.31  Aligned_cols=155  Identities=15%  Similarity=0.092  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...           ..+.++.++.+|++|++++..+++..   +++|++|||+|....+++.+.+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---g~id~lv~~ag~~~~~~~~~~~  101 (259)
T PRK06125         25 EAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA---GDIDILVNNAGAIPGGGLDDVD  101 (259)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh---CCCCEEEECCCCCCCCCcccCC
Confidence            346677887766653221           12457889999999999999887654   8899999999987777888999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++++++++.|.|++++.|+||++||..+..+.+.+..|+++|+++.+++++++.|+.+.++.+...
T Consensus       102 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i  181 (259)
T PRK06125        102 DAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGV  181 (259)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence            99999999999999999999999999987778999999998888878889999999999999999999998776677777


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      .|++..|+.
T Consensus       182 ~PG~v~t~~  190 (259)
T PRK06125        182 NPGPVATDR  190 (259)
T ss_pred             ecCccccHH
Confidence            888887764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=1.3e-22  Score=150.30  Aligned_cols=159  Identities=21%  Similarity=0.219  Sum_probs=136.9

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.+..           ...+.++.++.+|++|.+++.++++.+.+ ++++|++|||+|.....++.+.
T Consensus        20 ~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   99 (245)
T PRK12824         20 RELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRM   99 (245)
T ss_pred             HHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccC
Confidence            34566787777765431           12345788999999999999999999998 9999999999998877777888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++++.|++.+.++||++||..+..+.+....|+++|++++.++++++.++....+.+.+
T Consensus       100 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  179 (245)
T PRK12824        100 SHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC  179 (245)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEE
Confidence            99999999999999999999999999988778999999999988888889999999999999999999998866667777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..++..
T Consensus       180 v~pg~~~t~~~  190 (245)
T PRK12824        180 IAPGYIATPMV  190 (245)
T ss_pred             EEEcccCCcch
Confidence            78888776654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.90  E-value=5.7e-23  Score=167.56  Aligned_cols=159  Identities=27%  Similarity=0.280  Sum_probs=136.3

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~   73 (182)
                      ++|.++|+.+..+++...       ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||...  ..++.+.+.
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~  102 (520)
T PRK06484         23 QRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTL  102 (520)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCH
Confidence            457788988887764322       2245778899999999999999999999 999999999999743  256778899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC-eEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      ++|+.++++|+.+++.++++++|+|++++.| +||++||..+..+.+....|+++|+++..|+++++.|+....+.+...
T Consensus       103 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i  182 (520)
T PRK06484        103 EEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAV  182 (520)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            9999999999999999999999999876655 999999999998888999999999999999999999998766677777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       183 ~Pg~v~t~~~  192 (520)
T PRK06484        183 LPGYVRTQMV  192 (520)
T ss_pred             ccCCcCchhh
Confidence            8888777664

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7e-23  Score=151.61  Aligned_cols=160  Identities=21%  Similarity=0.186  Sum_probs=138.6

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+.+...          ..+.++.++.+|++|++++.++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~  103 (241)
T PRK07454         24 LAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMP  103 (241)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCC
Confidence            456778888777764321          2245788999999999999999999998 99999999999987777778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++++.++++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++++.++++++.++.....++.+.
T Consensus       104 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i  183 (241)
T PRK07454        104 LSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI  183 (241)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEE
Confidence            99999999999999999999999999887779999999999888888899999999999999999999998767788888


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       184 ~pg~i~t~~~~  194 (241)
T PRK07454        184 TLGAVNTPLWD  194 (241)
T ss_pred             ecCcccCCccc
Confidence            88887776543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.90  E-value=8.5e-23  Score=143.07  Aligned_cols=117  Identities=36%  Similarity=0.496  Sum_probs=111.0

Q ss_pred             CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHh
Q psy5462          22 TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE  100 (182)
Q Consensus        22 ~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  100 (182)
                      ..+.++++++||++++++++++++.+.+ ++++|++|||+|....+++.+.+.++|++++++|+.+++.+.+++.|    
T Consensus        49 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----  124 (167)
T PF00106_consen   49 APGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----  124 (167)
T ss_dssp             HTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee----
Confidence            3468999999999999999999999998 99999999999999988899999999999999999999999999999    


Q ss_pred             CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462         101 NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus       101 ~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      ++.++||++||..+..|.+....|+++|+++.+|+++++.|+
T Consensus       125 ~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  125 QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            447999999999999999999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.90  E-value=4e-23  Score=154.87  Aligned_cols=157  Identities=17%  Similarity=0.167  Sum_probs=130.6

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~~~   74 (182)
                      ++|.++|+.+..+++...       ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||.... .++.+.+.+
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  103 (263)
T PRK06200         24 ERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAE  103 (263)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChh
Confidence            456778888877664321       1244678899999999999999999988 9999999999998643 455566666


Q ss_pred             H----HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          75 E----IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        75 ~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +    |+.++++|+.+++.+++++.|.|+++ +|+||+++|.+++.+.++...|+++|+++..|+++++.|+++. +.++
T Consensus       104 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn  181 (263)
T PRK06200        104 TLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVN  181 (263)
T ss_pred             HHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEE
Confidence            5    88999999999999999999998765 4899999999998888888999999999999999999999874 6666


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      ...|++..|++.
T Consensus       182 ~i~PG~i~t~~~  193 (263)
T PRK06200        182 GVAPGGTVTDLR  193 (263)
T ss_pred             EEeCCccccCCc
Confidence            668888877754

>TIGR02415 23BDH acetoin reductases

Probab=99.90  E-value=1.2e-22  Score=151.36  Aligned_cols=160  Identities=20%  Similarity=0.234  Sum_probs=138.0

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+..          ...+.++.++.+|++|++++.++++.+.+ ++++|++|||+|....+++.+.+
T Consensus        18 ~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   97 (254)
T TIGR02415        18 ERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEIT   97 (254)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCC
Confidence            45677888877665432          22356788999999999999999999998 99999999999988777888889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+..+++|+.+++.+++.+.+.|.+.+ +++||++||..+..+.+..+.|+++|++++.++++++.++....+.+..
T Consensus        98 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  177 (254)
T TIGR02415        98 EEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNA  177 (254)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            999999999999999999999999998865 4899999999988888899999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..+..+.
T Consensus       178 v~Pg~i~t~~~~  189 (254)
T TIGR02415       178 YCPGIVKTPMWE  189 (254)
T ss_pred             EecCcccChhhh
Confidence            788887777643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.2e-22  Score=154.71  Aligned_cols=160  Identities=26%  Similarity=0.286  Sum_probs=133.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC-
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~-   71 (182)
                      ++|.++|+.+..+++..+          ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||.....++.+. 
T Consensus        58 ~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~  137 (293)
T PRK05866         58 EQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESL  137 (293)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhcc
Confidence            346677888877764321          1245688999999999999999999999 9999999999998766555442 


Q ss_pred             -CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          72 -TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        72 -~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                       ++++++..+++|+.+++.++++++|+|++++.++||++||.++.. +.+....|+++|+++++|+++++.|+...++.+
T Consensus       138 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v  217 (293)
T PRK05866        138 DRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHS  217 (293)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence             468899999999999999999999999988889999999976654 356778999999999999999999998777777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      .+.+|+...|++..
T Consensus       218 ~~v~pg~v~T~~~~  231 (293)
T PRK05866        218 TTLYYPLVATPMIA  231 (293)
T ss_pred             EEEEcCcccCcccc
Confidence            77788887777654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=153.44  Aligned_cols=158  Identities=22%  Similarity=0.260  Sum_probs=135.7

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+.+...       ..+.++.++.+|++|.+++.++++.+.+ ++++|++|||||....++..+.+.++
T Consensus        20 ~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   99 (276)
T PRK06482         20 ERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQ   99 (276)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHH
Confidence            456778888877654321       1245788999999999999999999888 89999999999998777777888999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      ++..+++|+.++++++++++|+|++++.++||++||..+..+.++.+.|+++|++++.++++++.++....+++.+..|+
T Consensus       100 ~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg  179 (276)
T PRK06482        100 IRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPG  179 (276)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCC
Confidence            99999999999999999999999887788999999998887888899999999999999999999988666777778888


Q ss_pred             cccccc
Q psy5462         156 RSVTIL  161 (182)
Q Consensus       156 ~~~~~~  161 (182)
                      +..+..
T Consensus       180 ~~~t~~  185 (276)
T PRK06482        180 PARTNF  185 (276)
T ss_pred             ccccCC
Confidence            765544

>KOG1209|consensus

Probab=99.90  E-value=1.1e-23  Score=148.11  Aligned_cols=158  Identities=23%  Similarity=0.229  Sum_probs=133.8

Q ss_pred             cccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHh--cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      +.+.+.|..|...++.+..     ...+...+.+|+++++++..+..++++  +|++|+|+||||..=..+..+.+.+..
T Consensus        26 ~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~av  105 (289)
T KOG1209|consen   26 KEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAV  105 (289)
T ss_pred             HHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHH
Confidence            4567778888888766642     134588999999999999999999988  789999999999987788899999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee--CC
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT--TP  154 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~--~~  154 (182)
                      ++.+++|++|.+++++++. ++..+.+|.||+++|..+..|.|+.++|++||||+..+++.|+.|+.+.  +++|.  -+
T Consensus       106 e~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PF--gv~Vin~it  182 (289)
T KOG1209|consen  106 EQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKPF--GVRVINAIT  182 (289)
T ss_pred             HhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeecc--ccEEEEecc
Confidence            9999999999999999998 5565667999999999999999999999999999999999999999865  45544  44


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      +.+.|...+.
T Consensus       183 GGv~T~Ia~k  192 (289)
T KOG1209|consen  183 GGVATDIADK  192 (289)
T ss_pred             cceecccccC
Confidence            4455555443

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.90  E-value=8.2e-23  Score=151.01  Aligned_cols=161  Identities=16%  Similarity=0.147  Sum_probs=135.2

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+...-           ...+.++.++.+|++|++++.++++.+.+ ++++|++|||+|.....++.+.
T Consensus        16 ~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~   95 (239)
T TIGR01831        16 NRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPAL   95 (239)
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhC
Confidence            45677888877665321           12356789999999999999999999888 9999999999998776677778


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHh-HHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFL-PDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.++++++++++ |.+++++.++||++||.++..+.+....|+++|+++..++++++.|+...++.+.
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  175 (239)
T TIGR01831        96 SEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVN  175 (239)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence            999999999999999999999875 4445556789999999998888889999999999999999999999986666777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ...|++..|.....
T Consensus       176 ~v~Pg~v~t~~~~~  189 (239)
T TIGR01831       176 CIAPGLIDTEMLAE  189 (239)
T ss_pred             EEEEccCccccchh
Confidence            77888887776643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07069 short chain dehydrogenase; Validated

Probab=99.90  E-value=3e-22  Score=148.89  Aligned_cols=159  Identities=25%  Similarity=0.213  Sum_probs=133.6

Q ss_pred             cccccccccceeccCC-CC----------CC--CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWC-LP----------TK--THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-~~----------~~--~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.+..+.+. .+          ..  ...+..+.+|++|++++.++++.+.+ ++++|++|||||....+++.
T Consensus        17 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~   96 (251)
T PRK07069         17 RRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIE   96 (251)
T ss_pred             HHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChh
Confidence            4566788888777644 11          11  12345688999999999999999999 99999999999988777788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc--c
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML--W  147 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~--~  147 (182)
                      +.+.++++.++++|+.+++.+++.+++.|++++.++||++||..++.+.+....|+++|+++..++++++.|+....  +
T Consensus        97 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i  176 (251)
T PRK07069         97 QIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV  176 (251)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcE
Confidence            88999999999999999999999999999987789999999999988888899999999999999999999987654  3


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .+....|++..++..
T Consensus       177 ~v~~v~pg~v~t~~~  191 (251)
T PRK07069        177 RCNSIHPTFIRTGIV  191 (251)
T ss_pred             EEEEEeecccCCcch
Confidence            445557777666654

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=151.87  Aligned_cols=154  Identities=14%  Similarity=0.128  Sum_probs=130.9

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||.....++.+.+
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~  106 (264)
T PRK07576         27 QAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMS  106 (264)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCC
Confidence            456778888877764321          2234678899999999999999999988 99999999999877667778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++++++++.|+|+++ +|+||++||..+..+.+....|+++|++++.|+++++.|+...++.+...
T Consensus       107 ~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v  185 (264)
T PRK07576        107 ANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSI  185 (264)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            99999999999999999999999998765 48999999998888888899999999999999999999998666666667


Q ss_pred             CCCccc
Q psy5462         153 TPLRSV  158 (182)
Q Consensus       153 ~~~~~~  158 (182)
                      .|++..
T Consensus       186 ~pg~~~  191 (264)
T PRK07576        186 VPGPIA  191 (264)
T ss_pred             eccccc
Confidence            777654

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.90  E-value=8.4e-23  Score=157.15  Aligned_cols=159  Identities=18%  Similarity=0.196  Sum_probs=125.8

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCC--HHHHHHHHHHHHhcCCccEEEEcccCCCC--CC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSD--KAEIKKLNENVRKIGYVDILINNAGIVAS--SS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~   67 (182)
                      ++|.++|+.+..+++..+          .  .+.++..+.+|+++  .+.++++.+.+.. .++|++|||||...+  ..
T Consensus        71 ~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~-~didilVnnAG~~~~~~~~  149 (320)
T PLN02780         71 FQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG-LDVGVLINNVGVSYPYARF  149 (320)
T ss_pred             HHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC-CCccEEEEecCcCCCCCcc
Confidence            456778888777664321          1  13478889999995  3334444433311 146799999998653  45


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-c-cCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-A-AVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~-~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      +.+.+.++++.++++|+.+++.++++++|.|.+++.|+||++||.++.. + .|....|++||+++++|+++|+.|+...
T Consensus       150 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~  229 (320)
T PLN02780        150 FHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKS  229 (320)
T ss_pred             cccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7788999999999999999999999999999988889999999998864 3 5778999999999999999999999877


Q ss_pred             ccceeeeCCCcccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~  163 (182)
                      ++.+.+.+|+++.|++..
T Consensus       230 gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        230 GIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             CeEEEEEeeCceecCccc
Confidence            778888899998888654

>KOG1210|consensus

Probab=99.89  E-value=1.1e-22  Score=150.75  Aligned_cols=163  Identities=20%  Similarity=0.214  Sum_probs=142.9

Q ss_pred             ccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           5 RTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++..+|++|.++.+.-+            ..-..+.++.+|++|.+++..+++.+++ ++++|.+|+|||..-++.+.+.
T Consensus        52 e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~  131 (331)
T KOG1210|consen   52 ECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDL  131 (331)
T ss_pred             HHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccC
Confidence            45567888888763321            2223478999999999999999999999 9999999999999999999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      ++++++..+++|+.+.++++++.++.|.+.. .|+|+.+||.++..|..++++|+++|+|+.+|++.+++|+.+.++.++
T Consensus       132 s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt  211 (331)
T KOG1210|consen  132 SPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVT  211 (331)
T ss_pred             CHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHhhcceEEE
Confidence            9999999999999999999999999999876 689999999999999999999999999999999999999997777778


Q ss_pred             eeCCCcccccccccchh
Q psy5462         151 VTTPLRSVTILYQRSVL  167 (182)
Q Consensus       151 v~~~~~~~~~~~~~~~~  167 (182)
                      +..|....++..+.+..
T Consensus       212 ~~~P~~~~tpGfE~En~  228 (331)
T KOG1210|consen  212 LYYPPDTLTPGFERENK  228 (331)
T ss_pred             EEcCCCCCCCccccccc
Confidence            88888877777766543

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-22  Score=150.01  Aligned_cols=159  Identities=19%  Similarity=0.175  Sum_probs=136.3

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+.+..+.         .+.++.++.||++|+++++++++.+.+ ++++|++|||+|...+..+.+.+.
T Consensus        23 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~  102 (252)
T PRK06138         23 KLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDE  102 (252)
T ss_pred             HHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCH
Confidence            4567788887777643321         245688999999999999999999999 999999999999887777788899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++++..+++|+.+++.+++.+++.|++++.++||++||..+..+.+....|+.+|++++.++++++.|+...+..+....
T Consensus       103 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~  182 (252)
T PRK06138        103 ADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVA  182 (252)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence            99999999999999999999999999887899999999988888888899999999999999999999876656666678


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..++..
T Consensus       183 pg~~~t~~~  191 (252)
T PRK06138        183 PGTIDTPYF  191 (252)
T ss_pred             ECCccCcch
Confidence            887766543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.5e-22  Score=152.71  Aligned_cols=160  Identities=20%  Similarity=0.204  Sum_probs=135.8

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.|..+++....    ....+.++.+|++|++++.++++.+.+ ++++|++|||||....+++.+.+.++++.
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   98 (274)
T PRK05693         19 DAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRR   98 (274)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHH
Confidence            4566778888777643221    112467899999999999999999988 99999999999987777788889999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      .+++|+.+++.++++++|.|++. .++||++||..+..+.+....|+++|++++.++++++.|++..++.+.+..|++..
T Consensus        99 ~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~  177 (274)
T PRK05693         99 QFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIA  177 (274)
T ss_pred             HHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccc
Confidence            99999999999999999998754 58999999999888888899999999999999999999998777777777898887


Q ss_pred             cccccc
Q psy5462         159 TILYQR  164 (182)
Q Consensus       159 ~~~~~~  164 (182)
                      |.....
T Consensus       178 t~~~~~  183 (274)
T PRK05693        178 SQFASN  183 (274)
T ss_pred             cccccc
Confidence            776543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.9e-22  Score=149.10  Aligned_cols=157  Identities=17%  Similarity=0.162  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+...-           ...+.++.++.||++|.+++.++++.+.+ ++++|++|||||.....++.+.
T Consensus        27 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~  106 (258)
T PRK09134         27 LDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASF  106 (258)
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccC
Confidence            45677788776654321           11255788999999999999999999988 8999999999998777778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.+++++.+++.+...++||+++|..++.+.+....|+++|++++.++++++.++... +.+.+
T Consensus       107 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~  185 (258)
T PRK09134        107 TRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNA  185 (258)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEE
Confidence            99999999999999999999999999987777899999987777677777899999999999999999998754 67777


Q ss_pred             eCCCcccccc
Q psy5462         152 TTPLRSVTIL  161 (182)
Q Consensus       152 ~~~~~~~~~~  161 (182)
                      .+|++..+..
T Consensus       186 i~PG~v~t~~  195 (258)
T PRK09134        186 IGPGPTLPSG  195 (258)
T ss_pred             eecccccCCc
Confidence            7888765543

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-22  Score=150.50  Aligned_cols=158  Identities=17%  Similarity=0.152  Sum_probs=135.1

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...          ..+.++.++.+|+++++++.++++.+.+ ++++|++|||||......+.+.+
T Consensus        28 ~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~  107 (263)
T PRK07814         28 LAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTS  107 (263)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            456778888776664321          1245788999999999999999999998 99999999999987667778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHh-CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++++.++++|+.+++.+.+++.++|.+ ++.++||++||..+..+.++...|+++|++++.++++++.|+.. .+.+..
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~  186 (263)
T PRK07814        108 TKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNA  186 (263)
T ss_pred             HHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEE
Confidence            9999999999999999999999999987 45789999999999888889999999999999999999999876 356667


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|++..|...
T Consensus       187 i~Pg~v~t~~~  197 (263)
T PRK07814        187 IAPGSILTSAL  197 (263)
T ss_pred             EEeCCCcCchh
Confidence            78887766643

>PLN00015 protochlorophyllide reductase

Probab=99.89  E-value=4.1e-22  Score=152.73  Aligned_cols=159  Identities=14%  Similarity=0.104  Sum_probs=126.4

Q ss_pred             ccccccc-ccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHI-HGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      +.|.++| +.+....+..          ...+.++.++.+|++|.++++++++.+.+ ++++|++|||||...+ .++.+
T Consensus        15 ~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~   94 (308)
T PLN00015         15 KALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPT   94 (308)
T ss_pred             HHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCC
Confidence            4566777 7766654321          12245788899999999999999999988 8999999999998643 34567


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccc-------------------------------
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTA-------------------------------  117 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~-------------------------------  117 (182)
                      .+.++|+.++++|+.+++.+++.++|.|++++  +|+||++||..+..+                               
T Consensus        95 ~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (308)
T PLN00015         95 FTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMI  174 (308)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhc
Confidence            78999999999999999999999999998775  689999999876421                               


Q ss_pred             ----cCCCchhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcc-ccccc
Q psy5462         118 ----AVNVSAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRS-VTILY  162 (182)
Q Consensus       118 ----~~~~~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~-~~~~~  162 (182)
                          ..+...|++||+|+..+++.+++++.. .++.+...+|+++ .|.+.
T Consensus       175 ~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~  225 (308)
T PLN00015        175 DGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLF  225 (308)
T ss_pred             cccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccc
Confidence                123567999999988999999999864 3566677789887 56554

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.4e-22  Score=150.61  Aligned_cols=160  Identities=27%  Similarity=0.313  Sum_probs=134.5

Q ss_pred             cccccccccceeccCCCC----------CCCc-eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTH-VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~-~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+....+          ..+. .+.++.||++|+++++++++.+.+ ++++|++|||+|....+.+.+.
T Consensus        18 ~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~   97 (272)
T PRK07832         18 LRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRL   97 (272)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccC
Confidence            346677888766653221          1122 345678999999999999999988 9999999999998777778889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++.+++++.|+|.+++ .++||++||..+..+.+....|+++|+++.+++++++.|+....+.++
T Consensus        98 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~  177 (272)
T PRK07832         98 THEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS  177 (272)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            9999999999999999999999999997653 589999999988888888999999999999999999999987777788


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       178 ~v~Pg~v~t~~~~  190 (272)
T PRK07832        178 VVVPGAVKTPLVN  190 (272)
T ss_pred             EEecCcccCcchh
Confidence            8899888776543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=4.1e-22  Score=148.35  Aligned_cols=159  Identities=14%  Similarity=0.094  Sum_probs=130.4

Q ss_pred             cccccccccceeccCCCC--------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCC-ccEEEEcccCCC------CCC
Q psy5462           4 DRTTGHIHGILFIPWCLP--------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGY-VDILINNAGIVA------SSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~-id~li~~ag~~~------~~~   67 (182)
                      ++|.++|+.+........        ..+.++.++.||++|++++.++++.+.+ +++ +|++|||||...      ..+
T Consensus        23 ~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~  102 (253)
T PRK08642         23 RAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKK  102 (253)
T ss_pred             HHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCC
Confidence            456778888766542211        1235788999999999999999999988 887 999999998632      245


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|...+++|+.+++.++++++++|.+.+.++||++||..+..+..+...|+++|++++.++++++++++..++
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i  182 (253)
T PRK08642        103 ADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGI  182 (253)
T ss_pred             cccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhCccCe
Confidence            77789999999999999999999999999998877799999999877666667889999999999999999999986655


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .+....|++..++..
T Consensus       183 ~v~~i~pG~v~t~~~  197 (253)
T PRK08642        183 TVNMVSGGLLRTTDA  197 (253)
T ss_pred             EEEEEeecccCCchh
Confidence            666668888777543

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3e-22  Score=149.66  Aligned_cols=157  Identities=24%  Similarity=0.210  Sum_probs=132.4

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+.+....         .+.++.++.+|+++++++.++++.+.+ ++++|++|||||......+...+ 
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-  103 (258)
T PRK08628         25 LRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-  103 (258)
T ss_pred             HHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCH-
Confidence            4677788888777644322         356789999999999999999999998 99999999999976555555544 


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.+++.+++.+.|.+.+. .++||++||..+..+.++...|+++|++++.++++++.|+....+.++...
T Consensus       104 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~  182 (258)
T PRK08628        104 EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVI  182 (258)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEe
Confidence            9999999999999999999999988754 489999999998888888999999999999999999999886666777778


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..++..
T Consensus       183 pg~v~t~~~  191 (258)
T PRK08628        183 PAEVMTPLY  191 (258)
T ss_pred             cCccCCHHH
Confidence            888777654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=3.2e-22  Score=147.90  Aligned_cols=159  Identities=32%  Similarity=0.319  Sum_probs=137.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|+++|+.+..+.+..          ...+.++.++.+|+++++++.++++.+.+ ++++|++|||+|....+.+.+.+
T Consensus        25 ~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  104 (239)
T PRK07666         25 IALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELD  104 (239)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCC
Confidence            45677888877765432          12345788999999999999999999988 99999999999987777777889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      +++|+..+++|+.+++++++++.+++.+++.+++|++||..+..+.+....|+.+|+++..++++++.|++...+.+.+.
T Consensus       105 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v  184 (239)
T PRK07666        105 PAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTAL  184 (239)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            99999999999999999999999999888789999999999888888889999999999999999999998766777777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..+...
T Consensus       185 ~pg~v~t~~~  194 (239)
T PRK07666        185 TPSTVATDMA  194 (239)
T ss_pred             ecCcccCcch
Confidence            8887776653

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3e-22  Score=149.51  Aligned_cols=158  Identities=18%  Similarity=0.188  Sum_probs=134.6

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~   71 (182)
                      ++|+++|+.|..+++...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||...+ .++.+.
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~  102 (258)
T PRK07890         23 VRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADA  102 (258)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccC
Confidence            457788888877764321          1245788999999999999999999988 9999999999998654 567788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++.+++++.+.|.+.+ ++||++||..+..+.++...|+++|++++.++++++.|++...+.+..
T Consensus       103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~  181 (258)
T PRK07890        103 DFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNS  181 (258)
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            8999999999999999999999999987654 799999999988888889999999999999999999999876667777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|+...++..
T Consensus       182 v~pg~v~~~~~  192 (258)
T PRK07890        182 VAPGYIWGDPL  192 (258)
T ss_pred             EeCCccCcHHH
Confidence            78887766643

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.1e-22  Score=147.51  Aligned_cols=160  Identities=25%  Similarity=0.234  Sum_probs=137.1

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  104 (250)
T PRK12939         25 EALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELD  104 (250)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            356677888776653221          2345789999999999999999999999 99999999999988777778889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++++..+++|+.+++.+++++.+++.+++.|++|++||..+..+.+....|+++|++++.+++.++.++....+.+...
T Consensus       105 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v  184 (250)
T PRK12939        105 IDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAI  184 (250)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEE
Confidence            99999999999999999999999999887789999999998888888889999999999999999999988665666666


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       185 ~pg~v~t~~~~  195 (250)
T PRK12939        185 APGLTATEATA  195 (250)
T ss_pred             EECCCCCcccc
Confidence            88887776653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.89  E-value=3.6e-22  Score=147.87  Aligned_cols=159  Identities=22%  Similarity=0.266  Sum_probs=134.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+.......+       ..+.++.++.+|+++.++++++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  103 (245)
T PRK12936         24 RLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDED  103 (245)
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHH
Confidence            456677876655433221       1245688899999999999999999999 99999999999988777777888999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++++++++.+.+.+++.++||++||..+..+.+....|+.+|+++..+++.++.++......+...+|+
T Consensus       104 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg  183 (245)
T PRK12936        104 WDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPG  183 (245)
T ss_pred             HHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEEC
Confidence            99999999999999999999988777778999999998888888899999999999999999999988665677777888


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..+...
T Consensus       184 ~~~t~~~  190 (245)
T PRK12936        184 FIESAMT  190 (245)
T ss_pred             cCcCchh
Confidence            7766554

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.1e-22  Score=147.97  Aligned_cols=156  Identities=22%  Similarity=0.230  Sum_probs=127.0

Q ss_pred             cccccccccceeccCCC--------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCL--------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.+..+....              ...+.++.++++|++|++++.++++.+.+ ++++|++|||||.....++
T Consensus        26 ~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~  105 (257)
T PRK12744         26 RDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPI  105 (257)
T ss_pred             HHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCc
Confidence            45677788855553221              11245788999999999999999999988 9999999999998777777


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEE-eccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI-SSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~i-ss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+.+.++|+..+++|+.+++.+++++.|+|++  .++++++ ||..+ .+.+....|+++|++++.|+++++.|+.+.++
T Consensus       106 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i  182 (257)
T PRK12744        106 VEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLG-AFTPFYSAYAGSKAPVEHFTRAASKEFGARGI  182 (257)
T ss_pred             ccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhc-ccCCCcccchhhHHHHHHHHHHHHHHhCcCce
Confidence            88899999999999999999999999998865  3677776 44433 34567889999999999999999999987667


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .+....|++..++..
T Consensus       183 ~v~~v~pg~v~t~~~  197 (257)
T PRK12744        183 SVTAVGPGPMDTPFF  197 (257)
T ss_pred             EEEEEecCccccchh
Confidence            777778998877654

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.3e-22  Score=146.33  Aligned_cols=157  Identities=20%  Similarity=0.215  Sum_probs=133.6

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+......           +...+.++.++.+|+++.+++.++++.+.+ ++++|++|||||.....++.+.
T Consensus        23 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  102 (245)
T PRK12937         23 RRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADF  102 (245)
T ss_pred             HHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            4567778877654322           123356789999999999999999999999 9999999999998777777888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.+++++.+.|.+  .++||++||..+..+.+....|+++|++++.++++++.++....+.+..
T Consensus       103 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~  180 (245)
T PRK12937        103 DLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNA  180 (245)
T ss_pred             CHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999999999999999998854  4799999998888888889999999999999999999998866666677


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|++..++..
T Consensus       181 i~pg~~~t~~~  191 (245)
T PRK12937        181 VAPGPVATELF  191 (245)
T ss_pred             EEeCCccCchh
Confidence            78988877764

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.2e-22  Score=147.78  Aligned_cols=161  Identities=15%  Similarity=0.095  Sum_probs=129.1

Q ss_pred             ccccccc-ccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHI-HGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++| +.+....+....            .+.+++++.||++|++++.++++.+.+++++|++|||+|......-..
T Consensus        26 ~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~  105 (253)
T PRK07904         26 ERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELW  105 (253)
T ss_pred             HHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcc
Confidence            3455664 777766543321            123788999999999999999988776678999999999864322111


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++..+.+++|+.+++.+++.+.|.|++++.++||++||..+..+.++...|++||+++.+|+++++.|+....+.+.
T Consensus       106 ~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~  185 (253)
T PRK07904        106 QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVL  185 (253)
T ss_pred             cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence            24455667899999999999999999999888899999999988777778889999999999999999999987777888


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +..|++..|+....
T Consensus       186 ~v~Pg~v~t~~~~~  199 (253)
T PRK07904        186 VVRPGQVRTRMSAH  199 (253)
T ss_pred             EEeeCceecchhcc
Confidence            88999888875543

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.89  E-value=5.2e-22  Score=148.33  Aligned_cols=155  Identities=17%  Similarity=0.099  Sum_probs=125.6

Q ss_pred             ccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCc----cEEEEcccCCCCC--Ccc
Q psy5462           9 HIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYV----DILINNAGIVASS--SVL   69 (182)
Q Consensus         9 ~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~i----d~li~~ag~~~~~--~~~   69 (182)
                      .|+.+..+.+...          .  .+.++.++.+|++|+++++++++.+.+ ++.+    |++|||||.....  ...
T Consensus        27 ~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~  106 (256)
T TIGR01500        27 PGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFV  106 (256)
T ss_pred             CCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccc
Confidence            5777766653321          1  245788999999999999999999988 7653    6999999975432  233


Q ss_pred             cC-CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          70 AH-TDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        70 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      +. +.++|+..+++|+.+++.+++.++|.|++++  .++||++||..+..+.+....|+++|++++.|+++|+.|++..+
T Consensus       107 ~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~  186 (256)
T TIGR01500       107 DLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNPN  186 (256)
T ss_pred             cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            22 5789999999999999999999999998753  47999999999988888999999999999999999999998765


Q ss_pred             cceeeeCCCcccccccc
Q psy5462         147 WGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~~  163 (182)
                      +.+....|++..|++..
T Consensus       187 i~v~~v~PG~v~T~~~~  203 (256)
T TIGR01500       187 VRVLNYAPGVLDTDMQQ  203 (256)
T ss_pred             eEEEEecCCcccchHHH
Confidence            66666689888887654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8e-22  Score=149.02  Aligned_cols=159  Identities=22%  Similarity=0.233  Sum_probs=137.1

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+.+...          .  .+.++.++.+|++|+++++. ++.+.+ ++++|++|||||...++.+.+
T Consensus        21 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~   99 (280)
T PRK06914         21 LELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEE   99 (280)
T ss_pred             HHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCcccc
Confidence            456778888877754321          1  13578899999999999999 888888 899999999999887777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++++..+++|+.+++.+++.+++.|++.+.++||++||..+..+.++...|+++|++++.++++++.|+...+++++
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~  179 (280)
T PRK06914        100 IPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVA  179 (280)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEE
Confidence            89999999999999999999999999998877889999999988888888999999999999999999999887777888


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++.+.
T Consensus       180 ~v~pg~~~t~~~~  192 (280)
T PRK06914        180 LIEPGSYNTNIWE  192 (280)
T ss_pred             EEecCCcccchhh
Confidence            8899887777543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.89  E-value=5.7e-22  Score=147.21  Aligned_cols=157  Identities=20%  Similarity=0.168  Sum_probs=133.7

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+.+...       +.+.++.++.||++|.+++..+++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  103 (249)
T PRK06500         24 RQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAM  103 (249)
T ss_pred             HHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence            456778888776654321       2255788999999999999999999998 89999999999987767777889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.+++.+++++.|+|.+  .+++|+++|..+..+.+....|+++|++++.++++++.|+...++.+.+..|+
T Consensus       104 ~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  181 (249)
T PRK06500        104 FDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPG  181 (249)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            9999999999999999999998854  47899999988888888899999999999999999999988666677777888


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..++..
T Consensus       182 ~~~t~~~  188 (249)
T PRK06500        182 PVQTPLY  188 (249)
T ss_pred             cCCCHHH
Confidence            8777654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.89  E-value=5.5e-22  Score=147.40  Aligned_cols=159  Identities=24%  Similarity=0.260  Sum_probs=137.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..++....          ..+.++.++.+|++|.++++++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        21 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~  100 (250)
T TIGR03206        21 RRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTE  100 (250)
T ss_pred             HHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            456778888776654321          2245788999999999999999999988 99999999999987667777888


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++.+.+++.+.|.+.+.++||++||..++.+.+....|+.+|++++.++++++.++......+.+.
T Consensus       101 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v  180 (250)
T TIGR03206       101 PPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVV  180 (250)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEE
Confidence            99999999999999999999999999887788999999999888888899999999999999999999987666778888


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       181 ~pg~~~~~~~  190 (250)
T TIGR03206       181 CPGPTDTALL  190 (250)
T ss_pred             ecCcccchhH
Confidence            8888776643

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.9e-22  Score=142.12  Aligned_cols=127  Identities=19%  Similarity=0.136  Sum_probs=112.8

Q ss_pred             EEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEE
Q psy5462          29 YFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC  108 (182)
Q Consensus        29 ~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~  108 (182)
                      .++||++|+++++++++.+   +++|++|||||.....++.+.+.++|+..+++|+.+++++++++.|+|++  .++|++
T Consensus        35 ~~~~D~~~~~~~~~~~~~~---~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~  109 (199)
T PRK07578         35 DVQVDITDPASIRALFEKV---GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTL  109 (199)
T ss_pred             ceEecCCChHHHHHHHHhc---CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEE
Confidence            5789999999999988764   78999999999877777888899999999999999999999999999875  479999


Q ss_pred             EeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         109 ISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       109 iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +||..+..+.+....|+++|+++++|+++++.|+ ..++.+...+|++..+..
T Consensus       110 iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~  161 (199)
T PRK07578        110 TSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESL  161 (199)
T ss_pred             EcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCch
Confidence            9999988888899999999999999999999999 555667777888877664

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8e-22  Score=148.77  Aligned_cols=158  Identities=18%  Similarity=0.236  Sum_probs=134.9

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+....          ...+.++.++.+|++|++++.++++.+.+ ++++|++|||||......+.+.+
T Consensus        28 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~  107 (274)
T PRK07775         28 IELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEIS  107 (274)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCC
Confidence            45677788776654321          22345788999999999999999999988 89999999999987777777888


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++++..+++|+.+++++++++++.+++++.++||++||..++.+.++...|+.+|++++.++++++.++...++.+.+.
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v  187 (274)
T PRK07775        108 TEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIV  187 (274)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            99999999999999999999999999887778999999998888888888999999999999999999987666777788


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      +|++..+..
T Consensus       188 ~pG~~~t~~  196 (274)
T PRK07775        188 HPGPTLTGM  196 (274)
T ss_pred             eCCcccCcc
Confidence            888765553

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.7e-22  Score=148.25  Aligned_cols=159  Identities=18%  Similarity=0.226  Sum_probs=135.5

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++++++|+.|..+++...         ..+.++.++.+|++|++++..+++.+.+++++|++|||||.....++.+.+.+
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~  102 (263)
T PRK09072         23 EALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPE  102 (263)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHH
Confidence            456778888877763321         12457889999999999999999988667889999999998777778888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +++..+++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+.+|+++..++++++.|+...++.+....|
T Consensus       103 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P  182 (263)
T PRK09072        103 AIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAP  182 (263)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            99999999999999999999999988777999999999888888889999999999999999999999866566666678


Q ss_pred             Cccccccc
Q psy5462         155 LRSVTILY  162 (182)
Q Consensus       155 ~~~~~~~~  162 (182)
                      ++..+...
T Consensus       183 g~~~t~~~  190 (263)
T PRK09072        183 RATRTAMN  190 (263)
T ss_pred             Ccccccch
Confidence            87766553

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.9e-22  Score=146.17  Aligned_cols=159  Identities=23%  Similarity=0.209  Sum_probs=131.2

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|.++|+.+......           +...+.++.++.||++|.+++.++++.+.+ ++++|++|||||...+ ..+.+
T Consensus        20 ~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   99 (248)
T PRK06123         20 LLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQ   99 (248)
T ss_pred             HHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhh
Confidence            4566778776554321           112245688999999999999999999998 9999999999998754 45777


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .+.++|+.++++|+.+++.++++++++|.++.   +|+||++||.++..+.+. ...|+++|++++.++++++.++....
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~  179 (248)
T PRK06123        100 MDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG  179 (248)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccC
Confidence            88999999999999999999999999987642   478999999988777665 36799999999999999999998766


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.+.+..|++..++..
T Consensus       180 i~v~~i~pg~v~~~~~  195 (248)
T PRK06123        180 IRVNAVRPGVIYTEIH  195 (248)
T ss_pred             eEEEEEecCcccCchh
Confidence            7777888988877654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=145.81  Aligned_cols=161  Identities=17%  Similarity=0.166  Sum_probs=135.4

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+++...          .  .+.+++++.||++|++++.++++.+.+ ++++|++|||||......+.+
T Consensus        20 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~   99 (248)
T PRK08251         20 REFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGT   99 (248)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCc
Confidence            356667777766553221          1  145789999999999999999999998 999999999999987777777


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.+.+...+++|+.+++.+++++.+.+++.+.++||++||..+..+.+. ...|+.+|++++.+++.++.++......+
T Consensus       100 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v  179 (248)
T PRK08251        100 GKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKV  179 (248)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            88899999999999999999999999998877889999999888777664 68999999999999999999988666677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      .+.+|++..++....
T Consensus       180 ~~v~pg~v~t~~~~~  194 (248)
T PRK08251        180 STIEPGYIRSEMNAK  194 (248)
T ss_pred             EEEecCcCcchhhhc
Confidence            777898877765543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=145.85  Aligned_cols=159  Identities=22%  Similarity=0.238  Sum_probs=132.5

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+..+          ..+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.+
T Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  109 (259)
T PRK08213         30 EALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHP  109 (259)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCC
Confidence            456677888776654321          2345788999999999999999999988 89999999999987666677788


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHH-HHhCCCCeEEEEeccccccccCC----CchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPD-MLENNTGHIVCISSIAALTAAVN----VSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~ii~iss~~~~~~~~~----~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+.|+.++++|+.+++.+++++.++ |.+++.++||++||..+..+.++    ...|+++|++++.++++++.++...++
T Consensus       110 ~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi  189 (259)
T PRK08213        110 VEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGI  189 (259)
T ss_pred             HHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCE
Confidence            9999999999999999999999998 77666789999999877665443    489999999999999999999987666


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .+.+..|++..++..
T Consensus       190 ~v~~v~Pg~~~t~~~  204 (259)
T PRK08213        190 RVNAIAPGFFPTKMT  204 (259)
T ss_pred             EEEEEecCcCCCcch
Confidence            777778888776654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=7.5e-22  Score=147.26  Aligned_cols=159  Identities=19%  Similarity=0.178  Sum_probs=138.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...          ..+.+++++.||++|++++.++++.+.+ ++++|++|||||......+.+.+
T Consensus        22 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~  101 (258)
T PRK12429         22 LALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFP  101 (258)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            456778888877764332          2256788999999999999999999998 89999999999988777788889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++++..+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|+++..+++.++.|+....+.+.+.
T Consensus       102 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~  181 (258)
T PRK12429        102 TEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAI  181 (258)
T ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            99999999999999999999999999988889999999999888889999999999999999999999988665667777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       182 ~pg~v~~~~~  191 (258)
T PRK12429        182 CPGYVDTPLV  191 (258)
T ss_pred             ecCCCcchhh
Confidence            8887766544

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.88  E-value=1.1e-21  Score=145.85  Aligned_cols=155  Identities=22%  Similarity=0.188  Sum_probs=132.5

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+++...       ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||... ..++.+.+.+
T Consensus        18 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   97 (248)
T PRK10538         18 RRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVE   97 (248)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHH
Confidence            456778888887764332       1245788999999999999999999988 899999999999754 3456677899


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.++++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+++|++++.+++.++.++....+.+.+..|
T Consensus        98 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p  177 (248)
T PRK10538         98 DWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            99999999999999999999999988778899999999888888888999999999999999999999876666777788


Q ss_pred             Cccc
Q psy5462         155 LRSV  158 (182)
Q Consensus       155 ~~~~  158 (182)
                      +...
T Consensus       178 g~i~  181 (248)
T PRK10538        178 GLVG  181 (248)
T ss_pred             Ceec
Confidence            8765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.1e-21  Score=147.65  Aligned_cols=158  Identities=20%  Similarity=0.169  Sum_probs=133.6

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|.++|+.+..+....           ...+.++.++.||++|.+++.++++.+.+ ++++|++|||||.... ..+.+
T Consensus        64 ~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~  143 (290)
T PRK06701         64 VLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLED  143 (290)
T ss_pred             HHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCccc
Confidence            45677788877664332           12245788999999999999999999988 9999999999998643 56778


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|...+++|+.+++.+++++.+.|.+  .++||++||..++.+.+....|+++|++++.++++++.++....+.+.
T Consensus       144 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~  221 (290)
T PRK06701        144 ITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVN  221 (290)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            899999999999999999999999998854  479999999998888888899999999999999999999987667777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       222 ~i~pG~v~T~~~~  234 (290)
T PRK06701        222 AVAPGPIWTPLIP  234 (290)
T ss_pred             EEecCCCCCcccc
Confidence            7788887776543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.88  E-value=1e-21  Score=145.17  Aligned_cols=160  Identities=20%  Similarity=0.155  Sum_probs=136.6

Q ss_pred             cccccccccceeccC-CCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPW-CLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.. ...          ..+.++.++.+|++|++++.++++.+.+ ++++|++|||+|...+..+.+.
T Consensus        18 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   97 (242)
T TIGR01829        18 QRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM   97 (242)
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhC
Confidence            456777887766554 111          1245788999999999999999999998 9999999999998877777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++++..+++|+.+++.+++.+++.|++.+.++||++||..+..+.++...|+++|+++..++++++.++....+.+.+
T Consensus        98 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~  177 (242)
T TIGR01829        98 TYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT  177 (242)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            99999999999999999999999999988777899999999888888889999999999999999999998876677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       178 i~pg~~~t~~~~  189 (242)
T TIGR01829       178 ISPGYIATDMVM  189 (242)
T ss_pred             EeeCCCcCcccc
Confidence            788887766543

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-21  Score=146.48  Aligned_cols=158  Identities=17%  Similarity=0.153  Sum_probs=134.7

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+..          ...+.++.++.+|++|++++.++++.+.+ ++++|++|||+|......+.+.+
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~  104 (262)
T PRK13394         25 LELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYS  104 (262)
T ss_pred             HHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCC
Confidence            45677888887665433          12355788899999999999999999988 99999999999987777777788


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHH-HhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDM-LENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++++..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.+....|+++|+++..+++.++.++....+.+.+
T Consensus       105 ~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~  184 (262)
T PRK13394        105 FADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHV  184 (262)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999999999999999999 66667899999999888888888999999999999999999998765666777


Q ss_pred             eCCCcccccc
Q psy5462         152 TTPLRSVTIL  161 (182)
Q Consensus       152 ~~~~~~~~~~  161 (182)
                      ..|++..++.
T Consensus       185 v~pg~v~~~~  194 (262)
T PRK13394        185 VCPGFVRTPL  194 (262)
T ss_pred             EeeCcccchh
Confidence            7888776654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.3e-21  Score=145.93  Aligned_cols=159  Identities=20%  Similarity=0.213  Sum_probs=134.6

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~   69 (182)
                      ++|.++|+.+..+.+...           ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||...+  .++.
T Consensus        20 ~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   99 (256)
T PRK12745         20 RALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLL   99 (256)
T ss_pred             HHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChh
Confidence            467788888877764322           1245788999999999999999999999 9999999999997543  4577


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.+.++|+..+++|+.+++++++++.+.|+++.      .++||++||..+..+.+....|+.+|++++.++++++.++.
T Consensus       100 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~  179 (256)
T PRK12745        100 DLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLA  179 (256)
T ss_pred             hCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            788999999999999999999999999998754      35799999999888888889999999999999999999988


Q ss_pred             CCccceeeeCCCccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~  162 (182)
                      .....+....|++..++..
T Consensus       180 ~~gi~v~~i~pg~v~t~~~  198 (256)
T PRK12745        180 EEGIGVYEVRPGLIKTDMT  198 (256)
T ss_pred             HhCCEEEEEecCCCcCccc
Confidence            6667778888888776554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.88  E-value=1.2e-21  Score=147.31  Aligned_cols=156  Identities=15%  Similarity=0.147  Sum_probs=122.7

Q ss_pred             cccccccccceeccCC-----------CC-CCCceeEEEEccCCCHHHH----HHHHHHHHh-cCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LP-TKTHVAVYFKADVSDKAEI----KKLNENVRK-IGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~-~~~~~~~~~~~D~s~~~~~----~~~~~~~~~-~~~id~li~~ag~~~~~   66 (182)
                      ++|.++|+.+..+...           +. ..+.++.++.||++|++++    +++++.+.+ ++++|+||||||...+.
T Consensus        19 ~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~   98 (267)
T TIGR02685        19 VALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPT   98 (267)
T ss_pred             HHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCC
Confidence            4577888888776422           11 1234677899999999865    566777777 89999999999986555


Q ss_pred             CcccCCH-----------HHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHH
Q psy5462          67 SVLAHTD-----------HEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKY  129 (182)
Q Consensus        67 ~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKa  129 (182)
                      ++.+.+.           ++|..++++|+.+++.+++++.++|.+.      ..+.||+++|..+..+.++...|+++|+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~  178 (267)
T TIGR02685        99 PLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKH  178 (267)
T ss_pred             cccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHHHHH
Confidence            5544333           3589999999999999999999998643      2468999999888888888999999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      ++++|+++++.|++..++.+...+|++..+
T Consensus       179 a~~~~~~~la~e~~~~gi~v~~v~PG~~~~  208 (267)
T TIGR02685       179 ALEGLTRSAALELAPLQIRVNGVAPGLSLL  208 (267)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCCccC
Confidence            999999999999987666777778887543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=5.6e-22  Score=138.70  Aligned_cols=155  Identities=20%  Similarity=0.228  Sum_probs=127.8

Q ss_pred             ccccccccceeccCCCC------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc--cCCHHH
Q psy5462           5 RTTGHIHGILFIPWCLP------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL--AHTDHE   75 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~--~~~~~~   75 (182)
                      +|.+.|..|.+-.+...      ......+.+.||+.|.++++++++++.+ |+.++++|||||+...-.+.  +...++
T Consensus        24 ~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~  103 (245)
T COG3967          24 RFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDD  103 (245)
T ss_pred             HHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhH
Confidence            45666777766654332      3456788999999999999999999999 99999999999998764433  345677


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc-ceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW-GTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~-~i~v~~~  154 (182)
                      .+..+.+|+.+|+.++++++|++.+++.+.||++||..++.|....+.|+++|||+..++.+|+-++....+ -|.+..|
T Consensus       104 ~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP  183 (245)
T COG3967         104 AEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPP  183 (245)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCC
Confidence            889999999999999999999999999999999999999999999999999999999999999999886432 3344455


Q ss_pred             Ccccc
Q psy5462         155 LRSVT  159 (182)
Q Consensus       155 ~~~~~  159 (182)
                      +...+
T Consensus       184 ~V~t~  188 (245)
T COG3967         184 LVDTT  188 (245)
T ss_pred             ceecC
Confidence            54443

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.88  E-value=1.8e-21  Score=144.64  Aligned_cols=159  Identities=22%  Similarity=0.190  Sum_probs=130.9

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|+++|+.+......           +...+.++.++.||++|++++..+++.+.+ ++++|++|||||.... ..+.+
T Consensus        20 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   99 (248)
T PRK06947         20 VLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLAD   99 (248)
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhh
Confidence            4566778777554311           112245788999999999999999999988 9999999999998654 45677


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .+.++|+.++++|+.+++.+++.+++.+..++   .++||++||..+..+.+. +..|+++|++++.++++++.++.+.+
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~  179 (248)
T PRK06947        100 MDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG  179 (248)
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhC
Confidence            88999999999999999999999999887553   478999999888776553 57899999999999999999998766


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.+.+..|++..|+..
T Consensus       180 i~v~~i~Pg~v~t~~~  195 (248)
T PRK06947        180 VRVNAVRPGLIETEIH  195 (248)
T ss_pred             cEEEEEeccCcccccc
Confidence            7788889998888764

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.88  E-value=7.9e-22  Score=151.46  Aligned_cols=157  Identities=21%  Similarity=0.169  Sum_probs=125.2

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|....+...          .  .+.++.++.||++|.++++++++.+.+ ++++|+||||||.... +..+
T Consensus        32 ~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~  110 (313)
T PRK05854         32 RRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQ  110 (313)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC-Cccc
Confidence            456778888877654321          1  134688999999999999999999988 9999999999998653 3345


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------cCCCchhhhhHHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------AVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      .+.+.|+.++++|+.+++.+++.++|.|++. .++||++||.++..+            .++...|+.||+++..|++.|
T Consensus       111 ~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l  189 (313)
T PRK05854        111 TTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALEL  189 (313)
T ss_pred             cCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHH
Confidence            6788999999999999999999999999765 589999999876543            244678999999999999999


Q ss_pred             HhhhCC--CccceeeeCCCccccccc
Q psy5462         139 KCFSGY--MLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       139 a~e~~~--~~~~i~v~~~~~~~~~~~  162 (182)
                      +.++..  .++.+...+|++..|...
T Consensus       190 a~~~~~~~~gI~v~~v~PG~v~T~~~  215 (313)
T PRK05854        190 DRRSRAAGWGITSNLAHPGVAPTNLL  215 (313)
T ss_pred             HHHhhcCCCCeEEEEEecceeccCcc
Confidence            987543  334555558888877765

>KOG1207|consensus

Probab=99.88  E-value=2.1e-23  Score=142.41  Aligned_cols=153  Identities=20%  Similarity=0.184  Sum_probs=127.8

Q ss_pred             ccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           5 RTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      .|.+.|+++..+++...       +...-+..+.+|+++.+.+.+.+..+   +++|.+|||||..-..+|.+.+.+.++
T Consensus        26 ~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v---~pidgLVNNAgvA~~~pf~eiT~q~fD  102 (245)
T KOG1207|consen   26 SLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV---FPIDGLVNNAGVATNHPFGEITQQSFD  102 (245)
T ss_pred             HHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc---CchhhhhccchhhhcchHHHHhHHhhc
Confidence            45677888888875443       33445788999999988887776665   789999999999988999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee--CC
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT--TP  154 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~--~~  154 (182)
                      +.+.+|+.+++.+.|...+.+..+. +|.||++||.++.++..+...|+++|+|+++++|++|.|+++.  +||||  +|
T Consensus       103 r~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELGp~--kIRVNsVNP  180 (245)
T KOG1207|consen  103 RTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQ--KIRVNSVNP  180 (245)
T ss_pred             ceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhCcc--eeEeeccCC
Confidence            9999999999999999877776554 7899999999999999999999999999999999999999966  55555  55


Q ss_pred             Cccccccc
Q psy5462         155 LRSVTILY  162 (182)
Q Consensus       155 ~~~~~~~~  162 (182)
                      ..+.|.+.
T Consensus       181 TVVmT~MG  188 (245)
T KOG1207|consen  181 TVVMTDMG  188 (245)
T ss_pred             eEEEeccc
Confidence            55555444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=2.1e-21  Score=143.10  Aligned_cols=153  Identities=25%  Similarity=0.224  Sum_probs=127.4

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.+..+.+.... ...++.++.+|++++      ++.+.+ ++++|++|||||... ..++.+.+.++|+..+
T Consensus        23 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~   96 (235)
T PRK06550         23 RAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIF   96 (235)
T ss_pred             HHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHH
Confidence            4567789888877654322 245788999999988      344444 589999999999764 3567778899999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++|+.+++++++++.+.+++++.++||++||..+..+.++...|+++|++++.++++++.|+...++.+.+..|++..++
T Consensus        97 ~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~  176 (235)
T PRK06550         97 DTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTP  176 (235)
T ss_pred             HHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCc
Confidence            99999999999999999988778999999999988888889999999999999999999999876677777788887776


Q ss_pred             cc
Q psy5462         161 LY  162 (182)
Q Consensus       161 ~~  162 (182)
                      ..
T Consensus       177 ~~  178 (235)
T PRK06550        177 MT  178 (235)
T ss_pred             cc
Confidence            54

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.3e-21  Score=141.98  Aligned_cols=156  Identities=19%  Similarity=0.194  Sum_probs=133.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.+..+.+.... .....++.+|++|+++++++++.+.+ + ++|++|||+|.....++.+.+.++|+..+++
T Consensus        21 ~~l~~~G~~v~~~~r~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~   98 (234)
T PRK07577         21 LRLANLGHQVIGIARSAID-DFPGELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDL   98 (234)
T ss_pred             HHHHHCCCEEEEEeCCccc-ccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHH
Confidence            4677889988888765443 22235789999999999999999888 6 5899999999987777778899999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.+++.+.+++++.|++.+.++||++||... .+.+....|+++|++++.++++++.|++..++.+.+.+|++..++..
T Consensus        99 n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~  177 (234)
T PRK07577         99 NVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELF  177 (234)
T ss_pred             HhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccc
Confidence            99999999999999999887889999999863 46677899999999999999999999987667777778888777654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4e-21  Score=143.67  Aligned_cols=158  Identities=19%  Similarity=0.162  Sum_probs=133.6

Q ss_pred             ccccccccc-ceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHG-ILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+. +..+.+...          ..+.++.++.+|+++++++.++++.+.+ ++++|++|||+|......+.+.
T Consensus        24 ~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~  103 (260)
T PRK06198         24 RAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDT  103 (260)
T ss_pred             HHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhC
Confidence            456677887 665553321          2345788899999999999999999988 9999999999998777777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.+++.+++++++.|.+++ .+++|++||..++.+.+....|+++|+++++++++++.|+....+.+.
T Consensus       104 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~  183 (260)
T PRK06198        104 SPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVN  183 (260)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            9999999999999999999999999997754 589999999998878888899999999999999999999886656666


Q ss_pred             eeCCCcccccc
Q psy5462         151 VTTPLRSVTIL  161 (182)
Q Consensus       151 v~~~~~~~~~~  161 (182)
                      ..+|++..++.
T Consensus       184 ~i~pg~~~t~~  194 (260)
T PRK06198        184 GLNIGWMATEG  194 (260)
T ss_pred             EEeeccccCcc
Confidence            67888776664

>PRK09186 flagellin modification protein A; Provisional

Probab=99.87  E-value=3.2e-21  Score=143.81  Aligned_cols=156  Identities=14%  Similarity=0.116  Sum_probs=125.4

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC---CCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA---SSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~---~~~   67 (182)
                      ++|.++|+.+..+.+....            .+..+.++.||++|++++.++++.+.+ ++++|++||||+...   ..+
T Consensus        22 ~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~  101 (256)
T PRK09186         22 KAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKK  101 (256)
T ss_pred             HHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCc
Confidence            4567788888777543221            123456779999999999999999988 999999999997543   245


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC----------CCchhhhhHHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV----------NVSAYFASKYGVTENHPS  137 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~----------~~~~y~~sKaa~~~~~~~  137 (182)
                      +.+.+.++|...+++|+.+++.+++++++.|++++.++||++||..+..+..          ....|+++|+++++++++
T Consensus       102 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~  181 (256)
T PRK09186        102 FFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKY  181 (256)
T ss_pred             cccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHH
Confidence            7788999999999999999999999999999988788999999987654211          124799999999999999


Q ss_pred             HHhhhCCCccceeeeCCCcccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      ++.|+....+.+++..|++..+
T Consensus       182 la~e~~~~~i~v~~i~Pg~~~~  203 (256)
T PRK09186        182 LAKYFKDSNIRVNCVSPGGILD  203 (256)
T ss_pred             HHHHhCcCCeEEEEEecccccC
Confidence            9999986656666778876543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-21  Score=142.42  Aligned_cols=159  Identities=11%  Similarity=0.081  Sum_probs=132.1

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCC--HHHHHHHHHHHHh-c-CCccEEEEcccCCCC-CC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSD--KAEIKKLNENVRK-I-GYVDILINNAGIVAS-SS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~--~~~~~~~~~~~~~-~-~~id~li~~ag~~~~-~~   67 (182)
                      ++|.++|+.+..+++...           ..+..+.++.+|+++  .+++.++++.+.+ + +++|++|||||.... .+
T Consensus        24 ~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~  103 (239)
T PRK08703         24 KAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSP  103 (239)
T ss_pred             HHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCC
Confidence            456677888777764332           123457788999986  6788999998888 7 789999999997643 56


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC-c
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM-L  146 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~-~  146 (182)
                      +.+.+.++|...+++|+.+++++++++.+.|.+.+.+++|++||..+..+.+....|+++|++++.++++++.|+... .
T Consensus       104 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~  183 (239)
T PRK08703        104 LDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGN  183 (239)
T ss_pred             ccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhccCCC
Confidence            788899999999999999999999999999988777999999999988888888999999999999999999999754 4


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.+.+..|++..++..
T Consensus       184 i~v~~v~pG~v~t~~~  199 (239)
T PRK08703        184 LRANVLVPGPINSPQR  199 (239)
T ss_pred             eEEEEEecCcccCccc
Confidence            6677778888777653

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.8e-21  Score=145.81  Aligned_cols=159  Identities=17%  Similarity=0.132  Sum_probs=134.7

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~   69 (182)
                      ++|.++|+.+..+.+....            .+.++.++.+|++|++++.++++.+.+ ++++|++|||||.... +++.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~  104 (276)
T PRK05875         25 AGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPIT  104 (276)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChh
Confidence            4567788887777643211            135788899999999999999999988 9999999999997543 5667


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|..++++|+.+++.+++++.+.|.+++.++|+++||..+..+.++...|+++|++++.++++++.++....+.+
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v  184 (276)
T PRK05875        105 QIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRV  184 (276)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            78899999999999999999999999999887778999999998888878889999999999999999999998766677


Q ss_pred             eeeCCCccccccc
Q psy5462         150 TVTTPLRSVTILY  162 (182)
Q Consensus       150 ~v~~~~~~~~~~~  162 (182)
                      .+..|++..+...
T Consensus       185 ~~i~Pg~v~t~~~  197 (276)
T PRK05875        185 NSIRPGLIRTDLV  197 (276)
T ss_pred             EEEecCccCCccc
Confidence            7778887766654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.8e-22  Score=150.48  Aligned_cols=158  Identities=19%  Similarity=0.127  Sum_probs=126.5

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+.+...            ..+.++.++.+|++|.++++++++.+.+ ++++|++|||||...+.  ..
T Consensus        34 ~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~  111 (306)
T PRK06197         34 AALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQ  111 (306)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--Cc
Confidence            456778888766654321            1135688999999999999999999988 99999999999976442  34


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-------------ccCCCchhhhhHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-------------AAVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-------------~~~~~~~y~~sKaa~~~~~~~  137 (182)
                      .+.++++..+++|+.+++.+++.+++.|++.+.++||++||..+..             +.++...|+.+|+++..|++.
T Consensus       112 ~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  191 (306)
T PRK06197        112 TTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYE  191 (306)
T ss_pred             cCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHH
Confidence            5677899999999999999999999999887778999999976542             223457899999999999999


Q ss_pred             HHhhhCCCccceeee--CCCcccccccc
Q psy5462         138 IKCFSGYMLWGTTVT--TPLRSVTILYQ  163 (182)
Q Consensus       138 la~e~~~~~~~i~v~--~~~~~~~~~~~  163 (182)
                      ++.+++....++.++  +|+++.|....
T Consensus       192 la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        192 LQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             HHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence            999997655555555  69888877654

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.3e-21  Score=143.89  Aligned_cols=160  Identities=19%  Similarity=0.224  Sum_probs=134.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+..          ...+.+++++.+|+++++++.++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        27 ~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~  106 (258)
T PRK06949         27 QVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVT  106 (258)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCC
Confidence            44566777776665322          12245788999999999999999999988 99999999999987767777888


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--------CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN--------TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .++|+.++++|+.+++.+++++.+.|.++.        .++||++||..+..+.+....|+++|++++.++++++.++..
T Consensus       107 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~  186 (258)
T PRK06949        107 PADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGR  186 (258)
T ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999988654        479999999988878788899999999999999999999987


Q ss_pred             CccceeeeCCCcccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~  163 (182)
                      ..+.+.+..|++..++...
T Consensus       187 ~~i~v~~v~pG~v~t~~~~  205 (258)
T PRK06949        187 HGINVNAICPGYIDTEINH  205 (258)
T ss_pred             cCeEEEEEeeCCCcCCcch
Confidence            6667777788887776543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.9e-21  Score=145.20  Aligned_cols=160  Identities=24%  Similarity=0.252  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+++.....     .....++.||++|+++++++++.+.+ ++++|++|||||...+  .++.+.+.+.
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~  104 (255)
T PRK06057         25 RRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDA  104 (255)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHH
Confidence            45677888887776433210     11236889999999999999999988 8999999999997643  4566778899


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.+++.+++.++|+|++++.++||++||..+..+. ++...|+++|+++..+++.++.++....+.+.+..|
T Consensus       105 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~p  184 (255)
T PRK06057        105 WQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCP  184 (255)
T ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEee
Confidence            9999999999999999999999988778999999998776654 367889999999999999999999876677778889


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..++...
T Consensus       185 g~v~t~~~~  193 (255)
T PRK06057        185 GPVNTPLLQ  193 (255)
T ss_pred             CCcCCchhh
Confidence            888777643

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.4e-21  Score=142.35  Aligned_cols=161  Identities=22%  Similarity=0.218  Sum_probs=136.6

Q ss_pred             cccccccccceeccCC--------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWC--------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~--------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.+..+...              +...+.++.++.+|++|+++++++++.+.+ ++++|++|||+|.....++
T Consensus        24 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~  103 (249)
T PRK12827         24 VRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAF  103 (249)
T ss_pred             HHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence            4567788887775432              112245788999999999999999999988 8999999999999877778


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHh-HHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFL-PDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+.+.++|...+++|+.+++.+++++. +.+.+++.+++|++||..+..+.++...|+.+|++++.++++++.+++....
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i  183 (249)
T PRK12827        104 AELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGI  183 (249)
T ss_pred             ccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCc
Confidence            888999999999999999999999999 6666666789999999998888888999999999999999999999887677


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+.+..|++..++....
T Consensus       184 ~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        184 TVNAVAPGAINTPMADN  200 (249)
T ss_pred             EEEEEEECCcCCCcccc
Confidence            88888999887765443

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-21  Score=145.99  Aligned_cols=145  Identities=19%  Similarity=0.142  Sum_probs=117.1

Q ss_pred             ccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           9 HIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         9 ~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +|+.+..+++..          ...+.++.++.||++|++++.++++.+.+++++|++|||||...       ..++|+.
T Consensus        23 ~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~-------~~~~~~~   95 (275)
T PRK06940         23 AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSP-------SQASPEA   95 (275)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCC-------chhhHHH
Confidence            577777665322          12245788999999999999999998833899999999999742       2367999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------------------------CCCchhhhhH
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------------------------VNVSAYFASK  128 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------------------------~~~~~y~~sK  128 (182)
                      ++++|+.+++++++++.|.|.++  +++|+++|.++..+.                              +++..|++||
T Consensus        96 ~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK  173 (275)
T PRK06940         96 ILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAK  173 (275)
T ss_pred             HHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHHH
Confidence            99999999999999999998653  678999998876532                              2467899999


Q ss_pred             HHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         129 YGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       129 aa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      +|+..++++++.|++..++.++..+|++..|++.
T Consensus       174 aa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~  207 (275)
T PRK06940        174 RANALRVMAEAVKWGERGARINSISPGIISTPLA  207 (275)
T ss_pred             HHHHHHHHHHHHHHccCCeEEEEeccCcCcCccc
Confidence            9999999999999987666666668988888764

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.7e-21  Score=143.03  Aligned_cols=157  Identities=21%  Similarity=0.172  Sum_probs=131.7

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC---CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA---SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~---~~~~~   69 (182)
                      ++|.++|+.+..+.+...          ..+.++.++.+|++|.+++.++++.+.+ ++++|++|||||...   ..++.
T Consensus        24 ~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  103 (250)
T PRK07774         24 EALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLI  103 (250)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChh
Confidence            456778888887765432          1234678899999999999999999988 999999999999864   24566


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++++..+++|+.+++++++++++.|.+.+.++||++||..++.   +...|+++|++++.++++++.++...++.+
T Consensus       104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v  180 (250)
T PRK07774        104 TVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELGGMNIRV  180 (250)
T ss_pred             hCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            77899999999999999999999999999887789999999987754   357899999999999999999988666778


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      .+..|++..++...
T Consensus       181 ~~v~pg~~~t~~~~  194 (250)
T PRK07774        181 NAIAPGPIDTEATR  194 (250)
T ss_pred             EEEecCcccCcccc
Confidence            88888877766643

>KOG1611|consensus

Probab=99.87  E-value=4.4e-21  Score=136.13  Aligned_cols=142  Identities=23%  Similarity=0.206  Sum_probs=120.8

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHh-c--CCccEEEEcccCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHH
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRK-I--GYVDILINNAGIVAS-SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDM   98 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~-~--~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   98 (182)
                      ...+++.+++|+++.++++.+++++.+ -  ..+|++|+|||.... ....+.+.+.|-..+++|..++++++|+++|++
T Consensus        52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL  131 (249)
T KOG1611|consen   52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL  131 (249)
T ss_pred             cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence            367999999999999999999999998 3  369999999998764 556667788899999999999999999999999


Q ss_pred             HhCC-----------CCeEEEEeccccccc---cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462          99 LENN-----------TGHIVCISSIAALTA---AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus        99 ~~~~-----------~~~ii~iss~~~~~~---~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .+..           +..|||+||..+-.+   ..++.+|.+||+|++.|+|+++.|+.+..+-+.-.+|+|+.|.+...
T Consensus       132 kkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  132 KKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             HHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence            8643           348999988775442   24568999999999999999999999765666666999999988865

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=5e-21  Score=142.24  Aligned_cols=160  Identities=26%  Similarity=0.266  Sum_probs=135.4

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+....         .+.++.++.||++|++++.++++.+.+ ++++|++|||+|... ..++.+.+
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~  102 (251)
T PRK07231         23 RRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVD  102 (251)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCC
Confidence            4567788887777644321         135688999999999999999999988 999999999999854 34577789


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+.+|++++.+++.++.++...++.+...
T Consensus       103 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i  182 (251)
T PRK07231        103 EAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAV  182 (251)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            99999999999999999999999999887789999999999988888999999999999999999999998665666666


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..+....
T Consensus       183 ~pg~~~t~~~~  193 (251)
T PRK07231        183 APVVVETGLLE  193 (251)
T ss_pred             EECccCCCcch
Confidence            88877666533

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.1e-21  Score=141.86  Aligned_cols=158  Identities=14%  Similarity=0.063  Sum_probs=134.1

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...           ..+.++.+++||++|+++++++++.+..  ++|++|||+|......+.+.+
T Consensus        19 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~--~~d~vv~~ag~~~~~~~~~~~   96 (243)
T PRK07102         19 RRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA--LPDIVLIAVGTLGDQAACEAD   96 (243)
T ss_pred             HHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh--cCCEEEECCcCCCCcccccCC
Confidence            456778888777764332           1245789999999999999999988753  579999999987776777889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .+++...+++|+.+++++++++.++|.+++.++||++||..+..+.+....|+++|++++.++++++.|+....+.+...
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v  176 (243)
T PRK07102         97 PALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTV  176 (243)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            99999999999999999999999999888789999999998888888889999999999999999999998777777778


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..+....
T Consensus       177 ~pg~v~t~~~~  187 (243)
T PRK07102        177 KPGFVRTPMTA  187 (243)
T ss_pred             ecCcccChhhh
Confidence            88887776543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.3e-21  Score=162.07  Aligned_cols=161  Identities=25%  Similarity=0.243  Sum_probs=135.7

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC-
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~-   71 (182)
                      ++|.++|+.+..+++..          ...+.++.++.||++|.+++.++++.+.+ +|++|++|||||......+.+. 
T Consensus       389 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~  468 (657)
T PRK07201        389 IKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENST  468 (657)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcC
Confidence            45677788877765322          12356789999999999999999999988 9999999999998654444332 


Q ss_pred             -CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 -TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 -~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                       +.++++.++++|+.+++.+++.++|.|++++.++||++||.+++.+.+..+.|+++|++++.|+++++.|+....+.++
T Consensus       469 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  548 (657)
T PRK07201        469 DRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFT  548 (657)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence             3688999999999999999999999999888899999999998888888999999999999999999999987667777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|++...
T Consensus       549 ~v~pg~v~T~~~~~  562 (657)
T PRK07201        549 TIHMPLVRTPMIAP  562 (657)
T ss_pred             EEECCcCcccccCc
Confidence            78999888776543

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.6e-21  Score=141.62  Aligned_cols=157  Identities=18%  Similarity=0.119  Sum_probs=131.3

Q ss_pred             cccccccccceeccCCCC-----CCCceeEEEEccCCCHHHHHHHHHH-HHh-c---CCccEEEEcccCCCC-CCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----TKTHVAVYFKADVSDKAEIKKLNEN-VRK-I---GYVDILINNAGIVAS-SSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~D~s~~~~~~~~~~~-~~~-~---~~id~li~~ag~~~~-~~~~~~~   72 (182)
                      ++|.++|+.+..+++...     ..+.++.++.+|++|.++++++++. +.+ +   +++|++|||+|...+ .++.+.+
T Consensus        19 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~   98 (243)
T PRK07023         19 EQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLD   98 (243)
T ss_pred             HHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCC
Confidence            456778988877764322     2345788999999999999997776 554 4   379999999998654 5677788


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++++.+++.++.+ ....+.+.+.
T Consensus        99 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v  177 (243)
T PRK07023         99 AAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSL  177 (243)
T ss_pred             HHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEe
Confidence            999999999999999999999999998877799999999999888889999999999999999999999 5555677777


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      +|++..++.
T Consensus       178 ~pg~~~t~~  186 (243)
T PRK07023        178 APGVVDTGM  186 (243)
T ss_pred             cCCccccHH
Confidence            888877664

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.87  E-value=8.7e-21  Score=145.75  Aligned_cols=160  Identities=13%  Similarity=0.065  Sum_probs=124.5

Q ss_pred             ccccccc-ccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHI-HGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|.++| +.+....+..          ...+.++.++.||++|.++++++++.+.+ ++++|++|||||...+ ....+
T Consensus        21 ~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~  100 (314)
T TIGR01289        21 KALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPR  100 (314)
T ss_pred             HHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccc
Confidence            4566778 7776654321          12345678899999999999999999988 8999999999997543 23345


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccc-------------------------------
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTA-------------------------------  117 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~-------------------------------  117 (182)
                      .+.++|+.++++|+.+++.+++.++|.|++++  .++||++||.++..+                               
T Consensus       101 ~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (314)
T TIGR01289       101 FTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDG  180 (314)
T ss_pred             cCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCC
Confidence            68899999999999999999999999998764  489999999876421                               


Q ss_pred             --cCCCchhhhhHHHHHHHHHHHHhhhC-CCccceeeeCCCcc-cccccc
Q psy5462         118 --AVNVSAYFASKYGVTENHPSIKCFSG-YMLWGTTVTTPLRS-VTILYQ  163 (182)
Q Consensus       118 --~~~~~~y~~sKaa~~~~~~~la~e~~-~~~~~i~v~~~~~~-~~~~~~  163 (182)
                        ..+...|++||+++..+++.+++++. ..++.+...+|+++ .|++..
T Consensus       181 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~  230 (314)
T TIGR01289       181 KEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFR  230 (314)
T ss_pred             CCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccc
Confidence              12346799999999999999999985 23456666688876 466543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.8e-21  Score=142.34  Aligned_cols=157  Identities=22%  Similarity=0.210  Sum_probs=131.1

Q ss_pred             cccccccccceecc-CCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-c------CCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIP-WCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-I------GYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~------~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.+.+.. +..          ...+.++.++.+|++|++++.++++.+.+ +      +++|++|||||...+
T Consensus        24 ~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~  103 (254)
T PRK12746         24 MRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQ  103 (254)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCC
Confidence            45677888876642 221          12245788999999999999999999887 6      469999999998777


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      +.+.+.+.+.|+.++++|+.+++++++.+.+.|.+  .+++|++||..++.+.++...|+++|++++.++++++.++...
T Consensus       104 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~  181 (254)
T PRK12746        104 GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGER  181 (254)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhc
Confidence            77788899999999999999999999999998865  3799999999888888889999999999999999999998866


Q ss_pred             ccceeeeCCCccccccc
Q psy5462         146 LWGTTVTTPLRSVTILY  162 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~  162 (182)
                      ...+....|++..++..
T Consensus       182 ~i~v~~v~pg~~~t~~~  198 (254)
T PRK12746        182 GITVNTIMPGYTKTDIN  198 (254)
T ss_pred             CcEEEEEEECCccCcch
Confidence            66677778887766654

>PRK06196 oxidoreductase; Provisional

Probab=99.86  E-value=2.5e-21  Score=148.83  Aligned_cols=158  Identities=16%  Similarity=0.102  Sum_probs=127.9

Q ss_pred             cccccccccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.+..+.+.....      -.++.++.+|++|.++++++++.+.+ ++++|++|||||.....  ...+.++|
T Consensus        44 ~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~  121 (315)
T PRK06196         44 RALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACP--ETRVGDGW  121 (315)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC--CccCCccH
Confidence            45777888887776443211      12378899999999999999999988 89999999999975432  34567789


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc------------ccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT------------AAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      +..+++|+.+++.++++++|.|++++.++||++||..+..            +.++...|+.+|+++..+++.++.++..
T Consensus       122 ~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~  201 (315)
T PRK06196        122 EAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKD  201 (315)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999887778999999976532            2334578999999999999999999987


Q ss_pred             CccceeeeCCCcccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~  163 (182)
                      .++.+++..|++..++...
T Consensus       202 ~gi~v~~v~PG~v~t~~~~  220 (315)
T PRK06196        202 QGVRAFSVHPGGILTPLQR  220 (315)
T ss_pred             CCcEEEEeeCCcccCCccc
Confidence            6677777799988877643

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=7.8e-21  Score=140.82  Aligned_cols=160  Identities=29%  Similarity=0.291  Sum_probs=136.1

Q ss_pred             cccccccccceec-cCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFI-PWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+++..+ .+...          ..+.++.++.+|++|++++.++++.+.+ ++++|++||++|.....++.+.
T Consensus        23 ~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  102 (247)
T PRK05565         23 ELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDM  102 (247)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhC
Confidence            3466778888777 53321          1245688999999999999999999988 8999999999998866677788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++++..+++|+.+++++.+.+.+.+.+++.+++|++||..+..+.+....|+.+|++++.++++++.++......+.+
T Consensus       103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~  182 (247)
T PRK05565        103 TDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNA  182 (247)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            99999999999999999999999999988878999999999888888888999999999999999999998766667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..+....
T Consensus       183 v~pg~v~t~~~~  194 (247)
T PRK05565        183 VAPGAIDTEMWS  194 (247)
T ss_pred             EEECCccCcccc
Confidence            788877665443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.86  E-value=1.2e-20  Score=140.23  Aligned_cols=160  Identities=24%  Similarity=0.262  Sum_probs=137.2

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+..          ...+.++.++.+|++|++++.++++.+.+ ++++|++|||+|.....++.+.+
T Consensus        24 ~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~  103 (251)
T PRK12826         24 VRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMD  103 (251)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCC
Confidence            45677888887776542          22345688999999999999999999988 99999999999988777777889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++++..+++|+.+++.+.+.+.+.|.+++.++||++||..+. .+.+....|+++|++++.+++.++.++...+..+.+
T Consensus       104 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~  183 (251)
T PRK12826        104 DEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNS  183 (251)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            9999999999999999999999999988778899999999887 677888999999999999999999998766667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       184 i~pg~~~~~~~~  195 (251)
T PRK12826        184 VHPGGVDTPMAG  195 (251)
T ss_pred             EeeCCCCcchhh
Confidence            788877666543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4e-21  Score=140.91  Aligned_cols=150  Identities=15%  Similarity=0.064  Sum_probs=117.0

Q ss_pred             cccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCC------CCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVAS------SSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~------~~~~~~~   72 (182)
                      ++|.++|+.+...++....     ...++.++.||++|+++++++++.+.  +++|++|||+|....      ..+.+ +
T Consensus        18 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~id~lv~~ag~~~~~~~~~~~~~~~-~   94 (223)
T PRK05884         18 EGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP--HHLDTIVNVPAPSWDAGDPRTYSLAD-T   94 (223)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh--hcCcEEEECCCccccCCCCcccchhc-C
Confidence            4566778888777543211     11136788999999999999988764  369999999985321      12333 5


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|++++++|+.+++++++++.|.|++  +|+||++||.+    .+....|+++|+|+.+|+++++.|+++.++.+...
T Consensus        95 ~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v  168 (223)
T PRK05884         95 ANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAV  168 (223)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            7899999999999999999999999964  48999999976    24568999999999999999999999766667777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      +|++..++..
T Consensus       169 ~PG~v~t~~~  178 (223)
T PRK05884        169 ACGRSVQPGY  178 (223)
T ss_pred             ecCccCchhh
Confidence            8888777654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=9.5e-21  Score=140.30  Aligned_cols=161  Identities=25%  Similarity=0.283  Sum_probs=137.3

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+...           +...+.++.++.+|++|++++.++++.+.+ ++++|++||++|...+..+.+.
T Consensus        24 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  103 (249)
T PRK12825         24 LRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADM  103 (249)
T ss_pred             HHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhC
Confidence            3567788887553322           123356788999999999999999999988 8999999999998777777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++++..+++|+.+++++++.+.+++++.+.+++|++||..+..+.+....|+.+|++++.+++.++.++......+.+
T Consensus       104 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~  183 (249)
T PRK12825        104 SDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNM  183 (249)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            89999999999999999999999999988878899999999988888888999999999999999999998766677888


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      ..|++..++....
T Consensus       184 i~pg~~~~~~~~~  196 (249)
T PRK12825        184 VAPGDIDTDMKEA  196 (249)
T ss_pred             EEECCccCCcccc
Confidence            8888877766543

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.86  E-value=1.3e-20  Score=140.24  Aligned_cols=156  Identities=26%  Similarity=0.268  Sum_probs=129.2

Q ss_pred             ccccccccceeccCCCCC---------CC----ceeEEEEccCCC-HHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCc
Q psy5462           5 RTTGHIHGILFIPWCLPT---------KT----HVAVYFKADVSD-KAEIKKLNENVRK-IGYVDILINNAGIVAS-SSV   68 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~---------~~----~~~~~~~~D~s~-~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~   68 (182)
                      .|.++|+.+.........         ..    ..+.+..+|+++ .++++.+++.+.+ +|++|++|||||.... .++
T Consensus        24 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~  103 (251)
T COG1028          24 ALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPL  103 (251)
T ss_pred             HHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCh
Confidence            445667776555433211         11    367888899998 9999999999999 9999999999999887 488


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+.+.++|+.++++|+.+++.+++.+.|.+.++   +||++||..+. +.++ +..|++||+|+.+|+++++.|+.+.++
T Consensus       104 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi  179 (251)
T COG1028         104 EELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELAPRGI  179 (251)
T ss_pred             hhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCc
Confidence            899999999999999999999999888888743   99999999998 7777 499999999999999999999887666


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+...+|+...|+....
T Consensus       180 ~v~~v~PG~~~t~~~~~  196 (251)
T COG1028         180 RVNAVAPGYIDTPMTAA  196 (251)
T ss_pred             EEEEEEeccCCCcchhh
Confidence            77777888766666553

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=9.2e-21  Score=140.97  Aligned_cols=156  Identities=24%  Similarity=0.178  Sum_probs=131.2

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+......-           ...+.++.++.+|+++++++.++++.+.+ ++++|++|||||...+.++.+.
T Consensus        24 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~  103 (252)
T PRK06077         24 VRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNV  103 (252)
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            45677788765543211           12245678899999999999999999999 9999999999998777777888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++++..+++|+.+++.+++++.+++++  .++||++||..++.+.++...|+++|++++.++++++.|++. .+.+.+
T Consensus       104 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~  180 (252)
T PRK06077        104 DDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNA  180 (252)
T ss_pred             CHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEE
Confidence            89999999999999999999999999865  479999999999888889999999999999999999999876 556666


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..+...
T Consensus       181 v~Pg~i~t~~~  191 (252)
T PRK06077        181 IAPGFVKTKLG  191 (252)
T ss_pred             EeeCCccChHH
Confidence            78887766653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=139.21  Aligned_cols=158  Identities=15%  Similarity=0.190  Sum_probs=132.3

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccCC--CHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADVS--DKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~s--~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~   68 (182)
                      ++|.++|+.+..+++...          . .+.++.++.+|++  +++++.++++.+.+ ++++|++|||||.... .++
T Consensus        30 ~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~  109 (247)
T PRK08945         30 LTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPM  109 (247)
T ss_pred             HHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCc
Confidence            456777888877764321          1 2346777888886  78999999999998 9999999999998654 456


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.+.|+..+++|+.+++++++++.++|++++.++||++||..+..+.+....|+++|++++.+++.++.++....+.
T Consensus       110 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~  189 (247)
T PRK08945        110 EQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLR  189 (247)
T ss_pred             ccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEE
Confidence            77788999999999999999999999999998888999999999988888889999999999999999999998876667


Q ss_pred             eeeeCCCcccccc
Q psy5462         149 TTVTTPLRSVTIL  161 (182)
Q Consensus       149 i~v~~~~~~~~~~  161 (182)
                      +++..|++..+..
T Consensus       190 ~~~v~pg~v~t~~  202 (247)
T PRK08945        190 VNCINPGGTRTAM  202 (247)
T ss_pred             EEEEecCCccCcc
Confidence            7777888776553

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2e-20  Score=140.19  Aligned_cols=157  Identities=27%  Similarity=0.254  Sum_probs=132.7

Q ss_pred             ccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC-C
Q psy5462           5 RTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-T   72 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~-~   72 (182)
                      +|.++|+.+..+.+..          ...+.++.++.+|++|++++..+++.+.+ ++++|++|||+|......+.+. +
T Consensus        20 ~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   99 (263)
T PRK06181         20 RLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTD   99 (263)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCC
Confidence            4567777777665432          12355788999999999999999999988 9999999999998877777777 8


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .+++...+++|+.+++.+++.+.++|.+. .++||++||..+..+.++...|+++|++++.++++++.++......+.+.
T Consensus       100 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i  178 (263)
T PRK06181        100 LSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV  178 (263)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEE
Confidence            99999999999999999999999988764 48999999999888888889999999999999999999988666667777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..+...
T Consensus       179 ~pg~v~t~~~  188 (263)
T PRK06181        179 CPGFVATDIR  188 (263)
T ss_pred             ecCccccCcc
Confidence            8877666543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.86  E-value=2e-20  Score=137.98  Aligned_cols=159  Identities=23%  Similarity=0.274  Sum_probs=134.6

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+++..+.+..           ...+.+++++.+|++|+++++++++.+.+ ++++|++||++|......+.+.
T Consensus        16 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   95 (239)
T TIGR01830        16 LKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRM   95 (239)
T ss_pred             HHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence            46777888887775432           12244688999999999999999999988 8999999999998766666677


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.+.++..+++|+.+++.+++.+.+++.+.+.+++|++||..+..+.+....|+++|++++.+++.++.++......+++
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~  175 (239)
T TIGR01830        96 KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNA  175 (239)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            88999999999999999999999999887777899999999888888889999999999999999999998766667777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..+...
T Consensus       176 i~pg~~~~~~~  186 (239)
T TIGR01830       176 VAPGFIDTDMT  186 (239)
T ss_pred             EEECCCCChhh
Confidence            78877655443

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.86  E-value=3.3e-21  Score=142.89  Aligned_cols=147  Identities=20%  Similarity=0.192  Sum_probs=120.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.+..+++..... ....+++||++|.++++++++.+.  +++|++|||||....        +.++..+++|
T Consensus         3 ~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~--~~iD~li~nAG~~~~--------~~~~~~~~vN   71 (241)
T PRK12428          3 RLLRFLGARVIGVDRREPGM-TLDGFIQADLGDPASIDAAVAALP--GRIDALFNIAGVPGT--------APVELVARVN   71 (241)
T ss_pred             HHHHhCCCEEEEEeCCcchh-hhhHhhcccCCCHHHHHHHHHHhc--CCCeEEEECCCCCCC--------CCHHHhhhhc
Confidence            46778899988887654322 234578999999999999988764  689999999997532        2478899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEecccccc---------------------------ccCCCchhhhhHHHHHHHHH
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALT---------------------------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~---------------------------~~~~~~~y~~sKaa~~~~~~  136 (182)
                      +.+++.+++.++|+|.+  .|+||++||.+++.                           +.++...|+++|+++..+++
T Consensus        72 ~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~  149 (241)
T PRK12428         72 FLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTM  149 (241)
T ss_pred             hHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHH
Confidence            99999999999999864  48999999988762                           45667899999999999999


Q ss_pred             HHH-hhhCCCccceeeeCCCcccccccc
Q psy5462         137 SIK-CFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       137 ~la-~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      +++ .|++..++.+++.+|++..|++..
T Consensus       150 ~la~~e~~~~girvn~v~PG~v~T~~~~  177 (241)
T PRK12428        150 RQAQPWFGARGIRVNCVAPGPVFTPILG  177 (241)
T ss_pred             HHHHHhhhccCeEEEEeecCCccCcccc
Confidence            999 999876677777799988887654

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=5.3e-20  Score=136.29  Aligned_cols=160  Identities=23%  Similarity=0.280  Sum_probs=135.7

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.++.....           ..+.++.++.+|+++++++.++++.+.+ ++++|++||++|.....++.+.
T Consensus        23 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~  102 (248)
T PRK05557         23 ERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRM  102 (248)
T ss_pred             HHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccC
Confidence            456778888866653322           2356788999999999999999999988 8999999999998877777778


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.+.++..+++|+.+++.+.+++.+.+.+.+.+++|++||..+..+.+....|+++|++++.+++.++.++......+.+
T Consensus       103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~  182 (248)
T PRK05557        103 KEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNA  182 (248)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            89999999999999999999999999988777899999999888888888999999999999999999998766667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..+....
T Consensus       183 v~pg~~~~~~~~  194 (248)
T PRK05557        183 VAPGFIETDMTD  194 (248)
T ss_pred             EecCccCCcccc
Confidence            788876655443

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=139.77  Aligned_cols=159  Identities=19%  Similarity=0.174  Sum_probs=129.0

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCC--cc--EEEEcccCCCC-CCcc
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGY--VD--ILINNAGIVAS-SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~--id--~li~~ag~~~~-~~~~   69 (182)
                      ++|.++|+.+..+.+..        ...+.+++++.+|++|+++++++++.+.+ ++.  ++  ++|+|+|...+ .++.
T Consensus        19 ~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~   98 (251)
T PRK06924         19 NQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIE   98 (251)
T ss_pred             HHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccc
Confidence            45677888887776543        12356788999999999999999999877 653  22  88999998644 5677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC--Cc
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY--ML  146 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~--~~  146 (182)
                      +.+.++|...+++|+.+++.+++.++++|++.+ .++||++||..+..+.++...|+++|++++.+++.++.|++.  ..
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~  178 (251)
T PRK06924         99 KAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYP  178 (251)
T ss_pred             cCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCC
Confidence            889999999999999999999999999998753 579999999988888888999999999999999999999763  33


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.+....|++..++..
T Consensus       179 i~v~~v~Pg~v~t~~~  194 (251)
T PRK06924        179 VKIVAFSPGVMDTNMQ  194 (251)
T ss_pred             eEEEEecCCccccHhH
Confidence            4444447887776653

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-20  Score=139.89  Aligned_cols=156  Identities=17%  Similarity=0.053  Sum_probs=128.1

Q ss_pred             cccccccccceeccCCC------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCL------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+..+++..      ...+.++.++.||++|+++++++++.+.  ..+|.+|||||........+.+.++|+
T Consensus        19 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~d~~i~~ag~~~~~~~~~~~~~~~~   96 (240)
T PRK06101         19 LDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP--FIPELWIFNAGDCEYMDDGKVDATLMA   96 (240)
T ss_pred             HHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc--cCCCEEEEcCcccccCCCCCCCHHHHH
Confidence            46778888887776432      1223568899999999999999988764  347999999987544444457889999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .++++|+.+++++++++.|+|.+  +++||++||..+..+.+....|+++|++++.++++++.|+....+.+....|++.
T Consensus        97 ~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i  174 (240)
T PRK06101         97 RVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFV  174 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcC
Confidence            99999999999999999999854  4689999999888888889999999999999999999999877677777788887


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .++..+
T Consensus       175 ~t~~~~  180 (240)
T PRK06101        175 ATPLTD  180 (240)
T ss_pred             CCCCcC
Confidence            776544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.85  E-value=1.9e-20  Score=156.38  Aligned_cols=154  Identities=28%  Similarity=0.269  Sum_probs=131.1

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..++.....            ...++..+.||++|++++.++++.+.+ +|++|++|||||.....++.+
T Consensus       432 ~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~  511 (676)
T TIGR02632       432 RRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEE  511 (676)
T ss_pred             HHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCccc
Confidence            4577788888777643210            123677899999999999999999988 999999999999877777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...|+++|++++.++++++.|++..++.+
T Consensus       512 ~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrV  591 (676)
T TIGR02632       512 TTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRV  591 (676)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            89999999999999999999999999998765 57999999999888888999999999999999999999998665555


Q ss_pred             eeeCCCcc
Q psy5462         150 TVTTPLRS  157 (182)
Q Consensus       150 ~v~~~~~~  157 (182)
                      +..+|+.+
T Consensus       592 n~V~Pg~V  599 (676)
T TIGR02632       592 NTVNPDAV  599 (676)
T ss_pred             EEEECCce
Confidence            55577654

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.85  E-value=4.8e-20  Score=136.69  Aligned_cols=159  Identities=20%  Similarity=0.138  Sum_probs=130.3

Q ss_pred             cccccccccceecc-CC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCccc
Q psy5462           4 DRTTGHIHGILFIP-WC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~   70 (182)
                      ++|.++|+.+..+. +.          +...+.++..+.||++|+++++++++.+.+ ++++|++|||+|... ..++.+
T Consensus        19 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   98 (247)
T PRK09730         19 LLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVEN   98 (247)
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccc
Confidence            45677888876532 11          112245788999999999999999999988 999999999999763 356677


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .+.++|+..+++|+.+++.+++++++.+.++.   +++||++||..+..+.+. +..|+++|++++.++++++.++....
T Consensus        99 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~  178 (247)
T PRK09730         99 LTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQG  178 (247)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhC
Confidence            88999999999999999999999999988753   578999999888777664 46899999999999999999987666


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      ..+.+..|++..++..
T Consensus       179 i~v~~i~pg~~~~~~~  194 (247)
T PRK09730        179 IRVNCVRPGFIYTEMH  194 (247)
T ss_pred             eEEEEEEeCCCcCccc
Confidence            6777778888777653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=5e-20  Score=136.96  Aligned_cols=159  Identities=22%  Similarity=0.210  Sum_probs=129.1

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc----
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV----   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~----   68 (182)
                      +++.++|+.+..++...          ...+.++.++.+|+++++++.++++.+.+ ++++|++|||+|......+    
T Consensus        23 ~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  102 (253)
T PRK08217         23 EYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAK  102 (253)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccc
Confidence            34667788776665332          12356788999999999999999999988 8999999999997543221    


Q ss_pred             -----ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          69 -----LAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        69 -----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                           .+.+.++|+.++++|+.+++++.+.+.+.|.++ ..+.||++||.. ..+.++...|+++|++++.++++++.++
T Consensus       103 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~  181 (253)
T PRK08217        103 DGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKEL  181 (253)
T ss_pred             cccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence                 566889999999999999999999999999876 457899998865 4566788999999999999999999998


Q ss_pred             CCCccceeeeCCCcccccccc
Q psy5462         143 GYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       143 ~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      ....+.+....|++..++...
T Consensus       182 ~~~~i~v~~v~pg~v~t~~~~  202 (253)
T PRK08217        182 ARYGIRVAAIAPGVIETEMTA  202 (253)
T ss_pred             HHcCcEEEEEeeCCCcCcccc
Confidence            766677777788887766543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.85  E-value=5.1e-20  Score=137.16  Aligned_cols=158  Identities=24%  Similarity=0.254  Sum_probs=134.7

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...          ..+.++.++.+|++|++++..+++.+.+ ++++|++|||+|........+.+
T Consensus        19 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~   98 (255)
T TIGR01963        19 LALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFP   98 (255)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCC
Confidence            466778888777764321          2245788999999999999999999988 89999999999987766667778


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      +++++.++++|+.+++.+++.+++.|++.+.+++|++||..+..+.+....|+.+|++++.+++.++.++......+.+.
T Consensus        99 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i  178 (255)
T TIGR01963        99 PEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAI  178 (255)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            99999999999999999999999999887778999999988888888889999999999999999999987656677777


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      .|++..++.
T Consensus       179 ~pg~v~~~~  187 (255)
T TIGR01963       179 CPGYVRTPL  187 (255)
T ss_pred             ecCccccHH
Confidence            888766554

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.9e-20  Score=137.19  Aligned_cols=158  Identities=21%  Similarity=0.217  Sum_probs=132.4

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+.+....         ...+++++.+|++|++++..+++.+.+ ++++|++||++|....+++.+.+.
T Consensus        24 ~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~  103 (237)
T PRK07326         24 EALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTP  103 (237)
T ss_pred             HHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCH
Confidence            3566778887777643211         015688999999999999999999988 899999999999877777778899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++++..+++|+.+++.+++++++.+ +++.++||++||..+..+......|+++|+++..+++.++.|+...+..+.+..
T Consensus       104 ~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~  182 (237)
T PRK07326        104 EEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIM  182 (237)
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEe
Confidence            9999999999999999999999988 444689999999988777778889999999999999999999887667777778


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..+...
T Consensus       183 pg~~~t~~~  191 (237)
T PRK07326        183 PGSVATHFN  191 (237)
T ss_pred             eccccCccc
Confidence            887766544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4e-20  Score=138.11  Aligned_cols=159  Identities=22%  Similarity=0.217  Sum_probs=132.4

Q ss_pred             cccccccccceeccCCCCC--------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT--------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+.+....        .+.++.++.+|++|++++..+++.+.+ ++++|++|||+|...+.++.+.+.+
T Consensus        20 ~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~   99 (257)
T PRK07074         20 RRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPA   99 (257)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence            4566778888777643221        234688999999999999999999888 9999999999998777677778899


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|...+++|+.+++.+.+++.+.+.+++.++||++||..+..+ .+...|+.+|++++.++++++.++...++.+.+..|
T Consensus       100 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~p  178 (257)
T PRK07074        100 SWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAP  178 (257)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEe
Confidence            9999999999999999999999998877899999999776543 356789999999999999999999866666777788


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..+....
T Consensus       179 g~v~t~~~~  187 (257)
T PRK07074        179 GTVKTQAWE  187 (257)
T ss_pred             CcCCcchhh
Confidence            877776543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.9e-20  Score=149.31  Aligned_cols=160  Identities=17%  Similarity=0.205  Sum_probs=134.0

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..++.....       ......++.||++|+++++++++.+.+ ++++|++|||||......+.+.+.++
T Consensus       228 ~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~  307 (450)
T PRK08261        228 EVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEAR  307 (450)
T ss_pred             HHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHH
Confidence            4566778887776542110       011245789999999999999999988 99999999999988777788889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.+++++++++.+.+..++.++||++||.++..+.+....|+++|++++.|+++++.|+....+.++...|+
T Consensus       308 ~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG  387 (450)
T PRK08261        308 WDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPG  387 (450)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeC
Confidence            99999999999999999999976555678999999999888888899999999999999999999998776777777888


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      ...+.+..
T Consensus       388 ~i~t~~~~  395 (450)
T PRK08261        388 FIETQMTA  395 (450)
T ss_pred             cCcchhhh
Confidence            87765543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.85  E-value=5.3e-20  Score=135.72  Aligned_cols=137  Identities=20%  Similarity=0.210  Sum_probs=111.7

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCC------CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHH
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVAS------SSVLAHTDHEIERIMDVNLMSNIKMVREFLPD   97 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   97 (182)
                      +.++.+++||+++.++++++.+.   ++++|++|||||....      ..+.+.+.+.|...+++|+.+++.+++.+.|.
T Consensus        42 ~~~~~~~~~Dls~~~~~~~~~~~---~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  118 (235)
T PRK09009         42 HDNVQWHALDVTDEAEIKQLSEQ---FTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK  118 (235)
T ss_pred             cCceEEEEecCCCHHHHHHHHHh---cCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            35788999999999999886443   5889999999998742      34667888999999999999999999999999


Q ss_pred             HHhCCCCeEEEEecccccc---ccCCCchhhhhHHHHHHHHHHHHhhhCCC--ccceeeeCCCcccccccc
Q psy5462          98 MLENNTGHIVCISSIAALT---AAVNVSAYFASKYGVTENHPSIKCFSGYM--LWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus        98 l~~~~~~~ii~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~~~i~v~~~~~~~~~~~~  163 (182)
                      |++++.++++++||..+..   +.+++..|+++|++++.|+++|+.|+...  .+.+.+..|++..|+...
T Consensus       119 ~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~  189 (235)
T PRK09009        119 LKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK  189 (235)
T ss_pred             ccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc
Confidence            9877678999998765422   34567799999999999999999998753  344555688887777643

>PRK12742 oxidoreductase; Provisional

Probab=99.84  E-value=5.2e-20  Score=135.83  Aligned_cols=155  Identities=21%  Similarity=0.193  Sum_probs=123.9

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+........+      ....+.++.+|++|.+++.++++.   ++++|++|||||........+.+.++|+
T Consensus        24 ~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~---~~~id~li~~ag~~~~~~~~~~~~~~~~  100 (237)
T PRK12742         24 RRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRK---SGALDILVVNAGIAVFGDALELDADDID  100 (237)
T ss_pred             HHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHH---hCCCcEEEECCCCCCCCCcccCCHHHHH
Confidence            4566778877654321110      011356788999999988877654   4789999999998766667778999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      .++++|+.+++.+++.+.++|.+  .++||++||..+. .+.++...|+++|++++.++++++.+++...+.+++..|++
T Consensus       101 ~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~  178 (237)
T PRK12742        101 RLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGP  178 (237)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCc
Confidence            99999999999999999998854  5899999998873 56778899999999999999999999987666777778988


Q ss_pred             ccccccc
Q psy5462         157 SVTILYQ  163 (182)
Q Consensus       157 ~~~~~~~  163 (182)
                      ..++...
T Consensus       179 ~~t~~~~  185 (237)
T PRK12742        179 IDTDANP  185 (237)
T ss_pred             ccCCccc
Confidence            8877643

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.84  E-value=8e-20  Score=135.17  Aligned_cols=160  Identities=26%  Similarity=0.291  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+.+...          ..+.++.++.+|++|++++.++++.+.+ ++++|++||++|.....++.+.+
T Consensus        23 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~  102 (246)
T PRK05653         23 LRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMS  102 (246)
T ss_pred             HHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCC
Confidence            356678888777664432          2356788999999999999999999988 89999999999987777777788


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++++..++.|+.+++++++++.+++.+.+.++||++||..+..+.++...|+.+|++++.++++++.++......+.+.
T Consensus       103 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i  182 (246)
T PRK05653        103 EEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAV  182 (246)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            99999999999999999999999999887778999999988877878889999999999999999999987666677777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|+...++...
T Consensus       183 ~pg~~~~~~~~  193 (246)
T PRK05653        183 APGFIDTDMTE  193 (246)
T ss_pred             EeCCcCCcchh
Confidence            88876665543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.84  E-value=8.6e-20  Score=134.79  Aligned_cols=156  Identities=22%  Similarity=0.193  Sum_probs=131.4

Q ss_pred             cccccccc-cceeccCCCCC---CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccC-CCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIH-GILFIPWCLPT---KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGI-VASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~-~v~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~-~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+ .+..+.+....   .+.++.++.+|++|.+++.++++..   +++|++||++|. .....+.+.+.+++..
T Consensus        24 ~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi~~ag~~~~~~~~~~~~~~~~~~  100 (238)
T PRK08264         24 EQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAA---SDVTILVNNAGIFRTGSLLLEGDEDALRA  100 (238)
T ss_pred             HHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhc---CCCCEEEECCCcCCCCCccccCCHHHHHH
Confidence            45677888 77777644322   3467889999999999998887764   689999999998 5556677889999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      .+++|+.+++.+.+++.+.+++.+.+++|++||..++.+.++...|+.+|++++.+++.++.++......+.+..|+...
T Consensus       101 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~  180 (238)
T PRK08264        101 EMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPID  180 (238)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccc
Confidence            99999999999999999999887789999999998888888889999999999999999999998666677777888776


Q ss_pred             cccc
Q psy5462         159 TILY  162 (182)
Q Consensus       159 ~~~~  162 (182)
                      +...
T Consensus       181 t~~~  184 (238)
T PRK08264        181 TDMA  184 (238)
T ss_pred             cccc
Confidence            6643

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.84  E-value=1e-19  Score=140.29  Aligned_cols=158  Identities=14%  Similarity=0.067  Sum_probs=123.0

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~   71 (182)
                      ++|.++|+.|..+++..          ...+.++.++.+|++|.++++++++.+.+ ++++|+||||||.... ....+.
T Consensus        24 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~  103 (322)
T PRK07453         24 KALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLR  103 (322)
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCC
Confidence            45677888877765322          12245788999999999999999999877 7789999999997643 233456


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC--CeEEEEecccccc---------------------------------
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNT--GHIVCISSIAALT---------------------------------  116 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~iss~~~~~---------------------------------  116 (182)
                      +.++|+..+++|+.++++++++++|+|++.+.  ++||++||.....                                 
T Consensus       104 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (322)
T PRK07453        104 SPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMAD  183 (322)
T ss_pred             CHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccC
Confidence            88999999999999999999999999987653  6999999965421                                 


Q ss_pred             --ccCCCchhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcc-cccc
Q psy5462         117 --AAVNVSAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRS-VTIL  161 (182)
Q Consensus       117 --~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~-~~~~  161 (182)
                        +..+...|+.||.+...+++.+++++.. .++.+...+|+++ .|..
T Consensus       184 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        184 GKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL  232 (322)
T ss_pred             ccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence              0123468999999999999999999853 3456667788876 3544

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.1e-20  Score=135.86  Aligned_cols=151  Identities=13%  Similarity=0.055  Sum_probs=124.4

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+.+...         ..+.+++++.||++|++++.++++.+   +++|++|||+|....+++.+.+.+
T Consensus        15 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~id~li~~ag~~~~~~~~~~~~~   91 (230)
T PRK07041         15 RAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA---GPFDHVVITAADTPGGPVRALPLA   91 (230)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc---CCCCEEEECCCCCCCCChhhCCHH
Confidence            456677888777654311         11467889999999999999988765   789999999998877778888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +++.++++|+.+++++++  .+.+.  +.++||++||..++.+.++...|+++|+++++++++++.|+..  ..+++.+|
T Consensus        92 ~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~p  165 (230)
T PRK07041         92 AAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSP  165 (230)
T ss_pred             HHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEee
Confidence            999999999999999999  33443  4689999999999888888999999999999999999999874  56777788


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..++...
T Consensus       166 g~~~t~~~~  174 (230)
T PRK07041        166 GLVDTPLWS  174 (230)
T ss_pred             cccccHHHH
Confidence            887776543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=9.3e-20  Score=152.75  Aligned_cols=159  Identities=23%  Similarity=0.208  Sum_probs=135.7

Q ss_pred             cccccccccceeccCCCCC-------CC--ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KT--HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~--~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..++.....       .+  .++.++.||++|++++.++++.+.+ +|++|++|||||....+++.+.+.
T Consensus       440 ~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~  519 (681)
T PRK08324        440 KRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSD  519 (681)
T ss_pred             HHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCH
Confidence            4566778877776533211       11  3788999999999999999999988 999999999999988888888999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      ++|+..+++|+.+++.+++++.+.|++++. |+||++||..+..+.++...|+++|++++.++++++.+++..++.+++.
T Consensus       520 ~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v  599 (681)
T PRK08324        520 EDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGV  599 (681)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            999999999999999999999999988764 8999999999888888999999999999999999999998766677777


Q ss_pred             CCCcc--ccccc
Q psy5462         153 TPLRS--VTILY  162 (182)
Q Consensus       153 ~~~~~--~~~~~  162 (182)
                      +|++.  .+..+
T Consensus       600 ~Pg~v~~~t~~~  611 (681)
T PRK08324        600 NPDAVVRGSGIW  611 (681)
T ss_pred             eCceeecCCccc
Confidence            88877  45443

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=135.68  Aligned_cols=154  Identities=20%  Similarity=0.213  Sum_probs=129.2

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+.+..          ...+.++.++.+|++|++++.++++     +++|++|||||....+++.+.+.
T Consensus        20 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-----~~id~vi~~ag~~~~~~~~~~~~   94 (257)
T PRK09291         20 LRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-----WDVDVLLNNAGIGEAGAVVDIPV   94 (257)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-----CCCCEEEECCCcCCCcCcccCCH
Confidence            45667788877665432          1234568899999999998877654     36999999999988788888999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++++..+++|+.+++.+++.+++.+++.+.++||++||..+..+.++...|+++|++++.+++.++.++...++.+.+..
T Consensus        95 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~  174 (257)
T PRK09291         95 ELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVN  174 (257)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence            99999999999999999999999998877799999999988887788899999999999999999999887667778888


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..+.+.
T Consensus       175 pg~~~t~~~  183 (257)
T PRK09291        175 PGPYLTGFN  183 (257)
T ss_pred             cCcccccch
Confidence            887766543

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.9e-19  Score=132.66  Aligned_cols=158  Identities=20%  Similarity=0.185  Sum_probs=133.9

Q ss_pred             cccccccccceeccCCCCC--------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT--------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+.+....        ....+..+.+|++|.+++.++++.+.+ ++++|++||++|......+.+.+.+
T Consensus        25 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~  104 (239)
T PRK12828         25 AWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDAD  104 (239)
T ss_pred             HHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHH
Confidence            4567778888777653321        123467788999999999999999998 9999999999998776667777899


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +++..+++|+.+++.+++++.+.+.+++.++||++||..+..+.+....|+++|++++.+++.++.++....+.+.+..|
T Consensus       105 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~p  184 (239)
T PRK12828        105 TWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLP  184 (239)
T ss_pred             HHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            99999999999999999999999988778999999999988888888999999999999999999998766667777788


Q ss_pred             Ccccccc
Q psy5462         155 LRSVTIL  161 (182)
Q Consensus       155 ~~~~~~~  161 (182)
                      ++..++.
T Consensus       185 g~v~~~~  191 (239)
T PRK12828        185 SIIDTPP  191 (239)
T ss_pred             CcccCcc
Confidence            8776654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-19  Score=134.47  Aligned_cols=156  Identities=24%  Similarity=0.195  Sum_probs=128.4

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +.|.++|+.+..+.+.....     ...+.++.+|+++.+++.++++..   +++|++|||+|........+.+.++|+.
T Consensus        27 ~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---~~~d~vi~~ag~~~~~~~~~~~~~~~~~  103 (245)
T PRK07060         27 VALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAA---GAFDGLVNCAGIASLESALDMTAEGFDR  103 (245)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHh---CCCCEEEECCCCCCCCChhhCCHHHHHH
Confidence            35667788877776533111     113567899999999988887763   7899999999987777777788999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .+++|+.+++.+++++.+.+++++ .++||++||..+..+.+....|+++|++++.++++++.++......+.+..|++.
T Consensus       104 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v  183 (245)
T PRK07060        104 VMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVT  183 (245)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCC
Confidence            999999999999999999988654 4899999999988888889999999999999999999998766667777788877


Q ss_pred             ccccc
Q psy5462         158 VTILY  162 (182)
Q Consensus       158 ~~~~~  162 (182)
                      .++..
T Consensus       184 ~~~~~  188 (245)
T PRK07060        184 LTPMA  188 (245)
T ss_pred             CCchh
Confidence            76653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.1e-19  Score=134.53  Aligned_cols=159  Identities=21%  Similarity=0.203  Sum_probs=132.4

Q ss_pred             cccccccccceeccCCCCC--------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-CCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT--------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-ASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+.+....        ...++.++.+|++|++++..+++.+.+ ++++|++||++|.. ....+...+.
T Consensus        29 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~  108 (264)
T PRK12829         29 EAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITP  108 (264)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCH
Confidence            4567789988777643211        112568899999999999999999988 89999999999987 4456677889


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      ++|+..+++|+.+++.+++++.+.+...+. ++|+++||..+..+.+....|+.+|++++.+++.++.++......+.+.
T Consensus       109 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l  188 (264)
T PRK12829        109 EQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAI  188 (264)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            999999999999999999999998887665 7899999888877888888999999999999999999987656677777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..++..
T Consensus       189 ~pg~v~~~~~  198 (264)
T PRK12829        189 LPGIVRGPRM  198 (264)
T ss_pred             ecCCcCChHH
Confidence            8887766544

>PRK09135 pteridine reductase; Provisional

Probab=99.83  E-value=3.7e-19  Score=131.98  Aligned_cols=157  Identities=17%  Similarity=0.117  Sum_probs=130.5

Q ss_pred             cccccccccceeccCCCC-----------C-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------T-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+++...           . .+..+.++.+|++|.+++.++++.+.+ ++++|++|||||...+.++.+
T Consensus        24 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~  103 (249)
T PRK09135         24 RTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGS  103 (249)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhh
Confidence            456778888887764321           1 134588899999999999999999988 899999999999877777777


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++++..+++|+.+++.+.+++.+.+.++ .+.++++++..+..+.++...|+.+|++++.+++.++.++.+ ...+.
T Consensus       104 ~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~  181 (249)
T PRK09135        104 ITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVN  181 (249)
T ss_pred             CCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEE
Confidence            7889999999999999999999999988764 478888888777777788899999999999999999999865 35677


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      +..|++..++..
T Consensus       182 ~v~pg~~~~~~~  193 (249)
T PRK09135        182 AVAPGAILWPED  193 (249)
T ss_pred             EEEeccccCccc
Confidence            778877666553

>PRK08017 oxidoreductase; Provisional

Probab=99.82  E-value=2.8e-19  Score=133.31  Aligned_cols=159  Identities=18%  Similarity=0.148  Sum_probs=132.5

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+..+.+.....    ...+..+.||++|.+++..+++.+.+ . +++|.+|||+|...+.++.+.+.++++
T Consensus        20 ~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~   99 (256)
T PRK08017         20 LELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQME   99 (256)
T ss_pred             HHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHH
Confidence            45667788877665433211    12467899999999999999999877 4 689999999998766777788999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.+++++++.+++.+++.+.++||++||..+..+.+....|+++|++++.++++++.++......+.+..|++.
T Consensus       100 ~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~  179 (256)
T PRK08017        100 QQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPI  179 (256)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCc
Confidence            99999999999999999999988878899999999888888889999999999999999999998876667777788776


Q ss_pred             ccccc
Q psy5462         158 VTILY  162 (182)
Q Consensus       158 ~~~~~  162 (182)
                      .+...
T Consensus       180 ~t~~~  184 (256)
T PRK08017        180 RTRFT  184 (256)
T ss_pred             ccchh
Confidence            55543

>KOG1208|consensus

Probab=99.82  E-value=1.9e-19  Score=137.08  Aligned_cols=156  Identities=20%  Similarity=0.143  Sum_probs=127.4

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      +.|+.+|+.|....+...            ....++.+++||+++.+++.++.+.+.+ ++++|++|||||+.....  .
T Consensus        53 ~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~  130 (314)
T KOG1208|consen   53 RELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--S  130 (314)
T ss_pred             HHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--c
Confidence            567788888877765441            2346788899999999999999999999 999999999999987644  5


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--------c-----cCCCchhhhhHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--------A-----AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--------~-----~~~~~~y~~sKaa~~~~~~~  137 (182)
                      .+.|.++..+++|++|++.+++.++|.|+...++|||++||..+..        +     .....+|+.||.+...+++.
T Consensus       131 ~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~e  210 (314)
T KOG1208|consen  131 LTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANE  210 (314)
T ss_pred             cCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHH
Confidence            5678899999999999999999999999988779999999977510        0     12234699999999999999


Q ss_pred             HHhhhCCCccceeeeCCCccccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |++.+.. ++.+....|+...+...
T Consensus       211 L~k~l~~-~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  211 LAKRLKK-GVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             HHHHhhc-CceEEEECCCcccccce
Confidence            9999886 55666668887777733

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.1e-19  Score=130.91  Aligned_cols=158  Identities=20%  Similarity=0.147  Sum_probs=127.1

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCC--CCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVAS--SSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~~~~   76 (182)
                      ++|.++|+.+..+++.....     ..++.++.||++|+++++++++.+.+ +++|++|||||...+  .++.+.+.+++
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~~~   97 (225)
T PRK08177         19 DRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQG-QRFDLLFVNAGISGPAHQSAADATAAEI   97 (225)
T ss_pred             HHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhc-CCCCEEEEcCcccCCCCCCcccCCHHHH
Confidence            46777888888777544321     13577889999999999999888754 479999999998643  35677889999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ...+++|+.+++.+++++.+++++. .+.++++||..+..+   ......|+++|++++.++++++.|++...+.+...+
T Consensus        98 ~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~  176 (225)
T PRK08177         98 GQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMH  176 (225)
T ss_pred             hhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEc
Confidence            9999999999999999999988653 478999998766443   335678999999999999999999987666777779


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|+...
T Consensus       177 PG~i~t~~~~  186 (225)
T PRK08177        177 PGWVKTDMGG  186 (225)
T ss_pred             CCceecCCCC
Confidence            9988877643

>KOG1014|consensus

Probab=99.82  E-value=2.4e-20  Score=138.39  Aligned_cols=160  Identities=24%  Similarity=0.208  Sum_probs=134.2

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHH-HHHHHHHHHhcCCccEEEEcccCCC--CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVA--SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~id~li~~ag~~~--~~~~~   69 (182)
                      +.|++||..+..+.+...           ..+.++..+.+|+++++. .+++.+.+.. .++.+||||+|...  |..+.
T Consensus        67 ~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~VgILVNNvG~~~~~P~~f~  145 (312)
T KOG1014|consen   67 RELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDVGILVNNVGMSYDYPESFL  145 (312)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-CceEEEEecccccCCCcHHHH
Confidence            467889999888875442           234689999999999887 3333333321 35889999999987  56688


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.+.++..+++|..+...+++.++|.|.++++|-|+++||.++..|.|.++.|+++|+.++.|+++|..|+...++.+
T Consensus       146 ~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~V  225 (312)
T KOG1014|consen  146 KYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFV  225 (312)
T ss_pred             hCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence            88888999999999999999999999999999999999999999999999999999999999999999999999777777


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      ....|..+.+.+.+.
T Consensus       226 q~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  226 QSVIPYLVATKMAKY  240 (312)
T ss_pred             EEeehhheecccccc
Confidence            777888777766654

>KOG1204|consensus

Probab=99.80  E-value=4.4e-19  Score=126.05  Aligned_cols=139  Identities=24%  Similarity=0.231  Sum_probs=118.3

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC-C--cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHh
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS-S--VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE  100 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~-~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  100 (182)
                      +.......|++....+..+++..++ .++.|++|||||..++- .  ....+.++|.+.|+.|+++.+.+.+.++|.+++
T Consensus        54 d~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~  133 (253)
T KOG1204|consen   54 DDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKK  133 (253)
T ss_pred             CCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcC
Confidence            4455567788888888999999988 89999999999998762 2  336788999999999999999999999999988


Q ss_pred             CC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         101 NN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       101 ~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++ .+.+||+||.+...|.+.++.||++|+|.+++.+.||.|-. ..+.+-...|+...|.+..-
T Consensus       134 ~p~~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~  197 (253)
T KOG1204|consen  134 SPVNGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVC  197 (253)
T ss_pred             CCccCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHH
Confidence            75 69999999999999999999999999999999999999944 33344445888888887754

>KOG1199|consensus

Probab=99.77  E-value=3.5e-20  Score=126.67  Aligned_cols=160  Identities=22%  Similarity=0.206  Sum_probs=130.9

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC------Ccc
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS------SVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~------~~~   69 (182)
                      .+|.+.|+.+..++.-.       .+.|+++.+...|+++++++...+..+.. ||++|.+|||||+.-..      .-.
T Consensus        27 erlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~  106 (260)
T KOG1199|consen   27 ERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKK  106 (260)
T ss_pred             HHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccc
Confidence            56788888888876322       23578999999999999999999999999 99999999999986431      123


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ..+.+++++.+++|+.|+|++++...-.|-++      .+|.||+..|.+++.+..+..+|++||.++.+|+--++++++
T Consensus       107 ~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla  186 (260)
T KOG1199|consen  107 HHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLA  186 (260)
T ss_pred             cccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcc
Confidence            45789999999999999999999988877653      258999999999999999999999999999999999999999


Q ss_pred             CCccceeeeCCCcccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~  163 (182)
                      ...+.+....|+.-.|+...
T Consensus       187 ~~gir~~tiapglf~tplls  206 (260)
T KOG1199|consen  187 GDGIRFNTIAPGLFDTPLLS  206 (260)
T ss_pred             cCceEEEeecccccCChhhh
Confidence            65444444456655555443

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.3e-17  Score=121.15  Aligned_cols=148  Identities=14%  Similarity=0.074  Sum_probs=104.2

Q ss_pred             cccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.+..+++....     .......+.+|++|.+++.+.      ++++|++|||||....   .+.+.++|+.
T Consensus        32 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~------~~~iDilVnnAG~~~~---~~~~~~~~~~  102 (245)
T PRK12367         32 KAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQ------LASLDVLILNHGINPG---GRQDPENINK  102 (245)
T ss_pred             HHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHh------cCCCCEEEECCccCCc---CCCCHHHHHH
Confidence            4567788887776543210     111236789999999876532      5789999999997533   3468899999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhC---CCCeEEEEeccccccccCCCchhhhhHHHHHHHH---HHHHhhhCCCccceeee
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLEN---NTGHIVCISSIAALTAAVNVSAYFASKYGVTENH---PSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~---~~la~e~~~~~~~i~v~  152 (182)
                      .+++|+.++++++++++|.|+++   +++.+++.+|.++..+ +....|++||+++..+.   +.++.|+....+.+++.
T Consensus       103 ~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~  181 (245)
T PRK12367        103 ALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKL  181 (245)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEe
Confidence            99999999999999999999763   2334545556555444 45678999999986544   34444545556677777


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      .|++..|+.
T Consensus       182 ~pg~~~t~~  190 (245)
T PRK12367        182 ILGPFRSEL  190 (245)
T ss_pred             cCCCccccc
Confidence            888776654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=2.5e-17  Score=121.56  Aligned_cols=154  Identities=16%  Similarity=0.074  Sum_probs=123.9

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      +.|.++|+.|..+.+...         ....+++++.||+++++++.++++.+.. ++++|.+|+++|.....++.  +.
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~--~~  100 (238)
T PRK05786         23 YFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVE--EF  100 (238)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchH--HH
Confidence            456677887777664321         0113678899999999999999999988 89999999999875544333  34


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      ++++.++++|+.+++.+.+.+.|.+.+  .+++|++||..+.. +.+....|+++|++++.++++++.++....+++.+.
T Consensus       101 ~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i  178 (238)
T PRK05786        101 SGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGI  178 (238)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            889999999999999999999998864  47899999987643 556778899999999999999999988666778888


Q ss_pred             CCCcccccc
Q psy5462         153 TPLRSVTIL  161 (182)
Q Consensus       153 ~~~~~~~~~  161 (182)
                      .|++..++.
T Consensus       179 ~pg~v~~~~  187 (238)
T PRK05786        179 APTTISGDF  187 (238)
T ss_pred             ecCccCCCC
Confidence            888877654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-17  Score=119.82  Aligned_cols=156  Identities=15%  Similarity=0.106  Sum_probs=120.0

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCC--CCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVA--SSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~--~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.+..+++.....    ...+.++.+|+++.++++++++.+.. +++|++|||+|...  ...+.+.+.++|+
T Consensus        19 ~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~   97 (222)
T PRK06953         19 RQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDG-EALDAAVYVAGVYGPRTEGVEPITREDFD   97 (222)
T ss_pred             HHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcC-CCCCEEEECCCcccCCCCCcccCCHHHHH
Confidence            35667788877765432210    12356899999999999998776642 46999999999863  2445667899999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC---chhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV---SAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~---~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      ..+++|+.+++.+++++.|+|.+ ..++++++||..+..+....   ..|+++|++++.+++.++.++.  ...+....|
T Consensus        98 ~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~P  174 (222)
T PRK06953         98 AVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIALHP  174 (222)
T ss_pred             HHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECC
Confidence            99999999999999999998865 35899999998766553322   3699999999999999999864  456777788


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..++...
T Consensus       175 g~i~t~~~~  183 (222)
T PRK06953        175 GWVRTDMGG  183 (222)
T ss_pred             CeeecCCCC
Confidence            888877644

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.1e-17  Score=124.18  Aligned_cols=148  Identities=18%  Similarity=0.084  Sum_probs=112.5

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+....+...           ..+.++.++.+|++|++++.++++.+.+ ++++|++|||||......    
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~----   99 (248)
T PRK07806         24 KILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESG----   99 (248)
T ss_pred             HHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCC----
Confidence            456677888776654321           1134678899999999999999999988 899999999998643211    


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-----cccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-----TAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-----~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                        .++...+++|+.+++++++++.++|.+  .++||++||..+.     .+.+.+..|+.+|++++.++++++.|++...
T Consensus       100 --~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~  175 (248)
T PRK07806        100 --MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKG  175 (248)
T ss_pred             --CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccC
Confidence              124567889999999999999998854  4799999986543     2234467899999999999999999998665


Q ss_pred             cceeeeCCCcccc
Q psy5462         147 WGTTVTTPLRSVT  159 (182)
Q Consensus       147 ~~i~v~~~~~~~~  159 (182)
                      +.+.+..|+...+
T Consensus       176 i~v~~v~pg~~~~  188 (248)
T PRK07806        176 IGFVVVSGDMIEG  188 (248)
T ss_pred             eEEEEeCCccccC
Confidence            5555556655444

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5e-17  Score=119.03  Aligned_cols=150  Identities=25%  Similarity=0.293  Sum_probs=119.8

Q ss_pred             ccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           5 RTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +|.++ +.+..+.+....      ....+.++.+|++|++++.++++.+   +++|++||++|.....++.+.+.++|..
T Consensus        22 ~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi~~ag~~~~~~~~~~~~~~~~~   97 (227)
T PRK08219         22 ELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL---GRLDVLVHNAGVADLGPVAESTVDEWRA   97 (227)
T ss_pred             HHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc---CCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence            34555 666666543211      1225788999999999998887765   5799999999987766677788999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++++|+.+++.+.+.+++.++++ .+++|++||..+..+.++...|+.+|++++.+++.++.++... ..+....|++..
T Consensus        98 ~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~  175 (227)
T PRK08219         98 TLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTD  175 (227)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCcc
Confidence            99999999999999999988875 4799999999988888888999999999999999999987743 455555666544


Q ss_pred             cc
Q psy5462         159 TI  160 (182)
Q Consensus       159 ~~  160 (182)
                      ++
T Consensus       176 ~~  177 (227)
T PRK08219        176 TD  177 (227)
T ss_pred             ch
Confidence            43

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.73  E-value=7.9e-17  Score=114.79  Aligned_cols=135  Identities=16%  Similarity=0.182  Sum_probs=116.6

Q ss_pred             eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHh
Q psy5462          26 VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA----SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE  100 (182)
Q Consensus        26 ~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  100 (182)
                      ...+++||+++.++++++|+.+.+ +|++|++||+.+..+    .+.+.+.+-+.|...+++..++...+.+++.|.|..
T Consensus        57 s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~  136 (259)
T COG0623          57 SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN  136 (259)
T ss_pred             CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC
Confidence            366899999999999999999999 999999999999887    267788999999999999999999999999998865


Q ss_pred             CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee--CCCccccccccc
Q psy5462         101 NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT--TPLRSVTILYQR  164 (182)
Q Consensus       101 ~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~--~~~~~~~~~~~~  164 (182)
                        +|.||.++=..+....|++...+.+||++++-+|-||.++++.  +||||  +-+|..|.-...
T Consensus       137 --ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~--gIRVNaISAGPIrTLAasg  198 (259)
T COG0623         137 --GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKE--GIRVNAISAGPIRTLAASG  198 (259)
T ss_pred             --CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhCcc--CeEEeeecccchHHHHhhc
Confidence              6899988766666677889999999999999999999999976  66666  555666554444

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.70  E-value=6.3e-16  Score=108.52  Aligned_cols=126  Identities=13%  Similarity=0.058  Sum_probs=107.6

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN  102 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  102 (182)
                      +.++.++.+|++++++++++++.+.. ++++|.+||++|......+.+.+.++++..+++|+.+++.+.+++.+    .+
T Consensus        52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~  127 (180)
T smart00822       52 GAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----LP  127 (180)
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----CC
Confidence            45788899999999999999999888 99999999999987666777889999999999999999999998843    34


Q ss_pred             CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         103 TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       103 ~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .+++|++||..+..+.++...|+++|+++..+++.++.+    ..++...+|++.
T Consensus       128 ~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~~~~----~~~~~~~~~g~~  178 (180)
T smart00822      128 LDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHRRAR----GLPATSINWGAW  178 (180)
T ss_pred             cceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHHHhc----CCceEEEeeccc
Confidence            589999999998888889999999999999999887665    234555566543

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.69  E-value=6e-16  Score=142.29  Aligned_cols=135  Identities=14%  Similarity=0.093  Sum_probs=116.0

Q ss_pred             CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC
Q psy5462          22 TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN  101 (182)
Q Consensus        22 ~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  101 (182)
                      ..|.++.++.||++|.+++.++++.+.+.++||+||||||......+.+.+.++|+.++++|+.|++++++++.+.+   
T Consensus      2091 ~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~--- 2167 (2582)
T TIGR02813      2091 AAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAEN--- 2167 (2582)
T ss_pred             hcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhC---
Confidence            45678999999999999999999998774579999999999888889999999999999999999999999987643   


Q ss_pred             CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         102 NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       102 ~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                       .++||++||..++.+.++++.|+++|++++.+++.++.++..  ..+...+|++..+.+.
T Consensus      2168 -~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2168 -IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             -CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCcc
Confidence             357999999999999999999999999999999999999752  3555556665555443

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.63  E-value=5.3e-15  Score=105.12  Aligned_cols=116  Identities=18%  Similarity=0.246  Sum_probs=92.6

Q ss_pred             CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHh
Q psy5462          22 TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE  100 (182)
Q Consensus        22 ~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  100 (182)
                      ..+.++.+++||++|++++.++++.+.+ +++|+.|||+||......+.+.+.++++..+...+.+..++.+++.+    
T Consensus        50 ~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----  125 (181)
T PF08659_consen   50 SAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----  125 (181)
T ss_dssp             HTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             hCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----
Confidence            3478999999999999999999999999 99999999999998888899999999999999999999999998854    


Q ss_pred             CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462         101 NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus       101 ~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      .....+|++||.++..|.++...|+++.+.++.|++..+..
T Consensus       126 ~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~~  166 (181)
T PF08659_consen  126 RPLDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRSR  166 (181)
T ss_dssp             TTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999987665

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.63  E-value=7.9e-15  Score=115.63  Aligned_cols=145  Identities=17%  Similarity=0.110  Sum_probs=103.6

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.+..+++..+       ....++..+.+|++|++++.+.      ++++|++|||||....   .+.+.+++
T Consensus       196 ~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~------l~~IDiLInnAGi~~~---~~~s~e~~  266 (406)
T PRK07424        196 KELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAEL------LEKVDILIINHGINVH---GERTPEAI  266 (406)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHH------hCCCCEEEECCCcCCC---CCCCHHHH
Confidence            345667887776653221       1123467889999999877543      3579999999997543   35688999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCC----CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNT----GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      +.++++|+.+++.++++++|.|++++.    +.+|++|+ ++. +.+..+.|++||+|+..++. ++++.  .+..+++.
T Consensus       267 ~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i  341 (406)
T PRK07424        267 NKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKL  341 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEE
Confidence            999999999999999999999987642    34566554 433 33445789999999999985 44442  24567777


Q ss_pred             CCCccccccc
Q psy5462         153 TPLRSVTILY  162 (182)
Q Consensus       153 ~~~~~~~~~~  162 (182)
                      .|++..+...
T Consensus       342 ~~gp~~t~~~  351 (406)
T PRK07424        342 ILGPFKSNLN  351 (406)
T ss_pred             EeCCCcCCCC
Confidence            7777666554

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.43  E-value=2.9e-12  Score=99.04  Aligned_cols=119  Identities=17%  Similarity=0.151  Sum_probs=91.9

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTG  104 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  104 (182)
                      .++.++.+|++|++++.++++      ++|++||+||.... +..+.++   ...+++|+.++.++++++.+    .+.+
T Consensus        53 ~~~~~v~~Dl~d~~~l~~~~~------~iD~Vih~Ag~~~~-~~~~~~~---~~~~~~Nv~g~~~ll~aa~~----~~~~  118 (324)
T TIGR03589        53 PCLRFFIGDVRDKERLTRALR------GVDYVVHAAALKQV-PAAEYNP---FECIRTNINGAQNVIDAAID----NGVK  118 (324)
T ss_pred             CcEEEEEccCCCHHHHHHHHh------cCCEEEECcccCCC-chhhcCH---HHHHHHHHHHHHHHHHHHHH----cCCC
Confidence            468899999999999887765      38999999997532 2222233   46899999999999999875    3457


Q ss_pred             eEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         105 HIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       105 ~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +||++||.....|   ...|+++|++.+.++++++.+......++.+..|++...+
T Consensus       119 ~iV~~SS~~~~~p---~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       119 RVVALSTDKAANP---INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             EEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            9999999765433   4789999999999999998876655667777788866553

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.40  E-value=8.9e-12  Score=97.19  Aligned_cols=146  Identities=11%  Similarity=-0.026  Sum_probs=105.0

Q ss_pred             cccccccccceeccCCCCCC---------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++.....         +.++.++.+|++|.+++.++++..    ++|++||+|+....    ..+.+
T Consensus        22 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~vih~A~~~~~----~~~~~   93 (349)
T TIGR02622        22 LWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF----KPEIVFHLAAQPLV----RKSYA   93 (349)
T ss_pred             HHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc----CCCEEEECCccccc----ccchh
Confidence            46777888887776433211         235678999999999999988874    58999999986432    23456


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc------------ccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT------------AAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      ++...+++|+.+++++++++.+.   ...+++|++||...+.            +..+...|+.+|.+.+.+++.++.++
T Consensus        94 ~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  170 (349)
T TIGR02622        94 DPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSF  170 (349)
T ss_pred             CHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHh
Confidence            67788999999999999987431   1246899999965431            12345789999999999999999876


Q ss_pred             CC----CccceeeeCCCccccc
Q psy5462         143 GY----MLWGTTVTTPLRSVTI  160 (182)
Q Consensus       143 ~~----~~~~i~v~~~~~~~~~  160 (182)
                      ..    ...++.+..|+....+
T Consensus       171 ~~~~~~~~i~~~~lR~~~vyGp  192 (349)
T TIGR02622       171 FGVANFHGIKIASARAGNVIGG  192 (349)
T ss_pred             hcccccCCCcEEEEccCcccCC
Confidence            43    2446666666655543

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1478|consensus

Probab=99.37  E-value=2.5e-12  Score=93.36  Aligned_cols=141  Identities=18%  Similarity=0.216  Sum_probs=116.2

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc---------------------------cCCHH
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL---------------------------AHTDH   74 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~---------------------------~~~~~   74 (182)
                      ...++.++.+|+|+..++.++...+.+ |.++|.+..|||......+.                           ..+.|
T Consensus        59 ~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D  138 (341)
T KOG1478|consen   59 STIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISAD  138 (341)
T ss_pred             ceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceeccc
Confidence            356899999999999999999999999 99999999999986532221                           35668


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---------cCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---------AVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---------~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      ++..+++.|+.|++.+.+.+.|.+-.++...+|.+||..+...         ..+.-+|+.||.+.+-+.-++-+.+.+.
T Consensus       139 ~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~  218 (341)
T KOG1478|consen  139 GLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPL  218 (341)
T ss_pred             chhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhcccccc
Confidence            8999999999999999999999988777679999999876432         2345789999999999999999998876


Q ss_pred             ccceeeeCCCcccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~  163 (182)
                      +..-.+..|+...+....
T Consensus       219 g~~qyvv~pg~~tt~~~~  236 (341)
T KOG1478|consen  219 GINQYVVQPGIFTTNSFS  236 (341)
T ss_pred             chhhhcccCceeecchhh
Confidence            667777888865555443

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.33  E-value=6.1e-11  Score=92.60  Aligned_cols=111  Identities=15%  Similarity=0.094  Sum_probs=85.4

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHH---h-
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDML---E-  100 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~-  100 (182)
                      .++.++.+|++|.++++++++..    ++|+|||+||....    ..+.++++..+++|+.++.++++++.+.+.   . 
T Consensus        51 ~~~~~~~~Dl~d~~~~~~~~~~~----~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~  122 (355)
T PRK10217         51 ERFAFEKVDICDRAELARVFTEH----QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED  122 (355)
T ss_pred             CceEEEECCCcChHHHHHHHhhc----CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhccccc
Confidence            35778899999999999888763    58999999987532    224456788999999999999999987532   1 


Q ss_pred             -CCCCeEEEEecccccc-------------ccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         101 -NNTGHIVCISSIAALT-------------AAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       101 -~~~~~ii~iss~~~~~-------------~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                       .+..++|++||...+.             +..+.+.|+.+|.+.+.+++.++.+.+
T Consensus       123 ~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~  179 (355)
T PRK10217        123 KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG  179 (355)
T ss_pred             ccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence             1235899999865321             123467899999999999999988865

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.32  E-value=3e-11  Score=93.24  Aligned_cols=142  Identities=15%  Similarity=0.022  Sum_probs=100.3

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.....            ....++.++.+|++|.+++.++++      ++|++||+||....    ..
T Consensus        23 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vih~A~~~~~----~~   92 (325)
T PLN02989         23 KLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------GCETVFHTASPVAI----TV   92 (325)
T ss_pred             HHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc------CCCEEEEeCCCCCC----CC
Confidence            456778888765532221            112468899999999998887765      47999999996432    22


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC----------------------CCchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV----------------------NVSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~----------------------~~~~y~~sKa  129 (182)
                      +.+.+...+++|+.+++++++++.+.+   +.++||++||.+++.+..                      ....|+.+|.
T Consensus        93 ~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~  169 (325)
T PLN02989         93 KTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKT  169 (325)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHH
Confidence            345678899999999999999987643   246999999976543211                      0246999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +.+.+++.++.+..   .++.+..|.....+.
T Consensus       170 ~~E~~~~~~~~~~~---~~~~ilR~~~vyGp~  198 (325)
T PLN02989        170 LAEDAAWRFAKDNE---IDLIVLNPGLVTGPI  198 (325)
T ss_pred             HHHHHHHHHHHHcC---CeEEEEcCCceeCCC
Confidence            99999999887743   355666666544433

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.31  E-value=4.2e-11  Score=93.08  Aligned_cols=132  Identities=11%  Similarity=-0.013  Sum_probs=95.6

Q ss_pred             cccccccccceeccCCCC---------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..++..-.               ..+.++.++.+|++|.+++..+++..    ++|+|||+|+...... 
T Consensus        24 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~A~~~~~~~-   98 (340)
T PLN02653         24 EFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI----KPDEVYNLAAQSHVAV-   98 (340)
T ss_pred             HHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc----CCCEEEECCcccchhh-
Confidence            456777888877643211               01345789999999999999988875    4899999999754321 


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccc----------cCCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTA----------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~----------~~~~~~y~~sKaa~~~~~~~  137 (182)
                         ..+.....+++|+.++.++++++.+...+++. .++|++||...+-.          ..+...|+.+|.+.+.+++.
T Consensus        99 ---~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  175 (340)
T PLN02653         99 ---SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVN  175 (340)
T ss_pred             ---hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence               23445677899999999999999876543211 27888887643321          12357899999999999999


Q ss_pred             HHhhhC
Q psy5462         138 IKCFSG  143 (182)
Q Consensus       138 la~e~~  143 (182)
                      ++.+++
T Consensus       176 ~~~~~~  181 (340)
T PLN02653        176 YREAYG  181 (340)
T ss_pred             HHHHcC
Confidence            998865

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.31  E-value=5.4e-11  Score=88.40  Aligned_cols=135  Identities=13%  Similarity=0.036  Sum_probs=106.0

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      .++..++++|+.|.+.+.+++++-    ++|+++|-|+-.....    +.+.-...+++|+.|++.|+.++..+..+   
T Consensus        50 ~~~~~fv~~DI~D~~~v~~~~~~~----~~D~VvhfAAESHVDR----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~---  118 (340)
T COG1088          50 SPRYRFVQGDICDRELVDRLFKEY----QPDAVVHFAAESHVDR----SIDGPAPFIQTNVVGTYTLLEAARKYWGK---  118 (340)
T ss_pred             CCCceEEeccccCHHHHHHHHHhc----CCCeEEEechhccccc----cccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence            468999999999999999999873    6999999988654322    45555667899999999999999876432   


Q ss_pred             CeEEEEeccccc-------------cccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccccccchhhHH
Q psy5462         104 GHIVCISSIAAL-------------TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQ  170 (182)
Q Consensus       104 ~~ii~iss~~~~-------------~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~~~~~~~  170 (182)
                      -+++.||+--.+             .|..+.++|++|||+-+.|++++.+.++   .++.+.++.+...+.+-.+...|.
T Consensus       119 frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYg---lp~~ItrcSNNYGPyqfpEKlIP~  195 (340)
T COG1088         119 FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYG---LPATITRCSNNYGPYQFPEKLIPL  195 (340)
T ss_pred             ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC---CceEEecCCCCcCCCcCchhhhHH
Confidence            478999873321             2344668999999999999999999976   388888888877777777777775


Q ss_pred             HH
Q psy5462         171 LL  172 (182)
Q Consensus       171 ~~  172 (182)
                      ..
T Consensus       196 ~I  197 (340)
T COG1088         196 MI  197 (340)
T ss_pred             HH
Confidence            43

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.29  E-value=1e-10  Score=93.93  Aligned_cols=142  Identities=9%  Similarity=-0.025  Sum_probs=101.0

Q ss_pred             cccccccccceeccCCCCC---------------------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEE
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDIL   56 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~l   56 (182)
                      ++|.++|+.|..++.....                           .+.++.++.+|++|.+.+.++++..    ++|+|
T Consensus        65 ~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~~~----~~D~V  140 (442)
T PLN02572         65 LHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSF----EPDAV  140 (442)
T ss_pred             HHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHHhC----CCCEE
Confidence            5677889888887532210                           0235789999999999999988874    58999


Q ss_pred             EEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccc------------------
Q psy5462          57 INNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTA------------------  117 (182)
Q Consensus        57 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~------------------  117 (182)
                      ||+|+... ......+++++...+++|+.+++++++++...    +. .++|++||...+-.                  
T Consensus       141 iHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e  215 (442)
T PLN02572        141 VHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRT  215 (442)
T ss_pred             EECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEEEecceecCCCCCCCccccccccccccc
Confidence            99987643 23334456667788899999999999988653    22 48999998764411                  


Q ss_pred             ------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         118 ------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       118 ------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                            ..+...|+.+|.+.+.+++.++..++-   ++.+..|...
T Consensus       216 ~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl---~~v~lR~~~v  258 (442)
T PLN02572        216 DTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI---RATDLNQGVV  258 (442)
T ss_pred             ccccCCCCCCCcchhHHHHHHHHHHHHHHhcCC---CEEEEecccc
Confidence                  112358999999999999988877543   4444444443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.28  E-value=9.5e-11  Score=91.20  Aligned_cols=131  Identities=11%  Similarity=-0.007  Sum_probs=94.3

Q ss_pred             cccccccccceeccCCCCC----------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|..+++....                .+.++.++.+|++|.+++.++++.+    ++|++||+|+......
T Consensus        18 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d~ViH~Aa~~~~~~   93 (343)
T TIGR01472        18 EFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI----KPTEIYNLAAQSHVKV   93 (343)
T ss_pred             HHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC----CCCEEEECCcccccch
Confidence            4677788888877643210                0235789999999999999988874    4899999999754322


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~  136 (182)
                          +.+.-...+++|+.++.++++++.+.-.+ +..++|++||...+-           +..+...|+.||.+.+.+++
T Consensus        94 ----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~  168 (343)
T TIGR01472        94 ----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITV  168 (343)
T ss_pred             ----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence                22223466789999999999998763111 124799999965432           12245789999999999999


Q ss_pred             HHHhhhC
Q psy5462         137 SIKCFSG  143 (182)
Q Consensus       137 ~la~e~~  143 (182)
                      .++.+++
T Consensus       169 ~~~~~~~  175 (343)
T TIGR01472       169 NYREAYG  175 (343)
T ss_pred             HHHHHhC
Confidence            9988764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.26  E-value=3.7e-10  Score=87.82  Aligned_cols=141  Identities=13%  Similarity=-0.019  Sum_probs=98.0

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC-----------------c-----------------
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS-----------------V-----------------   68 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~-----------------~-----------------   68 (182)
                      +..+..+.||+++++++.++++.+.+ +|++|+||||+|......                 +                 
T Consensus       102 G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~  181 (398)
T PRK13656        102 GLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTV  181 (398)
T ss_pred             CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEE
Confidence            45678899999999999999999999 999999999998873311                 1                 


Q ss_pred             ccCCHHHHHHHHHHHhHH-HHHHH--HHHhHHHHhCCCCeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhC
Q psy5462          69 LAHTDHEIERIMDVNLMS-NIKMV--REFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~-~~~l~--~~~~~~l~~~~~~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ...+.++++..+.+.--- -...+  ....+.|.  .++++|-.|........|.+  +.-|.+|++++.-++.|+.+|+
T Consensus       182 ~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        182 EPATEEEIADTVKVMGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             eeCCHHHHHHHHHhhccchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhh
Confidence            123445555554443321 12222  33333332  35899999887766655655  5789999999999999999999


Q ss_pred             CCccceeeeCCCcccccccccch
Q psy5462         144 YMLWGTTVTTPLRSVTILYQRSV  166 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~~~  166 (182)
                      +.+..+++...++..|.-....+
T Consensus       260 ~~giran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        260 AKGGDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             hcCCEEEEEecCcccchhhhcCC
Confidence            76555555566666665555433

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.23  E-value=1.9e-10  Score=85.82  Aligned_cols=140  Identities=11%  Similarity=0.117  Sum_probs=107.7

Q ss_pred             cccccccccceeccCCCCCCC---ce--eEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT---HV--AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~---~~--~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ..|.+.|+++.+++.......   .+  +.++.+|+.|.+.++++|++    .+||.+||.||....+.    +.++.-.
T Consensus        18 ~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~----~~idaViHFAa~~~VgE----Sv~~Pl~   89 (329)
T COG1087          18 RQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEE----NKIDAVVHFAASISVGE----SVQNPLK   89 (329)
T ss_pred             HHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHh----cCCCEEEECccccccch----hhhCHHH
Confidence            568889999999997765432   22  68999999999999999998    47999999999876654    6677778


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .++.|+.|++.|++++..    .+-.+|||-||.+.+-           +..+..+||.||.+.+.+.+.+++..+-...
T Consensus        90 Yy~NNv~gTl~Ll~am~~----~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v  165 (329)
T COG1087          90 YYDNNVVGTLNLIEAMLQ----TGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANPFKVV  165 (329)
T ss_pred             HHhhchHhHHHHHHHHHH----hCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCCCcEE
Confidence            899999999999999754    3456788877766431           1224579999999999999999988664333


Q ss_pred             ceeeeCCC
Q psy5462         148 GTTVTTPL  155 (182)
Q Consensus       148 ~i~v~~~~  155 (182)
                      -.|..+|-
T Consensus       166 ~LRYFN~a  173 (329)
T COG1087         166 ILRYFNVA  173 (329)
T ss_pred             EEEecccc
Confidence            44444444

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.18  E-value=5e-10  Score=86.99  Aligned_cols=139  Identities=12%  Similarity=0.015  Sum_probs=94.8

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+......           ...++.++.+|++|++++.++++      ++|++||+|+...   ..  .
T Consensus        27 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~A~~~~---~~--~   95 (338)
T PLN00198         27 KLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA------GCDLVFHVATPVN---FA--S   95 (338)
T ss_pred             HHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh------cCCEEEEeCCCCc---cC--C
Confidence            3566778887655432211           01257889999999998877665      4799999998532   11  1


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------------------cCCCchhhhhH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------------------AVNVSAYFASK  128 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------------------~~~~~~y~~sK  128 (182)
                      .+.+...+++|+.++.++++++.+.   .+.++||++||.+.+.+                        .++...|+.+|
T Consensus        96 ~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK  172 (338)
T PLN00198         96 EDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASK  172 (338)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHH
Confidence            2234556899999999999998653   23469999999765431                        12345799999


Q ss_pred             HHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462         129 YGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       129 aa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      .+.+.+++.++.+.+   .++.+..|.....
T Consensus       173 ~~~E~~~~~~~~~~~---~~~~~~R~~~vyG  200 (338)
T PLN00198        173 TLAEKAAWKFAEENN---IDLITVIPTLMAG  200 (338)
T ss_pred             HHHHHHHHHHHHhcC---ceEEEEeCCceEC
Confidence            999999999988743   3555555554433

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.15  E-value=1.3e-09  Score=85.07  Aligned_cols=112  Identities=16%  Similarity=0.085  Sum_probs=84.4

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC---
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN---  101 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---  101 (182)
                      .++.++.+|++|.+++.++++..    ++|++||+|+......    +.+..+..+++|+.++.++++++.+++...   
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~  121 (352)
T PRK10084         50 ERYVFEHADICDRAELDRIFAQH----QPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDED  121 (352)
T ss_pred             CceEEEEecCCCHHHHHHHHHhc----CCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccc
Confidence            45778999999999999988763    5999999998753321    223346689999999999999998765321   


Q ss_pred             --CCCeEEEEeccccccc---------------------cCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         102 --NTGHIVCISSIAALTA---------------------AVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       102 --~~~~ii~iss~~~~~~---------------------~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                        +..++|++||...+..                     ..+...|+.+|.+.+.+++.++.+++.
T Consensus       122 ~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~  187 (352)
T PRK10084        122 KKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGL  187 (352)
T ss_pred             cccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Confidence              2348999998653321                     123479999999999999999888653

>PLN02240 UDP-glucose 4-epimerase

Probab=99.15  E-value=1.4e-09  Score=84.85  Aligned_cols=126  Identities=18%  Similarity=0.134  Sum_probs=92.1

Q ss_pred             cccccccccceeccCCCC--------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP--------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.|..++....              ..+.++.++.+|++|++++..+++..    ++|++||+|+......  
T Consensus        23 ~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~----~~d~vih~a~~~~~~~--   96 (352)
T PLN02240         23 LQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST----RFDAVIHFAGLKAVGE--   96 (352)
T ss_pred             HHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC----CCCEEEEccccCCccc--
Confidence            456677888877753211              12346788999999999999988763    6899999998753221  


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHH
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                        +.+++...+++|+.++.++++++.    +.+.+++|++||...+.           +..+...|+.+|.+.+.+++.+
T Consensus        97 --~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  170 (352)
T PLN02240         97 --SVAKPLLYYDNNLVGTINLLEVMA----KHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDI  170 (352)
T ss_pred             --cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence              334567789999999999998763    33446899999965331           1123578999999999999988


Q ss_pred             Hhh
Q psy5462         139 KCF  141 (182)
Q Consensus       139 a~e  141 (182)
                      +.+
T Consensus       171 ~~~  173 (352)
T PLN02240        171 HAS  173 (352)
T ss_pred             HHh
Confidence            765

>PRK06720 hypothetical protein; Provisional

Probab=99.14  E-value=3.6e-10  Score=79.34  Aligned_cols=107  Identities=8%  Similarity=0.110  Sum_probs=79.2

Q ss_pred             ccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCC
Q psy5462           5 RTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHT   72 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~   72 (182)
                      .|.++|+.+...+....          ..+.++.++.+|+++.+++.++++.+.+ +|++|++|||||.... .++.+.+
T Consensus        35 ~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~  114 (169)
T PRK06720         35 LLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQ  114 (169)
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccc
Confidence            45667777766653321          2245677899999999999999999888 9999999999998764 4455545


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-------CCeEEEEecccc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-------TGHIVCISSIAA  114 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~~~ii~iss~~~  114 (182)
                      .++ +.  .+|+.+.+..++.+.++|.+++       .|++..||+.+.
T Consensus       115 ~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720        115 END-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             hhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            545 33  5677777889999999888753       478888877553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.14  E-value=5.2e-10  Score=91.14  Aligned_cols=139  Identities=9%  Similarity=0.001  Sum_probs=99.5

Q ss_pred             cccccccccceeccCCCCC---------------C----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------K----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVA   64 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~   64 (182)
                      ++|+++|+.|..+.+....               .    ..++.++.+|++|.+++.+.      ++++|+||||+|...
T Consensus        98 r~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a------LggiDiVVn~AG~~~  171 (576)
T PLN03209         98 RELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA------LGNASVVICCIGASE  171 (576)
T ss_pred             HHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH------hcCCCEEEEcccccc
Confidence            4567788888776533211               1    13588999999999887653      357899999998753


Q ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          65 SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .      ...++...+++|+.+..++++++..    .+.++||++||.++. .+.+. ..|. +|+++..+.+.+..++.
T Consensus       172 ~------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~g~p~-~~~~-sk~~~~~~KraaE~~L~  239 (576)
T PLN03209        172 K------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKVGFPA-AILN-LFWGVLCWKRKAEEALI  239 (576)
T ss_pred             c------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcccCccc-cchh-hHHHHHHHHHHHHHHHH
Confidence            2      1224677889999999999999854    345799999998763 23222 2243 78888888888888887


Q ss_pred             CCccceeeeCCCccccc
Q psy5462         144 YMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~  160 (182)
                      ..++.+++.+|++..+.
T Consensus       240 ~sGIrvTIVRPG~L~tp  256 (576)
T PLN03209        240 ASGLPYTIVRPGGMERP  256 (576)
T ss_pred             HcCCCEEEEECCeecCC
Confidence            77778888899876544

>PLN02214 cinnamoyl-CoA reductase

Probab=99.13  E-value=1e-09  Score=85.43  Aligned_cols=135  Identities=14%  Similarity=0.039  Sum_probs=95.9

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+.+....           ...++.++.+|++|.+++.++++      .+|++||+|+...        
T Consensus        28 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~Vih~A~~~~--------   93 (342)
T PLN02214         28 KILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------GCDGVFHTASPVT--------   93 (342)
T ss_pred             HHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh------cCCEEEEecCCCC--------
Confidence            4577788888766543221           12357889999999998887765      3799999998641        


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----C-----------------CCchhhhhHHHH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----V-----------------NVSAYFASKYGV  131 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----~-----------------~~~~y~~sKaa~  131 (182)
                       +++...+++|+.++.++++++.+    .+.++||++||..+.++.    +                 +...|+.+|.+.
T Consensus        94 -~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~a  168 (342)
T PLN02214         94 -DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVA  168 (342)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHH
Confidence             12456789999999999999864    344689999996543321    0                 234799999999


Q ss_pred             HHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         132 TENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       132 ~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+++.++.+.+   .++.+..|.....+
T Consensus       169 E~~~~~~~~~~g---~~~v~lRp~~vyGp  194 (342)
T PLN02214        169 EQAAWETAKEKG---VDLVVLNPVLVLGP  194 (342)
T ss_pred             HHHHHHHHHHcC---CcEEEEeCCceECC
Confidence            999999887753   35566666544443

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.11  E-value=2.6e-09  Score=82.84  Aligned_cols=127  Identities=14%  Similarity=0.179  Sum_probs=90.4

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+......           .+.++.++.+|++|.+++.++++.    .++|+|||+|+......    .
T Consensus        18 ~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~d~vvh~a~~~~~~~----~   89 (338)
T PRK10675         18 VQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD----HAIDTVIHFAGLKAVGE----S   89 (338)
T ss_pred             HHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc----CCCCEEEECCccccccc----h
Confidence            4567778888776432111           123567889999999998888764    36999999998754322    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------cCCCchhhhhHHHHHHHHHHHHh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------AVNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .+.....+++|+.++.++++++.    +.+.+++|++||...+..            ..+...|+.+|.+.+.+++.++.
T Consensus        90 ~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~  165 (338)
T PRK10675         90 VQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK  165 (338)
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHH
Confidence            23345678999999999988764    344568999999754311            02367999999999999999976


Q ss_pred             hh
Q psy5462         141 FS  142 (182)
Q Consensus       141 e~  142 (182)
                      +.
T Consensus       166 ~~  167 (338)
T PRK10675        166 AQ  167 (338)
T ss_pred             hc
Confidence            63

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.11  E-value=2.2e-09  Score=83.92  Aligned_cols=141  Identities=14%  Similarity=0.078  Sum_probs=95.6

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC-cccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS-VLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~-~~~~~~   73 (182)
                      ++|.++|+.|..+.+....         .+.++.++.+|++|.+++.++++      .+|+|||+|+...... ....++
T Consensus        28 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~Vih~A~~~~~~~~~~~~~~  101 (353)
T PLN02896         28 KLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK------GCDGVFHVAASMEFDVSSDHNNI  101 (353)
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc------CCCEEEECCccccCCccccccch
Confidence            4567788888776543211         13568899999999998877764      3799999999765431 122233


Q ss_pred             HHH--HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-------------------------CCCchhhh
Q psy5462          74 HEI--ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-------------------------VNVSAYFA  126 (182)
Q Consensus        74 ~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-------------------------~~~~~y~~  126 (182)
                      +.+  ...++.|+.++.++++++.+..   +.++||++||.+.+...                         ++...|+.
T Consensus       102 ~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~  178 (353)
T PLN02896        102 EEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVL  178 (353)
T ss_pred             hhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHH
Confidence            333  4567788899999999986531   24689999997654210                         01137999


Q ss_pred             hHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462         127 SKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       127 sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +|.+.+.+++.++.+.+   .++.+..|..
T Consensus       179 sK~~~E~~~~~~~~~~~---~~~~~lR~~~  205 (353)
T PLN02896        179 SKLLTEEAAFKYAKENG---IDLVSVITTT  205 (353)
T ss_pred             HHHHHHHHHHHHHHHcC---CeEEEEcCCc
Confidence            99999999999887754   3455555543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.08  E-value=3.8e-09  Score=80.89  Aligned_cols=116  Identities=14%  Similarity=0.076  Sum_probs=85.1

Q ss_pred             eeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCe
Q psy5462          26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGH  105 (182)
Q Consensus        26 ~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  105 (182)
                      ++.++.+|++|++++.++++..    ++|+|||+|+.....    .+.+..+..+++|+.++.++++++...+.   +.+
T Consensus        51 ~~~~~~~Dl~~~~~~~~~~~~~----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~  119 (317)
T TIGR01181        51 RYRFVKGDIGDRELVSRLFTEH----QPDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFR  119 (317)
T ss_pred             CcEEEEcCCcCHHHHHHHHhhc----CCCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---Cce
Confidence            6788999999999999888763    489999999875432    23445667899999999999998865321   348


Q ss_pred             EEEEeccccccc------------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462         106 IVCISSIAALTA------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       106 ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      +|++||...+.+            ..+...|+.+|.+.+.+++.++.+.+.   ++.+..|.
T Consensus       120 ~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~---~~~i~R~~  178 (317)
T TIGR01181       120 FHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGL---PALITRCS  178 (317)
T ss_pred             EEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCC---CeEEEEec
Confidence            999998553221            123457999999999999998887542   44444444

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.07  E-value=2.2e-09  Score=83.79  Aligned_cols=140  Identities=12%  Similarity=0.018  Sum_probs=95.9

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+......            ...++.++.+|++|.+.+.++++      .+|++||+|+.....   . 
T Consensus        23 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------~~d~ViH~A~~~~~~---~-   92 (351)
T PLN02650         23 MRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------GCTGVFHVATPMDFE---S-   92 (351)
T ss_pred             HHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------CCCEEEEeCCCCCCC---C-
Confidence            4567778888766533211            11357889999999998887765      379999999864321   1 


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----C------------------CCchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----V------------------NVSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----~------------------~~~~y~~sKa  129 (182)
                       .+.+...+++|+.++.++++++.+..   ..++||++||...+.+.    +                  +...|+.+|.
T Consensus        93 -~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~  168 (351)
T PLN02650         93 -KDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKT  168 (351)
T ss_pred             -CCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHH
Confidence             12235678999999999999986531   13589999987543210    0                  1237999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+++.++.+.+   .++.+..|.....+
T Consensus       169 ~~E~~~~~~~~~~g---i~~~ilRp~~v~Gp  196 (351)
T PLN02650        169 LAEKAAWKYAAENG---LDFISIIPTLVVGP  196 (351)
T ss_pred             HHHHHHHHHHHHcC---CeEEEECCCceECC
Confidence            99999999988743   35566666654444

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.06  E-value=2.7e-09  Score=82.34  Aligned_cols=140  Identities=16%  Similarity=0.047  Sum_probs=96.2

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+.+....            ...++.++.+|++|++++.++++      .+|++||+|+......    
T Consensus        23 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~vih~A~~~~~~~----   92 (322)
T PLN02986         23 KLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------GCDAVFHTASPVFFTV----   92 (322)
T ss_pred             HHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------CCCEEEEeCCCcCCCC----
Confidence            4567788888755433221            12468889999999998887776      3799999998743211    


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccC---------------------CCchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAV---------------------NVSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~---------------------~~~~y~~sKa  129 (182)
                       .+.....+++|+.++.++++++...   .+.++||++||.+++. +.+                     ....|+.+|.
T Consensus        93 -~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~  168 (322)
T PLN02986         93 -KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKI  168 (322)
T ss_pred             -CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHH
Confidence             1223467899999999999987532   1346899999976431 110                     1356999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+++.+..+.+   .++.+..|.....+
T Consensus       169 ~aE~~~~~~~~~~~---~~~~~lrp~~v~Gp  196 (322)
T PLN02986        169 LAENAAWEFAKDNG---IDMVVLNPGFICGP  196 (322)
T ss_pred             HHHHHHHHHHHHhC---CeEEEEcccceeCC
Confidence            99999998877643   45666666655444

>KOG4022|consensus

Probab=99.05  E-value=5.8e-09  Score=71.28  Aligned_cols=151  Identities=14%  Similarity=0.092  Sum_probs=110.3

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cC--CccEEEEcccCCCCCCcccCC-HHHHHHHH
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IG--YVDILINNAGIVASSSVLAHT-DHEIERIM   80 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--~id~li~~ag~~~~~~~~~~~-~~~~~~~~   80 (182)
                      .+.+++++|..++-..++..+.-..+..|-+-.++-+.+++++.+ ++  ++|.+++.||.+..+.-...+ .+.-+-+|
T Consensus        22 ~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMw  101 (236)
T KOG4022|consen   22 FFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMW  101 (236)
T ss_pred             HHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHH
Confidence            455677888877766666666677788888888888899999888 54  699999999887655432111 23445566


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC--------Cccceeee
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY--------MLWGTTVT  152 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~--------~~~~i~v~  152 (182)
                      .-.++......+.+..+++.  +|-+-..+.-++..+.|++..|+++|+|+..++++|+.+-..        ...|++..
T Consensus       102 KQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLD  179 (236)
T KOG4022|consen  102 KQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLD  179 (236)
T ss_pred             HHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeecc
Confidence            66677766666766666643  455555666667779999999999999999999999988332        34577778


Q ss_pred             CCCcc
Q psy5462         153 TPLRS  157 (182)
Q Consensus       153 ~~~~~  157 (182)
                      +|++-
T Consensus       180 TPMNR  184 (236)
T KOG4022|consen  180 TPMNR  184 (236)
T ss_pred             Ccccc
Confidence            88853

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.01  E-value=1.1e-08  Score=78.71  Aligned_cols=137  Identities=12%  Similarity=0.128  Sum_probs=93.1

Q ss_pred             cccccccccceeccCCCCC-------C--CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------K--THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+......       .  ..++.++.+|+++++++.++++.    +++|++||+||......    ..+
T Consensus        17 ~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~vv~~ag~~~~~~----~~~   88 (328)
T TIGR01179        17 RQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE----HKIDAVIHFAGLIAVGE----SVQ   88 (328)
T ss_pred             HHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh----CCCcEEEECccccCcch----hhc
Confidence            3466677777655321111       0  01567889999999999988875    46999999999754322    223


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +....+.+|+.++..+++++..    .+..++|++||...+..           ..+...|+.+|++.+.+++.++.+..
T Consensus        89 ~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~  164 (328)
T TIGR01179        89 DPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADP  164 (328)
T ss_pred             CchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhcc
Confidence            4456788999999999987643    34468999988654321           11346899999999999999987622


Q ss_pred             CCccceeeeCC
Q psy5462         144 YMLWGTTVTTP  154 (182)
Q Consensus       144 ~~~~~i~v~~~  154 (182)
                        ..++.+..|
T Consensus       165 --~~~~~ilR~  173 (328)
T TIGR01179       165 --GLSYVILRY  173 (328)
T ss_pred             --CCCEEEEec
Confidence              234455544

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.00  E-value=8e-09  Score=80.67  Aligned_cols=137  Identities=9%  Similarity=0.034  Sum_probs=93.8

Q ss_pred             cccccccccceeccCCCCC---------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..++.....               ...++.++.+|+.|.+.+..+++      .+|+|||.|+...... 
T Consensus        33 ~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~------~~d~ViHlAa~~~~~~-  105 (348)
T PRK15181         33 EELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK------NVDYVLHQAALGSVPR-  105 (348)
T ss_pred             HHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh------CCCEEEECccccCchh-
Confidence            4567778888777643211               01357789999999988777765      3799999998754321 


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~  137 (182)
                         +.++....+++|+.++.++++++..    .+..++|++||...+...           .+...|+.+|.+.+.+++.
T Consensus       106 ---~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~  178 (348)
T PRK15181        106 ---SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADV  178 (348)
T ss_pred             ---hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Confidence               2223345688999999999998743    344689999987644211           1346899999999999998


Q ss_pred             HHhhhCCCccceeeeCCCcc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~  157 (182)
                      ++.+.+   .++.+..|...
T Consensus       179 ~~~~~~---~~~~~lR~~~v  195 (348)
T PRK15181        179 FARSYE---FNAIGLRYFNV  195 (348)
T ss_pred             HHHHhC---CCEEEEEecce
Confidence            877643   34444445433

>KOG1371|consensus

Probab=98.97  E-value=4.1e-09  Score=79.45  Aligned_cols=141  Identities=13%  Similarity=0.134  Sum_probs=108.5

Q ss_pred             cccccccccceeccCCCC-------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP-------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      -+|.++|++|.+++...+             ..+.++.++.+|++|.+.++++|+..    ++|.++|-|+....+.   
T Consensus        20 l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----~fd~V~Hfa~~~~vge---   92 (343)
T KOG1371|consen   20 LALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----KFDAVMHFAALAAVGE---   92 (343)
T ss_pred             HHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc----CCceEEeehhhhccch---
Confidence            357889999999984443             12478999999999999999999986    5999999999876554   


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccC-CCchhhhhHHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAV-NVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~-~~~~y~~sKaa~~~~~~~l  138 (182)
                       +.+........|+.|+++++..+..    .+...+|+.||...+-           +.. +...|+.+|.+++.++..+
T Consensus        93 -S~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~  167 (343)
T KOG1371|consen   93 -SMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDY  167 (343)
T ss_pred             -hhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhh
Confidence             4444467788999999999998754    3457889988866431           112 5689999999999999999


Q ss_pred             HhhhCCCccceeeeCCCc
Q psy5462         139 KCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~  156 (182)
                      .....-....+|-.+|.+
T Consensus       168 ~~~~~~~~~~LRyfn~~g  185 (343)
T KOG1371|consen  168 NKAYGWKVTGLRYFNVIG  185 (343)
T ss_pred             hccccceEEEEEeccccC
Confidence            888664445666666654

>PLN02583 cinnamoyl-CoA reductase

Probab=98.97  E-value=1.4e-08  Score=77.69  Aligned_cols=139  Identities=10%  Similarity=-0.096  Sum_probs=95.2

Q ss_pred             cccccccccceeccCCC---------C---CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL---------P---TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~---~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|..+.+..         .   ..+.++.++.+|++|.+++..++.      ..|.++|.++....     .
T Consensus        24 ~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------~~d~v~~~~~~~~~-----~   92 (297)
T PLN02583         24 KRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------GCSGLFCCFDPPSD-----Y   92 (297)
T ss_pred             HHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------CCCEEEEeCccCCc-----c
Confidence            46778899888765421         1   113468889999999998865543      46888886643221     1


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---C-----------C--------CchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---V-----------N--------VSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---~-----------~--------~~~y~~sKa  129 (182)
                       ..+++..+++|+.+++++++++.+.+   +.++||++||.++....   +           .        ...|+.+|.
T Consensus        93 -~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~  168 (297)
T PLN02583         93 -PSYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKT  168 (297)
T ss_pred             -cccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHH
Confidence             12467889999999999999997643   23699999998654211   0           0        016999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ..+.++..++.+.   ...+.+.+|.++..+
T Consensus       169 ~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp  196 (297)
T PLN02583        169 LSEKTAWALAMDR---GVNMVSINAGLLMGP  196 (297)
T ss_pred             HHHHHHHHHHHHh---CCcEEEEcCCcccCC
Confidence            9999998887663   346666677655443

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.97  E-value=1.1e-08  Score=78.83  Aligned_cols=140  Identities=13%  Similarity=0.046  Sum_probs=95.4

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+......            ...++.++.+|++|++.+..+++      ++|++||+|+..... .  .
T Consensus        22 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~Vih~A~~~~~~-~--~   92 (322)
T PLN02662         22 KLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------GCEGVFHTASPFYHD-V--T   92 (322)
T ss_pred             HHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc------CCCEEEEeCCcccCC-C--C
Confidence            4577788888766533211            12467899999999988877765      479999999865321 1  1


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-c-ccC--------------C------CchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-T-AAV--------------N------VSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~-~~~--------------~------~~~y~~sKa  129 (182)
                      .+  ....+++|+.++.++++++....   +..+||++||.++. + +.+              +      ...|+.+|.
T Consensus        93 ~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~  167 (322)
T PLN02662         93 DP--QAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKT  167 (322)
T ss_pred             Ch--HHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHH
Confidence            11  24678999999999999986421   34689999997632 2 110              0      147999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+++.+..+.+   .++.+..|.....+
T Consensus       168 ~~E~~~~~~~~~~~---~~~~~lRp~~v~Gp  195 (322)
T PLN02662        168 LAEEAAWKFAKENG---IDMVTINPAMVIGP  195 (322)
T ss_pred             HHHHHHHHHHHHcC---CcEEEEeCCcccCC
Confidence            99999988877643   36666666655444

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=98.96  E-value=1.4e-08  Score=78.28  Aligned_cols=135  Identities=15%  Similarity=0.117  Sum_probs=94.6

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++.....    ...+.++.+|++|.+++.++++      .+|++||+|+....      ..++++..
T Consensus        18 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~------~~d~vi~~a~~~~~------~~~~~~~~   85 (328)
T TIGR03466        18 RLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVA------GCRALFHVAADYRL------WAPDPEEM   85 (328)
T ss_pred             HHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHh------CCCEEEEeceeccc------CCCCHHHH
Confidence            45677788888777543221    2357889999999998877765      47999999975421      11235667


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC---------------CCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV---------------NVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~---------------~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      +++|+.++.++++++..    .+.+++|++||...+.+.+               ....|+.+|.+.+.+++.++.+.+ 
T Consensus        86 ~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-  160 (328)
T TIGR03466        86 YAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG-  160 (328)
T ss_pred             HHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcC-
Confidence            88999999999998754    3456999999976543111               135799999999999999887643 


Q ss_pred             CccceeeeCCCcc
Q psy5462         145 MLWGTTVTTPLRS  157 (182)
Q Consensus       145 ~~~~i~v~~~~~~  157 (182)
                        .++.+..|...
T Consensus       161 --~~~~ilR~~~~  171 (328)
T TIGR03466       161 --LPVVIVNPSTP  171 (328)
T ss_pred             --CCEEEEeCCcc
Confidence              35555555543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.94  E-value=8.3e-09  Score=78.22  Aligned_cols=122  Identities=18%  Similarity=0.193  Sum_probs=89.5

Q ss_pred             ccccccc--ccceeccCCCCCC-------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHI--HGILFIPWCLPTK-------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g--~~v~~~~~~~~~~-------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|+++|  ..+.+++......       .....++.+|++|++++.++++.      .|++||+|+......     ..
T Consensus        15 ~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g------~d~V~H~Aa~~~~~~-----~~   83 (280)
T PF01073_consen   15 RQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEG------VDVVFHTAAPVPPWG-----DY   83 (280)
T ss_pred             HHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcC------CceEEEeCccccccC-----cc
Confidence            4677888  6677666433221       12233899999999999998874      699999998764422     33


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---c--------------CCCchhhhhHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---A--------------VNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---~--------------~~~~~y~~sKaa~~~~~~~  137 (182)
                      ..+.++++|+.|+.++++++..    .+-.++|++||.+...+   .              .....|+.||+.-+.++..
T Consensus        84 ~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~  159 (280)
T PF01073_consen   84 PPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLE  159 (280)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHh
Confidence            4567899999999999999864    35679999999876433   0              1345899999999998877


Q ss_pred             HHh
Q psy5462         138 IKC  140 (182)
Q Consensus       138 la~  140 (182)
                      ...
T Consensus       160 a~~  162 (280)
T PF01073_consen  160 ANG  162 (280)
T ss_pred             hcc
Confidence            654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.94  E-value=2.1e-08  Score=75.74  Aligned_cols=152  Identities=10%  Similarity=-0.006  Sum_probs=113.0

Q ss_pred             ccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cC--------------CccEEEEcccC
Q psy5462           5 RTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IG--------------YVDILINNAGI   62 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--------------~id~li~~ag~   62 (182)
                      .|..||.-|.+......       +....+.....|..++.++...++...+ +.              .+..+|.....
T Consensus        23 DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl  102 (299)
T PF08643_consen   23 DLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSL  102 (299)
T ss_pred             HHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCC
Confidence            46677888777753321       2244577788888777777776666655 43              34455554433


Q ss_pred             C-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC--CCCeEEEEe-ccccccccCCCchhhhhHHHHHHHHHHH
Q psy5462          63 V-ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN--NTGHIVCIS-SIAALTAAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        63 ~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is-s~~~~~~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      . ..++++.++.+.|...++.|+..++.+++.++|+|+.+  .+.+||++. |+......|..+.-....+++.+|+++|
T Consensus       103 ~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~L  182 (299)
T PF08643_consen  103 SYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSL  182 (299)
T ss_pred             CCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHH
Confidence            3 45889999999999999999999999999999999982  345666665 5555667788899999999999999999


Q ss_pred             HhhhCCCccceeeeCCCc
Q psy5462         139 KCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~  156 (182)
                      ++|+.+..+++.....|.
T Consensus       183 rrEl~~~~I~V~~i~LG~  200 (299)
T PF08643_consen  183 RRELRPHNIDVTQIKLGN  200 (299)
T ss_pred             HHHhhhcCCceEEEEeee
Confidence            999997666766666554

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.87  E-value=2.5e-08  Score=76.41  Aligned_cols=138  Identities=12%  Similarity=0.076  Sum_probs=88.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh---cCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK---IGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.+..+...............+|+.|..+.+.+++.+.+   ++++|+|||+|+......   .+.   ...+
T Consensus        17 ~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~---~~~---~~~~   90 (308)
T PRK11150         17 KALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTE---WDG---KYMM   90 (308)
T ss_pred             HHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcC---CCh---HHHH
Confidence            4567778765555433322111123456788887777666665532   457999999998644321   122   3468


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.|+.++.++++++..    .+ .++|++||...+..           ..+...|+.+|.+.+.+++.++.+..   .++
T Consensus        91 ~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~  162 (308)
T PRK11150         91 DNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEAN---SQI  162 (308)
T ss_pred             HHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCE
Confidence            9999999999999853    23 47999999764321           12346899999999999988876532   344


Q ss_pred             eeeCCC
Q psy5462         150 TVTTPL  155 (182)
Q Consensus       150 ~v~~~~  155 (182)
                      .+..|.
T Consensus       163 ~~lR~~  168 (308)
T PRK11150        163 CGFRYF  168 (308)
T ss_pred             EEEeee
Confidence            444444

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.82  E-value=5.5e-08  Score=71.40  Aligned_cols=138  Identities=17%  Similarity=0.228  Sum_probs=99.4

Q ss_pred             cccccccccceeccCCCCCCC-----ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT-----HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +.|.++|+.+..+...-.+..     .++.++.+|++|.+.++++++..    .+|.+||+|+....    ..+.+....
T Consensus        16 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~----~~d~vi~~a~~~~~----~~~~~~~~~   87 (236)
T PF01370_consen   16 RQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA----NIDVVIHLAAFSSN----PESFEDPEE   87 (236)
T ss_dssp             HHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH----TESEEEEEBSSSSH----HHHHHSHHH
T ss_pred             HHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc----CceEEEEeeccccc----ccccccccc
Confidence            456778888776654443321     27899999999999999999986    59999999987531    112355667


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .++.|+.++.++++++..    .+..++|++||...+...           .+...|+.+|...+.+.+.+..+...   
T Consensus        88 ~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~---  160 (236)
T PF01370_consen   88 IIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL---  160 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS---
T ss_pred             cccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence            788899999999888854    344699999996543221           13467999999999999999887542   


Q ss_pred             ceeeeCCCc
Q psy5462         148 GTTVTTPLR  156 (182)
Q Consensus       148 ~i~v~~~~~  156 (182)
                      ++.+..|..
T Consensus       161 ~~~~~R~~~  169 (236)
T PF01370_consen  161 RVTILRPPN  169 (236)
T ss_dssp             EEEEEEESE
T ss_pred             ccccccccc
Confidence            444444443

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=98.80  E-value=1.4e-07  Score=74.73  Aligned_cols=138  Identities=13%  Similarity=0.145  Sum_probs=90.1

Q ss_pred             cccccc-cccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGH-IHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~-g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++ |++|..++.....           ...++.++.+|++|.+.+.++++.      +|+|||+|+...+..... 
T Consensus        32 ~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~------~d~ViHlAa~~~~~~~~~-  104 (386)
T PLN02427         32 EKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKM------ADLTINLAAICTPADYNT-  104 (386)
T ss_pred             HHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhc------CCEEEEcccccChhhhhh-
Confidence            346666 5777777632210           123688999999999988777653      799999998754322211 


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---------------------------------
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---------------------------------  118 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---------------------------------  118 (182)
                      ++   ...+..|+.++.++++++..    .+ .++|++||...+-..                                 
T Consensus       105 ~~---~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~  176 (386)
T PLN02427        105 RP---LDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIE  176 (386)
T ss_pred             Ch---HHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCC
Confidence            12   23456799999999988743    23 589999997533110                                 


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462         119 VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       119 ~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      .+...|+.+|.+.+.++..++...+   .++.+..|.....
T Consensus       177 ~~~~~Y~~sK~~~E~~~~~~~~~~g---~~~~ilR~~~vyG  214 (386)
T PLN02427        177 KQRWSYACAKQLIERLIYAEGAENG---LEFTIVRPFNWIG  214 (386)
T ss_pred             ccccchHHHHHHHHHHHHHHHhhcC---CceEEecccceeC
Confidence            0123699999999999988766533   3556666654433

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.79  E-value=2.2e-07  Score=78.61  Aligned_cols=119  Identities=11%  Similarity=0.038  Sum_probs=84.5

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-C
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-T  103 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~  103 (182)
                      .++.++.+|++|.+.+..++..    .++|+|||+|+......    +..+....+++|+.++.++++++..    .+ .
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~v  124 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLIT----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKV----TGQI  124 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhh----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHh----cCCC
Confidence            4688999999999887776543    36999999999764321    2223345678999999999988743    23 4


Q ss_pred             CeEEEEeccccccc--------------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         104 GHIVCISSIAALTA--------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       104 ~~ii~iss~~~~~~--------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      .++|++||...+-.              ..+...|+.+|.+.+.+++.++.+.+   .++.+..|....
T Consensus       125 kr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~---l~~vilR~~~Vy  190 (668)
T PLN02260        125 RRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG---LPVITTRGNNVY  190 (668)
T ss_pred             cEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHcC---CCEEEECccccc
Confidence            68999999754321              11346899999999999998877643   355555555433

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.77  E-value=8.6e-08  Score=71.86  Aligned_cols=95  Identities=20%  Similarity=0.196  Sum_probs=77.4

Q ss_pred             ccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEec
Q psy5462          32 ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISS  111 (182)
Q Consensus        32 ~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss  111 (182)
                      +|++|++.+.+++.+.    ++|+|||+|++.....    ...+-+..+.+|..++.++.+++...     +..+|++|+
T Consensus        34 ~Ditd~~~v~~~i~~~----~PDvVIn~AAyt~vD~----aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiST  100 (281)
T COG1091          34 LDITDPDAVLEVIRET----RPDVVINAAAYTAVDK----AESEPELAFAVNATGAENLARAAAEV-----GARLVHIST  100 (281)
T ss_pred             ccccChHHHHHHHHhh----CCCEEEECcccccccc----ccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeec
Confidence            8999999999999986    6999999999876543    33446678999999999999998643     579999998


Q ss_pred             ccccccc-----------CCCchhhhhHHHHHHHHHHHH
Q psy5462         112 IAALTAA-----------VNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus       112 ~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la  139 (182)
                      ...+.|.           .+...||.||.+.+..++...
T Consensus       101 DyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         101 DYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             ceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence            6654332           246899999999999998775

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.76  E-value=2.2e-07  Score=73.22  Aligned_cols=137  Identities=18%  Similarity=0.087  Sum_probs=91.2

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++....    ......++.+|++|.+.+..+++      ++|+|||+|+......+....   ....
T Consensus        39 ~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~Vih~Aa~~~~~~~~~~~---~~~~  109 (370)
T PLN02695         39 RRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTK------GVDHVFNLAADMGGMGFIQSN---HSVI  109 (370)
T ss_pred             HHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHh------CCCEEEEcccccCCccccccC---chhh
Confidence            4567789988888753221    11135678899999887766653      479999999865432221111   2335


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------------ccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------------AAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------------~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      +..|+.++.++++++..    .+..++|++||...+.                 +..+...|+.+|.+.+.+++.++...
T Consensus       110 ~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~  185 (370)
T PLN02695        110 MYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF  185 (370)
T ss_pred             HHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            67899999999998743    3446899999865321                 12245689999999999999887764


Q ss_pred             CCCccceeeeCCCc
Q psy5462         143 GYMLWGTTVTTPLR  156 (182)
Q Consensus       143 ~~~~~~i~v~~~~~  156 (182)
                      +   .++.+..|..
T Consensus       186 g---~~~~ilR~~~  196 (370)
T PLN02695        186 G---IECRIGRFHN  196 (370)
T ss_pred             C---CCEEEEEECC
Confidence            4   2444444443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.72  E-value=1.8e-07  Score=71.54  Aligned_cols=116  Identities=12%  Similarity=0.066  Sum_probs=80.1

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++| .+..++...       ..+.+|++|.+.+.++++..    ++|++||+|+......    ..++-+..+.+|
T Consensus        18 ~~L~~~g-~V~~~~~~~-------~~~~~Dl~d~~~~~~~~~~~----~~D~Vih~Aa~~~~~~----~~~~~~~~~~~N   81 (299)
T PRK09987         18 RALAPLG-NLIALDVHS-------TDYCGDFSNPEGVAETVRKI----RPDVIVNAAAHTAVDK----AESEPEFAQLLN   81 (299)
T ss_pred             HHhhccC-CEEEecccc-------ccccCCCCCHHHHHHHHHhc----CCCEEEECCccCCcch----hhcCHHHHHHHH
Confidence            3456666 455444321       13467999999999888864    5899999999765422    122335567899


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHh
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      +.++.++++++..    .+ .++|++||...+.+           ..+...|+.+|.+.+.+++.+..
T Consensus        82 ~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~  144 (299)
T PRK09987         82 ATSVEAIAKAANE----VG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCA  144 (299)
T ss_pred             HHHHHHHHHHHHH----cC-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence            9999999998854    23 58999998654311           12346899999999999876643

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.71  E-value=2.6e-07  Score=70.07  Aligned_cols=110  Identities=15%  Similarity=0.205  Sum_probs=79.1

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHh
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL   84 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   84 (182)
                      +|.++|+++..+.+.           .+|+.+.+++.++++..    ++|++||+|+......    .....+..+++|+
T Consensus        18 ~l~~~g~~v~~~~r~-----------~~d~~~~~~~~~~~~~~----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~   78 (287)
T TIGR01214        18 QLSPEGRVVVALTSS-----------QLDLTDPEALERLLRAI----RPDAVVNTAAYTDVDG----AESDPEKAFAVNA   78 (287)
T ss_pred             HHHhcCCEEEEeCCc-----------ccCCCCHHHHHHHHHhC----CCCEEEECCccccccc----cccCHHHHHHHHH
Confidence            455667777666542           58999999999988764    5899999998753221    1223456778999


Q ss_pred             HHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHH
Q psy5462          85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      .++.++++++..    .+ .++|++||...+.+           ..+...|+.+|.+.+.+++.+
T Consensus        79 ~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~  138 (287)
T TIGR01214        79 LAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA  138 (287)
T ss_pred             HHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence            999999998743    23 48999998654322           113468999999999888865

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1502|consensus

Probab=98.68  E-value=5.1e-07  Score=68.92  Aligned_cols=137  Identities=15%  Similarity=0.001  Sum_probs=96.7

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      .+|+++||.|....+...            ....+...+..|++|+++++..++.      .|+++|.|........   
T Consensus        24 k~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g------cdgVfH~Asp~~~~~~---   94 (327)
T KOG1502|consen   24 KLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG------CDGVFHTASPVDFDLE---   94 (327)
T ss_pred             HHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC------CCEEEEeCccCCCCCC---
Confidence            578899999988864443            3456799999999999999998885      6999999987644321   


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-CC-----------C----------chhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VN-----------V----------SAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-~~-----------~----------~~y~~sKa  129 (182)
                      +  .-.+.+...+.|+.++++++...   +.-.+||++||.++.... +.           +          ..|..+|.
T Consensus        95 ~--~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~  169 (327)
T KOG1502|consen   95 D--PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKT  169 (327)
T ss_pred             C--cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHH
Confidence            1  12357888999999999999643   124699999998876533 11           1          36777887


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .-+.-+-.++.|-   ...+.+.+|..+
T Consensus       170 lAEkaAw~fa~e~---~~~lv~inP~lV  194 (327)
T KOG1502|consen  170 LAEKAAWEFAKEN---GLDLVTINPGLV  194 (327)
T ss_pred             HHHHHHHHHHHhC---CccEEEecCCce
Confidence            6666666666664   335555555543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.66  E-value=7.8e-08  Score=72.49  Aligned_cols=101  Identities=18%  Similarity=0.187  Sum_probs=73.1

Q ss_pred             EEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE
Q psy5462          28 VYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV  107 (182)
Q Consensus        28 ~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii  107 (182)
                      ..+-+|++|.+.+.++++..    ++|+++|.|+.-.....+.    ...+.+++|+.|+.++++++..+    +-.++|
T Consensus        57 ~~vigDvrd~~~l~~~~~~~----~pdiVfHaAA~KhVpl~E~----~p~eav~tNv~GT~nv~~aa~~~----~v~~~v  124 (293)
T PF02719_consen   57 VPVIGDVRDKERLNRIFEEY----KPDIVFHAAALKHVPLMED----NPFEAVKTNVLGTQNVAEAAIEH----GVERFV  124 (293)
T ss_dssp             E--CTSCCHHHHHHHHTT------T-SEEEE------HHHHCC----CHHHHHHHHCHHHHHHHHHHHHT----T-SEEE
T ss_pred             CceeecccCHHHHHHHHhhc----CCCEEEEChhcCCCChHHh----CHHHHHHHHHHHHHHHHHHHHHc----CCCEEE
Confidence            45688999999999998864    6999999999855433222    34567899999999999999764    456999


Q ss_pred             EEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         108 CISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       108 ~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +||+.-+..|   -+.||+||...+.++.+.+...+
T Consensus       125 ~ISTDKAv~P---tnvmGatKrlaE~l~~~~~~~~~  157 (293)
T PF02719_consen  125 FISTDKAVNP---TNVMGATKRLAEKLVQAANQYSG  157 (293)
T ss_dssp             EEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSS
T ss_pred             EccccccCCC---CcHHHHHHHHHHHHHHHHhhhCC
Confidence            9999887665   48999999999999999998863

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.66  E-value=4.7e-07  Score=69.18  Aligned_cols=128  Identities=11%  Similarity=0.074  Sum_probs=84.4

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHh
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL   84 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   84 (182)
                      .|.++|+.+..+..          ...+|++|.+++.++++..    ++|++||+|+.......   ..++....+++|+
T Consensus        16 ~L~~~g~~v~~~~~----------~~~~Dl~~~~~l~~~~~~~----~~d~Vih~A~~~~~~~~---~~~~~~~~~~~n~   78 (306)
T PLN02725         16 KLEALGFTNLVLRT----------HKELDLTRQADVEAFFAKE----KPTYVILAAAKVGGIHA---NMTYPADFIRENL   78 (306)
T ss_pred             HHHhCCCcEEEeec----------cccCCCCCHHHHHHHHhcc----CCCEEEEeeeeecccch---hhhCcHHHHHHHh
Confidence            45566666554321          2368999999998887763    58999999987532110   1122334678899


Q ss_pred             HHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-------------C--C-CchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-------------V--N-VSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-------------~--~-~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .++.++++++..    .+-.++|++||...+.+.             +  + ...|+.+|.+.+.+++.+..+..   .+
T Consensus        79 ~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~---~~  151 (306)
T PLN02725         79 QIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYG---WD  151 (306)
T ss_pred             HHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhC---CC
Confidence            999999999854    234689999996543211             1  1 12599999999999988877653   24


Q ss_pred             eeeeCCCc
Q psy5462         149 TTVTTPLR  156 (182)
Q Consensus       149 i~v~~~~~  156 (182)
                      +.+..|..
T Consensus       152 ~~~~R~~~  159 (306)
T PLN02725        152 AISGMPTN  159 (306)
T ss_pred             EEEEEecc
Confidence            45555443

>PLN02686 cinnamoyl-CoA reductase

Probab=98.64  E-value=3.6e-07  Score=71.93  Aligned_cols=142  Identities=9%  Similarity=0.000  Sum_probs=93.2

Q ss_pred             cccccccccceeccCCCCC---------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+......               ...++.++.+|++|.+++.++++.      +|.+||.|+.......
T Consensus        71 ~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~------~d~V~hlA~~~~~~~~  144 (367)
T PLN02686         71 DRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG------CAGVFHTSAFVDPAGL  144 (367)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh------ccEEEecCeeeccccc
Confidence            4577788888765432110               013578899999999999888775      5888898887543221


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc-ccc----------------------cCCCchhh
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTA----------------------AVNVSAYF  125 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~-~~~----------------------~~~~~~y~  125 (182)
                      ...    .....++|+.++.++++++...   .+-.++|++||..+ .++                      ..+...|+
T Consensus       145 ~~~----~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~  217 (367)
T PLN02686        145 SGY----TKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYA  217 (367)
T ss_pred             ccc----cchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHH
Confidence            111    1234567899999999987532   13458999999631 110                      01234799


Q ss_pred             hhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         126 ASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       126 ~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      .+|.+.+.+++.++.+.   ..++.+..|.+...+.
T Consensus       218 ~sK~~~E~~~~~~~~~~---gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        218 LGKLKAEKAAWRAARGK---GLKLATICPALVTGPG  250 (367)
T ss_pred             HHHHHHHHHHHHHHHhc---CceEEEEcCCceECCC
Confidence            99999999999888774   3466666776655553

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.64  E-value=6.3e-07  Score=68.70  Aligned_cols=123  Identities=11%  Similarity=0.099  Sum_probs=81.4

Q ss_pred             cccccccc-cceeccCCCCCC---CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIH-GILFIPWCLPTK---THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~-~v~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+ .+..+.......   ......+..|+++.+.++.+.+.  .++++|++||+|+....      ..++....
T Consensus        16 ~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~D~vvh~A~~~~~------~~~~~~~~   87 (314)
T TIGR02197        16 KALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKG--AFGKIEAIFHQGACSDT------TETDGEYM   87 (314)
T ss_pred             HHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhh--ccCCCCEEEECccccCc------cccchHHH
Confidence            45667786 455554322111   01123566788888777766553  23579999999986432      22345667


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHH
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      +++|+.++.++++++..    .+ .++|++||...+..           ..+...|+.+|.+.+.+++...
T Consensus        88 ~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        88 MENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             HHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHh
Confidence            89999999999998754    23 47999999764321           1245789999999999998643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.57  E-value=8.7e-07  Score=69.14  Aligned_cols=124  Identities=15%  Similarity=0.134  Sum_probs=82.7

Q ss_pred             ccccc-cccceeccCCCC---C--CCceeEEEEccCC-CHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           5 RTTGH-IHGILFIPWCLP---T--KTHVAVYFKADVS-DKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         5 ~l~~~-g~~v~~~~~~~~---~--~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      +|.++ |+.|..++....   .  ....+.++.+|++ +.+.+.++++      ++|+|||+|+...+...    .++..
T Consensus        20 ~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~d~ViH~aa~~~~~~~----~~~p~   89 (347)
T PRK11908         20 RILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK------KCDVILPLVAIATPATY----VKQPL   89 (347)
T ss_pred             HHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc------CCCEEEECcccCChHHh----hcCcH
Confidence            34444 577777664221   1  1245888999998 6666555443      48999999987543221    22334


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------------CCCchhhhhHHHHHHHHHHHH
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------------VNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la  139 (182)
                      ..+++|+.++.++++++..    .+ .++|++||...+...                  .+...|+.+|.+.+.+++.++
T Consensus        90 ~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~  164 (347)
T PRK11908         90 RVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYG  164 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHH
Confidence            6678999999999988753    33 589999997543210                  112379999999999999988


Q ss_pred             hhhC
Q psy5462         140 CFSG  143 (182)
Q Consensus       140 ~e~~  143 (182)
                      .+..
T Consensus       165 ~~~~  168 (347)
T PRK11908        165 MEEG  168 (347)
T ss_pred             HHcC
Confidence            7643

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.57  E-value=1.1e-06  Score=67.25  Aligned_cols=137  Identities=14%  Similarity=0.149  Sum_probs=93.8

Q ss_pred             cccccccccceeccCCCCCCC---ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT---HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|++|..++.......   ..+.++.+|+++.+.+....+..   +  |.+||+|+........  .. +....+
T Consensus        18 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~--d~vih~aa~~~~~~~~--~~-~~~~~~   89 (314)
T COG0451          18 ERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGV---P--DAVIHLAAQSSVPDSN--AS-DPAEFL   89 (314)
T ss_pred             HHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcC---C--CEEEEccccCchhhhh--hh-CHHHHH
Confidence            567778999999986654433   35789999999995555554432   1  9999999986542211  11 345678


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------C--CCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------V--NVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~--~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+|+.++.++++++..    .+..++|+.||.+.+.+.           +  +...|+.+|.+.+.++.......   ..
T Consensus        90 ~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---~~  162 (314)
T COG0451          90 DVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY---GL  162 (314)
T ss_pred             HHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            9999999999999865    355789997665533321           1  11249999999999999999832   23


Q ss_pred             ceeeeCCC
Q psy5462         148 GTTVTTPL  155 (182)
Q Consensus       148 ~i~v~~~~  155 (182)
                      ++.+..|.
T Consensus       163 ~~~ilR~~  170 (314)
T COG0451         163 PVVILRPF  170 (314)
T ss_pred             CeEEEeee
Confidence            44444444

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.56  E-value=4.3e-07  Score=69.11  Aligned_cols=94  Identities=17%  Similarity=0.202  Sum_probs=65.7

Q ss_pred             EccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEe
Q psy5462          31 KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCIS  110 (182)
Q Consensus        31 ~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  110 (182)
                      .+|++|.+.+.++++..    ++|+|||+|+...+..    -.++-+..+.+|+.++.++.+.+...     +.++|++|
T Consensus        34 ~~dl~d~~~~~~~~~~~----~pd~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~~~~-----~~~li~~S  100 (286)
T PF04321_consen   34 DLDLTDPEAVAKLLEAF----KPDVVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEACKER-----GARLIHIS  100 (286)
T ss_dssp             CS-TTSHHHHHHHHHHH------SEEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEE
T ss_pred             hcCCCCHHHHHHHHHHh----CCCeEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHHHHc-----CCcEEEee
Confidence            89999999999999886    5999999998864322    23445678899999999999998642     47999999


Q ss_pred             cccccccc-----------CCCchhhhhHHHHHHHHHH
Q psy5462         111 SIAALTAA-----------VNVSAYFASKYGVTENHPS  137 (182)
Q Consensus       111 s~~~~~~~-----------~~~~~y~~sKaa~~~~~~~  137 (182)
                      |...+.+.           .+...||-+|...+..++.
T Consensus       101 Td~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~  138 (286)
T PF04321_consen  101 TDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA  138 (286)
T ss_dssp             EGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH
T ss_pred             ccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            97644332           2357999999999988887

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.55  E-value=7.3e-07  Score=75.31  Aligned_cols=134  Identities=15%  Similarity=0.103  Sum_probs=88.8

Q ss_pred             ccccc-cccceeccCCCCC-----CCceeEEEEccCCCHHH-HHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           5 RTTGH-IHGILFIPWCLPT-----KTHVAVYFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         5 ~l~~~-g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      +|.++ |++|..+++.-..     ...++.++.+|++|.++ ++++++      ++|++||+|+...+....    +...
T Consensus       334 ~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~------~~D~ViHlAa~~~~~~~~----~~~~  403 (660)
T PRK08125        334 RLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK------KCDVVLPLVAIATPIEYT----RNPL  403 (660)
T ss_pred             HHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc------CCCEEEECccccCchhhc----cCHH
Confidence            45554 6888887753321     12368889999998665 333332      489999999976543211    1233


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---------------C---CCchhhhhHHHHHHHHHHHH
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---------------V---NVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---------------~---~~~~y~~sKaa~~~~~~~la  139 (182)
                      ..+++|+.++.++++++...    + .++|++||...+-..               +   +...|+.+|.+.+.+++.++
T Consensus       404 ~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~  478 (660)
T PRK08125        404 RVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYG  478 (660)
T ss_pred             HHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHH
Confidence            56789999999999998642    3 589999996533110               0   12369999999999999988


Q ss_pred             hhhCCCccceeeeCCCc
Q psy5462         140 CFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       140 ~e~~~~~~~i~v~~~~~  156 (182)
                      .+.+.   ++.+..|..
T Consensus       479 ~~~g~---~~~ilR~~~  492 (660)
T PRK08125        479 EKEGL---RFTLFRPFN  492 (660)
T ss_pred             HhcCC---ceEEEEEce
Confidence            77542   444444443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.55  E-value=1.4e-06  Score=69.16  Aligned_cols=130  Identities=11%  Similarity=0.070  Sum_probs=87.5

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      +.|.++|+.+..+.+....            ...++.++.+|++|++++.++++...  +++|+||||++......    
T Consensus        78 ~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~--~~~D~Vi~~aa~~~~~~----  151 (390)
T PLN02657         78 RELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG--DPVDVVVSCLASRTGGV----  151 (390)
T ss_pred             HHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC--CCCcEEEECCccCCCCC----
Confidence            4567788888877654321            12468899999999999999887641  26899999987532111    


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                           ...+++|+.++.++++++.    +.+.+++|++||.....   +...|..+|...+...+.  .   ....+..+
T Consensus       152 -----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~sK~~~E~~l~~--~---~~gl~~tI  214 (390)
T PLN02657        152 -----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQRAKLKFEAELQA--L---DSDFTYSI  214 (390)
T ss_pred             -----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHHHHHHHHHHHHh--c---cCCCCEEE
Confidence                 1235678888888888764    34557899999986543   345688889888776654  1   12345566


Q ss_pred             eCCCc
Q psy5462         152 TTPLR  156 (182)
Q Consensus       152 ~~~~~  156 (182)
                      ..|..
T Consensus       215 lRp~~  219 (390)
T PLN02657        215 VRPTA  219 (390)
T ss_pred             EccHH
Confidence            66643

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.53  E-value=3.1e-06  Score=68.63  Aligned_cols=105  Identities=16%  Similarity=0.187  Sum_probs=86.8

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      ..+..++-+|+.|.+.+.++++..    ++|+++|.|+.-.....    .....+.+++|+.|+.++++++...    +-
T Consensus       301 ~~~~~~~igdVrD~~~~~~~~~~~----kvd~VfHAAA~KHVPl~----E~nP~Eai~tNV~GT~nv~~aa~~~----~V  368 (588)
T COG1086         301 ELKLRFYIGDVRDRDRVERAMEGH----KVDIVFHAAALKHVPLV----EYNPEEAIKTNVLGTENVAEAAIKN----GV  368 (588)
T ss_pred             CcceEEEecccccHHHHHHHHhcC----CCceEEEhhhhccCcch----hcCHHHHHHHhhHhHHHHHHHHHHh----CC
Confidence            467889999999999999999874    69999999998654332    2334567899999999999999653    45


Q ss_pred             CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         104 GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       104 ~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .++|++|+.-+.+|.   ..||++|...+.++++++....
T Consensus       369 ~~~V~iSTDKAV~Pt---NvmGaTKr~aE~~~~a~~~~~~  405 (588)
T COG1086         369 KKFVLISTDKAVNPT---NVMGATKRLAEKLFQAANRNVS  405 (588)
T ss_pred             CEEEEEecCcccCCc---hHhhHHHHHHHHHHHHHhhccC
Confidence            689999998887764   7999999999999999988644

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.46  E-value=2.1e-06  Score=64.01  Aligned_cols=139  Identities=12%  Similarity=0.016  Sum_probs=81.5

Q ss_pred             ccccccccceeccCCCC------CCCceeEEEEccCCCH-HHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           5 RTTGHIHGILFIPWCLP------TKTHVAVYFKADVSDK-AEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~------~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      +|.++|+.+..+.+...      ..+.++.++.+|++|. +.+.+.   +.  .++|++|+++|......  .  .    
T Consensus        36 ~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~---~~--~~~d~vi~~~g~~~~~~--~--~----  102 (251)
T PLN00141         36 QLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEA---IG--DDSDAVICATGFRRSFD--P--F----  102 (251)
T ss_pred             HHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHH---hh--cCCCEEEECCCCCcCCC--C--C----
Confidence            45667888766543221      1234688999999983 333222   20  36899999988643211  0  1    


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc---ccCCCchhhhhHHHHHHHHHHHHhh--hCCCccceeee
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT---AAVNVSAYFASKYGVTENHPSIKCF--SGYMLWGTTVT  152 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la~e--~~~~~~~i~v~  152 (182)
                      ..+++|..++.++++++.    +.+.++||++||...+.   +.+....|...|.+...+...+..|  +...+..+++.
T Consensus       103 ~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~ii  178 (251)
T PLN00141        103 APWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIV  178 (251)
T ss_pred             CceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence            124678888888888863    34567999999986432   2223345666665444332222222  33345678888


Q ss_pred             CCCccccc
Q psy5462         153 TPLRSVTI  160 (182)
Q Consensus       153 ~~~~~~~~  160 (182)
                      .|++..+.
T Consensus       179 rpg~~~~~  186 (251)
T PLN00141        179 RPGGLTND  186 (251)
T ss_pred             ECCCccCC
Confidence            88876544

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.41  E-value=5.7e-06  Score=64.52  Aligned_cols=114  Identities=18%  Similarity=0.164  Sum_probs=79.0

Q ss_pred             ceeEEEEccCCCHH------HHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHH
Q psy5462          25 HVAVYFKADVSDKA------EIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDM   98 (182)
Q Consensus        25 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   98 (182)
                      .++.++.+|++++.      ....+.      ..+|++||||+.....       ..++...++|+.++.++++.+..  
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~------~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~--  125 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLA------ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS--  125 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHH------hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh--
Confidence            47899999998753      332222      4589999999875321       12456678999999999988754  


Q ss_pred             HhCCCCeEEEEecccccccc----------------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462          99 LENNTGHIVCISSIAALTAA----------------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus        99 ~~~~~~~ii~iss~~~~~~~----------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                        .+..+++++||...+...                .....|+.+|.+.+.+++.++..    ..++.+..|+....
T Consensus       126 --~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----g~~~~i~Rpg~v~G  196 (367)
T TIGR01746       126 --GRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR----GLPVTIVRPGRILG  196 (367)
T ss_pred             --CCCceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhc----CCCEEEECCCceee
Confidence              334569999998755321                11347999999999998876554    45677777776554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.41  E-value=4.2e-07  Score=66.82  Aligned_cols=84  Identities=11%  Similarity=0.082  Sum_probs=63.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+........  .....||+++.+++.++++.+.+ ++++|++|||||.....++.+.+.++|+.++  
T Consensus        33 ~~la~~Ga~Vvlv~~~~~l~~--~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~--  108 (227)
T TIGR02114        33 ETFLSAGHEVTLVTTKRALKP--EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQASD--  108 (227)
T ss_pred             HHHHHCCCEEEEEcChhhccc--ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhhc--
Confidence            567788999988763211111  11246899999999999999988 9999999999998777788888999999774  


Q ss_pred             HhHHHHHHHH
Q psy5462          83 NLMSNIKMVR   92 (182)
Q Consensus        83 n~~~~~~l~~   92 (182)
                       ..+.+.+.+
T Consensus       109 -~~~~~~~~~  117 (227)
T TIGR02114       109 -NLNEFLSKQ  117 (227)
T ss_pred             -chhhhhccc
Confidence             445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.37  E-value=4.7e-06  Score=67.19  Aligned_cols=129  Identities=10%  Similarity=0.016  Sum_probs=85.2

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..++.....         ...++.++.+|+.+..     +      ..+|+|||+|+...+...    ..
T Consensus       137 ~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l------~~~D~ViHlAa~~~~~~~----~~  201 (442)
T PLN02206        137 DRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L------LEVDQIYHLACPASPVHY----KF  201 (442)
T ss_pred             HHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h------cCCCEEEEeeeecchhhh----hc
Confidence            4577788888877532211         1235677888886652     1      248999999987543221    11


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc----------------cCCCchhhhhHHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA----------------AVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      +....+++|+.++.++++++..    .+ .++|++||...+..                ......|+.+|.+.+.+++.+
T Consensus       202 ~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y  276 (442)
T PLN02206        202 NPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDY  276 (442)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHH
Confidence            2346789999999999998854    23 48999999764421                112467999999999999988


Q ss_pred             HhhhCCCccceeeeCCC
Q psy5462         139 KCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~  155 (182)
                      ..+.+   .++++..|.
T Consensus       277 ~~~~g---~~~~ilR~~  290 (442)
T PLN02206        277 HRGAN---VEVRIARIF  290 (442)
T ss_pred             HHHhC---CCeEEEEec
Confidence            76643   244444443

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.32  E-value=6.8e-06  Score=66.19  Aligned_cols=129  Identities=12%  Similarity=0.053  Sum_probs=85.2

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|++|..++.....         ...++.++..|+.+..        +   .++|+|||+|+...+....    .
T Consensus       138 ~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~--------~---~~~D~ViHlAa~~~~~~~~----~  202 (436)
T PLN02166        138 DKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI--------L---LEVDQIYHLACPASPVHYK----Y  202 (436)
T ss_pred             HHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc--------c---cCCCEEEECceeccchhhc----c
Confidence            4577788888887643211         1135677788886542        1   2489999999875432211    1


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc----------------ccCCCchhhhhHHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT----------------AAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~----------------~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      +-...+++|+.++.++++++...    + .++|++||...+.                +..+...|+.+|.+.+.+++.+
T Consensus       203 ~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y  277 (436)
T PLN02166        203 NPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDY  277 (436)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            23467889999999999988642    2 4899999876432                1112357999999999999988


Q ss_pred             HhhhCCCccceeeeCCC
Q psy5462         139 KCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~  155 (182)
                      .....   .++++..|.
T Consensus       278 ~~~~~---l~~~ilR~~  291 (436)
T PLN02166        278 HRGAG---VEVRIARIF  291 (436)
T ss_pred             HHHhC---CCeEEEEEc
Confidence            77643   345555444

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.31  E-value=7.6e-06  Score=61.02  Aligned_cols=116  Identities=18%  Similarity=0.137  Sum_probs=69.3

Q ss_pred             CceeEEEEccCCCHH------HHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHH
Q psy5462          24 THVAVYFKADVSDKA------EIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPD   97 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   97 (182)
                      ..+++++.+|++++.      ....+.+.      +|+|||||+...-..       .++...++|+.|+.++++.+.. 
T Consensus        59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~~------v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~-  124 (249)
T PF07993_consen   59 LSRIEVVEGDLSQPNLGLSDEDYQELAEE------VDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ-  124 (249)
T ss_dssp             TTTEEEEE--TTSGGGG--HHHHHHHHHH--------EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS-
T ss_pred             hccEEEEeccccccccCCChHHhhccccc------cceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh-
Confidence            679999999999853      44444444      799999998764321       2333667999999999998852 


Q ss_pred             HHhCCCCeEEEEecccc--ccc------------------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          98 MLENNTGHIVCISSIAA--LTA------------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        98 l~~~~~~~ii~iss~~~--~~~------------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                         .+..+++++||...  ...                  ......|..||..-+.+.+..+.+.+   .++.|..|+..
T Consensus       125 ---~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g---~p~~I~Rp~~i  198 (249)
T PF07993_consen  125 ---GKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHG---LPVTIYRPGII  198 (249)
T ss_dssp             ---SS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EE
T ss_pred             ---ccCcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCC---ceEEEEecCcc
Confidence               23349999999321  111                  01236999999999999998887743   37777777754


Q ss_pred             cc
Q psy5462         158 VT  159 (182)
Q Consensus       158 ~~  159 (182)
                      ..
T Consensus       199 ~g  200 (249)
T PF07993_consen  199 VG  200 (249)
T ss_dssp             E-
T ss_pred             cc
Confidence            44

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=98.25  E-value=1.1e-05  Score=61.69  Aligned_cols=109  Identities=12%  Similarity=0.084  Sum_probs=70.8

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN  102 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  102 (182)
                      .|.++.....|++|.+.+...++..    ++|+|||+|+....... +...++-...+++|+.++.++++++...    +
T Consensus        32 ~g~~V~~~~~~~~~~~~v~~~l~~~----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g  102 (298)
T PLN02778         32 QGIDFHYGSGRLENRASLEADIDAV----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCRER----G  102 (298)
T ss_pred             CCCEEEEecCccCCHHHHHHHHHhc----CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHh----C
Confidence            3444555567888888777666653    58999999997643211 1122344678899999999999998542    2


Q ss_pred             CCeEEEEeccccc--------------c----ccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462         103 TGHIVCISSIAAL--------------T----AAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus       103 ~~~ii~iss~~~~--------------~----~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                       .+.+++||...+              .    +.++...|+.+|.+.+.+++.++..
T Consensus       103 -v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~  158 (298)
T PLN02778        103 -LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV  158 (298)
T ss_pred             -CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc
Confidence             234555543211              0    1112368999999999999887643

>KOG0747|consensus

Probab=98.21  E-value=5.8e-06  Score=61.63  Aligned_cols=134  Identities=15%  Similarity=0.048  Sum_probs=93.7

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN  102 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  102 (182)
                      ...+..++..|+.+...+..++..    .++|.|||-|+......   ...+.+ ...+.|++++..|++++....   +
T Consensus        55 n~p~ykfv~~di~~~~~~~~~~~~----~~id~vihfaa~t~vd~---s~~~~~-~~~~nnil~t~~Lle~~~~sg---~  123 (331)
T KOG0747|consen   55 NSPNYKFVEGDIADADLVLYLFET----EEIDTVIHFAAQTHVDR---SFGDSF-EFTKNNILSTHVLLEAVRVSG---N  123 (331)
T ss_pred             cCCCceEeeccccchHHHHhhhcc----CchhhhhhhHhhhhhhh---hcCchH-HHhcCCchhhhhHHHHHHhcc---C
Confidence            356888999999999988888776    57999999988654321   111222 345789999999999886542   3


Q ss_pred             CCeEEEEecccccc------------ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccccccchhhHH
Q psy5462         103 TGHIVCISSIAALT------------AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTIQ  170 (182)
Q Consensus       103 ~~~ii~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~~~~~~~  170 (182)
                      -.++|++|+...+-            ..-+-..|+++|+|.+++++++.+.++-   ++.+..-.++..+.+-.....|.
T Consensus       124 i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~l---pvv~~R~nnVYGP~q~~~klipk  200 (331)
T KOG0747|consen  124 IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSYGL---PVVTTRMNNVYGPNQYPEKLIPK  200 (331)
T ss_pred             eeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhccCC---cEEEEeccCccCCCcChHHHhHH
Confidence            46899999854321            1123478999999999999999999764   55555554445555555455553

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.19  E-value=8.4e-06  Score=60.85  Aligned_cols=149  Identities=12%  Similarity=-0.014  Sum_probs=104.5

Q ss_pred             ccccccccceeccCCCC--------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           5 RTTGHIHGILFIPWCLP--------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~--------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      .|+++|+.|.-+.+...              ..+.+++++.+|++|...+.++++.+    ++|-|.|-|+.+..    .
T Consensus        21 lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----~PdEIYNLaAQS~V----~   92 (345)
T COG1089          21 LLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----QPDEIYNLAAQSHV----G   92 (345)
T ss_pred             HHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----Cchhheeccccccc----c
Confidence            46777877777653321              22346889999999999999999998    58999998887543    3


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-----------cccCCCchhhhhHHHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-----------TAAVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-----------~~~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      .+.++.....+++..|+++++.+..-.  ..+..++..-||+--+           .|..+.++|+++|..-..++..++
T Consensus        93 vSFe~P~~T~~~~~iGtlrlLEaiR~~--~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYR  170 (345)
T COG1089          93 VSFEQPEYTADVDAIGTLRLLEAIRIL--GEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR  170 (345)
T ss_pred             ccccCcceeeeechhHHHHHHHHHHHh--CCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehH
Confidence            355556677889999999999987543  2224566655553311           244567999999999999999999


Q ss_pred             hhhCC-CccceeeeCCCcccccccc
Q psy5462         140 CFSGY-MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       140 ~e~~~-~~~~i~v~~~~~~~~~~~~  163 (182)
                      ..++- .-.+|-.|+-.|...+.+-
T Consensus       171 esYgl~AcnGILFNHESP~Rge~FV  195 (345)
T COG1089         171 ESYGLFACNGILFNHESPLRGETFV  195 (345)
T ss_pred             hhcCceeecceeecCCCCCCcccee
Confidence            88773 3446666655444444443

>PLN02996 fatty acyl-CoA reductase

Probab=98.18  E-value=4.1e-05  Score=62.65  Aligned_cols=75  Identities=11%  Similarity=0.086  Sum_probs=53.6

Q ss_pred             ceeEEEEccCCC-------HHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHH
Q psy5462          25 HVAVYFKADVSD-------KAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPD   97 (182)
Q Consensus        25 ~~~~~~~~D~s~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   97 (182)
                      .++.++.+|+++       .+.+..+++      .+|+|||+|+....   .    +..+..+.+|+.|+.++++++...
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~  150 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWK------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC  150 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHh------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc
Confidence            578999999984       343444443      48999999987642   1    235668899999999999987542


Q ss_pred             HHhCCCCeEEEEeccccc
Q psy5462          98 MLENNTGHIVCISSIAAL  115 (182)
Q Consensus        98 l~~~~~~~ii~iss~~~~  115 (182)
                         .+..++|++||...+
T Consensus       151 ---~~~k~~V~vST~~vy  165 (491)
T PLN02996        151 ---VKVKMLLHVSTAYVC  165 (491)
T ss_pred             ---CCCCeEEEEeeeEEe
Confidence               123589999986643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.12  E-value=2.5e-05  Score=66.24  Aligned_cols=106  Identities=14%  Similarity=0.118  Sum_probs=73.3

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      +..+.+...|++|.+.+.++++..    ++|+|||+|+....... +...++-...+++|+.++.++++++...    + 
T Consensus       404 g~~v~~~~~~l~d~~~v~~~i~~~----~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g-  473 (668)
T PLN02260        404 GIAYEYGKGRLEDRSSLLADIRNV----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLADVCREN----G-  473 (668)
T ss_pred             CCeEEeeccccccHHHHHHHHHhh----CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHHHHHHHc----C-
Confidence            334445567899999888887764    58999999997643221 1223455678899999999999998642    2 


Q ss_pred             CeEEEEecccccc-----------c-------cCCCchhhhhHHHHHHHHHHHH
Q psy5462         104 GHIVCISSIAALT-----------A-------AVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus       104 ~~ii~iss~~~~~-----------~-------~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      .+++++||...+.           +       .+....|+.+|.+.+.+++.+.
T Consensus       474 ~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~  527 (668)
T PLN02260        474 LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD  527 (668)
T ss_pred             CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh
Confidence            3566665533211           1       1123689999999999998764

>PRK05865 hypothetical protein; Provisional

Probab=98.09  E-value=3.6e-05  Score=66.32  Aligned_cols=96  Identities=20%  Similarity=0.202  Sum_probs=69.7

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.+..+.+.... ...++.++.+|++|.+++.++++      ++|++||+|+...+             .+++
T Consensus        18 ~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~------~vD~VVHlAa~~~~-------------~~~v   78 (854)
T PRK05865         18 ARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMT------GADVVAHCAWVRGR-------------NDHI   78 (854)
T ss_pred             HHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHh------CCCEEEECCCcccc-------------hHHH
Confidence            4567789988887754322 22367889999999999887765      37999999975321             3578


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHH
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~  136 (182)
                      |+.++.++++++.    +.+.++||++||..              |.+.+.+.+
T Consensus        79 Nv~GT~nLLeAa~----~~gvkr~V~iSS~~--------------K~aaE~ll~  114 (854)
T PRK05865         79 NIDGTANVLKAMA----ETGTGRIVFTSSGH--------------QPRVEQMLA  114 (854)
T ss_pred             HHHHHHHHHHHHH----HcCCCeEEEECCcH--------------HHHHHHHHH
Confidence            9999988877764    44557999999853              776666554

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.96  E-value=3.4e-05  Score=59.56  Aligned_cols=112  Identities=10%  Similarity=0.036  Sum_probs=75.7

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+....    ...++.++.+|++|++++.++++      .+|++||+++....      +   ....
T Consensus        18 ~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~------g~d~Vi~~~~~~~~------~---~~~~   82 (317)
T CHL00194         18 RQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFK------GVTAIIDASTSRPS------D---LYNA   82 (317)
T ss_pred             HHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHC------CCCEEEECCCCCCC------C---ccch
Confidence            4577889998888754321    12368899999999998876655      47999998753211      1   1234


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHH
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~  136 (182)
                      .++|+.++.++.+++..    .+-.++|++||.....  .+...|..+|...+.+.+
T Consensus        83 ~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~  133 (317)
T CHL00194         83 KQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK  133 (317)
T ss_pred             hhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHHHHHH
Confidence            56788888888887743    3446999998854321  123567888888776654

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.94  E-value=0.00015  Score=61.35  Aligned_cols=131  Identities=14%  Similarity=0.026  Sum_probs=83.4

Q ss_pred             cccccceeccCCCCC----------CCceeEEEEccCCCHHHH--HHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           8 GHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEI--KKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         8 ~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~--~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|+.|..+.+....          ...++.++.+|++|++..  ...++.+   .++|++||+|+......    +   
T Consensus        24 ~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---~~~D~Vih~Aa~~~~~~----~---   93 (657)
T PRK07201         24 RREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---GDIDHVVHLAAIYDLTA----D---   93 (657)
T ss_pred             CCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh---cCCCEEEECceeecCCC----C---
Confidence            467888777653211          115688999999985310  1111222   35899999999753221    2   


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-------------cCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-------------AVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      .....++|+.++.++++++..    .+..++|++||...+..             ......|+.+|...+.+++.   . 
T Consensus        94 ~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~---~-  165 (657)
T PRK07201         94 EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE---E-  165 (657)
T ss_pred             HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH---c-
Confidence            234668899999999888743    34578999998765311             11235799999999988763   1 


Q ss_pred             CCCccceeeeCCCccc
Q psy5462         143 GYMLWGTTVTTPLRSV  158 (182)
Q Consensus       143 ~~~~~~i~v~~~~~~~  158 (182)
                        ...++.+..|....
T Consensus       166 --~g~~~~ilRp~~v~  179 (657)
T PRK07201        166 --CGLPWRVYRPAVVV  179 (657)
T ss_pred             --CCCcEEEEcCCeee
Confidence              23466677776543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.68  E-value=0.0006  Score=53.13  Aligned_cols=120  Identities=17%  Similarity=0.119  Sum_probs=82.9

Q ss_pred             CCCceeEEEEccCCCH------HHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHh
Q psy5462          22 TKTHVAVYFKADVSDK------AEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFL   95 (182)
Q Consensus        22 ~~~~~~~~~~~D~s~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~   95 (182)
                      ....++..+.+|++.+      .....+.+.      +|.||||++...--.    +   ..+....|+.|+..+++.+.
T Consensus        57 ~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~------vD~I~H~gA~Vn~v~----p---Ys~L~~~NVlGT~evlrLa~  123 (382)
T COG3320          57 LSADRVEVVAGDLAEPDLGLSERTWQELAEN------VDLIIHNAALVNHVF----P---YSELRGANVLGTAEVLRLAA  123 (382)
T ss_pred             hhcceEEEEecccccccCCCCHHHHHHHhhh------cceEEecchhhcccC----c---HHHhcCcchHhHHHHHHHHh
Confidence            3468999999999943      344445444      799999998764211    2   23445689999999998875


Q ss_pred             HHHHhCCCCeEEEEecccccccc--------------------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          96 PDMLENNTGHIVCISSIAALTAA--------------------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        96 ~~l~~~~~~~ii~iss~~~~~~~--------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      .    .+...+.+|||++.....                    ...+.|+-||.+.+.+++.....    +.+++|..|+
T Consensus       124 ~----gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg  195 (382)
T COG3320         124 T----GKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPG  195 (382)
T ss_pred             c----CCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecC
Confidence            3    223459999998754211                    12378999999999988866555    4589999998


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      .......
T Consensus       196 ~I~gds~  202 (382)
T COG3320         196 YITGDSR  202 (382)
T ss_pred             eeeccCc
Confidence            6544433

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.54  E-value=0.00054  Score=48.33  Aligned_cols=123  Identities=13%  Similarity=0.089  Sum_probs=78.0

Q ss_pred             cccccccccceeccCCCCCC--CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK--THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      +.|.++|+.+..+.+.....  ..+++++.+|+.|++++.+.+.      +.|.+|+++|....         +      
T Consensus        16 ~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~------~~d~vi~~~~~~~~---------~------   74 (183)
T PF13460_consen   16 KQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALK------GADAVIHAAGPPPK---------D------   74 (183)
T ss_dssp             HHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHT------TSSEEEECCHSTTT---------H------
T ss_pred             HHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhh------hcchhhhhhhhhcc---------c------
Confidence            45677888888887665422  5789999999999988877765      47999999865432         1      


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC---------CchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN---------VSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~---------~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                            ...++.++..+++.+..++|++|+...+...+.         ...|...|...+.+.+    +   ...+.++.
T Consensus        75 ------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~---~~~~~~iv  141 (183)
T PF13460_consen   75 ------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALR----E---SGLNWTIV  141 (183)
T ss_dssp             ------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHH----H---STSEEEEE
T ss_pred             ------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHH----h---cCCCEEEE
Confidence                  333444555555666679999998775443222         1245555554444432    1   23466666


Q ss_pred             CCCccccc
Q psy5462         153 TPLRSVTI  160 (182)
Q Consensus       153 ~~~~~~~~  160 (182)
                      .|.+....
T Consensus       142 rp~~~~~~  149 (183)
T PF13460_consen  142 RPGWIYGN  149 (183)
T ss_dssp             EESEEEBT
T ss_pred             ECcEeEeC
Confidence            66653333

...

>KOG1202|consensus

Probab=97.43  E-value=9.1e-05  Score=64.89  Aligned_cols=136  Identities=12%  Similarity=0.049  Sum_probs=111.3

Q ss_pred             cccccccccceeccCCC--------------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL--------------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      .||..||++-.++...-              +..|.++.+-..|++..+..+++++...+++++..|+|-|.....+.++
T Consensus      1786 qWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiE 1865 (2376)
T KOG1202|consen 1786 QWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGGIFNLAAVLRDGLIE 1865 (2376)
T ss_pred             HHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccchhhHHHHHHhhhhc
Confidence            46777888777775221              3567788888889999999999999988888999999999998888899


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +.+++.|+..-.-.+.+++++-+......-+  -.-+|..||.+.-++..+...|+.++++++.+.+.-+.+
T Consensus      1866 nQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1866 NQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            9999999999999999999988776554332  246888888776678888999999999999999865544

>KOG1430|consensus

Probab=97.38  E-value=0.0013  Score=51.35  Aligned_cols=102  Identities=12%  Similarity=0.091  Sum_probs=74.2

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      ..++.++.+|+.|..++.+.+.      +. .+||+|+...++-    -..+-+..+++|+.|+.++..++..    .+-
T Consensus        54 ~~~v~~~~~D~~~~~~i~~a~~------~~-~Vvh~aa~~~~~~----~~~~~~~~~~vNV~gT~nvi~~c~~----~~v  118 (361)
T KOG1430|consen   54 SGRVTVILGDLLDANSISNAFQ------GA-VVVHCAASPVPDF----VENDRDLAMRVNVNGTLNVIEACKE----LGV  118 (361)
T ss_pred             CCceeEEecchhhhhhhhhhcc------Cc-eEEEeccccCccc----cccchhhheeecchhHHHHHHHHHH----hCC
Confidence            5678899999998887777655      35 7777776654432    2235667889999999999998854    456


Q ss_pred             CeEEEEecccccc------------ccC--CCchhhhhHHHHHHHHHHHHh
Q psy5462         104 GHIVCISSIAALT------------AAV--NVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus       104 ~~ii~iss~~~~~------------~~~--~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .++|++||.....            |.|  ....|+.||+--+.+++..+.
T Consensus       119 ~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~  169 (361)
T KOG1430|consen  119 KRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG  169 (361)
T ss_pred             CEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC
Confidence            7999999966332            122  125999999999999887764

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.24  E-value=0.0065  Score=55.85  Aligned_cols=114  Identities=17%  Similarity=0.128  Sum_probs=75.4

Q ss_pred             ceeEEEEccCCCH------HHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHH
Q psy5462          25 HVAVYFKADVSDK------AEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDM   98 (182)
Q Consensus        25 ~~~~~~~~D~s~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   98 (182)
                      .++.++.+|++++      +....+.      ..+|++||+|+.....    .+   +......|+.++.++++.+..  
T Consensus      1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~------~~~d~iiH~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a~~-- 1098 (1389)
T TIGR03443      1034 SRIEVVLGDLSKEKFGLSDEKWSDLT------NEVDVIIHNGALVHWV----YP---YSKLRDANVIGTINVLNLCAE-- 1098 (1389)
T ss_pred             cceEEEeccCCCccCCcCHHHHHHHH------hcCCEEEECCcEecCc----cC---HHHHHHhHHHHHHHHHHHHHh--
Confidence            3688999999865      2232222      3589999999875421    12   333456799999999988743  


Q ss_pred             HhCCCCeEEEEeccccccc-----------------c-----------CCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          99 LENNTGHIVCISSIAALTA-----------------A-----------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        99 ~~~~~~~ii~iss~~~~~~-----------------~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                        .+..+++++||.+.+.+                 .           .....|+.+|.+.+.++...+..    ..++.
T Consensus      1099 --~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~----g~~~~ 1172 (1389)
T TIGR03443      1099 --GKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR----GLRGC 1172 (1389)
T ss_pred             --CCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC----CCCEE
Confidence              33458999999754311                 0           01246999999999998875442    45777


Q ss_pred             eeCCCcccc
Q psy5462         151 VTTPLRSVT  159 (182)
Q Consensus       151 v~~~~~~~~  159 (182)
                      +..|+.+..
T Consensus      1173 i~Rpg~v~G 1181 (1389)
T TIGR03443      1173 IVRPGYVTG 1181 (1389)
T ss_pred             EECCCcccc
Confidence            777775543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=97.10  E-value=0.0099  Score=49.93  Aligned_cols=74  Identities=15%  Similarity=0.142  Sum_probs=52.8

Q ss_pred             CceeEEEEccCCCHH------HHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHH
Q psy5462          24 THVAVYFKADVSDKA------EIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPD   97 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~   97 (182)
                      ..++.++.+|++++.      ..+.+.+      .+|+|||+|+....       .+.++..+++|+.++.++++.+...
T Consensus       191 ~~Ki~~v~GDl~d~~LGLs~~~~~~L~~------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~  257 (605)
T PLN02503        191 LSKLVPVVGNVCESNLGLEPDLADEIAK------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC  257 (605)
T ss_pred             cccEEEEEeeCCCcccCCCHHHHHHHHh------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence            357899999999972      3333332      48999999987542       1346678899999999999987542


Q ss_pred             HHhCCCCeEEEEeccc
Q psy5462          98 MLENNTGHIVCISSIA  113 (182)
Q Consensus        98 l~~~~~~~ii~iss~~  113 (182)
                         .+..++|++||..
T Consensus       258 ---~~lk~fV~vSTay  270 (605)
T PLN02503        258 ---KKLKLFLQVSTAY  270 (605)
T ss_pred             ---CCCCeEEEccCce
Confidence               1234788988854

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.01  E-value=0.0015  Score=48.14  Aligned_cols=79  Identities=11%  Similarity=0.128  Sum_probs=51.3

Q ss_pred             cccccccccceeccCCCCC---CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      +.|.++|+.|..+......   ...++.++.++     +...+.+.+.+ ++.+|++|||||.....+....+.++|..+
T Consensus        34 ~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~  108 (229)
T PRK06732         34 ETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIE-----NVDDLLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSAS  108 (229)
T ss_pred             HHHHhCCCEEEEEECcccccCCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhh
Confidence            4577889999888643221   12345555543     23333444444 567999999999876566666778888888


Q ss_pred             HHHHhHHH
Q psy5462          80 MDVNLMSN   87 (182)
Q Consensus        80 ~~~n~~~~   87 (182)
                      +++|....
T Consensus       109 ~~v~~~~~  116 (229)
T PRK06732        109 DNLNEFLT  116 (229)
T ss_pred             hhhhhhhc
Confidence            88865543

>PRK12320 hypothetical protein; Provisional

Probab=96.70  E-value=0.0075  Score=51.39  Aligned_cols=86  Identities=15%  Similarity=0.110  Sum_probs=59.2

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..++..... ...++.++.+|++++. +.+++      .++|++||+|+....      .      ..++
T Consensus        18 ~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al------~~~D~VIHLAa~~~~------~------~~~v   78 (699)
T PRK12320         18 RQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELA------GEADAVIHLAPVDTS------A------PGGV   78 (699)
T ss_pred             HHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHh------cCCCEEEEcCccCcc------c------hhhH
Confidence            4577889998888754322 2346889999999984 33322      358999999986321      1      1247


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIA  113 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~  113 (182)
                      |+.++.++++++..    .+ .++|++||..
T Consensus        79 Nv~Gt~nLleAA~~----~G-vRiV~~SS~~  104 (699)
T PRK12320         79 GITGLAHVANAAAR----AG-ARLLFVSQAA  104 (699)
T ss_pred             HHHHHHHHHHHHHH----cC-CeEEEEECCC
Confidence            89999999988743    33 4899999864

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=96.65  E-value=0.042  Score=41.46  Aligned_cols=83  Identities=16%  Similarity=0.105  Sum_probs=48.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      +.|.++|+.+..+.+..............|+..        ..... +.++|+|||+|+.....  .+.+.+.....+++
T Consensus        16 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~   85 (292)
T TIGR01777        16 QRLTKDGHEVTILTRSPPAGANTKWEGYKPWAP--------LAESEALEGADAVINLAGEPIAD--KRWTEERKQEIRDS   85 (292)
T ss_pred             HHHHHcCCEEEEEeCCCCCCCcccceeeecccc--------cchhhhcCCCCEEEECCCCCccc--ccCCHHHHHHHHhc
Confidence            456778888888876554322111111112221        11122 45799999999864321  12244455677789


Q ss_pred             HhHHHHHHHHHHhH
Q psy5462          83 NLMSNIKMVREFLP   96 (182)
Q Consensus        83 n~~~~~~l~~~~~~   96 (182)
                      |+.++.++++++..
T Consensus        86 n~~~~~~l~~a~~~   99 (292)
T TIGR01777        86 RIDTTRALVEAIAA   99 (292)
T ss_pred             ccHHHHHHHHHHHh
Confidence            99999998888754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.62  E-value=0.0097  Score=48.22  Aligned_cols=65  Identities=9%  Similarity=-0.036  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      .+.+.+.+..++.|..  .|+||++++..+..   ....|+++|+++.+++++++.|+ .....+.+..|.
T Consensus       100 ~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~  164 (450)
T PRK08261        100 KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVA  164 (450)
T ss_pred             HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecC
Confidence            3455677777777653  57999999976643   34579999999999999999999 433333334443

>KOG1429|consensus

Probab=96.46  E-value=0.015  Score=43.90  Aligned_cols=130  Identities=12%  Similarity=0.062  Sum_probs=87.6

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|..+||.|.+++.....         ...++..+.-|+..+     ++..      +|.|+|-|+...+..+.--+. 
T Consensus        45 dkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~e------vD~IyhLAapasp~~y~~npv-  112 (350)
T KOG1429|consen   45 DKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKE------VDQIYHLAAPASPPHYKYNPV-  112 (350)
T ss_pred             HHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHH------hhhhhhhccCCCCcccccCcc-
Confidence            6777889999999855532         234666677776554     4554      588888887766543322222 


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc----------------ccCCCchhhhhHHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT----------------AAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~----------------~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                         ..+..|+.++++++..+.+.     ..++++.|++..+-                |....+.|...|...+.|+..+
T Consensus       113 ---ktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y  184 (350)
T KOG1429|consen  113 ---KTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY  184 (350)
T ss_pred             ---ceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence               35678999999999887543     36788887755331                1123578999999999999999


Q ss_pred             HhhhCCCccceeeeCCCc
Q psy5462         139 KCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~  156 (182)
                      .++.+-   -+|+..+.+
T Consensus       185 ~k~~gi---E~rIaRifN  199 (350)
T KOG1429|consen  185 HKQEGI---EVRIARIFN  199 (350)
T ss_pred             hcccCc---EEEEEeeec
Confidence            888653   556655554

>PRK08309 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.0078  Score=42.60  Aligned_cols=57  Identities=12%  Similarity=-0.018  Sum_probs=43.6

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+++.+..+...         ....++.++.+|++|++++.++++.+.+ ++++|++|+..
T Consensus        17 ~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~v   83 (177)
T PRK08309         17 LWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWI   83 (177)
T ss_pred             HHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence            356677888777653310         1235788899999999999999999888 89999999754

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.23  E-value=0.067  Score=40.48  Aligned_cols=90  Identities=9%  Similarity=-0.063  Sum_probs=57.6

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHhcCC-ccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+.|..+.+.... ....+..+.+|+.|++++..+++....+.. +|.++++++...       .  ...    
T Consensus        17 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-------~--~~~----   83 (285)
T TIGR03649        17 RLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP-------D--LAP----   83 (285)
T ss_pred             HHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-------C--hhH----
Confidence            4567789998888765432 223566778999999999998865432444 899999876421       0  000    


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA  114 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~  114 (182)
                          ..    +.++..+++.+-.+||++||...
T Consensus        84 ----~~----~~~i~aa~~~gv~~~V~~Ss~~~  108 (285)
T TIGR03649        84 ----PM----IKFIDFARSKGVRRFVLLSASII  108 (285)
T ss_pred             ----HH----HHHHHHHHHcCCCEEEEeecccc
Confidence                11    22333344555679999998654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1431|consensus

Probab=95.60  E-value=0.072  Score=39.13  Aligned_cols=101  Identities=15%  Similarity=0.119  Sum_probs=62.3

Q ss_pred             EccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCC-CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEE
Q psy5462          31 KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASS-SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI  109 (182)
Q Consensus        31 ~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~i  109 (182)
                      .+|+++.++.+.+|+..    ++-.+||.|+..+.- .-...+.+-|..-+++|    -++++.+..    .+-.+++..
T Consensus        38 d~DLt~~a~t~~lF~~e----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e----~gv~K~vsc  105 (315)
T KOG1431|consen   38 DADLTNLADTRALFESE----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHE----HGVKKVVSC  105 (315)
T ss_pred             cccccchHHHHHHHhcc----CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHH----hchhhhhhh
Confidence            48999999999999986    688899988765431 11123455555544443    333343332    222334443


Q ss_pred             eccccc----------------cccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         110 SSIAAL----------------TAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       110 ss~~~~----------------~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .|..-+                .+.|..-.|+-+|..+.-..++++.+.+
T Consensus       106 lStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg  155 (315)
T KOG1431|consen  106 LSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG  155 (315)
T ss_pred             cceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC
Confidence            332211                1223346899999999988899999977

>PLN00016 RNA-binding protein; Provisional

Probab=95.24  E-value=0.13  Score=40.83  Aligned_cols=115  Identities=11%  Similarity=-0.027  Sum_probs=63.7

Q ss_pred             cccccccccceeccCCCCCC---------------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---------------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---------------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+.+.....               ...+.++.+|+.|   +..++..    ..+|++||+++.      
T Consensus        74 ~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~----~~~d~Vi~~~~~------  140 (378)
T PLN00016         74 KELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG----AGFDVVYDNNGK------  140 (378)
T ss_pred             HHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc----CCccEEEeCCCC------
Confidence            45777899998887543211               1247788888876   3333321    358999998653      


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC--C------CchhhhhHHHHHHHHHHHHh
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--N------VSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~--~------~~~y~~sKaa~~~~~~~la~  140 (182)
                         ..           .+...+++++    ++.+-.++|++||...+....  +      ...+. +|...+.+.+.   
T Consensus       141 ---~~-----------~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~~---  198 (378)
T PLN00016        141 ---DL-----------DEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQK---  198 (378)
T ss_pred             ---CH-----------HHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHHH---
Confidence               11           1223344443    444556899999976542211  0      01122 68777766542   


Q ss_pred             hhCCCccceeeeCCCcc
Q psy5462         141 FSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       141 e~~~~~~~i~v~~~~~~  157 (182)
                          ...+..+..|...
T Consensus       199 ----~~l~~~ilRp~~v  211 (378)
T PLN00016        199 ----LGVNWTSFRPQYI  211 (378)
T ss_pred             ----cCCCeEEEeceeE
Confidence                1335555555543

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.17  E-value=0.89  Score=38.39  Aligned_cols=134  Identities=13%  Similarity=0.025  Sum_probs=88.1

Q ss_pred             ccccccccceeccCCCC---------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cC--------------Ccc
Q psy5462           5 RTTGHIHGILFIPWCLP---------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IG--------------YVD   54 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~---------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--------------~id   54 (182)
                      +|+.-|+.|......+.               ..+...-++..++++..+++.+++.|-+ -.              .++
T Consensus       416 ~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~pt  495 (866)
T COG4982         416 RLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPT  495 (866)
T ss_pred             HHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcc
Confidence            56666777777654332               3456777889999999999999998865 21              256


Q ss_pred             EEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccc-cCCCchhhhhHHH
Q psy5462          55 ILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTA-AVNVSAYFASKYG  130 (182)
Q Consensus        55 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~-~~~~~~y~~sKaa  130 (182)
                      .+|--|+....+.+.+...+ -+..+++-+++...++-.+.+.-..++   +-++|.-+|..  .+ +-+.++|+-+|++
T Consensus       496 ll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPN--rG~FGgDGaYgEsK~a  572 (866)
T COG4982         496 LLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPN--RGMFGGDGAYGESKLA  572 (866)
T ss_pred             eeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCC--CCccCCCcchhhHHHH
Confidence            77776666555666555442 344567777887777777665433322   23555555533  21 2346899999999


Q ss_pred             HHHHHHHHHhh
Q psy5462         131 VTENHPSIKCF  141 (182)
Q Consensus       131 ~~~~~~~la~e  141 (182)
                      ++.+.--|..|
T Consensus       573 ldav~~RW~sE  583 (866)
T COG4982         573 LDAVVNRWHSE  583 (866)
T ss_pred             HHHHHHHhhcc
Confidence            99988766555

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=95.04  E-value=0.049  Score=43.59  Aligned_cols=61  Identities=15%  Similarity=0.075  Sum_probs=41.7

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      +.+.++|+.|..+........ ......+|+++.+++.+.++..  ++++|++|+|||.....+
T Consensus       222 ~~l~~~Ga~V~~v~~~~~~~~-~~~~~~~dv~~~~~~~~~v~~~--~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        222 RAAARRGADVTLVSGPVNLPT-PAGVKRIDVESAQEMLDAVLAA--LPQADIFIMAAAVADYRP  282 (399)
T ss_pred             HHHHHCCCEEEEeCCCccccC-CCCcEEEccCCHHHHHHHHHHh--cCCCCEEEEccccccccc
Confidence            467788999988875432111 1124568999988877665522  788999999999865443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=94.40  E-value=0.49  Score=46.46  Aligned_cols=115  Identities=12%  Similarity=0.041  Sum_probs=70.6

Q ss_pred             EEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE
Q psy5462          29 YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV  107 (182)
Q Consensus        29 ~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii  107 (182)
                      .+.+.--|..++..+++.+.. .++++.+||..+...... ...+...+...-...+...|.+.|.+.+.+...+++.++
T Consensus      1804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~ 1882 (2582)
T TIGR02813      1804 SVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSVA-DKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFV 1882 (2582)
T ss_pred             cccccccchHHHHHHHHhhhccccccceEEEecccccccc-ccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEE
Confidence            445555667788888888777 788999999776543210 000000011111133445677777776666555667899


Q ss_pred             EEeccccccccCCCch--------hhhhHHHHHHHHHHHHhhhCC
Q psy5462         108 CISSIAALTAAVNVSA--------YFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       108 ~iss~~~~~~~~~~~~--------y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .++...|-.+......        -....+++.+|+|+++.|+..
T Consensus      1883 ~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~ 1927 (2582)
T TIGR02813      1883 TVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNA 1927 (2582)
T ss_pred             EEEecCCccccCCccccccccccccchhhhhHHHHHHhHHHHCCC
Confidence            8888765544322111        123578999999999999873

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG2865|consensus

Probab=93.66  E-value=0.61  Score=35.68  Aligned_cols=73  Identities=19%  Similarity=0.283  Sum_probs=51.7

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTG  104 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  104 (182)
                      +++.++..|+.|+++++++++..      +++||-.|.-.+..  .++-+      ++|+.++-.+.+.+    ++.+--
T Consensus       109 GQvl~~~fd~~DedSIr~vvk~s------NVVINLIGrd~eTk--nf~f~------Dvn~~~aerlAric----ke~GVe  170 (391)
T KOG2865|consen  109 GQVLFMKFDLRDEDSIRAVVKHS------NVVINLIGRDYETK--NFSFE------DVNVHIAERLARIC----KEAGVE  170 (391)
T ss_pred             cceeeeccCCCCHHHHHHHHHhC------cEEEEeeccccccC--Ccccc------cccchHHHHHHHHH----HhhChh
Confidence            68999999999999999999874      89999988755422  11222      35666666666655    444456


Q ss_pred             eEEEEeccccc
Q psy5462         105 HIVCISSIAAL  115 (182)
Q Consensus       105 ~ii~iss~~~~  115 (182)
                      ++|.+|+..+.
T Consensus       171 rfIhvS~Lgan  181 (391)
T KOG2865|consen  171 RFIHVSCLGAN  181 (391)
T ss_pred             heeehhhcccc
Confidence            88888876543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=93.33  E-value=2.1  Score=30.59  Aligned_cols=125  Identities=14%  Similarity=0.118  Sum_probs=76.5

Q ss_pred             cccccccceeccCCCCCCC--ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           6 TTGHIHGILFIPWCLPTKT--HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         6 l~~~g~~v~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ...|||.|..+.+......  ..+...+.|+.|++++.+.+.      +.|++|..-+...++.      +..       
T Consensus        20 A~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~------g~DaVIsA~~~~~~~~------~~~-------   80 (211)
T COG2910          20 ALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLA------GHDAVISAFGAGASDN------DEL-------   80 (211)
T ss_pred             HHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhc------CCceEEEeccCCCCCh------hHH-------
Confidence            4678999999876554332  567789999999998855443      4899998766653322      110       


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                         .....++++..++..+..|++.+++..++.-.         .....|-..-.+..-+.+.|+.+-.   ..-+..+|
T Consensus        81 ---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~---l~WTfvSP  154 (211)
T COG2910          81 ---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKS---LDWTFVSP  154 (211)
T ss_pred             ---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccC---cceEEeCc
Confidence               01114555555555567899999876654321         1224555555555566677777733   35555555


Q ss_pred             C
Q psy5462         155 L  155 (182)
Q Consensus       155 ~  155 (182)
                      -
T Consensus       155 a  155 (211)
T COG2910         155 A  155 (211)
T ss_pred             H
Confidence            4

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=93.24  E-value=0.38  Score=36.44  Aligned_cols=123  Identities=10%  Similarity=-0.011  Sum_probs=63.8

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHh
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL   84 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   84 (182)
                      +|.+.||.+.++.+..+....+.....-..   +.+....+     .++|++||-||..-...  ..+.+.=+..++.-+
T Consensus        17 ~L~~~gh~v~iltR~~~~~~~~~~~~v~~~---~~~~~~~~-----~~~DavINLAG~~I~~r--rWt~~~K~~i~~SRi   86 (297)
T COG1090          17 RLRKGGHQVTILTRRPPKASQNLHPNVTLW---EGLADALT-----LGIDAVINLAGEPIAER--RWTEKQKEEIRQSRI   86 (297)
T ss_pred             HHHhCCCeEEEEEcCCcchhhhcCcccccc---chhhhccc-----CCCCEEEECCCCccccc--cCCHHHHHHHHHHHh
Confidence            566778999999887776665554332211   11111111     25999999999754332  124444444544444


Q ss_pred             HHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          85 MSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      ..+    +.+...+.+.. +.++..-+|..|+++......|.-....-+.|.-.++++
T Consensus        87 ~~T----~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~  140 (297)
T COG1090          87 NTT----EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQD  140 (297)
T ss_pred             HHH----HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHH
Confidence            444    44444444333 344444456667877655444433333333444444333

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=92.69  E-value=0.21  Score=39.88  Aligned_cols=89  Identities=13%  Similarity=0.085  Sum_probs=52.1

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHH-HHHHHHHHhcCCccEEEEcccCCCCCCcccC--CHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~-~~~~~~~~~~~~id~li~~ag~~~~~~~~~~--~~~~~~~~~   80 (182)
                      +.+.++|+.|..+.......... ....+|+++.+++ +.+++..  ++.+|++|+|||.....+....  ..+.-...+
T Consensus       219 ~~~~~~Ga~V~~~~g~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~--~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~  295 (390)
T TIGR00521       219 EAAYKRGADVTLITGPVSLLTPP-GVKSIKVSTAEEMLEAALNEL--AKDFDIFISAAAVADFKPKTVFEGKIKKQGEEL  295 (390)
T ss_pred             HHHHHCCCEEEEeCCCCccCCCC-CcEEEEeccHHHHHHHHHHhh--cccCCEEEEccccccccccccccccccccCCce
Confidence            45778899988876443222111 2356899999888 5565443  4679999999998765443221  111111233


Q ss_pred             HHHhHHHHHHHHHHh
Q psy5462          81 DVNLMSNIKMVREFL   95 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~   95 (182)
                      .+++...--++..+.
T Consensus       296 ~l~L~~~pdil~~l~  310 (390)
T TIGR00521       296 SLKLVKNPDIIAEVR  310 (390)
T ss_pred             eEEEEeCcHHHHHHH
Confidence            455555555555543

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG2774|consensus

Probab=91.60  E-value=0.16  Score=37.54  Aligned_cols=102  Identities=15%  Similarity=0.169  Sum_probs=68.2

Q ss_pred             EEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE
Q psy5462          28 VYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV  107 (182)
Q Consensus        28 ~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii  107 (182)
                      -++-.|+.|...+++++-.    .+||-+||-.+....     +..+...-..++|+.|..++++.+..+     +-++.
T Consensus        90 PyIy~DILD~K~L~eIVVn----~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iF  155 (366)
T KOG2774|consen   90 PYIYLDILDQKSLEEIVVN----KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKH-----KLKVF  155 (366)
T ss_pred             CchhhhhhccccHHHhhcc----cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHc-----CeeEe
Confidence            3677888888888776544    579999997654322     111222335689999999999887654     34454


Q ss_pred             EEeccccccc------cC------CCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         108 CISSIAALTA------AV------NVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       108 ~iss~~~~~~------~~------~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .-|.+.++-|      .|      +...||.||--.+-+-+.+.-.++
T Consensus       156 VPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg  203 (366)
T KOG2774|consen  156 VPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFG  203 (366)
T ss_pred             ecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhcC
Confidence            4455555433      22      347999999988888887776665

>KOG1221|consensus

Probab=91.43  E-value=0.97  Score=36.92  Aligned_cols=75  Identities=17%  Similarity=0.248  Sum_probs=52.4

Q ss_pred             CCceeEEEEccCCCHH------HHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhH
Q psy5462          23 KTHVAVYFKADVSDKA------EIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLP   96 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~   96 (182)
                      .-.++..+.+|+++++      ++..+.      ..+|++||+|+...-       .+.++..+.+|..|+.++.+.+..
T Consensus        77 ~l~Kv~pi~GDi~~~~LGis~~D~~~l~------~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~  143 (467)
T KOG1221|consen   77 ALEKVVPIAGDISEPDLGISESDLRTLA------DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKE  143 (467)
T ss_pred             ceecceeccccccCcccCCChHHHHHHH------hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHH
Confidence            3468888999998754      333233      358999999987532       344677889999999999988765


Q ss_pred             HHHhCCCCeEEEEeccc
Q psy5462          97 DMLENNTGHIVCISSIA  113 (182)
Q Consensus        97 ~l~~~~~~~ii~iss~~  113 (182)
                      .. +  -..++.+|+.-
T Consensus       144 ~~-~--l~~~vhVSTAy  157 (467)
T KOG1221|consen  144 MV-K--LKALVHVSTAY  157 (467)
T ss_pred             hh-h--hheEEEeehhh
Confidence            32 2  24677777643

>PLN00106 malate dehydrogenase

Probab=85.94  E-value=5.7  Score=31.03  Aligned_cols=85  Identities=12%  Similarity=0.102  Sum_probs=55.0

Q ss_pred             cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEec-ccc----c--------c
Q psy5462          50 IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISS-IAA----L--------T  116 (182)
Q Consensus        50 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss-~~~----~--------~  116 (182)
                      +...|++|+.||.....      ...+...+..|+.....+.+.+.+    .+...+++++| ..-    .        .
T Consensus        84 l~~aDiVVitAG~~~~~------g~~R~dll~~N~~i~~~i~~~i~~----~~p~aivivvSNPvD~~~~i~t~~~~~~s  153 (323)
T PLN00106         84 LKGADLVIIPAGVPRKP------GMTRDDLFNINAGIVKTLCEAVAK----HCPNALVNIISNPVNSTVPIAAEVLKKAG  153 (323)
T ss_pred             cCCCCEEEEeCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEeCCCccccHHHHHHHHHHcC
Confidence            35689999999985431      123566778888877777666644    34444555544 221    1        2


Q ss_pred             ccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         117 AAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       117 ~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      +.|+.-.||.++.-...|-..++.+++-
T Consensus       154 ~~p~~~viG~~~LDs~Rl~~~lA~~lgv  181 (323)
T PLN00106        154 VYDPKKLFGVTTLDVVRANTFVAEKKGL  181 (323)
T ss_pred             CCCcceEEEEecchHHHHHHHHHHHhCC
Confidence            3556678899886666788888888774

>PRK09620 hypothetical protein; Provisional

Probab=82.54  E-value=1.4  Score=32.49  Aligned_cols=58  Identities=12%  Similarity=0.084  Sum_probs=31.3

Q ss_pred             cccccccccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.|..+.......      +..+..+..|....+.+.++++.    .++|++||+|+..-.
T Consensus        37 ~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~----~~~D~VIH~AAvsD~  100 (229)
T PRK09620         37 EELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITH----EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcc----cCCCEEEECccccce
Confidence            56788999998877533211      12233333322112223332221    358999999998654

>KOG1372|consensus

Probab=80.16  E-value=1.9  Score=32.40  Aligned_cols=129  Identities=12%  Similarity=-0.045  Sum_probs=78.9

Q ss_pred             ccccccccceeccCCCC----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           5 RTTGHIHGILFIPWCLP----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      .|+++|+.|.-+.+...                -.++.....-+|++|...+.+++..+    +++-+.|.|+.....- 
T Consensus        47 fLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i----kPtEiYnLaAQSHVkv-  121 (376)
T KOG1372|consen   47 FLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI----KPTEVYNLAAQSHVKV-  121 (376)
T ss_pred             HHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc----CchhhhhhhhhcceEE-
Confidence            45666766665542221                23467888899999999999999988    4677777777654321 


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc------------ccCCCchhhhhHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT------------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~  136 (182)
                         +-+--+..-++...|++.++.+....-... +-++-- .|.+..+            |.-+.++|+++|...--++-
T Consensus       122 ---SFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQ-AstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~Wivv  196 (376)
T KOG1372|consen  122 ---SFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQ-ASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVV  196 (376)
T ss_pred             ---EeecccceeeccchhhhhHHHHHHhcCccc-ceeEEe-cccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEE
Confidence               112222334577888998888765432221 223333 3323222            33456899999987766666


Q ss_pred             HHHhhhC
Q psy5462         137 SIKCFSG  143 (182)
Q Consensus       137 ~la~e~~  143 (182)
                      .++..+.
T Consensus       197 NyREAYn  203 (376)
T KOG1372|consen  197 NYREAYN  203 (376)
T ss_pred             EhHHhhc
Confidence            6666544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	182
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		6e-14
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		5e-11
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-11
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-11
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		9e-11
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		9e-11
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		9e-11
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		3e-10
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		3e-10
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		3e-10
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-10
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-09
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-09
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-09
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-09
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-09
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-09
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-09
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-09
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		5e-09
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		5e-09
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		5e-09
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		6e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		6e-09
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		9e-09
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-08
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-08
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		1e-08
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-08
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		1e-08
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-08
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-08
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-08
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-08
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		4e-08
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		4e-08
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		6e-08
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		8e-08
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		9e-08
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-07
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-07
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-07
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-07
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		3e-07
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		3e-07
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		3e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-07
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		4e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-07
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-07
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		4e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		5e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		6e-07
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		8e-07
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		9e-07
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		9e-07
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-06
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-06
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		1e-06
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-06
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-06
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-06
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-06
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-06
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-06
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		2e-06
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-06
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		2e-06
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-06
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		3e-06
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		3e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-06
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		4e-06
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		4e-06
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-06
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		5e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		5e-06
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		5e-06
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		5e-06
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		5e-06
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		5e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-06
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		6e-06
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		6e-06
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-06
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		7e-06
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		7e-06
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-05
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-05
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-05
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		1e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		1e-05
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-05
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		1e-05
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-05
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		2e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-05
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-05
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-05
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-05
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-05
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-05
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-05
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-05
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		3e-05
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-05
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-05
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		5e-05
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-05
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-05
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		7e-05
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		8e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-05
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		1e-04
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-04
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-04
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-04
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-04
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		2e-04
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-04
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		3e-04
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-04
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		4e-04
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		4e-04
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		4e-04
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		4e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		5e-04
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		6e-04
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-04
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-04
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		7e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		7e-04
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		8e-04

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 30  FKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F  D S++ +I    + V+ +IG V IL+NNAG+V +S + A  D +IE+  +VN++++ 
Sbjct: 85  FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 144
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
              + FLP M +NN GHIV ++S A   +   + AY +SK+     H ++
Sbjct: 145 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTL 194

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV D A +++L  + + + G +D+++ NAG+++   V   TD + + ++ VNL    + +
Sbjct: 85  DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTL 144
Query: 92  REFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           R  +P M+E  N G IV +SS A L A      Y ASK+G+T
Sbjct: 145 RATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLT 186

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV+  AD+SD A+I+ L     R+ G VDIL+NNAGI   + V        ++I+ +NL 
Sbjct: 53  AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +     R  LP M   N G I+ I+S+  L  +   +AY A+K+GV
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F A++SD+  +K L +   + +G VDIL+NNAGI      +  +D + + ++ VNL S  
Sbjct: 61  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 120
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + RE    M+    G I+ I+SI  +T     + Y ASK G+
Sbjct: 121 NLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGL 163

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F A++SD+  +K L +   + +G VDIL+NNAGI      +  +D + + ++ VNL S  
Sbjct: 58  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVF 117
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + RE    M+    G I+ I+SI  +T     + Y ASK G+
Sbjct: 118 NLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGL 160

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 31  KADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           +ADV D A ++ + +E + + G++DIL++N GI     V++ TD +   I+  NL+    
Sbjct: 113 QADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWH 172
Query: 90  MVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             R  LP M+E    G ++ +SS   L  A   S Y ASK+GV
Sbjct: 173 ACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 40  IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER-IMDVNLMSNIKMVREFLPDM 98
           ++  +E  R +G VD++ +NAGIV +   LA  +H+  R ++D++L  +I  V  FLP +
Sbjct: 96  VRLADEAFRLLGGVDVVFSNAGIVVAGP-LAQMNHDDWRWVIDIDLWGSIHAVEAFLPRL 154
Query: 99  LENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           LE  T GHI   +S A L     +  Y  +KYGV
Sbjct: 155 LEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV 188

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 28  VYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           +Y  AD+S    ++ L +N VR++G +DIL+NNAGI  ++ +      + + I+ +NL +
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                   LP M +   G I+ I+S   L A+ N SAY A+K+GV
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 28  VYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           +Y  AD+S    ++ L +N VR++G +DIL+NNAGI  ++ +      + + I+ +NL +
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                   LP M +   G I+ I+S   L A+ N SAY A+K+GV
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 28  VYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           +Y  AD+S    ++ L +N VR++G +DIL+NNAGI  ++ +      + + I+ +NL +
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSA 117
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                   LP M +   G I+ I+S   L A+ N SAY A+K+GV
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 32  ADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           AD+SD A++++L  + V + G++D L+NNAG+    ++   T+ + +  M+ NL     +
Sbjct: 65  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 124
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
            +     M   ++GHI  I+S+AA  A  + S Y  SK+G
Sbjct: 125 TQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFG 164

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 31  KADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSV-LAHTD--HEIERIMDVNLMS 86
           +ADV+D+ ++   +   + + G +D+L+NNAGI  +S   + HT    + +++M VN+  
Sbjct: 58  RADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRG 117
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
                R  LP ML    G IV I+S+A+L A    SAY  SK  V +   S+
Sbjct: 118 IFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSV 169

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F A++SD+  IK+L E   R++  +DIL+NNAGI      +   D + + ++ VNL +  
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAAS 137
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + RE +  M+    G I+ I+SI  +      + Y A+K G+
Sbjct: 138 TLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGL 180

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            +A+V+D  E+K +  E V + G +D+L+NNAGI   + ++   + E + ++D NL    
Sbjct: 65  IQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVF 124
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +++  P ML   +G I+ +SS+         + Y A+K GV
Sbjct: 125 NCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV 167

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 30  FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
            + DV D   +    E V + G VD+L+ NAG+     + A  +  +  +++VN++  ++
Sbjct: 62  LQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVR 120
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 27  AVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + DVSD+ +I   ++  V   G VD L+ NAG+V  +S++  T  + +R++ +NL 
Sbjct: 77  AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLR 136
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
                 +   P M+E   G IV +SS+A   A     AY  SK G+ +
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQ 184

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 15/139 (10%)
Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D+  I+ +   +  ++G +DIL+NNAGI+    ++  T  +  +++D++L +   + 
Sbjct: 91  DVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVS 150
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG---VTEN------HPSIKC-- 140
           +  +P M++   G I+ I S+ +      VSAY A+K G   +T+N        +I+C  
Sbjct: 151 KAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNG 210
Query: 141 -FSGYMLWGTTVTTPLRSV 158
              GY+   T  T PLR +
Sbjct: 211 IGPGYI--ATPQTAPLREL 227

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 23  KTHVAVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD 81
           K HV    + DV+D+  +   +   V  +G +DIL+NNAGI+    V      +  R++D
Sbjct: 57  KVHV---LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMID 113
Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            NL+  + M R  LP +L +  G +V +SSIA      N + Y A+K+GV
Sbjct: 114 TNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGV 162

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 33  DVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D+  +    +  V   G +D+L+NNAG++  S + A    E ER++DVN+   +  +
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              LP M    +G I+ I SI AL+     + Y A+K+ V
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV 160

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 29  YFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           +F+ D+ D+ E ++ + E    +G VD+L+NNA I A  S L     E  R+++VNL + 
Sbjct: 53  FFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAP 112
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +      +M +   G IV ++S+  L A    +AY ASK G+
Sbjct: 113 MHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 156

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           V+  ADV+ + +++  L     K G VD+ +N AGI  +S          HT  + +R++
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           DVNLM    ++R    +M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           V+  ADV+ + +++  L     K G VD+ +N AGI  +S          HT  + +R++
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           DVNLM    ++R    +M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 175

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           V+  ADV+ + +++  L     K G VD+ +N AGI  +S          HT  + +R++
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           DVNLM    ++R    +M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 175

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           +  DVS K EI + +N+ + +   VDIL+NNAGI   +  L   + E E ++  NL S  
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + +     M+ N  G I+ ISSI  LT  V  + Y +SK GV
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 200

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y  AD+SD    +  + +    +G +DIL+NNAGI  ++ +      +   I+ +NL 
Sbjct: 57  AYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLS 116
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +        LP M +   G I+ I+S   L A+VN SAY A+K+GV
Sbjct: 117 AVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGV 162

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 29  YFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           Y   DV+  A+ K  ++  V   G + +L+NNAGI+   ++  +   E +RI+DVNL   
Sbjct: 57  YVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGV 116
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +R  +  M E   G I+ ISSI  L   V    Y A+K+ V
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV 160

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 14/144 (9%)
Query: 22  TKTHVAVYFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERI 79
           +  +V+ +FK DV+++ E+K+  E   +K G +DIL+NNAGI    S L  T  EI  RI
Sbjct: 50  SDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGI-EQYSPLHLTPTEIWRRI 108
Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTEN-- 134
           +DVN+  +  M +  +P ML    G I+ I+S+ +  A  N +AY  SK+   G+T +  
Sbjct: 109 IDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVA 168
Query: 135 ---HPSIKCFSGYMLWGTTVTTPL 155
               P I+C +   +   T+ TP+
Sbjct: 169 IDYAPKIRCNA---VCPGTIMTPM 189

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           AD++D      + E +     VD+L+NNAGI+A +     +      ++ VNL +   + 
Sbjct: 86  ADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLS 145
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R F   ML + +G IV I+S+ +     NV+AY ASK+ V
Sbjct: 146 RSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAV 185

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           ++++K E   L   + K   +DIL+ NAGI + +  +   D + ++++D+NL +N  + R
Sbjct: 68  NLANKEECSNL---ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNR 124
Query: 93  EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           E +  M++   G I+ ISSI  +      + Y ASK G+
Sbjct: 125 EAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGL 163

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 31  KADVSDKAEIKKLNENVRKI----GYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNLM 85
           KADVS K   K + E VR+       +D+L NNAGI+   + +A    E+ ER++ VNL 
Sbjct: 62  KADVSKK---KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLY 118
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S     R  +P ML+   G IV  +SIA +      + Y  +K+G+
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGL 164

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 30  FKA---DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           FKA   DV+D    ++  E V    G VD+LINNAGI   ++ +  T  + + +M  +L 
Sbjct: 77  FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLD 136
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   + ++F+  M+E   G IV I S+     A   + Y ++K G+
Sbjct: 137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI 182

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 30  FKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
            +A+V+D  E+K  + E V + G +D+L+NNAGI   + +    + E + ++D NL    
Sbjct: 59  IQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVF 118
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +++  P  L   +G I+ +SS+         + Y A+K GV
Sbjct: 119 NCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV 161

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D   I  +  +V  + G VD+L+NNAG     +    T+ E+  + ++++    ++ 
Sbjct: 59  DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLT 118
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           R  LP   E  +G +V ISS     +    SAY A+K
Sbjct: 119 RALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATK 155

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 30  FKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           F+ DVS+  E+KKL E V+ K G +D ++N AGI            E  ++++VNL    
Sbjct: 76  FRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 135
Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVT 132
            + RE    + E++   I+ I S+      + N+SAY ASK GV 
Sbjct: 136 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA 180

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 29  YFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           Y   DV+  A+ K  ++  V   G + +L+NNAGI+   ++  +   E +RI+DVNL   
Sbjct: 57  YVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGV 116
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +R  +    E   G I+ ISSI  L   V    Y A+K+ V
Sbjct: 117 FLGIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAV 160

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 23  KTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAG-IVASSSVLAHTDHEIERIM 80
           K HVA   + D++   +IK   EN+ ++   +DIL+NNAG  + S  V      +I+ + 
Sbjct: 88  KVHVA---QLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVF 144
Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           D N+ + I + +  LP     N+G IV + SIA   A    S Y ASK+ V
Sbjct: 145 DTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAV 195

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           +V+D A I+ + E +R + G VDIL+NNAGI   + ++   D E   I++ NL S  ++ 
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  +  M++   G I+ I S+         + Y A+K G+
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGL 158

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Query: 28  VYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           ++  AD +  +EI      V  + G  DIL+NNAG+     +      + +RI+ VNL S
Sbjct: 79  LHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSS 138
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   +R  +P   +   G I+ I+S   L A+   SAY A+K+G+
Sbjct: 139 SFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGI 183

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 51  GYVDILINNAGIVASSSVLAHT--DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           G  D+L+NNAG+      L HT    E + ++ VNL +   ++R F P M+    GHI+ 
Sbjct: 105 GRCDVLVNNAGVGWFGGPL-HTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIIN 163
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           ISS+A      + +AY ASK+G+
Sbjct: 164 ISSLAGKNPVADGAAYTASKWGL 186

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG +   +     D     +++ NL    ++ 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 184

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG +   +     D     +++ NL    ++ 
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVT 138
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 29  YFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           + + DV++  ++K  ++   ++ G + +L+NNAGI +   + + +  E  RI+DVNL   
Sbjct: 50  HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGY 109
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTEN-----HPSIK 139
               +  +P M+ +    IV ISS+ A     N SAY  SK+   G+T++      P ++
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLR 169
Query: 140 CFSGYMLWGTTVTTPL 155
           C +   +   T+ TPL
Sbjct: 170 CNA---VCPATIDTPL 182

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 29  YFKADVSDKAEIK-KLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           + + DV++  ++K  ++   ++ G + +L+NNAGI +   + + +  E  RI+DVNL   
Sbjct: 57  HIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGY 116
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTEN-----HPSIK 139
               +  +P M+ +    IV ISS+ A     N SAY  SK+   G+T++      P ++
Sbjct: 117 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLR 176
Query: 140 CFSGYMLWGTTVTTPL 155
           C +   +   T+ TPL
Sbjct: 177 CNA---VCPATIDTPL 189

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 21  PTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERI 79
           P +  +AV  K D++D  ++++  + + +  G V++LI NAG+     ++  ++ +   +
Sbjct: 57  PPEGFLAV--KCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSV 114
Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ NL    ++V+     ML    G +V ISS+  L  +   + Y ASK G+
Sbjct: 115 VETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGL 166

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 23  KTHVAVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD 81
           K HV    + DV+D+  +   +   V  +G +DIL+NNAGI     V      +  R +D
Sbjct: 57  KVHV---LELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVEDADTTDWTRXID 113
Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            NL+      R  LP +L +  G +V  SSIA      N + Y A+K+GV
Sbjct: 114 TNLLGLXYXTRAALPHLLRSK-GTVVQXSSIAGRVNVRNAAVYQATKFGV 162

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 184

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           +V+D A I+ + E +R + G VDIL+NNAGI   + ++   D E   I++ NL S  ++ 
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  +  M++   G I+ I S+         + + A+K G+
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGL 158

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLM 85
           V  + DV D   +K  ++  V ++G +DI++ NAGI      L  T  E    ++D+NL 
Sbjct: 79  VTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLA 138
Query: 86  SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGV 131
              K V+  +P M+     G I+  SS+  L A  +   Y A+K+GV
Sbjct: 139 GVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 184

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 184

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 138
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           DV+ K +I +    V ++   D+L N AG V   +VL   + + +  M++N+ S   M++
Sbjct: 58  DVTKKKQIDQFANEVERL---DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK 114
Query: 93  EFLPDMLENNTGHIVCISSIA-ALTAAVNVSAYFASKYGV 131
            FLP ML   +G+I+ +SS+A ++   VN   Y  +K  V
Sbjct: 115 AFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 32  ADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSS-VLAHTDHEIERIMDVNLMSNIK 89
           ADVSD+A+++  +     + G +D   NNAGI    +   + T  E ++++ +NL     
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + + L  M E  +G +V  +S+  +    N S Y A+K+GV
Sbjct: 131 GLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 172

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 63  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 122
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 123 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 164

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL    ++ 
Sbjct: 83  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 92  REFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGV 184

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 31  KADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           + +V D    K+  + V+ ++G +D+L+NNAGI         T  + + ++D NL S   
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFN 128
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + ++ +  M+E   G I+ ISS+         + Y  +K G+
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 170

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 16/138 (11%)
Query: 28  VYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA----HTDHEIERIMDVN 83
           +Y + DV+ + ++++     ++   +  +++ AG+  +  +L     H      R+++VN
Sbjct: 42  IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVN 101
Query: 84  LMSNIKMVR-------EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE-NH 135
           L+    ++R       E  PD  E   G IV  +S+AA    +  +AY ASK GV     
Sbjct: 102 LLGTFNVLRLAAWAMRENPPDA-EGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTL 160
Query: 136 PSIKCFSGYMLWGTTVTT 153
           P+ +  +G   WG  V T
Sbjct: 161 PAARELAG---WGIRVVT 175

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 54  DILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDML-ENNTGHIVCISSI 112
           DIL+NNAGI+  +  +  ++ + + +MDVNL +     + F  ++L +  +G +V I+S+
Sbjct: 81  DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL 140
Query: 113 AALTAAVNVSAYFASKYGVT 132
            +    + V +Y A+K+GV 
Sbjct: 141 LSFQGGIRVPSYTAAKHGVA 160

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNAGI   + ++   + E   IM+ NL S  ++ +  L  M++   G I+ 
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 142
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + Y A+K GV
Sbjct: 143 VGSVVGTMGNAGQANYAAAKAGV 165

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNAGI   + ++   + E   IM+ NL S  ++ +  L  M++   G I+ 
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 142
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + Y A+K GV
Sbjct: 143 VGSVVGTMGNAGQANYAAAKAGV 165

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A     D+S+      L E    I  VDIL+ NA    ++++ A T +++   + VNL S
Sbjct: 84  AQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGS 143
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
            + M++  LP M+    G +V I SI  L     V+AY A+K
Sbjct: 144 TVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATK 185

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 48  RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV 107
            + G VD L+NNAGI     +   +     +++++NL      ++  +P M +   G IV
Sbjct: 75  EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134
Query: 108 CISSIAALTAAVNVSAYFASKYGV 131
            ISS A L      S+Y ASK+GV
Sbjct: 135 NISSAAGLMGLALTSSYGASKWGV 158

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 33  DVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           +V+D   +  L E+ +++ G +++L+NNAGI      +   D E + ++D NL +  ++ 
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLS 144
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  L  M++   G IV I+S+           Y A+K GV
Sbjct: 145 RAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 48  RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV 107
            + G VD L+NNAGI     +   +     +++++NL      ++  +P M +   G IV
Sbjct: 75  EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIV 134
Query: 108 CISSIAALTAAVNVSAYFASKYGV 131
            ISS A L      S+Y ASK+GV
Sbjct: 135 NISSAAGLMGLALTSSYGASKWGV 158

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 31  KADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           KADVS ++E++ L   V  + G +D+L+NNAGI   + +L     + + ++D+NL     
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             R     ML+  +G I+ I+S+         + Y A+K GV
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGV 185

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 31  KADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           K DV D+A ++  + E    +G +DI I NAGI   + +      + + ++  NL     
Sbjct: 77  KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFN 136
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +    P M++ N G IV +SS+   +A    ++Y +SK+GV
Sbjct: 137 TIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGV 178

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 27  AVYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV F  DV+ ++EI +    + + G  VDIL+NNAGI     ++     + +R++D NL 
Sbjct: 79  AVAF--DVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLT 136
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + RE    M+    G IV I S+ +  A   V+ Y  +K G+
Sbjct: 137 SAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGI 182

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 47  VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHI 106
           + K   VDILINN GI          D +  ++ +VN+ S +++ R +L   +E   G +
Sbjct: 80  IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEGRV 139
Query: 107 VCISSIAALTAAVNVSAYFASK 128
           + I+S AA+  +   + Y A+K
Sbjct: 140 IFIASEAAIXPSQEXAHYSATK 161

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 28  VYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           V  K DV +  +++ + +  +   G +DIL+NNAGI   + +L  ++ + + +++ NL S
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKS 117
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +     ML+  +G I+ I+SIA +      + Y ASK G+
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL 162

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 33  DVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           D+  + E  KL + V  +  G ++IL+NNAG+V        T+ +   IM  N  +   +
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC 140
            +   P +  +  G+++ +SSIA  +A  +VS Y ASK  + +   S+ C
Sbjct: 138 SQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLAC 187

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+ F  DVS +A+++ + +  +   G +D+++NNAGI   + ++     + + ++D+NL 
Sbjct: 53  AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT 112
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +     M++   G I+ I+S+  L   +  + Y A+K GV
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV 158

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 31  KADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           + DV+DK           KI G  D ++NNAG++    +     +E +R+ DVN++  + 
Sbjct: 65  QVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLN 124
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            ++  L  M   N G I+ ISSIA      + +AY  +K+ V
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV 166

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 47  VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHI 106
           ++  G VDIL+NNAGI+   S++  ++ +   + DV+L  + K  +   P M + N G I
Sbjct: 97  IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRI 156
Query: 107 VCISSIAALTAAVNVSAYFASKYGV 131
           +  SS + +        Y A+K G+
Sbjct: 157 IMTSSNSGIYGNFGQVNYTAAKMGL 181

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 47  VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHI 106
           + K G +DIL+NNAGI+   S    +  E + +  V+L+    + R   P  +E   G I
Sbjct: 390 IDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRI 449
Query: 107 VCISSIAALTAAVNVSAYFASKYGV 131
           + I+S + +      + Y +SK G+
Sbjct: 450 INITSTSGIYGNFGQANYSSSKAGI 474

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV D  +++   E   R +G   IL+NNAG    S+    TD      + +   S I  V
Sbjct: 67  DVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPV 126
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R FLP +       IVC++S+ A     ++ A  A++ GV
Sbjct: 127 RAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV 166

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNAGI   + ++   + E   IM+ NL S  ++ +  L  M++   G I+ 
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 142
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + + A+K GV
Sbjct: 143 VGSVVGTMGNAGQANFAAAKAGV 165

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           +V+D A I+ + E +R + G VDIL+NNAGI   + ++   D E   I++ NL S  ++ 
Sbjct: 59  NVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 118
Query: 92  REFLPDMLENNTGHIVCISSIAALTAA 118
           +  +  M++   G I+ I   A   AA
Sbjct: 119 KAVMRAMMKKRHGRIITIGGQANYAAA 145

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 32  ADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIE---RIMDVNLMSN 87
           AD+SD   +K L   ++ + G +DIL+NNA IV     +A  D +++   +I+DVNL   
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIV---PFVAWDDVDLDHWRKIIDVNLTGT 115
Query: 88  IKMVREFLPDM-LENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + R     M      G ++ I+S        N++AY A+K GV
Sbjct: 116 FIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV 160

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 72  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 130
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 131 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 189
Query: 134 NHPSIK 139
              SI+
Sbjct: 190 FFSSIR 195

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%)
Query: 50  IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI 109
           +G +D L+NNAGI   + ++   D + E +++ NL +  +  RE +  M++   G IV I
Sbjct: 78  LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNI 137
Query: 110 SSIAALTAAVNVSAYFASKYGV 131
           +S+  +      + Y ASK G+
Sbjct: 138 TSVVGILGNPGQANYVASKAGL 159

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 50  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 108
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 109 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 167
Query: 134 NHPSIK 139
              SI+
Sbjct: 168 FFSSIR 173

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 69  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 127
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 128 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 186
Query: 134 NHPSIK 139
              SI+
Sbjct: 187 FFSSIR 192

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 31  KADVSD-KAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM-DVNLMSNI 88
           + DV D  A    +++ V ++G +DI++ NA + +  + L   D +  R M DVNL    
Sbjct: 95  QVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAW 154
Query: 89  KMVREFLPD-MLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              R  +P  M     G IV  SSI  L  A N+  Y ASK+G+
Sbjct: 155 ITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 58  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 116
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 117 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 175
Query: 134 NHPSIK 139
              SI+
Sbjct: 176 FFSSIR 181

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 65  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 123
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 124 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 182
Query: 134 NHPSIK 139
              SI+
Sbjct: 183 FFSSIR 188

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 69  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 127
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 128 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 186
Query: 134 NHPSIK 139
              SI+
Sbjct: 187 FFSSIR 192

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 19  CLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD-HEI 76
           CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D H +
Sbjct: 78  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHV 136
Query: 77  ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHP 136
            + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +     
Sbjct: 137 RKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFS 195
Query: 137 SIK 139
           SI+
Sbjct: 196 SIR 198

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 55  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 113
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 114 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 172
Query: 134 NHPSIK 139
              SI+
Sbjct: 173 FFSSIR 178

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 56  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 114
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 115 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG 173
Query: 134 NHPSIK 139
              SI+
Sbjct: 174 FFSSIR 179

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 50  VSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH-ITQTSLSLFHDDI 108
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           H + R+M+VN +S + M    LP ML+ + G I  ISS+A       V+ Y ASK+ +
Sbjct: 109 HSVRRVMEVNFLSYVVMSTAALP-MLKQSNGSIAVISSLAGKVTYPMVAPYSASKFAL 165

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 19  CLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD-HEI 76
           CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D H +
Sbjct: 58  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDIHHV 116
Query: 77  ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHP 136
            + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +     
Sbjct: 117 RKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGFFS 175
Query: 137 SIK 139
           SI+
Sbjct: 176 SIR 178

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 43  LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE-N 101
           + + V K G +D+L+NNAG+   + V+  TD E +R+++V L S ++  R  L      +
Sbjct: 92  ITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVD 151
Query: 102 NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + G IV  +S+    A  + S Y A+K GV
Sbjct: 152 HGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 75  VSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH-ITNTSLNLFHDDI 133
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTE 133
           H + + M+VN +S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +  
Sbjct: 134 HHVRKSMEVNFLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDG 192
Query: 134 NHPSIK 139
              SI+
Sbjct: 193 FFSSIR 198

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNA I   + ++   + E   IM+ NL S  ++ +  L  M++   G I+ 
Sbjct: 83  EFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 142
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + Y A+K GV
Sbjct: 143 VGSVVGTMGNAGQANYAAAKAGV 165

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 16  IPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTD- 73
           +  CL      A Y    + D    ++      K+ G +D+LI N  I  +S  L H D 
Sbjct: 59  VSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH-ITQTSLSLFHDDI 117
Query: 74  HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           H + R+M+VN +S + M    LP ML+ + G I  ISS+A       ++ Y ASK+ +
Sbjct: 118 HSVRRVMEVNFLSYVVMSTAALP-MLKQSNGSIAVISSLAGKMTQPMIAPYSASKFAL 174

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 21/118 (17%)
Query: 21  PTKTHVAVYFKADVSDKAEIKKLNENVRKI----GYVDILINNAGIVASSSVLAHTDHEI 76
           P KT   ++ + DV+D+   ++L +  RK+    G +DIL+NNAG+        + +   
Sbjct: 57  PQKT---LFIQCDVADQ---QQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNW 102
Query: 77  ERIMDVNLMSNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
           E+ + +NL+S I      L  M + N G    I+ +SS+A L        Y ASK+G+
Sbjct: 103 EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGI 160

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 19  CLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE 77
            L  +   A+    DV ++ +  +    + +  G +  L+NNAG+     V   T  E  
Sbjct: 44  ALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWR 103
Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            ++D NL      +R  +P +L    G IV + S+A        +AY ASK+G+
Sbjct: 104 LVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL 157

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNA I   + ++   + E   IM+ NL S  ++ +  L  M++   G I+ 
Sbjct: 83  EFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIIN 142
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + Y A+K GV
Sbjct: 143 VGSVVGTMGNAGQANYAAAKAGV 165

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADV++  ++  +  + V   G VDIL+NNAG+   + ++   + E + +++ NL 
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLK 115
Query: 86  SNI---KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 K V  F   M+    G IV I+S+  +T     + Y A+K GV
Sbjct: 116 GVFLCTKAVSRF---MMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV 161

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADVSD A +++L     +  G VD+L+NNAGI   +++    D   +R++ VNL 
Sbjct: 79  ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLK 138
Query: 86  SNIKMVRE 93
                +RE
Sbjct: 139 GTFNTLRE 146

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 19  CLPTKTHVAVY-----FKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHT 72
           C  T T ++ Y       AD+S +A  ++L + + ++   +DIL+NNAG    +++ ++ 
Sbjct: 66  CADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYP 125
Query: 73  DHEIERIMDVNLMSNIKMVREFLPDMLEN----NTGHIVCISSIAALTA-AVNVSAYFAS 127
               E++M +N+ S    +++ LP +  +    N   ++ I S+A ++A      AY  S
Sbjct: 126 VSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPS 185
Query: 128 K 128
           K
Sbjct: 186 K 186

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           D  D   ++K+ ++ V  +G +DI++ NAG+ A  +    T  +   +MD+N+      V
Sbjct: 81  DTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTV 140
Query: 92  REFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVT 132
               P ++E    G I+ ISS A +     +  Y ASK+ VT
Sbjct: 141 MAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVT 182

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASS--SVLAHTDHEIERIMDVNLM 85
           +   DV+   +++ L +  + K G +DI+  N G+++++  S+L   + + +R+MD+N+ 
Sbjct: 68  FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS-AYFASKYGV 131
               + +     M+    G IV  +SI++ TA   VS  Y A+K+ V
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 174

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 31  KADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           K DVS   +++   + V    G  DIL+NNAGI         T  + ++  ++N+ S   
Sbjct: 60  KCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 119
Query: 90  MVREFLPDMLENNTGHIVCISS 111
           M + F+P M  N  G I+ ++S
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTS 141

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 23/138 (16%)
Query: 13  ILFIPWCLPTKTHVAVYFK-------------ADVSDKAEIKK-LNENVRKIGYVDILIN 58
           I  +P+ L T   +A   K             ADV D+  +   L   + ++G +DI++ 
Sbjct: 49  IASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVA 108
Query: 59  NAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTA 117
           NAGI   S+     D     ++DVNL      ++  +P +++  T G IV ISS A L  
Sbjct: 109 NAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG 164
Query: 118 AVNVS----AYFASKYGV 131
             +       Y A+K+GV
Sbjct: 165 VGSADPGSVGYVAAKHGV 182

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           ++  A+V+ + E++  L     K G +D+ +N AGI  +           HT  + +R++
Sbjct: 58  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 117
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +VNL+    ++R     M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 118 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 174

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 29  YFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           YF  DV+D   +KK  E  + K+  +D+L+NNA   +   + +    E + I+ V L + 
Sbjct: 51  YFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAP 110
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            ++ R    D L  N G I+ I+S  A  +  +  AY ++K G+
Sbjct: 111 YELSR-LCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGI 153

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           ++  A+V+ + E++  L     K G +D+ +N AGI  +           HT  + +R++
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +VNL+    ++R     M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 175

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 13/117 (11%)
Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVL------AHTDHEIERIM 80
           ++  A+V+ + E++  L     K G +D+ +N AGI  +           HT  + +R++
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVI 118
Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +VNL+    ++R     M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 119 NVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 175

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVNLMSNIK 89
           DV ++A I+++  ++  +   +DIL+NNAG+ A     AH  +  + E ++D N    + 
Sbjct: 54  DVRNRAAIEEMLASLPAEWCNIDILVNNAGL-ALGMEPAHKASVEDWETMIDTNNKGLVY 112
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           M R  LP M+E N GHI+ I S A        + Y A+K
Sbjct: 113 MTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATK 151

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 51  GYVDILINNAGIVAS-SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI 109
           G +DIL++NA +     S++  T+   ++ +D+N+ +   M +  +P+M +   G +V +
Sbjct: 91  GGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIV 150
Query: 110 SSIAALTAAVNVSAYFASK 128
           SSIAA + +   S Y  SK
Sbjct: 151 SSIAAFSPSPGFSPYNVSK 169

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 33  DVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           D S + E +KL + V  +  G +DILINN G + S   L +T  +    +  NL S   +
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC 140
            +   P +  +  G+I+ +SSIA + +A   S Y A+K  + +   ++ C
Sbjct: 131 SQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLAC 180

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 32  ADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIE---RIMDVNLMSN 87
           AD+SD   +K L   ++ + G +DIL+NNA IV     +A  D +++   +I+DVNL   
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIV---PFVAWDDVDLDHWRKIIDVNLTGT 115
Query: 88  IKMVREFLPDM-LENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             + R            G ++ I+S        N +AY A+K GV
Sbjct: 116 FIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGV 160

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+    + K++E++R    G  DIL+NNAGI     +    D   + ++ VNL++ +++
Sbjct: 251 DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRL 310
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +      G ++ +SSIA +      + Y  +K G+
Sbjct: 311 TEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 351

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+    + K++E++R    G  DIL+NNAGI     +    D   + ++ VNL++ +++
Sbjct: 259 DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRL 318
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +      G ++ +SSIA +      + Y  +K G+
Sbjct: 319 TEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 359

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+    + K++E++R    G  DIL+NNAGI     +    D   + ++ VNL++ +++
Sbjct: 288 DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRL 347
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +      G ++ +SSIA +      + Y  +K G+
Sbjct: 348 TEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 388

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+    + K++E++R    G  DIL+NNAGI     +    D   + ++ VNL++ +++
Sbjct: 267 DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRL 326
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +      G ++ +SSIA +      + Y  +K G+
Sbjct: 327 TEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 367

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 33  DVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+    +  + E+VR   G  DIL+NNAG  ++ +++   D + +   ++++M+ +++ 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLA 124
Query: 92  REFLPDMLENNTGHIVCISSIAAL 115
           R  +P M     G I+  +SI A+
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAV 148

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           DV+    + K++E++R    G  DIL+NNAGI     +    D   + ++ VNL++ +++
Sbjct: 275 DVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRL 334
Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +      G ++ +SSIA +      + Y  +K G+
Sbjct: 335 TEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGM 375

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 27  AVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV+   DV+DKA     ++E   K+G  D+L+NNAGI     +L  T+ ++++I  VN+ 
Sbjct: 55  AVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114
Query: 86  S 86
           S
Sbjct: 115 S 115

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 33  DVSDKAEIKKLNENVRKIG-YVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D+  I+     +   G +VDILINNAGI     ++       ++++D NL S   + 
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVS 125
Query: 92  REFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           R     M+  N+ G I+ I S+ +  A   V+ Y A+K G+
Sbjct: 126 RSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGI 166

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 28  VYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNLM 85
           V  + DV D   +K  ++  V ++G +DI++ NAG+      L    D+  + ++D+NL 
Sbjct: 79  VTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLT 138
Query: 86  SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGV 131
                V+  +P +L     G IV  SS+    A  N   Y A+K+GV
Sbjct: 139 GVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGV 185

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 53  VDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSI 112
           +DIL+NNAGI      L  +  + E ++ VNL     + +  L  M++   G IV ISS+
Sbjct: 86  IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSV 145
Query: 113 AALTAAVNVSAYFASKYGV 131
              T  V    Y  +K G+
Sbjct: 146 VGFTGNVGQVNYSTTKAGL 164

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  K DVSD+ ++    E  RK +G  D+++NNAG+  S+ + + T   ++++ ++N+ 
Sbjct: 53  AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112
Query: 86  SNIKMVREFLPDM-LENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             I  ++  +     E + G I+   S A       ++ Y +SK+ V
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV 159

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 31  KADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           + DVS   + +  + +   K G VD+L+NNAG   + +V+   +   +RI  VN+     
Sbjct: 79  RVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFL 138
Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
             +  +P    N  G I+  +S  A +A  + +AY ASK  ++
Sbjct: 139 CSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAIS 181

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 33  DVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+    +  + E+VR   G  DIL+NNAG  ++ +++   D + +   ++ +M+ +++ 
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLA 124
Query: 92  REFLPDMLENNTGHIVCISSIAAL 115
           R  +P M     G I+  +SI A+
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAV 148

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  KAD+    EI KL ++ V   G++DI ++N+G+V+   +   T+ E +R+  +N  
Sbjct: 70  AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTR 129
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFS 142
               + RE    + E   G IV  SS  +   +V   + F+   G  ++   ++ FS
Sbjct: 130 GQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSF--VRIFS 182

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 28  VYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           +  + DVSD+A+   L    V + G +D++  NAG+   + +   T  ++  I  VN+  
Sbjct: 63  IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNG 122
Query: 87  NIKMVREFLPDMLENNTGHIVCISSI-AALTAAVNVSAYFASK 128
               V+  L  ++ + +G +V  SSI   +T     S Y A+K
Sbjct: 123 TFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK 165

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
           + G VDIL+NNAGI   + +    + E   I + NL S  ++ +  L    +   G I+ 
Sbjct: 80  EFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLRGXXKKRQGRIIN 139
Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           + S+         + Y A+K GV
Sbjct: 140 VGSVVGTXGNAGQANYAAAKAGV 162

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 29  YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           + + D+ D   I+ L + +RK  G +++L+NNA +   S      D + E  +  N  + 
Sbjct: 56  FHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFAT 115
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
             M  E LP M  +  G +V ISS+  L A  N S     ++
Sbjct: 116 RNMCNELLPIMKPH--GRVVNISSLQCLRAFENCSEDLQERF 155

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 29  YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           +F+ D SD+    KL +   K  G V  L+NNAGI  + SV   T  E  +++ VNL   
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGV 117
Query: 88  IKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGV 131
               R  +  M     G  I+ +SSI       ++ AY ASK  V
Sbjct: 118 FFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 29  YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           +F+ D SD+    KL +   K  G V  L+NNAGI  + SV   T  E  +++ VNL   
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGV 117
Query: 88  IKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGV 131
               R  +  M     G  I+ +SSI       ++ AY ASK  V
Sbjct: 118 FFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 33  DVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+ +   K   + V  + G V IL NNAG+     +   +  + + ++ VNL   +  V
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGV 126
Query: 92  REFLPDML------ENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             F+P M+      E   GH+V  +S+AA  AA +   Y  +K+ V
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAV 172

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           D++D   +++L E + ++   D+L+NNAGI  S     +     ER++ +NL S   +  
Sbjct: 62  DITDSQRLQRLFEALPRL---DVLVNNAGI--SRDREEYDLATFERVLRLNL-SAAMLAS 115
Query: 93  EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC 140
           +    +L    G I+ I+S+ +   + +  AY ASK  + +   S+ C
Sbjct: 116 QLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLAC 163

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           A+    D++D A++  L +E ++  G VD++INNA  V S    A+T  E +   +++ +
Sbjct: 62  ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTV 121
Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
              +++++ F P  LE + G +V ++S+    +     AY  +K
Sbjct: 122 FGALRLIQGFTP-ALEESKGAVVNVNSMVVRHSQAKYGAYKMAK 164

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  KAD+    EI KL ++ V   G++DI ++N+G+V+   +   T+ E +R+  +N  
Sbjct: 70  AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTR 129
Query: 86  SNIKMVREFLPDMLENNTGHIVCISS 111
               + RE    + E   G IV  SS
Sbjct: 130 GQFFVAREAYRHLTEG--GRIVLTSS 153

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 28  VYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           + ++ D+S++ +I  +   +R +   VDI INNAG+    ++L+ +    + + +VN+++
Sbjct: 86  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 145
Query: 87  NIKMVREFLPDMLENNT--GHIVCISSIAA-LTAAVNVSAYF-ASKYGVT 132
                RE    M E N   GHI+ I+S++      ++V+ ++ A+KY VT
Sbjct: 146 LSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVT 195

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 51  GYVDILINNAGIVAS-SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI 109
           G VDIL++NA +     +++  T+   ++I+ VN+ + + M +  +P+M +   G ++ +
Sbjct: 90  GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIV 149
Query: 110 SSIAALTAAVNVSAYFASK---YGVTEN 134
           SS+ A     N+  Y  SK    G+T+N
Sbjct: 150 SSVGAYHPFPNLGPYNVSKTALLGLTKN 177

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 29  YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           + + D+ D   I+ L + +RK  G +D+L+NNAGI    +       + E  M  N    
Sbjct: 58  FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 117
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
             +  E LP  L    G +V +SSI ++ A  + S     K+
Sbjct: 118 RDVCTELLP--LIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 29  YFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
           + + D+ D   I+ L + +RK  G +D+L+NNAGI    +       + E  M  N    
Sbjct: 58  FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGT 117
Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
             +  E LP  L    G +V +SSI ++ A  + S     K+
Sbjct: 118 RDVXTELLP--LIKPQGRVVNVSSIMSVRALKSCSPELQQKF 157

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 32  ADVS-DKAEIKKLNENVRKIGYVDILINNAGIV----ASSSVLAHTDHEIERIMDVNLMS 86
           ADV+ D  + + L+  + K G +DIL+NNAG       S +  A +    +  +++NL S
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAA 114
            I + ++ +P  L +  G IV ISSIA+
Sbjct: 125 VIALTKKAVPH-LSSTKGEIVNISSIAS 151

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNAG--IVASSSVLAHTDHEIERIMDVNLM 85
           + +ADV+ K ++ K+  E +   G +D LINNAG  +     ++ + + E   ++  NL 
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLT 120
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGV 131
           +   +++  +P M + N G I+      A +A   +  SA+ A+K G+
Sbjct: 121 AVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGL 168

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 19  CLPTKTHVAVYFKADVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE 77
            L  +   A Y   ++ D A+ +  + + +   G +D L+NNAG+     + A  D  + 
Sbjct: 49  ALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVA 108
Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
             ++ NL+    M    +P  L+   G IV ISS  A+T   N S Y ASK
Sbjct: 109 S-LERNLIHYYAMAHYCVP-HLKATRGAIVNISSKTAVTGQGNTSGYCASK 157

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 33  DVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D A++ ++ + +  +   +D L+N AGI+   +    +  + ++   VN+     + 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLF 113
Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           ++ +        G IV ++S AA T  + +SAY ASK
Sbjct: 114 QQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASK 150

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 27  AVYFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + D++ + E+  L +  + K+G VDIL+NNAG             +  R  ++N+ 
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAG-GGGPKPFDMPMADFRRAYELNVF 120
Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS 122
           S   + +   P+M +N  G I+ I+S+AA    +N++
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT 157

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 50  IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI 109
            G +D+++NNAGI+   S    +D + + I  V+L  + ++ R     M +   G I+  
Sbjct: 111 FGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMT 170
Query: 110 SSIAALTAAVNVSAYFASKYGV 131
           SS + +      + Y A+K G+
Sbjct: 171 SSASGIYGNFGQANYSAAKLGL 192

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 32  ADVS-DKAEIKKLNENVRKIGYVDILINNAG-IVASSSVLAHTDHEIE---RIMDVNLMS 86
           ADV+ +  + + +N  +++ G +D+L+NNAG  +  +     TD  I+   + + +NL +
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 124
Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFA 126
            I+M ++  P ++ +  G IV +SSI A   A     Y+A
Sbjct: 125 VIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYA 163

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 33  DVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV D+ +I    E  ++K G +DIL+NNA  ++ ++ L      ++ +M+VN        
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLAS 168
Query: 92  REFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGVT 132
           +  +P + ++   HI+ IS    L         AY  +KYG++
Sbjct: 169 KACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMS 211

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 20  LPTKTHVAVYFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER 78
           L  K + A   K D + +++ I+ +   V+  G +  L+NNAG+V     +     +   
Sbjct: 74  LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHH 133
Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++D NL S     RE L  M ++  G +V ++SI      +  + Y ASK G+
Sbjct: 134 VIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGM 186

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 49  KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFL--PDMLENNTGHI 106
           + G + IL+N+AG           D     ++D NL    ++ RE L    M E   G I
Sbjct: 98  RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRI 157
Query: 107 VCISSIAALTAAVNVSAYFASKYGV 131
           V I+S       +  + Y ASK+GV
Sbjct: 158 VNIASTGGKQGVMYAAPYTASKHGV 182

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           AV    DV + A+I      V R+ G +D L+NNAGIV     +     E IER + VN+
Sbjct: 78  AVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNV 137
Query: 85  MSNIKMVREFL---PDMLENNTGHIVCISSIAA-LTAAVNVSAYFASK 128
             +I    E +     +     G IV +SS AA L +A     Y ASK
Sbjct: 138 TGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASK 185

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 43  LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN 102
           + E + + G +D L+NNAG+  +   +  T  + +  + VN+     + +    + L+  
Sbjct: 87  VREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQG 146
Query: 103 TGHIVCISS 111
           +GHIV I++
Sbjct: 147 SGHIVSITT 155

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	182
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-41
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	3e-30
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-30
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-29
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-28
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-27
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-27
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-27
4dqx_A	277	Probable oxidoreductase protein; structural genomi	8e-27
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-26
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-26
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-26
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-26
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-26
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-26
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-26
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-25
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-25
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-25
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-25
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-25
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-25
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	3e-25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-25
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-25
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-25
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	5e-25
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	6e-25
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-25
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	7e-25
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	9e-25
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-24
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	2e-24
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-24
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-24
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-24
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-24
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-24
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-24
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-24
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	5e-24
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-24
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	6e-24
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-24
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-24
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	7e-24
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-24
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	8e-24
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-23
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-23
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-23
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-23
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-23
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-23
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-23
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-23
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-23
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-23
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-23
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-23
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-23
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	9e-23
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-22
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-22
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-22
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-22
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-22
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-22
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	2e-22
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-22
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-22
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-22
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-22
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	3e-22
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-22
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-22
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-22
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	6e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	6e-22
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	8e-22
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	8e-22
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-22
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	1e-21
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-21
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-21
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-21
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-21
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-21
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	3e-21
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-21
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-21
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	3e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-21
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-21
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	7e-21
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	8e-21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-20
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-20
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-20
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-20
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-20
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-20
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-20
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	4e-20
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-20
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-20
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-20
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-20
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	5e-20
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-20
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	7e-20
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-19
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-19
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-19
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-19
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-19
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-19
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-19
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-19
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-19
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-19
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	6e-19
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-19
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-18
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-18
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-18
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-18
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-18
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-18
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-18
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-18
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	9e-18
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-17
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-17
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-17
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	6e-17
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	8e-17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	8e-17
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-16
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-16
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-16
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-16
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-16
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-16
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-16
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-16
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-16
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-16
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-16
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-16
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	6e-16
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-16
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	6e-16
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-16
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-15
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	1e-15
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-15
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-15
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-15
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-15
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	6e-15
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	7e-15
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-15
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	9e-15
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	4e-14
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-13
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-13
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	5e-13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-12
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-12
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-12
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	4e-12
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	9e-12
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-11
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	9e-08

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  139 bits (352), Expect = 2e-41
 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              F  D S++ +I    + V+  IG V IL+NNAG+V +S + A  D +IE+  +VN++
Sbjct: 82  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 141

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++    + FLP M +NN GHIV ++S A   +   + AY +SK+  
Sbjct: 142 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA 187

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  111 bits (280), Expect = 3e-30
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + DV+ +   K   + V  + G V IL NNAG+     +   +  + + ++ VNL 
Sbjct: 61  VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLH 120

Query: 86  SNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  V  F+P M+E         GH+V  +S+AA  AA +   Y  +K+ V
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAV 172

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  110 bits (278), Expect = 3e-30
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV    E+ +L +   R +G VD++ +NAGIV +  +      +   ++D++L 
Sbjct: 82  AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLW 141

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
            +I  V  FLP +LE  T GHI   +S A L     +  Y  +KYGV
Sbjct: 142 GSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGV 188

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  107 bits (270), Expect = 4e-29
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y    + D    ++      + +G +D+LI N     S ++     H + + M+VN +
Sbjct: 80  AHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFL 139

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S + +    LP ML+ + G IV +SS+A   A   V+AY ASK+ +
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL 184

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  104 bits (263), Expect = 4e-28
 Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +    DV+    +  +        G  DIL+NNAG  ++ +++   D + +   ++ +M
Sbjct: 59  VLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVM 118

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +++ R  +P M     G I+  +SI A+        Y  +K  +
Sbjct: 119 AAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAAL 164

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  103 bits (259), Expect = 1e-27
 Identities = 20/105 (19%), Positives = 42/105 (40%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
            V    D  ++ E+            +++ I N G   +  +L  TD    ++ ++   +
Sbjct: 58  IVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWA 117

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                RE    ML +  G I    + A+L      +A+ ++K+G+
Sbjct: 118 GFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGL 162

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  102 bits (256), Expect = 4e-27
 Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 1/107 (0%)

Query: 26  VAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
           V+ +FK DV+++ E+K+   +  +K G +DIL+NNAGI   S +         RI+DVN+
Sbjct: 54  VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNV 113

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  M +  +P ML    G I+ I+S+ +  A  N +AY  SK+ +
Sbjct: 114 NGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHAL 160

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  101 bits (253), Expect = 7e-27
 Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +    D++D  +     +++  K G VDIL+N A +    S+    D    +IM++N++
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVD-NFRKIMEINVI 119

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   +++     M     G+I  ++S AA     +   Y ++K+ +
Sbjct: 120 AQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL 165

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  101 bits (254), Expect = 8e-27
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + DVS   + + +  +   K G VD+L+NNAG   + +V+   +   +RIM VN+ 
Sbjct: 75  AFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVK 134

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +  +P M  N  G I+  +S  A +A  + +AY ASK  +
Sbjct: 135 GIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAI 180

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 99.6 bits (249), Expect = 2e-26
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +   AD++   ++           G  +++++ AG      V  +T  +I R+M+ NL+
Sbjct: 51  VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLV 110

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S I + ++ +  + E   G +  + S AA     N S Y ASK+G+
Sbjct: 111 STILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM 155

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 99.9 bits (250), Expect = 2e-26
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             +F+ D+ D+ E  +   E    +G VD+L+NNA I A  S L     E  R+++VNL 
Sbjct: 51  GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT 110

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + + +      +M +   G IV ++S+  L A    +AY ASK G+
Sbjct: 111 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 156

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =   99 bits (250), Expect = 2e-26
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 DV D  +++   E   R +G   IL+NNAG    S+    TD      + +   
Sbjct: 61  LFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFF 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S I  VR FLP +       IVC++S+ A     ++ A  A++ GV
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV 166

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =   99 bits (250), Expect = 3e-26
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 25  HVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN 83
               + + DV++  ++K   +   ++ G + +L+NNAGI +   + + +  E  RI+DVN
Sbjct: 46  AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVN 105

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           L       +  +P M+ +    IV ISS+ A     N SAY  SK+ V
Sbjct: 106 LFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAV 153

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =   99 bits (250), Expect = 3e-26
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + DVSD+ +I  + +  V   G VD L+ NAG+V  +S++  T  + +R++ +NL 
Sbjct: 77  AAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLR 136

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +   P M+E   G IV +SS+A   A     AY  SK G+
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGI 182

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 99.1 bits (248), Expect = 4e-26
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 DV+ K +I +      ++  +D+L N AG V   +VL   + + +  M++N+ S
Sbjct: 52  IQTRVLDVTKKKQIDQF---ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRS 108

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
              M++ FLP ML   +G+I+ +SS+A+ +   VN   Y  +K  V
Sbjct: 109 MYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 98.7 bits (247), Expect = 6e-26
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y   DV+  A+ K   +  V   G + +L+NNAGI+   ++  +   E +RI+DVNL 
Sbjct: 55  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +R  +  M E   G I+ ISSI  L   V    Y A+K+ V
Sbjct: 115 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAV 160

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 97.2 bits (243), Expect = 1e-25
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A    AD++D+ E K L   + + G +D+L++  G    +SV       +E ++  +L++
Sbjct: 44  ARALPADLADELEAKAL---LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLT 100

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                   L           V   +          +AY A+K  +
Sbjct: 101 ----AAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGAL 141

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 98.0 bits (245), Expect = 1e-25
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            ++   D+ + A    L       +G +DI++NNAG+++   +   TD +    + VN+ 
Sbjct: 68  DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVE 127

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  ++ R  +P M     G IV ++S   L      + Y  +K  +
Sbjct: 128 APFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAAL 173

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 97.3 bits (243), Expect = 2e-25
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV+  AD+SD A+I+ L     R+ G VDIL+NNAGI   + V        ++I+ +NL 
Sbjct: 53  AVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLS 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +     R  LP M   N G I+ I+S+  L  +   +AY A+K+GV
Sbjct: 113 AVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 97.6 bits (244), Expect = 2e-25
 Identities = 20/106 (18%), Positives = 40/106 (37%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 D+ +  +I +L E  R +G  DIL+ + G       +     + +    +   S
Sbjct: 60  VDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARS 119

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            + + R     M+E   G +V I S+  L    +++     +  V 
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI 165

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 96.8 bits (242), Expect = 2e-25
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              + KAD++ + +I  + + ++     D +  NAGI+   S+       I++++D+N+ 
Sbjct: 45  NLKFIKADLTKQQDITNVLDIIKN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVW 103

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S+I  ++    ++       IV   S     A  N  AY  SK  +
Sbjct: 104 SSIYFIKGLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAI 147

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 97.6 bits (244), Expect = 2e-25
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
                 D+  + E  KL + V  +  G ++IL+NNAG+V        T+ +   IM  N 
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNF 131

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +   + +   P +  +  G+++ +SSIA  +A  +VS Y ASK  +
Sbjct: 132 EAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 178

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 97.3 bits (243), Expect = 3e-25
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            ++  AD++  +EI  +      + G  DIL+NNAG+     +      + +RI+ VNL 
Sbjct: 78  VLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLS 137

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S+   +R  +P M +   G I+ I+S   L A+   SAY A+K+G+
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGI 183

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 96.8 bits (242), Expect = 3e-25
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y   DV+ + + +++      + G VD L+NNAGI     +   +     +++++NL 
Sbjct: 53  ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                ++  +P M +   G IV ISS A L      S+Y ASK+GV
Sbjct: 113 GVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV 158

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 96.5 bits (241), Expect = 4e-25
 Identities = 20/105 (19%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
               ++D+  +   +   + ++ + +VD L++ A +   +++ A +  E    +D+N++ 
Sbjct: 50  VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIV 109

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             ++ R+ LP +   + G ++ I+S A        + Y ASK+ +
Sbjct: 110 PAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHAL 153

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 96.4 bits (241), Expect = 4e-25
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             +F+ D SD+    KL +   +  G V  L+NNAGI  + SV   T  E  +++ VNL 
Sbjct: 56  IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115

Query: 86  SNIKMVREFLPDMLENNTGH-IVCISSIAALTAAVNVSAYFASKYGV 131
                 R  +  M     G  I+ +SSI       ++ AY ASK  V
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 96.5 bits (241), Expect = 5e-25
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A    AD++D      + E +     VD+L+NNAGI+A +     +      ++ VNL +
Sbjct: 81  AEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDA 140

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              + R F   ML + +G IV I+S+ +     NV+AY ASK+ V
Sbjct: 141 AWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAV 185

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 95.7 bits (239), Expect = 6e-25
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                AD+SD A++++L    V + G++D L+NNAG+    ++   T+ + +  M+ NL 
Sbjct: 60  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 119

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +     M   ++GHI  I+S+AA  A  + S Y  SK+G 
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQ 165

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 96.5 bits (241), Expect = 6e-25
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +     AD+  +   + +   + K   VDILINN GI          D +  ++ +VN+M
Sbjct: 62  ILQPVVADLGTEQGCQDV---IEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIM 118

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S +++ R +L  M+E   G ++ I+S AA+  +  ++ Y A+K   
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQ 164

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 95.7 bits (239), Expect = 7e-25
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV ++ +  +         G +  L+NNAG+     V   T  E   ++D NL 
Sbjct: 52  ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLT 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
                +R  +P +L    G IV + S+A        +AY ASK+G+ 
Sbjct: 112 GAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL 158

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 95.7 bits (239), Expect = 9e-25
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
            +   ADVSD+A+++        + G +D   NNAGI    +          ++++ +NL
Sbjct: 66  VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 + + L  M E  +G +V  +S+  +    N S Y A+K+GV
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 172

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +Y  AD+S    ++ L +  VR++G +DIL+NNAGI  ++ +      + + I+ +NL 
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +        LP M +   G I+ I+S   L A+ N SAY A+K+GV
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV 162

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 95.6 bits (239), Expect = 1e-24
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
                 D+S ++E ++L   V     G ++IL+NNAGIV       +T  +   IM +N 
Sbjct: 60  VEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINF 119

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +   +     P +  +  G++V ISS++   A    + Y A+K  +
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 166

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 95.3 bits (238), Expect = 2e-24
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
           AV+   D++++  ++ L +  +   G +DI+ NNA     + +L    T    +    VN
Sbjct: 59  AVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVN 118

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + M +  +P ++    G IV ISS  A  A    +AY  +K  +
Sbjct: 119 ARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAI 166

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
            +  KADVS K ++++           +D+L NNAGI+   + +A    E+ ER++ VNL
Sbjct: 58  VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            S     R  +P ML+   G IV  +SIA +      + Y  +K+G+
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGL 164

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 95.3 bits (238), Expect = 2e-24
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIER 78
           +      A+    DV+D+  +    +      G +D+L+NNAG++  S + A    E ER
Sbjct: 48  IRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWER 107

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           ++DVN+   +  +   LP M    +G I+ I SI AL+     + Y A+K+ V 
Sbjct: 108 MIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVR 161

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
                  V    + ++L    V   G VDIL++NA +      +     E+ ++I+ VN+
Sbjct: 65  VTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNV 124

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + + M +  +P+M +   G ++ +SS+ A     N+  Y  SK  +
Sbjct: 125 KATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTAL 171

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 94.6 bits (236), Expect = 2e-24
 Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
             Y   D+++ + +K+L N  V+  G +D L+ NAG++     +   D    +++ D+N 
Sbjct: 52  FFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINF 111

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            S + +V   LP++ + N G++V +SS A      +  AY +SK  +
Sbjct: 112 FSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL 157

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 94.5 bits (236), Expect = 2e-24
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIV---ASSSVLAHTDHEIERIMDV 82
            +  +ADV+D+ ++       + + G +D+L+NNAGI     +  +      + +++M V
Sbjct: 54  VLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAV 113

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           N+       R  LP ML    G IV I+S+A+L A    SAY  SK  V
Sbjct: 114 NVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAV 162

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 94.6 bits (236), Expect = 2e-24
 Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 27  AVYFKADVSDK-AEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
             +   DV+   AE KKL  +   ++  VDILIN AGI+         DH+IER + +N 
Sbjct: 57  ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINF 108

Query: 85  MSNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
              +      L    +   G    I  I S+    A   V  Y ASK  V
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAV 158

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 94.1 bits (235), Expect = 3e-24
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  KA+V   A+IK++  +     G +D+ +NNA       V+   +   +  M++N  
Sbjct: 56  VLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAK 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + +   +E    M +N  GHIV ISS+ ++    N +    SK  +
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL 161

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 94.5 bits (236), Expect = 4e-24
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
             Y   D++++ E  +  +      G +  +++ AG   +   +   D E   R +D+N+
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNV 124

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              + +++    +M+    G  V ISSIAA        AY  +K  V
Sbjct: 125 NGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 171

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 94.5 bits (236), Expect = 4e-24
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V    D  D   ++K+ ++ V  +G +DI++ NAG+ A  +    T  +   +MD+N+ 
Sbjct: 75  IVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVT 134

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
                V    P ++E    G I+ ISS A +     +  Y ASK+ V
Sbjct: 135 GTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAV 181

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 94.6 bits (236), Expect = 4e-24
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-----ERIM 80
           AV    DV    + K+     +   G +D LI NAGI   S+ LA    +      + I 
Sbjct: 53  AVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIF 112

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            VN+   I  V+  LP ++ +  G +V   S A          Y A+K+ V
Sbjct: 113 HVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAV 162

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 93.4 bits (233), Expect = 5e-24
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 6/113 (5%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI 79
           L            D++   E+++L E +        ++++AG      +      +I+ +
Sbjct: 45  LSNNVGYRA---RDLASHQEVEQLFEQLD--SIPSTVVHSAGSGYFGLLQEQDPEQIQTL 99

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           ++ NL S I ++RE +    +    ++V I S AA       S Y A K+ V 
Sbjct: 100 IENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVK 151

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 93.8 bits (234), Expect = 5e-24
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A  +  DV+ +  +    +  VR  G +D L NNAG   + + +     +   R++ +N+
Sbjct: 58  ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +++     M+  N G IV  +S+A +    N++AY  SK  +
Sbjct: 118 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 164

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 93.7 bits (234), Expect = 6e-24
 Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A    ADV+D   +         +  V IL+N+AGI      L   D    ++M VN+  
Sbjct: 60  AARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDG 119

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGV 131
                R F   M+    G IV + S++          S+Y ASK  V
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV 166

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 93.4 bits (233), Expect = 7e-24
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+   AD+S +A++       + K G VDIL+NNAGI          + E  +RI+ VN+
Sbjct: 57  ALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNV 116

Query: 85  MSNIKMVREFLPDMLENNTGH----IVCISSIAALTAAVNVSAYFASKYGV 131
                M  + +P   EN        I+ ++S  A     N++ Y A+K  V
Sbjct: 117 RGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWV 167

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 93.3 bits (233), Expect = 7e-24
 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +++ + DVS +A+   +     R++G +++L+NNAGI+    +      +  R++ +N  
Sbjct: 54  SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S     ++ +  M E   G I+ ++S+++       + Y ASK  V
Sbjct: 114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAV 158

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 93.3 bits (233), Expect = 7e-24
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + D++ + E+  L +  + K+G VDIL+NNAG             +  R  ++N+ 
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVF 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + +   P+M +N  G I+ I+S+AA    +N+++Y +SK   
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA 166

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 93.3 bits (233), Expect = 8e-24
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  K DV+ ++++  L    +++ G +D++INNAG+    S    +  +  +++D NL 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
                 RE +   +EN+  G ++ +SS+           Y ASK G+
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM 165

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 93.8 bits (234), Expect = 8e-24
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV D A +++L  + + + G +D+++ NAG+++   V   TD + + ++ VNL 
Sbjct: 79  ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLT 138

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
              + +R  +P M+E    G IV +SS A L A      Y ASK+G+
Sbjct: 139 GTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGL 185

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 93.4 bits (233), Expect = 1e-23
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
            V  + DV D   +K   +  V ++G +DI++ NAGI      L  T  E    ++D+NL
Sbjct: 78  IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINL 137

Query: 85  MSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
               K V+  +P M+     G I+  SS+  L A  +   Y A+K+GV
Sbjct: 138 AGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGV 185

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + DV+ +  I       V   G +DIL+NNA +   + ++  T    E++  +N+ 
Sbjct: 56  AYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVA 115

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  ++     M+     G I+ ++S A       V+ Y A+K  V
Sbjct: 116 GTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAV 162

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 92.2 bits (230), Expect = 1e-23
 Identities = 22/107 (20%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             Y   DVS    +++ ++ V  + G VD+++ NAG+     +   ++ E   +++VNL+
Sbjct: 54  VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLL 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
              + ++ FL  +       +V  S ++A         Y ++K+   
Sbjct: 114 GVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP-YGGGYVSTKWAAR 159

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 92.7 bits (231), Expect = 2e-23
 Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 9/113 (7%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            + ++ D+S++ +I  +   +R +   VDI INNAG+    ++L+ +    + + +VN++
Sbjct: 85  LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVL 144

Query: 86  SNIKMVREFLPDMLENNT--GHIVCISSIAAL----TAAVNVSAYFASKYGVT 132
           +     RE    M E N   GHI+ I+S++       +  +   Y A+KY VT
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF--YSATKYAVT 195

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 92.2 bits (230), Expect = 2e-23
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
               + DV ++A I+++  ++      +DIL+NNAG+            E  E ++D N 
Sbjct: 48  LYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNN 107

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
              + M R  LP M+E N GHI+ I S A        + Y A+K  V 
Sbjct: 108 KGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 D+ D    +K    +  IG VD+L+NNA +V     L  T    +R   VNL S
Sbjct: 54  IEPVCVDLGDWDATEKA---LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRS 110

Query: 87  NIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
             ++ +    DM+     G IV +SS+ A     N+  Y ++K  +
Sbjct: 111 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAM 156

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 D+ D    ++    +  +G VD+L+NNA +      L  T    +R  +VNL +
Sbjct: 54  IEPVCVDLGDWEATERA---LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110

Query: 87  NIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
            I++ +     ++     G IV +SS  +  A  N S Y ++K  +
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL 156

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 91.8 bits (229), Expect = 2e-23
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  K DVS   +++   + V    G  DIL+NNAGI         T  + ++  ++N+ 
Sbjct: 56  VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   M + F+P M  N  G I+ ++S          + Y ++K   
Sbjct: 116 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAAN 161

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           A+    D++D A++  L +E ++  G VD++INNA  V S    A+T  E +   +++ +
Sbjct: 62  ALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTV 121

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +++++ F P + E+  G +V ++S+    +     AY  +K  +
Sbjct: 122 FGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSAL 167

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 92.4 bits (230), Expect = 3e-23
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
               + D++   +IK   EN+ +    +DIL+NNAG    S  +     E I+ + D N+
Sbjct: 89  VHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNV 148

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            + I + +  LP     N+G IV + SIA   A    S Y ASK+ V 
Sbjct: 149 TALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVG 196

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 91.9 bits (229), Expect = 3e-23
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 33  DVSDKAEIKK-LNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV+D   I     + + + G VD+L+NNAG     +    T+ E+  + ++++    ++ 
Sbjct: 59  DVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLT 118

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           R  LP M E  +G +V ISS     +    SAY A+K  +
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAAL 158

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 D+++     +L        G +D+L+NNAGI     V+       +  + VNL 
Sbjct: 72  VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLR 131

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   +       M+     G I+ ++S AAL    +  AY  SK G+
Sbjct: 132 APALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGL 178

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 90.7 bits (226), Expect = 8e-23
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + DV+DK           K  G  D ++NNAG++    +     +E +R+ DVN++
Sbjct: 61  TLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  ++  L  M   N G I+ ISSIA      + +AY  +K+ V
Sbjct: 121 GLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAV 166

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 90.7 bits (226), Expect = 9e-23
 Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           AV+   DV+ + ++K L +E +R+ G +D ++NNAG          T  +   +++++NL
Sbjct: 56  AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 115

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +    + +  LP + ++  G+++ ISS+           Y A+K  V
Sbjct: 116 LGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAV 161

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
           A     D+S    I      V    G  D+L+NNAG+      L      E + ++ VNL
Sbjct: 80  AESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNL 139

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +   ++R F P M+    GHI+ ISS+A      + +AY ASK+G+
Sbjct: 140 KAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGL 186

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  +AD ++ AE+ +L E V+   G +D+L  NAG  +   +   T+ + +   D N+ 
Sbjct: 77  AVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVK 136

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  V++ LP +       +V   S A  T     S Y ASK  +
Sbjct: 137 GVLFTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAAL 180

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 90.7 bits (226), Expect = 1e-22
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
            +  + DV D   ++   ++ V ++G +DI++ NA + +  + L   D +    ++DVNL
Sbjct: 91  IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL 150

Query: 85  MSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                  R  +P ++     G IV  SSI  L  A N+  Y ASK+G+
Sbjct: 151 NGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGL 198

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 89.8 bits (224), Expect = 2e-22
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV+D+  I+   ++   +  +VDILINNAGI     ++       ++++D NL 
Sbjct: 60  AHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLT 119

Query: 86  SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + R     M+  N+ G I+ I S+ +  A   V+ Y A+K G+
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGI 166

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 12/109 (11%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            ++ + DV+D+ +++    + V   G +DIL+NNAG+          +   E+ + +NL+
Sbjct: 60  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINLV 111

Query: 86  SNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGV 131
           S I      L  M + N G    I+ +SS+A L        Y ASK+G+
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGI 160

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 89.9 bits (224), Expect = 2e-22
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
                 D S + E +KL + V  +  G +DILINN G + S   L +T  +    +  NL
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            S   + +   P +  +  G+I+ +SSIA + +A   S Y A+K  +
Sbjct: 125 ESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 171

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 89.9 bits (224), Expect = 2e-22
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIV--ASSSVLAHTDHEIERIMDVN 83
             +   DV+   +++ L +  + K G +DI+  N G++     S+L   + + +R+MD+N
Sbjct: 66  ISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN 125

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS-AYFASKYGV 131
           +     + +     M+    G IV  +SI++ TA   VS  Y A+K+ V
Sbjct: 126 VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 174

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 89.5 bits (223), Expect = 2e-22
 Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  K DVSD+ ++     +  + +G  D+++NNAG+  S+ + + T   ++++ ++N+ 
Sbjct: 53  AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK 112

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
             I  ++  +    +    G I+   S A       ++ Y +SK+ V
Sbjct: 113 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV 159

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 89.5 bits (223), Expect = 2e-22
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV+   DV+DKA      +E   K+G  D+L+NNAGI     +L  T+ ++++I  VN+ 
Sbjct: 55  AVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF 114

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           S    ++       E    G I+  +SIAA+     +SAY  +K+ V
Sbjct: 115 SVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 89.9 bits (224), Expect = 2e-22
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  K DV D+A ++    E    +G +DI I NAGI   + +      + + ++  NL 
Sbjct: 73  CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLT 132

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +    P M++ N G IV +SS+   +A    ++Y +SK+GV
Sbjct: 133 GTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGV 178

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 89.5 bits (223), Expect = 3e-22
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A     DV D+A  + L    VR+ G +D   NNAG + +   ++    E     +D NL
Sbjct: 59  AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNL 118

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
            S     +  +P +     G +   SS    TA    V+ Y ASK G+
Sbjct: 119 TSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL 166

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 89.2 bits (222), Expect = 3e-22
 Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 26  VAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
                  D+S      ++  E + + G +D L+NNAG+  +   +  T  + +  + VN+
Sbjct: 69  DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNV 128

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGV 131
                + +    +ML+  +GHIV I++         +  +    +K G+
Sbjct: 129 AGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGL 177

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 89.2 bits (222), Expect = 4e-22
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 4/110 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+    DV+D   ++ L    V K G VD+L NNAG  A +  +        ++++D NL
Sbjct: 76  ALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNL 135

Query: 85  MSNIKMVREFLPDMLENNT--GHIVCISSIAALTAAVNVSAYFASKYGVT 132
                  +E    M       G I+   SI+A +     + Y A+K+ +T
Sbjct: 136 TGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAIT 185

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 88.7 bits (221), Expect = 4e-22
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 DV+    +  L  + V K G +D+L+NNAG+   + V+  TD E +R+++V L 
Sbjct: 75  VEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLT 134

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
           S ++  R  L      +  G IV  +S+    A  + S Y A+K GV
Sbjct: 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 88.6 bits (220), Expect = 5e-22
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIG-----YVDILINNAGI---VASSSVLAHTDHEIER 78
            V   AD+  +A +++L   VR++         +LINNA     V+   +  +   E+  
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 79  IMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGV 131
              +NL S + +    L    ++   +  +V ISS+ AL        Y A K   
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAAR 176

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 89.2 bits (222), Expect = 6e-22
 Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  +ADV D A ++ + +E + + G++DIL++N GI     V++ TD +   I+  NL+
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLI 168

Query: 86  SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 R  LP M+E    G ++ +SS   L  A   S Y ASK+GV
Sbjct: 169 GAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGV 215

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 89.4 bits (222), Expect = 6e-22
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 33  DVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVR 92
           DV D   +    E V + G VD+L+ NAG+     + A  +  +  ++DVN++  ++M++
Sbjct: 65  DVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ 123

Query: 93  EFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY---GVTE 133
            FLPDM    +G ++   S+  L        Y ASK+   G+ E
Sbjct: 124 AFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCE 167

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 88.0 bits (219), Expect = 8e-22
 Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 23  KTHVAVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIM 80
           +                 ++L +        +D +++NAG++     ++  + ++ + +M
Sbjct: 62  RQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVM 121

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            VN+ +   + +  LP +L+++ G +V  SS        N  AY ASK+  
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFAT 172

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 87.6 bits (218), Expect = 8e-22
 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 DV+D A++ ++ + +  +   +D L+N AGI+   +    +  + ++   VN+ 
Sbjct: 48  FATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVG 107

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
               + ++ +        G IV ++S AA T  + +SAY ASK  + 
Sbjct: 108 GAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALK 154

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 87.6 bits (218), Expect = 9e-22
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               ++D++D  EI  L       +G +D+L  NAG+         ++   +R   VN  
Sbjct: 56  VHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTK 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                V+   P +     G IV  SS+A       +S Y ASK  +
Sbjct: 116 GAFFTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAAL 159

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 87.2 bits (217), Expect = 1e-21
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 7/109 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVAS---SSVLAHTDHEIERIMDV 82
           A+    DVSD    K + +  + + G +D L+NNA I        +L       ++ M V
Sbjct: 60  AISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           NL   +   R     M +   G IV  SS AA   +     Y  +K G+
Sbjct: 120 NLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGI 165

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 87.4 bits (217), Expect = 1e-21
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
              F    S + EIK +  +   K   VD  +  AG  +  +  +    + ++ ++D+NL
Sbjct: 61  DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNL 120

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            S           + +   G  V   + AAL     + AY A+K   
Sbjct: 121 YSAFASAHIGAKLLNQG--GLFVLTGASAALNRTSGMIAYGATKAAT 165

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 87.2 bits (217), Expect = 1e-21
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + DV+ +A +     + +  +G  D+L  NAG+      +  TD E +   DVN  
Sbjct: 60  GFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNAR 119

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +      L +NT G IV  +S+AA   A  ++ Y ASK+ V
Sbjct: 120 GVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAV 166

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 87.2 bits (217), Expect = 1e-21
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  + +V+D+   + +    + + G + +L+NNAG             + E    +NL 
Sbjct: 63  AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGG-GGPKPFDMPMSDFEWAFKLNLF 121

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S  ++ +   P M +   G I+ ISS+A     V +++Y +SK  V
Sbjct: 122 SLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAV 167

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 87.3 bits (217), Expect = 2e-21
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 4/110 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
                 DV D  ++  L      +   +D+L+NNAG       L   T  +   I+  NL
Sbjct: 85  VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANL 144

Query: 85  MSNIKMVREFLPDMLENNT--GHIVCISSIAALTAAVNVSAYFASKYGVT 132
                  +     M       G I+   SI+A T   N + Y A+K+ +T
Sbjct: 145 TGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAIT 194

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 87.2 bits (217), Expect = 2e-21
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            + F+ DVS+  E+KKL      K G +D ++N AGI            E  ++++VNL 
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
               + RE    + E++   I+ I S+      + N+SAY ASK GV
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV 179

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 86.9 bits (216), Expect = 3e-21
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
            +    DV D+A +    +N+ +    +  LINNAG+   +      D +  + ++D N+
Sbjct: 71  VLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNI 130

Query: 85  MSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGVT 132
              +   R  LP ++ +  G  IV + S+A          Y  +K  V 
Sbjct: 131 KGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVE 179

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 86.4 bits (215), Expect = 3e-21
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 2/111 (1%)

Query: 23  KTHVAVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEI-ERIM 80
              + +    + +   + ++L   V  + G +D L++NA I+   + L     E   ++M
Sbjct: 64  PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVM 123

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            VN+ +   + R  LP +  +    I   SS        N  AY  SK+  
Sbjct: 124 HVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFAT 174

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 86.9 bits (216), Expect = 3e-21
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ERIMDVNL 84
           A+  +ADVSD+ +++    + V K G++DI++ NAGI    + +        +  + VNL
Sbjct: 79  AIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNL 138

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGV 131
                 +   +P + +   G IV +SSI           +AY A+K   
Sbjct: 139 RGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ 187

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 88.0 bits (218), Expect = 3e-21
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 15/141 (10%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    DV D+ +I     + ++K G +DIL+NNA  ++ ++ L      ++ +M+VN  
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTR 162

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVT--------ENH 135
                 +  +P + ++   HI+ IS    L         AY  +KYG++        E  
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK 222

Query: 136 PSIKCFSGYMLW-GTTVTTPL 155
             I   +   LW  T + T  
Sbjct: 223 GEIAVNA---LWPKTAIHTAA 240

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 85.7 bits (213), Expect = 5e-21
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + DV+D+  +     +    +G +DIL+NNAGI+    V      +  R++D NL+
Sbjct: 58  VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
             + M R  LP +L  + G +V +SSIA      N + Y A+K+GV 
Sbjct: 118 GLMYMTRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVN 163

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 85.3 bits (212), Expect = 6e-21
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
             Y +     + E  +L E V    G VD+L++N         +      +    ++   
Sbjct: 46  ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 105

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +    +V      M +  +GHI+ I+S         +S Y +++ G 
Sbjct: 106 IRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA 152

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 85.3 bits (212), Expect = 7e-21
 Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
                 DV++   ++        + G VDIL+  AGI ++       TD +  + +D+NL
Sbjct: 64  VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINL 123

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGV 131
               +  +     MLE   G IV I S++ L        +AY ASK GV
Sbjct: 124 NGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGV 172

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 85.3 bits (212), Expect = 8e-21
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV    D S +  I    +    +   +  +++NA    + +          R+  V+++
Sbjct: 73  AVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFTRMFSVHML 131

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   +     P +  +    IV IS       +    AY A+K G+
Sbjct: 132 APYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGL 177

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 85.0 bits (211), Expect = 2e-20
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+    D+ D   +     + V + G +DI +NNA  +   S+        + +  + + 
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVR 126

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVT 132
               + +  +P M   +  HI+ +S    L    +  + Y  +KYG+T
Sbjct: 127 GTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMT 174

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 84.6 bits (210), Expect = 2e-20
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 3/109 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  K D+ ++ +++      V   G +DIL+NNA  +     L       + +  VN  
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNAR 123

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV--NVSAYFASKYGVT 132
            +    +  LP +L+    HI+ ++   +L  A     + Y  +K G++
Sbjct: 124 GSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMS 172

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 83.1 bits (206), Expect = 2e-20
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
             D+++   IKK+     ++G VD +++  G    S +   T  +    +   L   I +
Sbjct: 40  TVDITNIDSIKKM---YEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINL 96

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           V   +  + +   G     + I      V  ++   +   V
Sbjct: 97  VLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAV 135

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 84.1 bits (209), Expect = 2e-20
 Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              +++D+S++ E+ KL +   ++ G VDI IN  G V    ++  ++ E + +  +N  
Sbjct: 65  VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNK 124

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +++    M  N  GHI+ I++          S Y  +K  V
Sbjct: 125 VAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYAGNKAPV 168

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 85.2 bits (211), Expect = 2e-20
 Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 33  DVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMV 91
           DV  +  + +  ++ + + G +D+LI+NAG +      A T  +   + D+N++S  ++ 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 92  REFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
           R  LP M     G ++ ISS ++       ++ YFA+K  +
Sbjct: 127 RAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAM 167

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 84.2 bits (209), Expect = 3e-20
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  KAD+    EI KL ++ V   G++DI ++N+G+V+   +   T+ E +R+  +N  
Sbjct: 70  AIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTR 129

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
               + RE    + E   G IV  SS  +   +V   S Y  SK  V
Sbjct: 130 GQFFVAREAYRHLTEG--GRIVLTSSNTSKDFSVPKHSLYSGSKGAV 174

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 83.8 bits (208), Expect = 4e-20
 Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                AD+S +A  ++L          +DIL+NNAG    +++ ++     E++M +N+ 
Sbjct: 79  CQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVT 138

Query: 86  SNIKMVREFLPDMLEN----NTGHIVCISSIAALTA-AVNVSAYFASKYGV 131
           S    +++ LP +  +    N   ++ I S+A ++A      AY  SK  +
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAAL 189

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 83.8 bits (208), Expect = 4e-20
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V  +AD+S  +E+  L ++ V   G +D +++N+G+      L  T    +++ ++N  
Sbjct: 73  GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 132

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
               + ++ L        G I+  SSIAA+   + N + Y  SK  V
Sbjct: 133 GQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAV 177

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 83.8 bits (208), Expect = 4e-20
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           AV    DV + A+I  + +   R+ G +D L+NNAGIV     +     E IER++ VN+
Sbjct: 78  AVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNV 137

Query: 85  MSNIKMVREFLPDMLENNT---GHIVCISSIAALTAAVNVSA-YFASKYGV 131
             +I    E +  M    +   G IV +SS+AA+  +      Y ASK  +
Sbjct: 138 TGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAI 188

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 83.4 bits (207), Expect = 4e-20
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADVSD A +++L        G VD+L+NNAGI+  +++    D   +R++ VNL 
Sbjct: 79  ALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLK 138

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +RE    +     G I+ +S+        +   Y A+K GV
Sbjct: 139 GTFNTLREAAQRLRVG--GRIINMSTSQVGLLHPSYGIYAAAKAGV 182

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 82.9 bits (206), Expect = 5e-20
 Identities = 21/107 (19%), Positives = 43/107 (40%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           AV    D+        +   +  +G + +L++ A +      L  +  E  R++ ++L  
Sbjct: 45  AVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDV 104

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVN--VSAYFASKYGV 131
              + +   P M E   G ++ I S+   TA     + AY  +K  +
Sbjct: 105 AFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 83.4 bits (207), Expect = 5e-20
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A  +K  V      +KL  + V   G +D  I NAG  A S +L  +      ++ V+L 
Sbjct: 75  AKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLN 134

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
                 +       E  TG +V  +S++      N     ++Y  +K G 
Sbjct: 135 GTFHCAKAVGHHFKERGTGSLVITASMSGHI--ANFPQEQTSYNVAKAGC 182

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 83.4 bits (207), Expect = 6e-20
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   KA+V    +I ++  E V+  G +DI+ +N+G+V+   V   T  E +R+  +N  
Sbjct: 81  AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 140

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGV 131
               + RE    +     G ++ + SI     AV   + Y  SK  +
Sbjct: 141 GQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYSGSKGAI 185

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 83.0 bits (206), Expect = 7e-20
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH-TDHEIERIMDVNL 84
           A+  KAD+++ AE++   +    K G +  L++ AG + +   +A   +    +++DVNL
Sbjct: 60  ALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNL 119

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGV 131
            S     +  LP M +   G IV  SS A          AY  SK  V
Sbjct: 120 TSLFLTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAV 165

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 82.2 bits (204), Expect = 1e-19
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 8/113 (7%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAG-IVASSSVLAHTDHEIERIMDVNL 84
           A +F AD++     ++L +E V K G +D+LINNAG +V    +    D   + +MD N+
Sbjct: 59  AAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANI 118

Query: 85  MSNIKMVREFLPDMLE-----NNTGHIVCISSIAALTA-AVNVSAYFASKYGV 131
            S +   +  LP +         T  ++   SIA  T        Y A+K  +
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFL 171

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 81.9 bits (203), Expect = 2e-19
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 10/114 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSS-------VLAHTDHEIE 77
            V    D S ++E++ L E V +   G +D+L+NNA     +                 +
Sbjct: 56  CVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD 115

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            I +V L  +          M+    G IV ISS  +L    NV  Y   K   
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV-PYGVGKAAC 168

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 81.9 bits (203), Expect = 2e-19
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 DV+   E+        +  G + IL+N+AG           D     ++D NL 
Sbjct: 75  VDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLT 134

Query: 86  SNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ RE L    M E   G IV I+S       +  + Y ASK+GV
Sbjct: 135 GVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV 182

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 81.4 bits (202), Expect = 2e-19
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + DV +  +I+K+  +   K G +DILINNA           + +    ++++ L 
Sbjct: 57  ILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLN 116

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +      +E    G+I+ + +  A  A   V    A+K GV
Sbjct: 117 GTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV 163

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 81.4 bits (202), Expect = 2e-19
 Identities = 9/104 (8%), Positives = 39/104 (37%), Gaps = 4/104 (3%)

Query: 32  ADVSDKAEIKKL-NENVRKIGYVDILINNAGI---VASSSVLAHTDHEIERIMDVNLMSN 87
                + + ++L +  ++    +D +++N  I   +    +   ++ +I ++ +   +  
Sbjct: 51  TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFP 110

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           I +++  +  +       ++ I+S            Y  ++   
Sbjct: 111 ILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAAT 154

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 81.8 bits (203), Expect = 2e-19
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  +AD  D   I++   E V  +G +DIL+N+AGI  S+ +   T  + + +M VN  
Sbjct: 83  AVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFR 142

Query: 86  SNIKMVREFLPDMLENNTGHIVCISS-IAALTAAVNVSAYFASKYGV 131
           +    +R     + +   G I+ I S +A L     +S Y ASK  +
Sbjct: 143 APFVAIRSASRHLGDG--GRIITIGSNLAELVPWPGISLYSASKAAL 187

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 81.5 bits (202), Expect = 3e-19
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSS----VLAHTDHEIERIMD 81
                ADV+  A   ++ +  + K G +DIL+NNAG     S      A +    +  ++
Sbjct: 60  VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 119

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
           +NL S I + ++ +P  L +  G IV ISSIA+ L A  +   Y  +K  +
Sbjct: 120 LNLRSVIALTKKAVP-HLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAI 169

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 81.4 bits (202), Expect = 3e-19
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  + DV+   +++ + ++   ++G +DI + NAGIV+  ++L     E +RI D N+ 
Sbjct: 83  ALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVT 142

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAV--NVSAYFASKYGV 131
                 +     M++    G I+  +S++     +   VS Y  SK  V
Sbjct: 143 GVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAV 191

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 81.1 bits (201), Expect = 4e-19
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASS--SVLAHTDHEIERIMDVN 83
            ++ +AD++D +  +   +  V + G +D L+NNAGI +      L       + I+ VN
Sbjct: 81  VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVN 140

Query: 84  LMSNIKMVREFLPDMLENNT---GHIVCISSIAALTAAVNVSAYFASKYGV 131
           L   +   +  L  ML ++      I+ I+S++A+  +     Y  SK G+
Sbjct: 141 LRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGL 191

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 80.7 bits (200), Expect = 5e-19
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + DV D+A + +     V + G +D+++ NAGI    + L           DV+ +
Sbjct: 73  AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL--PVQAFADAFDVDFV 130

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV-----------SAYFASKYGVT 132
             I  V   LP +       I+   S+A L AA              + Y  +K  V 
Sbjct: 131 GVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVD 186

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 80.7 bits (200), Expect = 6e-19
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V  +ADV D+  +       + ++G +DI++ NAGI      ++  D     ++DVNL 
Sbjct: 76  IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDVIDVNLT 131

Query: 86  SNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
                ++  +P +++    G IV ISS A L    +       Y A+K+GV
Sbjct: 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGV 182

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 80.0 bits (198), Expect = 9e-19
 Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +    DV     +    ++ +++ G +DILIN A         A + +  + +MD++  
Sbjct: 79  CLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTS 138

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + R        ++ G IV I++              ++K  V
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAV 184

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + DVSD+A+   L    V + G +D++  NAG+   + +   T  ++  I  VN+ 
Sbjct: 62  VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVN 121

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSI-AALTAAVNVSAYFASKYGV 131
                V+  L  ++ + +G +V  SSI   +T     S Y A+K   
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQ 168

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
           +  +K ++SD   +++  ++  +  G +D+ + NAG+  +              +I+ V+
Sbjct: 85  SKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVD 144

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV----SAYFASKYGV 131
           L               +N  G ++  SSI+     VN+    + Y  +K   
Sbjct: 145 LNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI--VNIPQLQAPYNTAKAAC 194

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 79.6 bits (197), Expect = 2e-18
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEI----ERIMD 81
                ADV+ +    ++ N  +++ G +D+L+NNAG     +       +      + + 
Sbjct: 60  VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
           +NL + I+M ++  P ++ +  G IV +SSI A   A  +   Y  +K  +
Sbjct: 120 LNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAAL 169

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL----AHTDHEIERIMDV 82
           A +  ADV+D+A +    +    +G + I++N AG   +  VL      +     +I+D+
Sbjct: 54  ARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113

Query: 83  NLMSNIKMVREFLPDMLENNT--------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           NL+ +  ++R     + +           G I+  +S+AA    +  +AY ASK GV
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGV 170

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 78.4 bits (194), Expect = 2e-18
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL----AHTDHEIERIMDV 82
            +Y + DV+ + ++++     ++   +  +++ AG+  +  +L     H      R+++V
Sbjct: 41  LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEV 100

Query: 83  NLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           NL+    ++R     M EN        G IV  +S+AA    +  +AY ASK GV
Sbjct: 101 NLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGV 155

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 78.8 bits (195), Expect = 4e-18
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
                ADV++ +    + N  + K G +DIL+NNAG   +             ++   +N
Sbjct: 80  INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 139

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGV 131
             + I+M ++    +++   G IV +SSI A   A      Y  +K  +
Sbjct: 140 FQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAAL 187

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 78.0 bits (193), Expect = 4e-18
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 9/112 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-------GYVDILINNAGIVASSSVLAHTDHEIERI 79
           A    A++     ++ L  ++             DILINNAGI   + +   T+   +R+
Sbjct: 59  AFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRM 118

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + VN  +   ++++ L  +   +   I+ ISS A   +  +  AY  +K  +
Sbjct: 119 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAI 168

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 77.1 bits (191), Expect = 7e-18
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A    AD+SD   +K L   ++   G +DIL+NNA IV   +          +I+DVNL 
Sbjct: 54  ARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLT 113

Query: 86  SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + R     M      G ++ I+S        N++AY A+K GV
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV 160

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 77.0 bits (190), Expect = 9e-18
 Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 3/101 (2%)

Query: 32  ADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNIKM 90
           +      ++      +     VD ++  AG  A  +  + +  +  + +   ++ ++   
Sbjct: 56  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                  + E   G +    + AAL     +  Y  +K  V
Sbjct: 116 SHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAV 154

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 76.8 bits (190), Expect = 1e-17
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+   ADVSD   ++ +  E + + G +  + + AG+  S+          E+++ VNL 
Sbjct: 54  AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +  + R+    + E   G +V   S+A L A   ++ Y A K GV
Sbjct: 114 GSFLVARKAGEVLEEG--GSLVLTGSVAGLGAF-GLAHYAAGKLGV 156

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + DVSD          V    G +D++  NAGI   + +   T  ++  ++DVN+ 
Sbjct: 93  VIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVK 152

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGV 131
             +  V+  L  +  +  G ++  SSI           S Y ASK   
Sbjct: 153 GTVYTVQACLAPLTASGRGRVILTSSITGPVTG-YPGWSHYGASKAAQ 199

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + DV D   ++   +E ++  G+ +I+INNA     S     + +  + I D+ L 
Sbjct: 78  VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLN 137

Query: 86  SNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGV 131
               +  E    +++       + I++I A T +  V    ++K GV
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV 184

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 75.3 bits (186), Expect = 4e-17
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              Y   D+    +         K+  VDIL+ NAG   +      T+ + +  +D   +
Sbjct: 60  GHRYVVCDLRKDLD-----LLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFL 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           + IK+VR +LP M E   G IV I+S + ++   N+    +++  +T
Sbjct: 115 NMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALT 161

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 75.4 bits (186), Expect = 6e-17
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV    EI+ L   V +  G VD+L+NNAG     +     D     +++ NL 
Sbjct: 73  ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT 132

Query: 86  SNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 133 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 180

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 75.0 bits (185), Expect = 8e-17
 Identities = 18/117 (15%), Positives = 41/117 (35%), Gaps = 12/117 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVL-----AHTDHEIERIM 80
           A +   +V+ +  +    E   ++      ++ + G   +  ++             + +
Sbjct: 78  AEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTI 137

Query: 81  DVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           D+ L     + R     +           G +V  +SIA     +  +AY A+K GV
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGV 194

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 74.3 bits (183), Expect = 8e-17
 Identities = 14/109 (12%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDV 82
            +    + +   + + + E          VD +   AG  A  S  +    +  + ++  
Sbjct: 44  NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQ 103

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++ S+    +     +     G +    + AA+    ++  Y  +K  V
Sbjct: 104 SVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAV 150

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 75.0 bits (185), Expect = 1e-16
 Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + ++ ++ E+  L    +   G ++ L+NN G    S     +      +++ NL 
Sbjct: 74  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               M +      ++ + G IV I                A++ GV
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGV 178

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVL----AHTDHEIERIMD 81
             +  ADV+++A+        + + G+V  L+N AG      +L     H      R + 
Sbjct: 55  VRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114

Query: 82  VNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           VNL+    M+R     M +         G IV  +SIAA    +  +AY ASK GV
Sbjct: 115 VNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGV 170

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 74.2 bits (183), Expect = 1e-16
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 21/126 (16%)

Query: 27  AVYFKADVSDKAEIKKLNEN-----VRKIGYVDILINNAGI-----------VASSSVLA 70
           AV  K D+S  + +    E+      R  G  D+L+NNA                ++   
Sbjct: 64  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123

Query: 71  HTDHEIERIMDVNLMSNIKMVREFLPDMLE-----NNTGHIVCISSIAALTAAVNVSAYF 125
             D ++  +   N ++ + ++R F     E     +    +V +              Y 
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183

Query: 126 ASKYGV 131
            +K+ +
Sbjct: 184 MAKHAL 189

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 74.1 bits (183), Expect = 1e-16
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + +V D    K+  + V+  +G +D+L+NNAGI         T  + + ++D NL 
Sbjct: 65  FYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLT 124

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + ++ +  M+E   G I+ ISS+         + Y  +K G+
Sbjct: 125 SLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGI 170

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 13/118 (11%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVL------AHTDHEIERI 79
            V+  ADV+ + +++      + K G VD+ +N AGI  +S          HT  + +R+
Sbjct: 60  CVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV 119

Query: 80  MDVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKYGV 131
           +DVNLM    ++R    +M +N        G I+  +S+AA    V  +AY ASK G+
Sbjct: 120 LDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              +  DV+D    ++  E V    G VD+LINNAGI   ++ +  T  + + +M  +L 
Sbjct: 77  FKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLD 136

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   + ++F+  M+E   G IV I S+     A   + Y ++K G+
Sbjct: 137 AMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI 182

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 73.3 bits (181), Expect = 2e-16
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV+D A +++        +G +D +++ AGI   +        + E ++ VNL 
Sbjct: 51  AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT 110

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGV 131
            +  + +     M E N G IV  +S   L      N   Y AS  GV
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQAN---YAASMAGV 155

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 73.4 bits (181), Expect = 3e-16
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              ++ DVS+   + K   +    +G +  LI NAG+         T  +   + DVN+ 
Sbjct: 66  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVF 125

Query: 86  SNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNV-------SAYFASKYGV 131
                 R      L+    G IV  SS+++     +          Y +SK   
Sbjct: 126 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAAC 179

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 +V++   I+ + + +    G VDIL+NNAGI   + ++   + E   IM+ NL 
Sbjct: 57  GKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLT 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S  ++ +  L  M++   G I+ + S+         + Y A+K GV
Sbjct: 117 SIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGV 162

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V  K DV +  +++ + +      G +DIL+NNAGI   + +L  ++ + + +++ NL 
Sbjct: 57  VVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLK 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S     +     ML+  +G I+ I+SIA +      + Y ASK G+
Sbjct: 117 SAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGL 162

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 72.5 bits (179), Expect = 3e-16
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     ++SD   I+     ++     +DIL+NNAGI   + ++  ++ E + +++ NL 
Sbjct: 56  ARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLS 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S  +M +E +  M++   G I+ I S+         + Y A+K GV
Sbjct: 116 SIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGV 161

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 72.6 bits (179), Expect = 4e-16
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              F A++SD+  IK+L E   + +  +DIL+NNAGI      +   D + + ++ VNL 
Sbjct: 75  VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLT 134

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +   + RE +  M+    G I+ I+SI  +      + Y A+K G+
Sbjct: 135 AASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGL 180

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 72.6 bits (179), Expect = 4e-16
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 +V+D   +  L E+  K  G +++L+NNAGI      +   D E + ++D NL 
Sbjct: 79  GRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLK 138

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  ++ R  L  M++   G IV I+S+           Y A+K GV
Sbjct: 139 AVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 72.1 bits (178), Expect = 5e-16
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+ F  DVS +A+++ + +      G +D+++NNAGI   + ++     + + ++D+NL 
Sbjct: 53  AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +     M++   G I+ I+S+  L   +  + Y A+K GV
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV 158

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 72.6 bits (179), Expect = 6e-16
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   KADVS ++E++ L   V +  G +D+L+NNAGI   + +L     + + ++D+NL 
Sbjct: 80  AFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLG 139

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 R     ML+  +G I+ I+S+         + Y A+K GV
Sbjct: 140 GVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGV 185

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 72.2 bits (178), Expect = 6e-16
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 3/105 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 ++++K E   L   + K   +DIL+ NAGI + +  +   D + ++++D+NL +
Sbjct: 62  YTIEVCNLANKEECSNL---ISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKA 118

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           N  + RE +  M++   G I+ ISSI  +      + Y ASK G+
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGL 163

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 72.1 bits (178), Expect = 6e-16
 Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  +ADV++  ++  + +      G VDIL+NNAG+   + ++   + E + +++ NL 
Sbjct: 56  AIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLK 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 +     M+    G IV I+S+  +T     + Y A+K GV
Sbjct: 116 GVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGV 161

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 71.4 bits (176), Expect = 9e-16
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +   +A+V+D  E+K + + V    G +D+L+NNAGI   + ++   + E + ++D NL 
Sbjct: 56  SFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLK 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                +++  P ML   +G I+ +SS+         + Y A+K GV
Sbjct: 116 GVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGV 161

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
           AV    D+SD++  + L ++    +G +DIL   AG   A   +   T  + ++   VN+
Sbjct: 102 AVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNV 161

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +   + +E +P + +     I+  SSI A   + ++  Y A+K  + 
Sbjct: 162 FALFWITQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAATKAAIL 207

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + DV+D   + +    V +  G V++L++NAG+ A + ++  T+ + E++++ NL 
Sbjct: 55  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 114

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ +     M  N  G ++ I S++ L    N + Y ASK GV
Sbjct: 115 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV 160

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 71.5 bits (176), Expect = 2e-15
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +  +  DVS K EI ++   +      VDIL+NNAGI   +  L   + E E ++  NL 
Sbjct: 95  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN 154

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + +     M+ N  G I+ ISSI  LT  V  + Y +SK GV
Sbjct: 155 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 200

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  K D++D  ++++  + + +  G V++LI NAG+     ++  ++ +   +++ NL 
Sbjct: 61  FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLT 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++V+     ML    G +V ISS+  L  +   + Y ASK G+
Sbjct: 121 GTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGL 166

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + ++  +  I K  E +   +  +DIL+NNAGI      L  +  + E ++ VNL 
Sbjct: 59  AHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLT 118

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +  L  M++   G IV ISS+   T  V    Y  +K G+
Sbjct: 119 GTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGL 164

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 71.7 bits (176), Expect = 3e-15
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           A   + DV+  +E   +   + K G +DIL+NNAGI+   S    +  E + +  V+L+ 
Sbjct: 371 AWPDQHDVAKDSE-AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIG 429

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              + R   P  +E   G I+ I+S + +      + Y +SK G+
Sbjct: 430 TFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGI 474

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 70.9 bits (174), Expect = 5e-15
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           AV    +V D  +I  +   V+  G V ++INNAGI+  +S+   T+ + + ++DV+L  
Sbjct: 68  AVADYNNVLDGDKI--VETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNG 125

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              + +   P   +   G IV  SS A L      + Y ++K  +
Sbjct: 126 AFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSAL 170

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 69.5 bits (171), Expect = 6e-15
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
             + +ADV+ K ++ K+ E      G +D LINNAG             + E   ++  N
Sbjct: 59  LQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGN 118

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCIS--SIAALTAAVNVSAYFASKYGV 131
           L +   +++  +P M + N G I+        +    +  SA+ A+K G+
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGL 168

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 70.0 bits (172), Expect = 6e-15
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 27  AVYFKADVSD----KAEIKKL-NENVRKIGYVDILINNAGI----------VASSSVLAH 71
           AV  +AD+++     A  +++ N   R  G  D+L+NNA               +S    
Sbjct: 76  AVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKT 135

Query: 72  TDHEIERIMDVNLMSNIKMVREFLPDM------LENNTGHIVCISSIAALTAAVNVSAYF 125
            + ++  ++  N ++   +   F            ++   IV +         +  S Y 
Sbjct: 136 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 195

Query: 126 ASKYGV 131
             K+ +
Sbjct: 196 MGKHAL 201

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 70.1 bits (172), Expect = 6e-15
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 26  VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           VA Y    V    ++  +   +   G +D+++NNAGI+   S    +D + + I  V+L 
Sbjct: 70  VANY--DSVEAGEKL--VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 125

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            + ++ R     M + N G I+  +S + +      + Y A+K G+
Sbjct: 126 GSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGL 171

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 69.5 bits (171), Expect = 7e-15
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
              F+ADVS+    + L E V+        ++++ AGI     +L  ++ + ++++ VNL
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNL 124

Query: 85  MSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                + +     ++ N   G I+ ISSI      V  + Y ASK GV
Sbjct: 125 KGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGV 172

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 70.2 bits (172), Expect = 9e-15
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
           AV     V D A++  +   ++  G VDIL+NNAGI+   S++  ++ +   + DV+L  
Sbjct: 79  AVADYNSVIDGAKV--IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG 136

Query: 87  NIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + K  +   P M + N G I+  SS + +        Y A+K G+
Sbjct: 137 SFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGL 181

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 68.7 bits (169), Expect = 9e-15
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 30  FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
             A++ +      L     + +G +D L+NNAGI   + ++   D + E +++ NL +  
Sbjct: 57  LGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVF 116

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +  RE +  M++   G IV I+S+  +      + Y ASK G+
Sbjct: 117 RTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 68.5 bits (168), Expect = 4e-14
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 30  FKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSN 87
              DV+    + K+  +V +   G VDIL+NNAGI     +    +   + ++ VNL++ 
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAP 323

Query: 88  IKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGV 131
            ++    + +      G ++ +SS+A +    N   + Y  +K G+
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSSMAGIAG--NRGQTNYATTKAGM 367

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 65.3 bits (160), Expect = 3e-13
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGI-VASSSVLAHTDHEIERIMDVNL 84
            V    D+SD+   K +  E VR++G ++IL+NN         +   T  ++E+   +N+
Sbjct: 99  CVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINI 158

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            S   + +  L  + +     I+  +SI A      +  Y A+K  + 
Sbjct: 159 FSYFHVTKAALSHLKQG--DVIINTASIVAYEGNETLIDYSATKGAIV 204

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 3/84 (3%)

Query: 51  GYVDILINNAGIVASSSVLAH--TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC 108
             + + +N  G+ A    LA   +  +    + V  ++  +     LP +     G    
Sbjct: 79  SGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEAR 138

Query: 109 ISSIAALTAAVNVSAYFASKYGVT 132
              +A      +  AY  SKY VT
Sbjct: 139 AIELAEQQGQTH-LAYAGSKYAVT 161

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 64.3 bits (157), Expect = 5e-13
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             + + D+ D   I+ L + +R + G +D+L+NNAGI    +       + E  M  N  
Sbjct: 56  PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFF 115

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
               +  E LP +     G +V +SSI ++ A  + S     K+
Sbjct: 116 GTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKF 157

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 18/117 (15%)

Query: 30  FKADVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLM 85
            + D+ +     KL  ++  +     +++L NNAGI   S+ +     + +   +  N +
Sbjct: 77  LEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTV 136

Query: 86  SNIKMVREFLP-----------DMLENNTGHIVCISSIA---ALTAAVNVSAYFASK 128
             I + +  LP             +      I+ +SSI           + AY  SK
Sbjct: 137 VPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 38/143 (26%)

Query: 27  AVYFKADVSDKAEIKKLNEN------------------VRKIGYVDILINNAGIV----- 63
           A+  +AD+S+ A       +                      G  D+L+NNA        
Sbjct: 62  AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL 121

Query: 64  ---------ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVC 108
                             +     +   N ++   +++ F   +             I+ 
Sbjct: 122 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 181

Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           +         +  + Y  +K  +
Sbjct: 182 MVDAMTNQPLLGYTIYTMAKGAL 204

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 38/143 (26%)

Query: 27  AVYFKADVSDKAEIKKLNEN------------------VRKIGYVDILINNAGIV----- 63
           A+  +AD+S+ A       +                      G  D+L+NNA        
Sbjct: 99  AITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPL 158

Query: 64  ---------ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVC 108
                             +     +   N ++   +++ F   +             I+ 
Sbjct: 159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 218

Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
           +         +  + Y  +K  +
Sbjct: 219 MVDAMTNQPLLGYTIYTMAKGAL 241

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 62.0 bits (151), Expect = 4e-12
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 37/131 (28%)

Query: 32  ADVSDKAEIKKLNENV--RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           AD+S     K+   +V  +    +D L+  AG+   + VL         ++ VN     +
Sbjct: 40  ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL-------GNVVSVNYFGATE 92

Query: 90  MVREFLPDMLENNTGHIVCISSIAALTAAVNV---------------------------- 121
           ++  FLP + + +    V ISS+A+   A +                             
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 122 SAYFASKYGVT 132
            AY  SK  +T
Sbjct: 153 LAYAGSKNALT 163

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 61.2 bits (149), Expect = 9e-12
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV   ++V+D  +   L    V   G +D+L+NNAGIV    +   ++ E + ++ V+L 
Sbjct: 88  AVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147

Query: 86  SNIKMVREFLPDM------LENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            +   +R             +   G I+  SS A L  +V    Y A+K G+
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGI 199

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 22/118 (18%)

Query: 33  DVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDVNLMSNI 88
            V+    +      V +I     + +LINNAG++ S       +   I   +DVN  S +
Sbjct: 59  TVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVV 118

Query: 89  KMVREFLP-----------DMLENNTGHIVCISSIAA-------LTAAVNVSAYFASK 128
            + ++ LP           D L  +   ++ ISS           +A   V AY  SK
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSK 176

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 49.6 bits (118), Expect = 9e-08
 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 32/134 (23%)

Query: 27  AVYFKADVSDKAE-IKKLNENVR-KIGYVDILINNAGIVASS------------------ 66
            V+ + DV+D    +  L + ++   G +DIL+NNAG+   S                  
Sbjct: 64  VVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSE 123

Query: 67  ------------SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA 114
                        +++ T    E  + +N      +    +P +  +++  IV +SS   
Sbjct: 124 ELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTG 183

Query: 115 LTAAVNVSAYFASK 128
               V+        
Sbjct: 184 SLKYVSNETALEIL 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.98
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.97
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.97
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.97
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.97
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.96
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.96
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.96
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.96
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.96
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.96
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.96
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.96
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.96
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.96
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.96
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.96
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.96
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.96
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.96
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.96
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.96
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.96
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.96
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.96
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.96
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.96
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.96
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.96
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.96
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.96
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.96
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.96
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.96
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.95
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.95
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.95
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.95
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.95
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.95
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.95
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.95
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.95
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.95
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.95
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.95
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.95
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.95
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.95
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.95
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.95
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.95
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.95
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.95
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.95
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.95
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.95
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.95
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.95
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.95
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.95
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.95
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.94
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.94
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.94
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.94
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.94
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.94
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.94
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.94
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.94
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.94
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.93
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.93
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.93
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.93
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.93
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.93
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.93
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.93
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.93
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.93
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.92
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.92
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.92
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.92
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.92
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.92
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.92
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.91
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.91
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.91
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.91
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.91
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.9
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.9
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.9
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.89
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.88
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.88
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.88
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.87
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.87
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.87
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.86
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.84
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.82
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.81
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.81
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.8
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.8
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.79
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.75
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.73
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.71
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.71
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.63
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.58
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.58
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.55
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.55
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.54
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.53
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.53
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.51
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.51
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.5
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.5
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.5
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.5
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.48
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.46
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.46
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.45
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.45
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.45
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.45
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.45
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.44
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.44
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.43
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.43
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.43
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.42
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.41
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.41
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.41
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.4
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.4
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.38
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.38
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.38
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.37
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.37
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.36
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.36
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.35
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.34
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.34
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.34
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.3
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.3
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.28
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.27
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.27
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.25
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.25
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.25
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.25
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.24
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.23
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.23
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.23
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.2
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.2
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.19
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.18
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.16
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.16
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.14
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.13
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.1
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.06
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.0
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.99
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	98.89
4f6l_B	508	AUSA reductase domain protein; thioester reductase	98.88
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.71
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.7
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	98.68
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.61
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	98.58
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.51
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.4
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.31
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.25
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.19
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.16
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.07
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.03
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.03
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.87
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	96.96
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	96.73
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.3
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	94.7
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	88.28
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	82.49
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	81.75
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	81.06

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=8e-35  Score=215.22  Aligned_cols=161  Identities=25%  Similarity=0.259  Sum_probs=143.6

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.|...+..          +...+.++.+++||++|+++++++++.+.+ ||+||+||||||... ..++.++
T Consensus        25 ~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~  104 (254)
T 4fn4_A           25 KKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEV  104 (254)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGC
T ss_pred             HHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhC
Confidence            4677888888877633          234578899999999999999999999999 999999999999875 4779999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++...|+++|+|+.+|+|+||.|+++.++.++.
T Consensus       105 ~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~  184 (254)
T 4fn4_A          105 SDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVA  184 (254)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999977666666


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      ++|++..|++...
T Consensus       185 V~PG~i~T~~~~~  197 (254)
T 4fn4_A          185 VLPGTVKTNIGLG  197 (254)
T ss_dssp             EEECSBCSSCTTS
T ss_pred             EEeCCCCCccccc
Confidence            6888888876544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.2e-34  Score=212.11  Aligned_cols=161  Identities=22%  Similarity=0.183  Sum_probs=144.8

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|.+.+...          ...+.++.+++||++|+++++++++.+.+ ||+||+||||||.....++.+.+
T Consensus        27 ~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~  106 (255)
T 4g81_D           27 EGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELE  106 (255)
T ss_dssp             HHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCC
Confidence            56788899988876432          23567899999999999999999999999 99999999999999889999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|++++++|+.++++++|+++|+|.++ ++|+||++||.++..+.+....|+++|+++.+|+|++|.|+++.++.++.
T Consensus       107 ~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~  186 (255)
T 4g81_D          107 LENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNA  186 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999765 57999999999999999999999999999999999999999977666666


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      ++|++..|++...
T Consensus       187 V~PG~i~T~~~~~  199 (255)
T 4g81_D          187 IGPGYILTDMNTA  199 (255)
T ss_dssp             EEECSBCCGGGHH
T ss_pred             EeeCCCCCchhhc
Confidence            6899888887654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.4e-32  Score=202.46  Aligned_cols=159  Identities=21%  Similarity=0.210  Sum_probs=140.0

Q ss_pred             cccccccccceeccCCC------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCL------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.+.|+.|...+...      ...+.++.+++||++|+++++++++.+.+ ||+||+||||||.....++.+.+.++|
T Consensus        20 ~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~   99 (247)
T 3ged_A           20 LDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEF   99 (247)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH
Confidence            56788899988876432      24466889999999999999999999999 999999999999998899999999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +.++++|+.++++++|++.|+|.+++ |+||++||..+..+.+....|++||+++.+|+|+||.|+++ .+.++.++|++
T Consensus       100 ~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~  177 (247)
T 3ged_A          100 DYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGW  177 (247)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECS
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCc
Confidence            99999999999999999999998764 99999999999999999999999999999999999999996 45666668888


Q ss_pred             cccccccc
Q psy5462         157 SVTILYQR  164 (182)
Q Consensus       157 ~~~~~~~~  164 (182)
                      ..|+..+.
T Consensus       178 i~t~~~~~  185 (247)
T 3ged_A          178 INVTEQQE  185 (247)
T ss_dssp             BCCCC---
T ss_pred             CCCCCcHH
Confidence            77765543

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.98  E-value=4.9e-32  Score=201.54  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=143.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|...++...+...+..+++||++|+++++++++.+.+ ||++|+||||||...  .+++.+++.++|+..+
T Consensus        29 ~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~  108 (261)
T 4h15_A           29 SLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNEL  108 (261)
T ss_dssp             HHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHH
T ss_pred             HHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHH
Confidence            5688899999999887666666777899999999999999999999 999999999999754  3578999999999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-CCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      ++|+.++++++|+++|+|++++.|+||++||..+..+.+ ....|+++|+|+.+|+|+||.|+++.++.++.++|++..|
T Consensus       109 ~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T  188 (261)
T 4h15_A          109 SLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIET  188 (261)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCC
Confidence            999999999999999999999999999999999988876 5789999999999999999999997766666668888888


Q ss_pred             ccccc
Q psy5462         160 ILYQR  164 (182)
Q Consensus       160 ~~~~~  164 (182)
                      ++...
T Consensus       189 ~~~~~  193 (261)
T 4h15_A          189 EASVR  193 (261)
T ss_dssp             HHHHH
T ss_pred             cchhh
Confidence            76543

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.97  E-value=5e-32  Score=202.09  Aligned_cols=159  Identities=21%  Similarity=0.130  Sum_probs=138.6

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.+.|+.|.+.++..       .+.+.++..++||++|+++++++++.+.+ ||+||+||||||.....++.+.+.++
T Consensus        47 ~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~  126 (273)
T 4fgs_A           47 KRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQ  126 (273)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHH
Confidence            46778899888876433       23367889999999999999999999999 99999999999998889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.++++++|+++|+|++  .|+||++||..+..+.+....|+++|+|+.+|+|+||.|+++.++.++.++|+
T Consensus       127 w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG  204 (273)
T 4fgs_A          127 YDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPG  204 (273)
T ss_dssp             HHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEEC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            9999999999999999999999965  48999999999999999999999999999999999999999876666666888


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|+....
T Consensus       205 ~i~T~~~~~  213 (273)
T 4fgs_A          205 PTETTGLVE  213 (273)
T ss_dssp             SBCC-----
T ss_pred             CCCChhHHH
Confidence            888876543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.97  E-value=2.6e-31  Score=197.13  Aligned_cols=159  Identities=23%  Similarity=0.225  Sum_probs=138.9

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.+.|+.+.+.++..+         ..+.++.++.||++|+++++++++.+.+ ||+||+||||||...... .+.+.
T Consensus        25 ~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~-~~~~~  103 (258)
T 4gkb_A           25 MRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG-LDAGR  103 (258)
T ss_dssp             HHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC-TTSCH
T ss_pred             HHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-ccCCH
Confidence            467788998888775543         2357899999999999999999999999 999999999999875444 47899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.++++++|+++|+|+++ +|+||++||.++..+.+....|+++|+|+.+|+|++|.|+++.++.++.++
T Consensus       104 e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~  182 (258)
T 4gkb_A          104 DAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVI  182 (258)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEe
Confidence            9999999999999999999999999765 499999999999999999999999999999999999999998766777779


Q ss_pred             CCccccccccc
Q psy5462         154 PLRSVTILYQR  164 (182)
Q Consensus       154 ~~~~~~~~~~~  164 (182)
                      |++..|++...
T Consensus       183 PG~i~T~~~~~  193 (258)
T 4gkb_A          183 PAEVMTPLYRN  193 (258)
T ss_dssp             ECSBCCSCC--
T ss_pred             cCCCCChhHhh
Confidence            99888887654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.97  E-value=3.6e-31  Score=193.91  Aligned_cols=156  Identities=19%  Similarity=0.162  Sum_probs=132.8

Q ss_pred             cccccccccceeccCCCC----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.+.|+.|.+.+...+    ..+.++..+.||++|++++++++++   ||++|+||||||...  ++.+++.++|+++
T Consensus        29 ~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---~g~iDiLVNNAGi~~--~~~~~~~~~w~~~  103 (242)
T 4b79_A           29 MQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEA---LPRLDVLVNNAGISR--DREEYDLATFERV  103 (242)
T ss_dssp             HHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHH---CSCCSEEEECCCCCC--GGGGGSHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHh---cCCCCEEEECCCCCC--CcccCCHHHHHHH
Confidence            567888999988875443    3457899999999999999888754   699999999999854  5678899999999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      +++|+.++++++|++.|+|+++ +|+||++||..+..+.++...|++||+++.+|+|+||.|+++.++.++.++|++..|
T Consensus       104 ~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T  182 (242)
T 4b79_A          104 LRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDT  182 (242)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred             HHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCC
Confidence            9999999999999999999765 599999999999999999999999999999999999999997766666668998888


Q ss_pred             cccccc
Q psy5462         160 ILYQRS  165 (182)
Q Consensus       160 ~~~~~~  165 (182)
                      ++....
T Consensus       183 ~m~~~~  188 (242)
T 4b79_A          183 PLGAGL  188 (242)
T ss_dssp             C-----
T ss_pred             hhhhcc
Confidence            876553

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.97  E-value=7.3e-32  Score=197.98  Aligned_cols=157  Identities=20%  Similarity=0.209  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCCC--------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP--------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|.+.++...        ..+.++..+.||++|+++++.+++    ++++|+||||||.....++.+++.++
T Consensus        27 ~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----~g~iDiLVNNAGi~~~~~~~~~~~~~  102 (247)
T 4hp8_A           27 VGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT----DAGFDILVNNAGIIRRADSVEFSELD  102 (247)
T ss_dssp             HHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST----TTCCCEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH----hCCCCEEEECCCCCCCCCcccccHHH
Confidence            567888999988875432        356789999999999998877654    48999999999999889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+....|++||+++.+|+|++|.|+++.++.++.++|
T Consensus       103 w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P  182 (247)
T 4hp8_A          103 WDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAP  182 (247)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee
Confidence            999999999999999999999998775 6999999999999999999999999999999999999999977666666689


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..|++.+.
T Consensus       183 G~i~T~~~~~  192 (247)
T 4hp8_A          183 GYIETNNTEA  192 (247)
T ss_dssp             CSBCSGGGHH
T ss_pred             CCCCCcchhh
Confidence            9888887654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.96  E-value=3e-29  Score=186.61  Aligned_cols=162  Identities=19%  Similarity=0.133  Sum_probs=143.9

Q ss_pred             cccccccccceec-cCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFI-PWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+... .+.          +...+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.
T Consensus        22 ~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  101 (258)
T 3oid_A           22 IRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMEL  101 (258)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGC
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            5677889888775 322          123467899999999999999999999999 9999999999998888888999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.++.
T Consensus       102 ~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~  181 (258)
T 3oid_A          102 EETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNA  181 (258)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            99999999999999999999999999999888999999999999999999999999999999999999999876667777


Q ss_pred             eCCCcccccccccc
Q psy5462         152 TTPLRSVTILYQRS  165 (182)
Q Consensus       152 ~~~~~~~~~~~~~~  165 (182)
                      .+|++..|++....
T Consensus       182 v~PG~v~T~~~~~~  195 (258)
T 3oid_A          182 VSGGAIDTDALKHF  195 (258)
T ss_dssp             EEECCBCSGGGGGC
T ss_pred             EeeCCCcChhhhhc
Confidence            79998888876543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.96  E-value=2.4e-29  Score=189.23  Aligned_cols=160  Identities=21%  Similarity=0.249  Sum_probs=143.2

Q ss_pred             cccccccccceeccCCC----------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWCL----------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+.|...++..                      ...+.++.++.+|++|+++++++++.+.+ +|++|++||||
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA  107 (281)
T 3s55_A           28 VALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNA  107 (281)
T ss_dssp             HHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred             HHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            56778898888776531                      12356899999999999999999999999 99999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHh
Q psy5462          61 GIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        61 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      |.....++.+.+.++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|+++++|+++++.
T Consensus       108 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  187 (281)
T 3s55_A          108 GISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAH  187 (281)
T ss_dssp             CCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            99888888999999999999999999999999999999988889999999999999999999999999999999999999


Q ss_pred             hhCCCccceeeeCCCcccccccc
Q psy5462         141 FSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       141 e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      |+++.++.+++.+|++..|++..
T Consensus       188 e~~~~gi~vn~v~PG~v~t~~~~  210 (281)
T 3s55_A          188 DLVGYGITVNAVAPGNIETPMTH  210 (281)
T ss_dssp             HTGGGTEEEEEEEECSBCSTTTS
T ss_pred             HHhhcCcEEEEEecCcccCcccc
Confidence            99876667777789988887654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=6.1e-29  Score=186.94  Aligned_cols=161  Identities=25%  Similarity=0.328  Sum_probs=142.8

Q ss_pred             cccccccccceeccCC-----------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEc
Q psy5462           4 DRTTGHIHGILFIPWC-----------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINN   59 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~   59 (182)
                      ++|+++|+.|..++..                       +...+.++.++.+|++|+++++++++.+.+ +|++|+||||
T Consensus        33 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnn  112 (280)
T 3pgx_A           33 VRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVAN  112 (280)
T ss_dssp             HHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEEC
T ss_pred             HHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4677788888776541                       123467899999999999999999999999 9999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHH
Q psy5462          60 AGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        60 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ||.....++.+.+.++|+.++++|+.++++++++++|+|++++ .|+||++||..++.+.++...|+++|++++.|++++
T Consensus       113 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  192 (280)
T 3pgx_A          113 AGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTL  192 (280)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHH
Confidence            9998888889999999999999999999999999999998875 799999999999999999999999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.|+++.++.+++.+|++..|+....
T Consensus       193 a~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          193 AIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             HHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             HHHhhhcCeEEEEEeeCcccCcccch
Confidence            99999776777777999888877654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.96  E-value=2.3e-29  Score=187.00  Aligned_cols=159  Identities=19%  Similarity=0.180  Sum_probs=141.5

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...++..          ...+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++ +.+
T Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~-~~~  108 (256)
T 3gaf_A           30 GTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMP  108 (256)
T ss_dssp             HHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT-TCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCC
Confidence            46777888887776432          22367899999999999999999999999 9999999999999887777 889


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.++..
T Consensus       109 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v  188 (256)
T 3gaf_A          109 MSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAI  188 (256)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEE
Confidence            99999999999999999999999999998889999999999999999999999999999999999999999776677777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      +|++..|+...
T Consensus       189 ~PG~v~T~~~~  199 (256)
T 3gaf_A          189 APGAIKTDALA  199 (256)
T ss_dssp             EECCBCCHHHH
T ss_pred             EEccccCchhh
Confidence            89988887654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.96  E-value=2.6e-29  Score=185.89  Aligned_cols=161  Identities=19%  Similarity=0.207  Sum_probs=143.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++...       ..+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+.++
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~  106 (248)
T 3op4_A           27 ELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEE  106 (248)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence            467788998887764332       1234678899999999999999999999 99999999999998888889999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++.++.+++.+|+
T Consensus       107 ~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG  186 (248)
T 3op4_A          107 WSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPG  186 (248)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeC
Confidence            99999999999999999999999988889999999999999999999999999999999999999999776777777999


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|+....
T Consensus       187 ~v~T~~~~~  195 (248)
T 3op4_A          187 FIETDMTKA  195 (248)
T ss_dssp             SBSSTTTTT
T ss_pred             CCCCchhhh
Confidence            888877654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.96  E-value=4.6e-29  Score=186.25  Aligned_cols=161  Identities=20%  Similarity=0.176  Sum_probs=142.3

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|...++...            ..+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~  105 (265)
T 3lf2_A           26 ELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAE  105 (265)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTT
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence            467788988887764321            1233589999999999999999999999 999999999999988888999


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++.++.++
T Consensus       106 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  185 (265)
T 3lf2_A          106 TTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVN  185 (265)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            99999999999999999999999999999888899999999999999999999999999999999999999997766777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|+....
T Consensus       186 ~v~PG~v~t~~~~~  199 (265)
T 3lf2_A          186 GILIGLVESGQWRR  199 (265)
T ss_dssp             EEEECSBCCHHHHH
T ss_pred             EEEeCcCcCchhhh
Confidence            77898888876543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=3.6e-29  Score=184.92  Aligned_cols=161  Identities=21%  Similarity=0.238  Sum_probs=143.2

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+...+...           ...+.++.++.+|++|+++++++++.+.+ +|++|++|||||.....++.+.
T Consensus        22 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  101 (246)
T 3osu_A           22 LQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRM  101 (246)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            46778898887765321           23467899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|+++.++.+++
T Consensus       102 ~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~  181 (246)
T 3osu_A          102 KEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNA  181 (246)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999977667777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..++....
T Consensus       182 v~PG~v~t~~~~~  194 (246)
T 3osu_A          182 VAPGFIVSDMTDA  194 (246)
T ss_dssp             EEECSBGGGCCSC
T ss_pred             EEECCCcCCcccc
Confidence            7899888877654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.96  E-value=7.9e-29  Score=185.39  Aligned_cols=159  Identities=26%  Similarity=0.289  Sum_probs=143.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..++.........+..+.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++|+.++++
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v  111 (269)
T 3vtz_A           32 DALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDV  111 (269)
T ss_dssp             HHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence            4678889999888876655556788999999999999999999999 999999999999988888889999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++++++|+|++++.|+||++||..++.+.++...|+++|+++++|+++++.|+++ .+.+++.+|+++.|++.
T Consensus       112 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~  190 (269)
T 3vtz_A          112 NVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMV  190 (269)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHH
T ss_pred             hhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcch
Confidence            99999999999999999888899999999999999999999999999999999999999987 56777778998888765


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       191 ~  191 (269)
T 3vtz_A          191 I  191 (269)
T ss_dssp             H
T ss_pred             h
Confidence            3

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.96  E-value=2.9e-29  Score=187.91  Aligned_cols=161  Identities=24%  Similarity=0.185  Sum_probs=143.7

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|...++..          ...+.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.+
T Consensus        44 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~  123 (271)
T 4ibo_A           44 EGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELE  123 (271)
T ss_dssp             HHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCC
Confidence            46778888887776432          22366899999999999999999999999 99999999999998888899999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.++..
T Consensus       124 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  203 (271)
T 4ibo_A          124 TADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAI  203 (271)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEE
Confidence            99999999999999999999999999988889999999999999999999999999999999999999999776677777


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..|++...
T Consensus       204 ~PG~v~T~~~~~  215 (271)
T 4ibo_A          204 GPGYMLTDMNQA  215 (271)
T ss_dssp             EECSBCSGGGHH
T ss_pred             EeccEeCcchhh
Confidence            899888877654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.96  E-value=8.6e-29  Score=186.43  Aligned_cols=161  Identities=19%  Similarity=0.182  Sum_probs=141.8

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~   71 (182)
                      ++|.++|+.|..+++.          +...+.++.++.+|++|+++++++++.+.+ +|++|++|||||.... .++.+.
T Consensus        46 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~  125 (283)
T 3v8b_A           46 LALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDL  125 (283)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTS
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhC
Confidence            4677788888777633          234567899999999999999999999999 9999999999998754 778899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--ccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+..  +.++...|+++|+++++|+++++.|+++.++.+
T Consensus       126 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  205 (283)
T 3v8b_A          126 KPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRV  205 (283)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEE
Confidence            999999999999999999999999999988889999999999877  778899999999999999999999999776677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|++..|++...
T Consensus       206 n~v~PG~v~T~~~~~  220 (283)
T 3v8b_A          206 NAVCPGAIETNISDN  220 (283)
T ss_dssp             EEEEECSBSSCTTCC
T ss_pred             EEEEeCCCcCCcccc
Confidence            777899888877654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.96  E-value=6e-29  Score=186.68  Aligned_cols=161  Identities=22%  Similarity=0.222  Sum_probs=142.4

Q ss_pred             cccccccccceeccCC-----------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEc
Q psy5462           4 DRTTGHIHGILFIPWC-----------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINN   59 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~   59 (182)
                      ++|.++|+.|..++..                       +...+.++.++.+|++|+++++++++.+.+ +|++|+||||
T Consensus        29 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn  108 (277)
T 3tsc_A           29 VRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVAN  108 (277)
T ss_dssp             HHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             HHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4677888888876541                       112356799999999999999999999999 9999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHH
Q psy5462          60 AGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        60 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ||.....++.+.+.++|+..+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|+++|+++..|++++
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  188 (277)
T 3tsc_A          109 AGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAF  188 (277)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHH
Confidence            9998888889999999999999999999999999999999876 689999999999999999999999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.|+++.++.++..+|++..|++...
T Consensus       189 a~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          189 AAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             HHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             HHHhCccCeEEEEEEeCCCcCCcccc
Confidence            99999776677777999888887653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=1.1e-28  Score=183.89  Aligned_cols=161  Identities=18%  Similarity=0.143  Sum_probs=142.0

Q ss_pred             cccccccccceeccCCC----------CCCC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|...++..          ...+ .++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~  107 (262)
T 3pk0_A           28 TVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATM  107 (262)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhC
Confidence            46778888888776432          1223 6899999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|+++|++++.|+++++.|+++.++.++
T Consensus       108 ~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn  187 (262)
T 3pk0_A          108 TPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVN  187 (262)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence            99999999999999999999999999998888999999999886 78888999999999999999999999997767777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +.+|++..++....
T Consensus       188 ~v~PG~v~t~~~~~  201 (262)
T 3pk0_A          188 AIMPGNIMTEGLLE  201 (262)
T ss_dssp             EEEECSBCCHHHHT
T ss_pred             EEEeCcCcCccccc
Confidence            77899888876543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.96  E-value=2.3e-28  Score=182.63  Aligned_cols=161  Identities=22%  Similarity=0.280  Sum_probs=143.7

Q ss_pred             cccccccccceeccCCCC----CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP----TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.|..+++...    ....++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++|+.
T Consensus        34 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~  113 (266)
T 3p19_A           34 RRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQR  113 (266)
T ss_dssp             HHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence            467788998888764321    1234788999999999999999999999 99999999999998888889999999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++++|+.++++++++++|+|++++.|+||++||.+++.+.++...|+++|+++++|+++++.|++..++.+++.+|+++.
T Consensus       114 ~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (266)
T 3p19_A          114 MFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVK  193 (266)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccc
Confidence            99999999999999999999988889999999999999999999999999999999999999999776777777999888


Q ss_pred             cccccc
Q psy5462         159 TILYQR  164 (182)
Q Consensus       159 ~~~~~~  164 (182)
                      |+....
T Consensus       194 T~~~~~  199 (266)
T 3p19_A          194 TELLSH  199 (266)
T ss_dssp             SSGGGG
T ss_pred             cchhhc
Confidence            887654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.96  E-value=1.1e-28  Score=185.92  Aligned_cols=161  Identities=22%  Similarity=0.305  Sum_probs=141.1

Q ss_pred             cccccccccceeccCC--------------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEE
Q psy5462           4 DRTTGHIHGILFIPWC--------------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDIL   56 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~--------------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~l   56 (182)
                      ++|.++|+.|..++..                          +...+.++.++.||++|+++++++++.+.+ +|++|+|
T Consensus        29 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l  108 (286)
T 3uve_A           29 VRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDII  108 (286)
T ss_dssp             HHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             HHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4677788888776543                          113356899999999999999999999999 9999999


Q ss_pred             EEcccCCCCCC-cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHH
Q psy5462          57 INNAGIVASSS-VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTEN  134 (182)
Q Consensus        57 i~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~  134 (182)
                      |||||...... +.+.+.++|+.++++|+.++++++++++|+|++++ .|+||++||..++.+.++...|+++|+++.+|
T Consensus       109 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  188 (286)
T 3uve_A          109 VANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGL  188 (286)
T ss_dssp             EECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHHHHHHHH
Confidence            99999877654 88899999999999999999999999999998866 68999999999999999999999999999999


Q ss_pred             HHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         135 HPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       135 ~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +++++.|++..++.++..+|++..|++...
T Consensus       189 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          189 MRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             HHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            999999999776677777899888887653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.96  E-value=8.7e-29  Score=186.23  Aligned_cols=161  Identities=24%  Similarity=0.275  Sum_probs=140.5

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|+++|+.|...++...            ..+.++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+
T Consensus        43 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~  122 (281)
T 3v2h_A           43 RTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIED  122 (281)
T ss_dssp             HHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCccc
Confidence            567788998887765221            1267899999999999999999999999 999999999999988888899


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.++
T Consensus       123 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  202 (281)
T 3v2h_A          123 FPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVN  202 (281)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            99999999999999999999999999999988899999999999999999999999999999999999999997666777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +.+|++..|+....
T Consensus       203 ~v~PG~v~t~~~~~  216 (281)
T 3v2h_A          203 SICPGYVLTPLVEK  216 (281)
T ss_dssp             EEEECSBCC-----
T ss_pred             EEECCCCcCcchhh
Confidence            77899888876543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.96  E-value=6e-29  Score=186.02  Aligned_cols=161  Identities=22%  Similarity=0.187  Sum_probs=143.1

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|.+.....           ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        46 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  125 (269)
T 4dmm_A           46 LELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRM  125 (269)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            46778888887765421           12356899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||.++..+.++...|+++|+++++|+++++.|++..++.+++
T Consensus       126 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~  205 (269)
T 4dmm_A          126 KRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNA  205 (269)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999977677777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       206 v~PG~v~T~~~~~  218 (269)
T 4dmm_A          206 VAPGFIATDMTSE  218 (269)
T ss_dssp             EEECCBTTSCSCH
T ss_pred             EEECCCcCccccc
Confidence            7899888876543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.96  E-value=1.3e-28  Score=186.72  Aligned_cols=161  Identities=21%  Similarity=0.258  Sum_probs=141.4

Q ss_pred             cccccccccceeccCC----------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWC----------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+.|..++..                      +...+.++.++.||++|+++++++++.+.+ +|++|+|||||
T Consensus        46 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA  125 (299)
T 3t7c_A           46 ITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANA  125 (299)
T ss_dssp             HHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             HHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence            4677888888876543                      122356899999999999999999999999 99999999999


Q ss_pred             cCCCCCC-cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHH
Q psy5462          61 GIVASSS-VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        61 g~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      |...... +.+.+.++|+..+++|+.++++++++++|+|.+++ .|+||++||.+++.+.++...|+++|+++.+|++++
T Consensus       126 g~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  205 (299)
T 3t7c_A          126 ALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTM  205 (299)
T ss_dssp             CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHH
Confidence            9887654 88899999999999999999999999999988765 799999999999999999999999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.|+++.++.+++.+|+++.|++...
T Consensus       206 a~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          206 ALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             HHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             HHHhcccCcEEEEEecCCccCccccc
Confidence            99999776677777999888887643

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.96  E-value=8.6e-29  Score=184.68  Aligned_cols=159  Identities=25%  Similarity=0.264  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++..          ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        22 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~  101 (264)
T 3tfo_A           22 RELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVK  101 (264)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            46778898888776432          22367899999999999999999999999 99999999999998888899999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|+++.+|+++++.|+ + ++.++..
T Consensus       102 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v  179 (264)
T 3tfo_A          102 VDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCV  179 (264)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEE
Confidence            9999999999999999999999999998888999999999999999999999999999999999999997 3 5566666


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|+++.|++...
T Consensus       180 ~PG~v~T~~~~~  191 (264)
T 3tfo_A          180 NPGVVESELAGT  191 (264)
T ss_dssp             EECCC-------
T ss_pred             ecCCCcCccccc
Confidence            888888876543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.96  E-value=5.1e-29  Score=186.52  Aligned_cols=161  Identities=20%  Similarity=0.195  Sum_probs=143.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        46 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~  125 (270)
T 3ftp_A           46 LELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMK  125 (270)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            467788988877764321          2356788999999999999999999999 99999999999998888888999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.
T Consensus       126 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  205 (270)
T 3ftp_A          126 DDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCV  205 (270)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEE
Confidence            99999999999999999999999999988889999999999999999999999999999999999999999776777777


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..|++...
T Consensus       206 ~PG~v~T~~~~~  217 (270)
T 3ftp_A          206 APGFIDTDMTKG  217 (270)
T ss_dssp             EECSBCSHHHHH
T ss_pred             EeCCCcCcchhh
Confidence            999888876543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.96  E-value=7.4e-29  Score=183.39  Aligned_cols=161  Identities=23%  Similarity=0.215  Sum_probs=142.6

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++...       ..+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~  103 (247)
T 3rwb_A           24 ARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH  103 (247)
T ss_dssp             HHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHH
Confidence            467788998887764331       1256789999999999999999999999 99999999999998888889999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|+++|+++.+|+++++.|+++.++.++..+|
T Consensus       104 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  183 (247)
T 3rwb_A          104 WRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP  183 (247)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee
Confidence            999999999999999999999999876 6999999999999999999999999999999999999999977667777789


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..|+....
T Consensus       184 G~v~t~~~~~  193 (247)
T 3rwb_A          184 GLIESDGVKA  193 (247)
T ss_dssp             CSBCCHHHHT
T ss_pred             CcCcCccccc
Confidence            8888876543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.96  E-value=1.4e-28  Score=184.75  Aligned_cols=158  Identities=21%  Similarity=0.204  Sum_probs=141.7

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ..+.++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++
T Consensus        45 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~  124 (277)
T 4dqx_A           45 ELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEET  124 (277)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHH
Confidence            467788998887764321       1356789999999999999999999999 99999999999998888888999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|+++++|+++++.|+++.++.+++.+|+
T Consensus       125 ~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  204 (277)
T 4dqx_A          125 WDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPG  204 (277)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            99999999999999999999999988889999999999999999999999999999999999999999776677777899


Q ss_pred             cccccc
Q psy5462         156 RSVTIL  161 (182)
Q Consensus       156 ~~~~~~  161 (182)
                      +..|++
T Consensus       205 ~v~T~~  210 (277)
T 4dqx_A          205 TIDSPY  210 (277)
T ss_dssp             SBCCHH
T ss_pred             cCcCch
Confidence            888876

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.96  E-value=3e-28  Score=184.29  Aligned_cols=160  Identities=18%  Similarity=0.121  Sum_probs=142.2

Q ss_pred             cccccccccceeccCCCC----------CCC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|..+++...          ..+ .++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        59 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~  138 (293)
T 3rih_A           59 TVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTM  138 (293)
T ss_dssp             HHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            467788888887764432          223 6899999999999999999999999 9999999999999888888999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|+++|++++.|+++++.|++..++.++
T Consensus       139 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  218 (293)
T 3rih_A          139 TPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVN  218 (293)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            99999999999999999999999999998888999999999986 78888999999999999999999999997777777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..++...
T Consensus       219 ~v~PG~v~t~~~~  231 (293)
T 3rih_A          219 AILPGNILTEGLV  231 (293)
T ss_dssp             EEEECSBCCHHHH
T ss_pred             EEecCCCcCcchh
Confidence            7799988887654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.5e-28  Score=184.54  Aligned_cols=160  Identities=24%  Similarity=0.218  Sum_probs=142.9

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ..+.++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+.++
T Consensus        47 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~  126 (277)
T 3gvc_A           47 RRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVED  126 (277)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence            467788998887764321       1256789999999999999999999999 99999999999998888888999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|+++.++.+++.+|+
T Consensus       127 ~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  206 (277)
T 3gvc_A          127 FDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA  206 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            99999999999999999999999998889999999999999999999999999999999999999999776777777999


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..|+...
T Consensus       207 ~v~t~~~~  214 (277)
T 3gvc_A          207 FVDTPMQQ  214 (277)
T ss_dssp             SBCCHHHH
T ss_pred             CccCchHH
Confidence            88887653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=5.8e-28  Score=180.85  Aligned_cols=160  Identities=19%  Similarity=0.120  Sum_probs=141.7

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~   73 (182)
                      ++|.++|+.|...++....       .+.++.++.+|++|+++++++++.+.+ +|++|++|||||...  ...+.+.+.
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~  108 (271)
T 3tzq_B           29 RVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTV  108 (271)
T ss_dssp             HHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCH
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCH
Confidence            5677889998887755432       246788999999999999999999999 999999999999873  456778899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.+++.+
T Consensus       109 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~  188 (271)
T 3tzq_B          109 DVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA  188 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEE
Confidence            99999999999999999999999999988899999999999999999999999999999999999999997766777778


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|+...
T Consensus       189 PG~v~t~~~~  198 (271)
T 3tzq_B          189 PGLVRTPRLE  198 (271)
T ss_dssp             ECCBCCTTTC
T ss_pred             eCCCcCcccc
Confidence            9988887665

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.96  E-value=8.2e-29  Score=184.98  Aligned_cols=160  Identities=19%  Similarity=0.176  Sum_probs=142.2

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|...++...          . .+.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.
T Consensus        38 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  117 (266)
T 4egf_A           38 RAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT  117 (266)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhC
Confidence            467788888887764321          1 356899999999999999999999999 9999999999999888888999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.|+|++++ .|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.++
T Consensus       118 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn  197 (266)
T 4egf_A          118 DPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRAN  197 (266)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            9999999999999999999999999998876 689999999999999999999999999999999999999997766777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ..+|++..|+...
T Consensus       198 ~v~PG~v~T~~~~  210 (266)
T 4egf_A          198 SVCPTVVLTEMGQ  210 (266)
T ss_dssp             EEEESCBCSHHHH
T ss_pred             EEEeCCCcCchhh
Confidence            7789988887654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.96  E-value=2.8e-28  Score=180.79  Aligned_cols=161  Identities=14%  Similarity=0.089  Sum_probs=134.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+.+++|++|||||.....++.+.+.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~  104 (252)
T 3h7a_A           25 KKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTD  104 (252)
T ss_dssp             HHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCH
Confidence            467788998888765432          2356899999999999999999998766578999999999988888999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce-eee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT-TVT  152 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i-~v~  152 (182)
                      ++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+++.+|+++++.|++..++.+ ++.
T Consensus       105 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v  184 (252)
T 3h7a_A          105 RVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLI  184 (252)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEe
Confidence            9999999999999999999999999988889999999999999999999999999999999999999998765555 556


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..|++...
T Consensus       185 ~PG~v~T~~~~~  196 (252)
T 3h7a_A          185 IDSGVDTAWVRE  196 (252)
T ss_dssp             EC----------
T ss_pred             cCCccCChhhhc
Confidence            899888877654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.96  E-value=2.9e-28  Score=181.18  Aligned_cols=158  Identities=17%  Similarity=0.127  Sum_probs=138.7

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++.          +...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~  103 (257)
T 3imf_A           24 TRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLS  103 (257)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCC
Confidence            4677888888777533          234467899999999999999999999999 99999999999988888889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHh-CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC-CCcccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG-YMLWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~~~i~  150 (182)
                      .++|+..+++|+.+++++++++.|+|.+ ++.|+||++||..+..+.++...|+++|+++++|+++++.|++ +.++.++
T Consensus       104 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn  183 (257)
T 3imf_A          104 VNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVN  183 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEE
Confidence            9999999999999999999999999954 4479999999999999999999999999999999999999997 5556777


Q ss_pred             eeCCCcccccc
Q psy5462         151 VTTPLRSVTIL  161 (182)
Q Consensus       151 v~~~~~~~~~~  161 (182)
                      ..+|++..++.
T Consensus       184 ~v~PG~v~t~~  194 (257)
T 3imf_A          184 AIAPGPIERTG  194 (257)
T ss_dssp             EEEECCBSSCC
T ss_pred             EEEECCCcCCc
Confidence            77888777664

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=5.4e-28  Score=182.23  Aligned_cols=159  Identities=16%  Similarity=0.179  Sum_probs=139.9

Q ss_pred             cccccccccceeccCCCCC-----------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.+..+++....                 .+.++.++.||++|+++++++++.+.+ +|++|++|||||....
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~  106 (285)
T 3sc4_A           27 KRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINL  106 (285)
T ss_dssp             HHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             HHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            5678889988887755431                 256899999999999999999999999 9999999999999888


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-CCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .++.+.+.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+. ++...|+++|+++.+|+++++.|++.
T Consensus       107 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~  186 (285)
T 3sc4_A          107 GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRD  186 (285)
T ss_dssp             CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhcc
Confidence            88999999999999999999999999999999998888999999999988775 77899999999999999999999997


Q ss_pred             CccceeeeCCC-ccccccc
Q psy5462         145 MLWGTTVTTPL-RSVTILY  162 (182)
Q Consensus       145 ~~~~i~v~~~~-~~~~~~~  162 (182)
                      .++.++..+|+ ...|+..
T Consensus       187 ~gI~vn~v~PG~~v~t~~~  205 (285)
T 3sc4_A          187 AGIASNTLWPRTTVATAAV  205 (285)
T ss_dssp             GTCEEEEEECSSCBCCHHH
T ss_pred             cCcEEEEEeCCCccccHHH
Confidence            76677777888 4555543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.96  E-value=2.4e-28  Score=186.77  Aligned_cols=160  Identities=27%  Similarity=0.324  Sum_probs=141.7

Q ss_pred             cccccccccceeccCCC----------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWCL----------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+.+..++...                      ...+.++.++.||++|+++++++++.+.+ +|++|+|||||
T Consensus        64 ~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA  143 (317)
T 3oec_A           64 VRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNV  143 (317)
T ss_dssp             HHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             HHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46777888888765331                      12356899999999999999999999999 99999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHH
Q psy5462          61 GIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        61 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      |....+++.+.+.++|+..+++|+.++++++++++|+|++++ .|+||++||..++.+.++...|+++|++++.|+++++
T Consensus       144 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  223 (317)
T 3oec_A          144 GISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLA  223 (317)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            998888889999999999999999999999999999998875 6899999999999999999999999999999999999


Q ss_pred             hhhCCCccceeeeCCCcccccccc
Q psy5462         140 CFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       140 ~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      .|+++.++.++..+|+++.|++..
T Consensus       224 ~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          224 NEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             HHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             HHHhhcCeEEEEEecCcccCcccc
Confidence            999977667777799988887653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.96  E-value=3.2e-28  Score=182.49  Aligned_cols=159  Identities=16%  Similarity=0.158  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCCC-----------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.|...++....                 .+.++.++.||++|+++++++++.+.+ +|++|++|||||....
T Consensus        24 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~  103 (274)
T 3e03_A           24 LRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL  103 (274)
T ss_dssp             HHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccC
Confidence            4677889988887654432                 156889999999999999999999999 9999999999999888


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc--cCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA--AVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .++.+.+.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+  .++...|+++|+++.+|+++++.|++
T Consensus       104 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~  183 (274)
T 3e03_A          104 RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFG  183 (274)
T ss_dssp             CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            8888999999999999999999999999999999888899999999998877  67788999999999999999999999


Q ss_pred             CCccceeeeCCC-ccccccc
Q psy5462         144 YMLWGTTVTTPL-RSVTILY  162 (182)
Q Consensus       144 ~~~~~i~v~~~~-~~~~~~~  162 (182)
                      +.++.++..+|+ ...|++.
T Consensus       184 ~~gI~vn~v~PG~~v~T~~~  203 (274)
T 3e03_A          184 PQGVAINALWPRTVIATDAI  203 (274)
T ss_dssp             GGTCEEEEEECSBCBCC---
T ss_pred             hcCEEEEEEECCcccccchh
Confidence            776677777888 4666554

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.96  E-value=2.5e-28  Score=183.02  Aligned_cols=161  Identities=24%  Similarity=0.202  Sum_probs=141.1

Q ss_pred             cccccccccceeccCCC---------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCL---------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++..         ...+.++.++.||++|+++++++.+.+.+++++|+||||||.....++.+.+.+
T Consensus        49 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~  128 (273)
T 3uf0_A           49 HGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLG  128 (273)
T ss_dssp             HHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHH
T ss_pred             HHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHH
Confidence            46778899888776331         234678999999999999999996655448999999999999888889999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|++..++.+++.+|
T Consensus       129 ~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  208 (273)
T 3uf0_A          129 RWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP  208 (273)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe
Confidence            99999999999999999999999998888999999999999999999999999999999999999999977667777789


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..|+....
T Consensus       209 G~v~T~~~~~  218 (273)
T 3uf0_A          209 GYVVTANTAA  218 (273)
T ss_dssp             CSBCSGGGHH
T ss_pred             CCCcCCchhh
Confidence            9888876543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.96  E-value=1.6e-28  Score=184.67  Aligned_cols=160  Identities=21%  Similarity=0.159  Sum_probs=142.3

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|...++..          ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        42 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~  121 (279)
T 3sju_A           42 RTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLD  121 (279)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCC
Confidence            46778888887776432          23467899999999999999999999999 99999999999998888889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhH--HHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .++|+..+++|+.++++++++++|  .|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++.++.++
T Consensus       122 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  201 (279)
T 3sju_A          122 DALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVN  201 (279)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence            999999999999999999999999  688777899999999999999999999999999999999999999997766777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ..+|++..|++..
T Consensus       202 ~v~PG~v~T~~~~  214 (279)
T 3sju_A          202 AVCPGYVETPMAE  214 (279)
T ss_dssp             EEEESSBCSHHHH
T ss_pred             EEeeCcccchHHH
Confidence            7789988887654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.96  E-value=4.3e-28  Score=180.20  Aligned_cols=161  Identities=14%  Similarity=0.030  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~   67 (182)
                      ++|.++|+.|.+.++...          + .+.++.+++||++|+++++++++.+.+ ||++|++|||||....    ..
T Consensus        26 ~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~  105 (256)
T 4fs3_A           26 KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGR  105 (256)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccc
Confidence            567888999888764321          2 345899999999999999999999999 9999999999998653    45


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|...+++|+.+++.+++.+.+++++  +|+||++||.++..+.++...|+++|+|+.+|+|+||.|+++.++
T Consensus       106 ~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gI  183 (256)
T 4fs3_A          106 FSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNI  183 (256)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCe
Confidence            678899999999999999999999999887654  599999999999999999999999999999999999999997766


Q ss_pred             ceeeeCCCcccccccccch
Q psy5462         148 GTTVTTPLRSVTILYQRSV  166 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~~~  166 (182)
                      .++.++|++..|+..+...
T Consensus       184 rVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          184 RVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             EEEEEEECCCCSGGGTTCT
T ss_pred             EEEEEecCCCCChhhhhcc
Confidence            6666699988888776543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.96  E-value=3.4e-28  Score=179.81  Aligned_cols=159  Identities=24%  Similarity=0.293  Sum_probs=140.5

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ ++++|++|||||....+++.+.+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~  104 (247)
T 2jah_A           25 RALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDAD  104 (247)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCC
Confidence            457778888877754321          1256789999999999999999999999 99999999999998778888999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++++++++.|+|++++ |+||++||..+..+.++...|+++|+++..|+++++.|++..++.+++.
T Consensus       105 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  183 (247)
T 2jah_A          105 TTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVI  183 (247)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            999999999999999999999999998877 9999999999998888999999999999999999999999777777778


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      +|++..|++..
T Consensus       184 ~PG~v~T~~~~  194 (247)
T 2jah_A          184 EPGTTDTELRG  194 (247)
T ss_dssp             EECSBSSSGGG
T ss_pred             ECCCCCCcchh
Confidence            99988887654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.96  E-value=3.2e-28  Score=183.08  Aligned_cols=160  Identities=19%  Similarity=0.110  Sum_probs=141.1

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.|..+++..          ...+.++.++.||++|+++++++++.+.+ +|++|+||||||... ..++.+.
T Consensus        26 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~  105 (280)
T 3tox_A           26 LLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSL  105 (280)
T ss_dssp             HHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhC
Confidence            46778898888776432          33467899999999999999999999999 999999999999874 4778899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+. .+.++...|+++|++++.|+++++.|+++.++.++
T Consensus       106 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn  185 (280)
T 3tox_A          106 SVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVN  185 (280)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            99999999999999999999999999999888999999999987 67888999999999999999999999987767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|+++.|+...
T Consensus       186 ~v~PG~v~T~~~~  198 (280)
T 3tox_A          186 ALLPGGTDTPANF  198 (280)
T ss_dssp             EEEECSBSSTTSG
T ss_pred             EEEECCCCCchhh
Confidence            7789888887643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=2.9e-28  Score=183.34  Aligned_cols=161  Identities=17%  Similarity=0.113  Sum_probs=140.8

Q ss_pred             cccccccccceeccCCC----------CCCC---ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccC-CCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKT---HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGI-VASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~-~~~~~~   68 (182)
                      ++|.++|+.|..+++..          ...+   .++.++.+|++|+++++++++.+.+ +|++|++|||||. ....++
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  108 (281)
T 3svt_A           29 AGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPI  108 (281)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCc
Confidence            46778888887776332          1222   3899999999999999999999999 9999999999998 445678


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+..+++|+.+++++++++.|+|.+++.|+||++||..++.+.++...|++||++++.|+++++.|++...+.
T Consensus       109 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~  188 (281)
T 3svt_A          109 TQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVR  188 (281)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            89999999999999999999999999999999888999999999999999999999999999999999999999876667


Q ss_pred             eeeeCCCccccccccc
Q psy5462         149 TTVTTPLRSVTILYQR  164 (182)
Q Consensus       149 i~v~~~~~~~~~~~~~  164 (182)
                      +++.+|++..|+....
T Consensus       189 vn~v~PG~v~t~~~~~  204 (281)
T 3svt_A          189 VNSIRPGLIRTDLVAA  204 (281)
T ss_dssp             EEEEEECSBCSGGGHH
T ss_pred             EEEEEeCcCcCcchhh
Confidence            7777899888877654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.96  E-value=9.9e-28  Score=177.57  Aligned_cols=160  Identities=18%  Similarity=0.128  Sum_probs=137.1

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+++........+.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+..+++
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~  104 (250)
T 2fwm_X           25 LAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAV  104 (250)
T ss_dssp             HHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence            4677889998887754432222378899999999999999999999 999999999999987778888999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|+++.++.+++.+|++..++..
T Consensus       105 N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  184 (250)
T 2fwm_X          105 NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ  184 (250)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred             ccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence            99999999999999999887899999999999988889999999999999999999999987767777778998887765


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       185 ~  185 (250)
T 2fwm_X          185 R  185 (250)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.96  E-value=1e-28  Score=184.56  Aligned_cols=161  Identities=20%  Similarity=0.246  Sum_probs=132.2

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+...++...       ..+.++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+.+.++
T Consensus        45 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~  124 (266)
T 3grp_A           45 RCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQD  124 (266)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH
Confidence            467788888877764321       2356799999999999999999999999 99999999999998888888899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|.|++++.|+||++||..+..+.++...|+++|+++..|+++++.|++..++.+++.+|+
T Consensus       125 ~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG  204 (266)
T 3grp_A          125 WDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPG  204 (266)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeC
Confidence            99999999999999999999999988889999999999999989999999999999999999999999776677777899


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..+++...
T Consensus       205 ~v~t~~~~~  213 (266)
T 3grp_A          205 FIKSAMTDK  213 (266)
T ss_dssp             SBCSHHHHT
T ss_pred             cCCCchhhc
Confidence            888876654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.96  E-value=4.9e-28  Score=180.82  Aligned_cols=159  Identities=17%  Similarity=0.199  Sum_probs=142.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|...++....... ...+.+|++|.+++.++++.+.+ +|++|+||||||....+++.+.+.++|+..+++
T Consensus        46 ~~la~~G~~V~~~~r~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v  124 (266)
T 3uxy_A           46 TALRAAGARVAVADRAVAGIAA-DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGV  124 (266)
T ss_dssp             HHHHHTTCEEEECSSCCTTSCC-SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHh-hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            5678889998888866544333 25568999999999999999999 999999999999988888899999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.+++.+|++..|++.
T Consensus       125 N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  204 (266)
T 3uxy_A          125 NVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPML  204 (266)
T ss_dssp             HTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHH
T ss_pred             HhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHh
Confidence            99999999999999999888899999999999999999999999999999999999999997767777779998888765


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       205 ~  205 (266)
T 3uxy_A          205 R  205 (266)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.96  E-value=5.2e-28  Score=178.98  Aligned_cols=160  Identities=21%  Similarity=0.226  Sum_probs=137.5

Q ss_pred             cccccccccceeccCCC-C-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCL-P-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++.. .       ..+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.+.+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~  104 (249)
T 2ew8_A           25 ERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE  104 (249)
T ss_dssp             HHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHH
T ss_pred             HHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHH
Confidence            45777888888776543 1       1256789999999999999999999999 9999999999998877788889999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+..+++|+.++++++++++|+|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+++.+|
T Consensus       105 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  184 (249)
T 2ew8_A          105 QWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP  184 (249)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence            99999999999999999999999998878999999999999888899999999999999999999999876667777789


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..|+...
T Consensus       185 g~v~t~~~~  193 (249)
T 2ew8_A          185 SLVRTATTE  193 (249)
T ss_dssp             CCC------
T ss_pred             CcCcCccch
Confidence            888877654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=2.8e-28  Score=181.43  Aligned_cols=161  Identities=16%  Similarity=0.139  Sum_probs=141.9

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++...       ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+.++
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~  105 (259)
T 4e6p_A           26 EAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES  105 (259)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHH
Confidence            467788998887764321       1245788999999999999999999999 99999999999998888889999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.+++++++++.|+|.+++ .|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.+++.+|
T Consensus       106 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P  185 (259)
T 4e6p_A          106 YEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAP  185 (259)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEE
Confidence            999999999999999999999998876 6899999999999999999999999999999999999999877667777789


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..++....
T Consensus       186 G~v~t~~~~~  195 (259)
T 4e6p_A          186 GVVDGEHWDG  195 (259)
T ss_dssp             CCBCSTTHHH
T ss_pred             CCCccchhhh
Confidence            8888776543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.8e-27  Score=177.16  Aligned_cols=161  Identities=15%  Similarity=0.155  Sum_probs=142.1

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+.|..+++.... ...++.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+.++|+..++
T Consensus        46 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~  125 (260)
T 3un1_A           46 RAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLG  125 (260)
T ss_dssp             HHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence            5678889999988866543 345789999999999999999999999 99999999999998888889999999999999


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      +|+.++++++++++|.|++++.++||++||..+..  +.++...|+++|++++.|+++++.|+++.++.+++.+|++..+
T Consensus       126 vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  205 (260)
T 3un1_A          126 VNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKT  205 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCC
T ss_pred             HhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCC
Confidence            99999999999999999998889999999987764  3455689999999999999999999997767777779998888


Q ss_pred             ccccc
Q psy5462         160 ILYQR  164 (182)
Q Consensus       160 ~~~~~  164 (182)
                      ++...
T Consensus       206 ~~~~~  210 (260)
T 3un1_A          206 PMHPA  210 (260)
T ss_dssp             TTSCG
T ss_pred             CCCCH
Confidence            77654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.96  E-value=1.3e-27  Score=178.28  Aligned_cols=158  Identities=25%  Similarity=0.260  Sum_probs=142.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+++.... +.++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++|+..+++
T Consensus        26 ~~l~~~G~~V~~~~r~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~  104 (264)
T 2dtx_A           26 ERFVDEGSKVIDLSIHDPG-EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDV  104 (264)
T ss_dssp             HHHHHTTCEEEEEESSCCC-SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEecCccc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence            4677889998888765433 56789999999999999999999999 999999999999987778888999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++++++|.|++++.++||++||..+..+.++...|+++|++++.|+++++.|++.. +.+++.+|++..++..
T Consensus       105 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~  183 (264)
T 2dtx_A          105 NLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLV  183 (264)
T ss_dssp             HTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHH
T ss_pred             hhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcch
Confidence            999999999999999988878999999999998888899999999999999999999999876 7778889998887764


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       184 ~  184 (264)
T 2dtx_A          184 R  184 (264)
T ss_dssp             H
T ss_pred             h
Confidence            3

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.95  E-value=5.3e-28  Score=179.97  Aligned_cols=160  Identities=24%  Similarity=0.261  Sum_probs=139.0

Q ss_pred             cccccccccceeccCCCCC-C-----------CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-K-----------THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~-----------~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..+++.... .           +.++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+
T Consensus        22 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~  101 (260)
T 1x1t_A           22 TALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED  101 (260)
T ss_dssp             HHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGG
T ss_pred             HHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhh
Confidence            4577789888877654322 0           55788999999999999999999999 999999999999887778888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.++++++++++|+|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.++
T Consensus       102 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  181 (260)
T 1x1t_A          102 FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN  181 (260)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence            99999999999999999999999999999877899999999999888889999999999999999999999987766777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..|++..
T Consensus       182 ~v~Pg~v~t~~~~  194 (260)
T 1x1t_A          182 AICPGWVRTPLVE  194 (260)
T ss_dssp             EEEECCBCC----
T ss_pred             EEeecCccCchHH
Confidence            7799988887654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.95  E-value=2.2e-28  Score=183.63  Aligned_cols=158  Identities=16%  Similarity=0.106  Sum_probs=140.4

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...           ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        45 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  124 (277)
T 4fc7_A           45 EIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGAL  124 (277)
T ss_dssp             HHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccC
Confidence            467788988887764432           1256899999999999999999999999 9999999999998887888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+.+....|+++|+++.+|+++++.|+++.++.+++
T Consensus       125 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~  204 (277)
T 4fc7_A          125 SFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNS  204 (277)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999999999999999999988778999999999999999999999999999999999999999976666777


Q ss_pred             eCCCcccccc
Q psy5462         152 TTPLRSVTIL  161 (182)
Q Consensus       152 ~~~~~~~~~~  161 (182)
                      .+|++..++.
T Consensus       205 v~PG~v~t~~  214 (277)
T 4fc7_A          205 LAPGPISGTE  214 (277)
T ss_dssp             EEECCBSSSH
T ss_pred             EEECCEecch
Confidence            7888877653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.95  E-value=1.6e-28  Score=180.40  Aligned_cols=160  Identities=18%  Similarity=0.160  Sum_probs=133.2

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++....       .+.++.++.+|++|+++++++++.+.+ +|++|++|||||.....++.+.+.++
T Consensus        21 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~  100 (235)
T 3l6e_A           21 IGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQ  100 (235)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHH
Confidence            4677889988877644321       133689999999999999999999999 99999999999998778888999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.++++++++++|+|++++ ++||++||..+..+.++...|+++|+++++|+++++.|++..++.+...+|+
T Consensus       101 ~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  179 (235)
T 3l6e_A          101 IRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPS  179 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCC
Confidence            999999999999999999999998765 5999999999999999999999999999999999999998766666677888


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|++...
T Consensus       180 ~v~T~~~~~  188 (235)
T 3l6e_A          180 GIRSEFWDN  188 (235)
T ss_dssp             EECCCC---
T ss_pred             CccCcchhc
Confidence            888776544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.95  E-value=3.5e-28  Score=181.34  Aligned_cols=160  Identities=17%  Similarity=0.228  Sum_probs=140.9

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-CCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-ASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-~~~~~~~~   71 (182)
                      ++|.++|+.|...++..          ...+.++.++.||++|+++++++++.+.+ +|++|++|||||.. ...++.+.
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~  108 (264)
T 3ucx_A           29 RRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANT  108 (264)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGC
T ss_pred             HHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhC
Confidence            46778898888776432          22467899999999999999999999999 99999999999885 45778899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++.|+|++++ |+||++||..+..+.++...|+++|++++.|+++++.|+++.++.++.
T Consensus       109 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~  187 (264)
T 3ucx_A          109 TFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNS  187 (264)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            9999999999999999999999999998765 999999999999999999999999999999999999999977677777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..++....
T Consensus       188 v~PG~v~t~~~~~  200 (264)
T 3ucx_A          188 VLPGYIWGGTLKS  200 (264)
T ss_dssp             EEESSCBSHHHHH
T ss_pred             EecCccccccHHH
Confidence            7999888776543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.95  E-value=4e-28  Score=181.86  Aligned_cols=161  Identities=22%  Similarity=0.166  Sum_probs=137.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~~~   74 (182)
                      ++|.++|+.|...++...       ..+.++.++.||++|+++++++++.+.+ +|++|+||||||...+ .++.+.+.+
T Consensus        46 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~  125 (272)
T 4dyv_A           46 VALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFA  125 (272)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHH
Confidence            467788988887764432       1246789999999999999999999999 9999999999998765 678899999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      +|+..+++|+.++++++++++|+|++++  .|+||++||..+..+.++...|+++|+++++|+++++.|++...+.++..
T Consensus       126 ~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  205 (272)
T 4dyv_A          126 QWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQI  205 (272)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            9999999999999999999999999876  68999999999999999999999999999999999999998766666677


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|+++.|++...
T Consensus       206 ~PG~v~T~~~~~  217 (272)
T 4dyv_A          206 DIGNADTPMAQK  217 (272)
T ss_dssp             EEEECC------
T ss_pred             EECcccChhhhh
Confidence            888888776543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.7e-28  Score=185.13  Aligned_cols=139  Identities=27%  Similarity=0.283  Sum_probs=129.2

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN  101 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  101 (182)
                      +.++.++.||++|+++++++++.+.+ +|++|+||||||... ..++.+.+.++|+..+++|+.++++++++++|+|+++
T Consensus        86 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  165 (287)
T 3rku_A           86 NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK  165 (287)
T ss_dssp             TCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            56899999999999999999999999 999999999999876 5678889999999999999999999999999999988


Q ss_pred             CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         102 NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       102 ~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      +.|+||++||.++..+.++...|+++|+++++|+++++.|++..++.+++.+|+++.|++.
T Consensus       166 ~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~  226 (287)
T 3rku_A          166 NSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFS  226 (287)
T ss_dssp             TCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHH
T ss_pred             CCCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccc
Confidence            8899999999999999999999999999999999999999997777777779998888764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.95  E-value=8e-28  Score=178.82  Aligned_cols=160  Identities=23%  Similarity=0.247  Sum_probs=140.4

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+++...            ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~   99 (258)
T 3a28_C           20 EKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLE   99 (258)
T ss_dssp             HHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhh
Confidence            456777888777654322            2256789999999999999999999999 999999999999987778888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.++|+.++++|+.+++++++++.|+|++++. ++||++||..+..+.++...|+++|++++.|+++++.|++..++.+
T Consensus       100 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  179 (258)
T 3a28_C          100 VTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV  179 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence            999999999999999999999999999988776 9999999999988888999999999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ++.+|++..|++..
T Consensus       180 n~v~PG~v~t~~~~  193 (258)
T 3a28_C          180 NAYAPGIVGTGMWE  193 (258)
T ss_dssp             EEEEECCBCSHHHH
T ss_pred             EEEECCccCChhhh
Confidence            77799988887654

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=6.9e-28  Score=177.96  Aligned_cols=161  Identities=20%  Similarity=0.232  Sum_probs=143.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++..          ...+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+
T Consensus        23 ~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~  102 (247)
T 3lyl_A           23 HALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMS  102 (247)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCC
Confidence            46777888887776432          22356899999999999999999999999 99999999999998888888999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.++++++++++|+|.+++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+.+.
T Consensus       103 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  182 (247)
T 3lyl_A          103 EDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVV  182 (247)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEE
Confidence            99999999999999999999999999988889999999999999999999999999999999999999998776777777


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..++....
T Consensus       183 ~PG~v~t~~~~~  194 (247)
T 3lyl_A          183 APGFIATDMTDK  194 (247)
T ss_dssp             EECSBCCTTTTT
T ss_pred             eeCcEecccchh
Confidence            899888877654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=4.6e-28  Score=178.94  Aligned_cols=160  Identities=19%  Similarity=0.197  Sum_probs=140.2

Q ss_pred             cccccccccceeccC-CC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPW-CL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.+ ..          ...+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        22 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  101 (246)
T 2uvd_A           22 IDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRM  101 (246)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            456778888877654 21          11256789999999999999999999999 9999999999999877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|+++..|+++++.|++..++.+++
T Consensus       102 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  181 (246)
T 2uvd_A          102 KEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNA  181 (246)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999999999999999999998778999999999988888889999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..+++..
T Consensus       182 v~Pg~v~t~~~~  193 (246)
T 2uvd_A          182 IAPGFIATDMTD  193 (246)
T ss_dssp             EEECSBGGGCSS
T ss_pred             EEeccccCcchh
Confidence            789988877654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.95  E-value=2.5e-27  Score=175.85  Aligned_cols=161  Identities=19%  Similarity=0.177  Sum_probs=142.8

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+........           ..+.++.++.+|++|.++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        31 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~  110 (256)
T 3ezl_A           31 QRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKM  110 (256)
T ss_dssp             HHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhC
Confidence            467788888877652211           2356789999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.+.+
T Consensus       111 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  190 (256)
T 3ezl_A          111 TREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT  190 (256)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence            99999999999999999999999999999888999999999999999999999999999999999999999876667777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       191 v~PG~v~t~~~~~  203 (256)
T 3ezl_A          191 VSPGYIGTDMVKA  203 (256)
T ss_dssp             EEECSBCCHHHHT
T ss_pred             EEECcccCccccc
Confidence            7899888877654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.95  E-value=3.1e-28  Score=180.36  Aligned_cols=159  Identities=16%  Similarity=0.185  Sum_probs=132.8

Q ss_pred             cccccccccceeccCCCCC-------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.|..+++....             ...++.++.||++|+++++++++.+.+ +|++|++|||||.....++ 
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~-  103 (250)
T 3nyw_A           25 AGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL-  103 (250)
T ss_dssp             HHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC-
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC-
Confidence            4677788888777643211             226788999999999999999999999 9999999999999877777 


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+++.+|+++++.|+++.++.+
T Consensus       104 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  183 (250)
T 3nyw_A          104 SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRV  183 (250)
T ss_dssp             SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            77899999999999999999999999999988889999999999988777789999999999999999999999776677


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      +..+|++..|++..
T Consensus       184 n~v~PG~v~T~~~~  197 (250)
T 3nyw_A          184 TTLCPGWVNTDMAK  197 (250)
T ss_dssp             EEEEESSBCSHHHH
T ss_pred             EEEecCcccCchhh
Confidence            77789988877654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.95  E-value=8.3e-28  Score=178.62  Aligned_cols=161  Identities=23%  Similarity=0.204  Sum_probs=135.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc----cC
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL----AH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~----~~   71 (182)
                      ++|.++|+.|..+++...       ..+.++.++.+|++|+++++++++.+.+ +|++|++|||||......+.    +.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~  104 (257)
T 3tpc_A           25 RMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPH  104 (257)
T ss_dssp             HHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEEC
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccC
Confidence            467788998887764432       2245788999999999999999999999 99999999999987655443    67


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      +.++|+..+++|+.+++++++++.|+|+++      +.|+||++||..++.+.++...|+++|++++.|+++++.|+++.
T Consensus       105 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~  184 (257)
T 3tpc_A          105 ALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARF  184 (257)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHc
Confidence            899999999999999999999999999875      57899999999999999999999999999999999999999977


Q ss_pred             ccceeeeCCCccccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++.+++.+|++..|+....
T Consensus       185 gi~vn~v~PG~v~t~~~~~  203 (257)
T 3tpc_A          185 GIRVVTIAPGIFDTPMMAG  203 (257)
T ss_dssp             TEEEEEEEECCBSCC----
T ss_pred             CeEEEEEEeCCCCChhhcc
Confidence            6677777999888876543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.95  E-value=5.3e-28  Score=183.59  Aligned_cols=161  Identities=24%  Similarity=0.332  Sum_probs=143.9

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ +|++|+||||||....+++.+.+
T Consensus        49 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~  128 (301)
T 3tjr_A           49 TEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMN  128 (301)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCC
Confidence            467778888877764321          2356899999999999999999999999 99999999999998888889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+..+++|+.++++++++++|+|++++ .|+||++||..++.+.++...|++||++++.|+++++.|++..++.+.+
T Consensus       129 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~  208 (301)
T 3tjr_A          129 HDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSV  208 (301)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            999999999999999999999999999876 7899999999999999999999999999999999999999877677888


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|+++.|++...
T Consensus       209 v~PG~v~T~~~~~  221 (301)
T 3tjr_A          209 LCPMVVETKLVSN  221 (301)
T ss_dssp             ECCSCCCSSHHHH
T ss_pred             EECCccccccccc
Confidence            8999988877654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.95  E-value=2.9e-27  Score=176.44  Aligned_cols=160  Identities=19%  Similarity=0.146  Sum_probs=140.7

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+......            .+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+
T Consensus        40 ~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~  119 (267)
T 3gdg_A           40 RGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILD  119 (267)
T ss_dssp             HHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTT
T ss_pred             HHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCccc
Confidence            5677889988887654332            256899999999999999999999999 999999999999988888889


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc--CCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.  ++...|+++|++++.|+++++.|++.. +.
T Consensus       120 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~  198 (267)
T 3gdg_A          120 GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-AR  198 (267)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CE
T ss_pred             CCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cE
Confidence            999999999999999999999999999998888999999999887765  578899999999999999999999865 56


Q ss_pred             eeeeCCCccccccccc
Q psy5462         149 TTVTTPLRSVTILYQR  164 (182)
Q Consensus       149 i~v~~~~~~~~~~~~~  164 (182)
                      +...+|++..|+....
T Consensus       199 v~~v~PG~v~t~~~~~  214 (267)
T 3gdg_A          199 VNSISPGYIDTGLSDF  214 (267)
T ss_dssp             EEEEEECCEECSCGGG
T ss_pred             EEEEECCccccchhhh
Confidence            7777898888877643

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=2.5e-27  Score=175.81  Aligned_cols=160  Identities=28%  Similarity=0.279  Sum_probs=141.4

Q ss_pred             cccccccccceeccCCCC--------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP--------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++...        ..+.++.++.+|++|+++++++++.+.+ +|++|++|||||.....++.+.+.+
T Consensus        22 ~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~  101 (255)
T 2q2v_A           22 QVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLE  101 (255)
T ss_dssp             HHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHH
T ss_pred             HHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHH
Confidence            467788988887765432        2256788999999999999999999999 9999999999998877778889999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+..+++|+.++++++++++|.|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+++.+|
T Consensus       102 ~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  181 (255)
T 2q2v_A          102 SWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICP  181 (255)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEee
Confidence            99999999999999999999999998878999999999998888889999999999999999999999877667777799


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..+++..
T Consensus       182 g~v~t~~~~  190 (255)
T 2q2v_A          182 GWVLTPLVQ  190 (255)
T ss_dssp             SSBCCHHHH
T ss_pred             CCCcCcchh
Confidence            988887654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.95  E-value=8.2e-28  Score=179.58  Aligned_cols=160  Identities=21%  Similarity=0.213  Sum_probs=140.4

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~   69 (182)
                      ++|.++|+.|..+++....            .+.++.++.||++|+++++++++.+.+ +|++|+||||||.... .++.
T Consensus        31 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  110 (267)
T 1iy8_A           31 VRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTE  110 (267)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcc
Confidence            4577788888777643211            156789999999999999999999999 9999999999998766 7788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+.++++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.+
T Consensus       111 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  190 (267)
T 1iy8_A          111 SFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI  190 (267)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence            89999999999999999999999999999988789999999999988888999999999999999999999998766777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ++.+|++..+++..
T Consensus       191 ~~v~PG~v~t~~~~  204 (267)
T 1iy8_A          191 NAIAPGAIWTPMVE  204 (267)
T ss_dssp             EEEEECSBCSHHHH
T ss_pred             EEEEeCCCcCcchh
Confidence            77799988877643

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.95  E-value=6.8e-28  Score=180.25  Aligned_cols=161  Identities=20%  Similarity=0.248  Sum_probs=143.3

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.......           ...+.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.
T Consensus        43 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~  122 (269)
T 3gk3_A           43 RRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKM  122 (269)
T ss_dssp             HHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTC
T ss_pred             HHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhC
Confidence            46778888887765221           23467899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++.++|.|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+.+
T Consensus       123 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~  202 (269)
T 3gk3_A          123 TKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNT  202 (269)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999877677777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       203 v~PG~v~T~~~~~  215 (269)
T 3gk3_A          203 VSPGYLATAMVEA  215 (269)
T ss_dssp             EEECSBCCTTTTC
T ss_pred             EecCcccchhhhh
Confidence            7999888877654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.1e-28  Score=184.11  Aligned_cols=161  Identities=19%  Similarity=0.212  Sum_probs=129.2

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccC--CCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGI--VASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~--~~~~~~~   69 (182)
                      ++|.++|+.+.+++..-           ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.  ....++.
T Consensus        47 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~  126 (280)
T 4da9_A           47 RALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFL  126 (280)
T ss_dssp             HHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGG
T ss_pred             HHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChh
Confidence            46778898888776321           22357899999999999999999999999 9999999999998  4457788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      +.+.++|+..+++|+.++++++++++|+|++++   .|+||++||..+..+.++...|+++|++++.|+++++.|+++.+
T Consensus       127 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g  206 (280)
T 4da9_A          127 DLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETG  206 (280)
T ss_dssp             GCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999998865   68999999999999999999999999999999999999999776


Q ss_pred             cceeeeCCCccccccccc
Q psy5462         147 WGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~~~  164 (182)
                      +.+++.+|+++.|+....
T Consensus       207 I~vn~v~PG~v~T~~~~~  224 (280)
T 4da9_A          207 IAVFEVRPGIIRSDMTAA  224 (280)
T ss_dssp             EEEEEEEECCBCC-----
T ss_pred             cEEEEEeecCCcCCchhh
Confidence            677777899888876543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.95  E-value=1.7e-27  Score=178.68  Aligned_cols=161  Identities=23%  Similarity=0.155  Sum_probs=142.0

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|...++....          .+.++.++.+|++|++++.++++.+.+.+++|++|||||.....++.+.+.
T Consensus        51 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~  130 (275)
T 4imr_A           51 EGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTP  130 (275)
T ss_dssp             HHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCH
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCH
Confidence            4677889988887754432          256899999999999999999998877788999999999988888899999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.+....|+++|+++..|+++++.|++..++.+++.+
T Consensus       131 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~  210 (275)
T 4imr_A          131 NDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLA  210 (275)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEE
Confidence            99999999999999999999999999888899999999999888888889999999999999999999997666677778


Q ss_pred             CCccccccccc
Q psy5462         154 PLRSVTILYQR  164 (182)
Q Consensus       154 ~~~~~~~~~~~  164 (182)
                      |++..|+....
T Consensus       211 PG~v~T~~~~~  221 (275)
T 4imr_A          211 PGLVDTDRNAD  221 (275)
T ss_dssp             ESSBCSHHHHH
T ss_pred             eccccCccccc
Confidence            99888876543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.95  E-value=3.1e-27  Score=176.24  Aligned_cols=161  Identities=20%  Similarity=0.201  Sum_probs=138.9

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+++..           ...+.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.
T Consensus        41 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~  120 (266)
T 3o38_A           41 RRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDM  120 (266)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccC
Confidence            46777888887775332           12346899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|+++ +.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+.
T Consensus       121 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  200 (266)
T 3o38_A          121 TDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRIN  200 (266)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence            999999999999999999999999999987 5789999999999999999999999999999999999999987666777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +.+|++..++....
T Consensus       201 ~v~PG~v~t~~~~~  214 (266)
T 3o38_A          201 AVSPSIARHKFLEK  214 (266)
T ss_dssp             EEEECCCCC-----
T ss_pred             EEeCCcccchhhhc
Confidence            77898888877544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.95  E-value=6.2e-28  Score=180.57  Aligned_cols=158  Identities=22%  Similarity=0.182  Sum_probs=138.4

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.......           ...+.++.++.||++|+++++++++.+.+ +|++|++|||||....+++.+.
T Consensus        36 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~  115 (270)
T 3is3_A           36 VHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDV  115 (270)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            46778888887754321           22467899999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc-cccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA-ALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|++  .|+||++||.. +..+.++...|+++|++++.|+++++.|++..++.++
T Consensus       116 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn  193 (270)
T 3is3_A          116 TEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVN  193 (270)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            99999999999999999999999999866  58999999988 5567888999999999999999999999997767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ..+|++..|++..
T Consensus       194 ~v~PG~v~T~~~~  206 (270)
T 3is3_A          194 AVAPGGTVTDMFH  206 (270)
T ss_dssp             EEEECSBCSTTHH
T ss_pred             EEEeCCccChhhh
Confidence            7799988887654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.2e-27  Score=179.99  Aligned_cols=160  Identities=19%  Similarity=0.131  Sum_probs=136.3

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|.++|+.|..+++....           .+..+.++.||++|+++++++++.+.+ +|++|+||||||.... .++.+
T Consensus        51 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~  130 (281)
T 4dry_A           51 QALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEE  130 (281)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccc
Confidence            4677888888877643321           122358999999999999999999999 9999999999998754 67889


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.++|+..+++|+.++++++++++|+|++++  .|+||++||..+..+.++...|+++|+++++|+++++.|++..++.
T Consensus       131 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  210 (281)
T 4dry_A          131 VTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIA  210 (281)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            99999999999999999999999999999875  6899999999999999999999999999999999999999976666


Q ss_pred             eeeeCCCcccccccc
Q psy5462         149 TTVTTPLRSVTILYQ  163 (182)
Q Consensus       149 i~v~~~~~~~~~~~~  163 (182)
                      ++..+|+++.|++..
T Consensus       211 vn~v~PG~v~T~~~~  225 (281)
T 4dry_A          211 CGQIDIGNAATDMTA  225 (281)
T ss_dssp             EEEEEEECBCC----
T ss_pred             EEEEEECcCcChhhh
Confidence            677788888777654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.95  E-value=1.5e-27  Score=176.84  Aligned_cols=158  Identities=16%  Similarity=0.198  Sum_probs=138.4

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccC--CCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADV--SDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~--s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~   68 (182)
                      ++|.++|+.|..+++....           .+.++.++.+|+  +|+++++++++.+.+ +|++|++|||||... ..++
T Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  109 (252)
T 3f1l_A           30 MTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPM  109 (252)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCT
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCc
Confidence            4677889888877643211           123788999999  999999999999999 999999999999864 4678


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+++++|+++++.|+++. +.
T Consensus       110 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-ir  188 (252)
T 3f1l_A          110 SEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LR  188 (252)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CE
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cE
Confidence            88999999999999999999999999999999888999999999999999999999999999999999999999865 66


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      ++..+|++..|++.
T Consensus       189 vn~v~PG~v~t~~~  202 (252)
T 3f1l_A          189 VNCINPGGTRTAMR  202 (252)
T ss_dssp             EEEEECCSBSSHHH
T ss_pred             EEEEecCcccCchh
Confidence            77778998887664

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-27  Score=178.27  Aligned_cols=160  Identities=25%  Similarity=0.273  Sum_probs=140.4

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...           ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        39 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~  118 (267)
T 1vl8_A           39 QGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEF  118 (267)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhC
Confidence            457778888887764321           1256788999999999999999999999 9999999999999877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc-cccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA-ALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.++++++++++|+|++++.++||++||.. +..+.++...|+++|++++.|+++++.|++..++.++
T Consensus       119 ~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  198 (267)
T 1vl8_A          119 PLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVN  198 (267)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            999999999999999999999999999888789999999998 8888888999999999999999999999987767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..|++..
T Consensus       199 ~v~PG~v~T~~~~  211 (267)
T 1vl8_A          199 VIAPGWYRTKMTE  211 (267)
T ss_dssp             EEEECCBCSTTTH
T ss_pred             EEEeccCcccccc
Confidence            7799988877643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.95  E-value=5.5e-27  Score=181.04  Aligned_cols=157  Identities=20%  Similarity=0.196  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCCC-----------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~   65 (182)
                      ++|.++|+.|..+++....                 .+.++.++.||++|+++++++++.+.+ +|++|+||||||....
T Consensus        63 ~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~  142 (346)
T 3kvo_A           63 LKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISL  142 (346)
T ss_dssp             HHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred             HHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence            5678889988887755432                 256899999999999999999999999 9999999999999888


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc--cCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA--AVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .++.+.+.++|+.++++|+.++++++++++|+|++++.++||++||..+..+  .++...|+++|+++..|+++++.|++
T Consensus       143 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~  222 (346)
T 3kvo_A          143 TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK  222 (346)
T ss_dssp             CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            8889999999999999999999999999999999988899999999998876  67889999999999999999999998


Q ss_pred             CCccceeeeCCCc-ccccc
Q psy5462         144 YMLWGTTVTTPLR-SVTIL  161 (182)
Q Consensus       144 ~~~~~i~v~~~~~-~~~~~  161 (182)
                       ..+.++..+|++ ..|..
T Consensus       223 -~gIrvn~v~PG~~i~T~~  240 (346)
T 3kvo_A          223 -GEIAVNALWPKTAIHTAA  240 (346)
T ss_dssp             -TTCEEEEEECSBCBCCHH
T ss_pred             -CCcEEEEEeCCCccccHH
Confidence             656666668874 55544

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.95  E-value=4.3e-27  Score=176.59  Aligned_cols=161  Identities=19%  Similarity=0.183  Sum_probs=139.9

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|...++...          ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        50 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~  129 (276)
T 3r1i_A           50 LAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMP  129 (276)
T ss_dssp             HHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCC
Confidence            467788988887765432          2356889999999999999999999999 99999999999998888889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccccc--CCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAA--VNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .++|+..+++|+.+++++++++.|+|++++ +++||++||..+..+.  ++...|+++|++++.|+++++.|++..++.+
T Consensus       130 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrv  209 (276)
T 3r1i_A          130 LEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRV  209 (276)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            999999999999999999999999999876 4899999999887653  3678999999999999999999999766677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|+++.|+....
T Consensus       210 n~v~PG~v~T~~~~~  224 (276)
T 3r1i_A          210 NSVSPGYIRTELVEP  224 (276)
T ss_dssp             EEEEECCBCSTTTGG
T ss_pred             EEEeeCCCcCCcccc
Confidence            777899888877654

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.95  E-value=9.2e-28  Score=178.89  Aligned_cols=160  Identities=19%  Similarity=0.202  Sum_probs=139.9

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-CCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-ASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-~~~~~~~~   71 (182)
                      ++|.++|+.|..+++..          ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.. ...++.+.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~  104 (262)
T 1zem_A           25 LRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDY  104 (262)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccC
Confidence            45777888887765432          12356789999999999999999999999 99999999999987 56778889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++.|+|++++.|+||++||..+..+.+....|+++|+++..|+++++.|++..++.+++
T Consensus       105 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~  184 (262)
T 1zem_A          105 PSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA  184 (262)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEE
Confidence            99999999999999999999999999998778999999999998888889999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..|++..
T Consensus       185 v~PG~v~t~~~~  196 (262)
T 1zem_A          185 ISPGYMGPGFMW  196 (262)
T ss_dssp             EEECSBCSSHHH
T ss_pred             EecCCcCcchhh
Confidence            789888777643

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.95  E-value=1.6e-27  Score=177.55  Aligned_cols=161  Identities=22%  Similarity=0.247  Sum_probs=137.7

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccC-CCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGI-VASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~-~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|++++.++++.+.+ +|++|+||||||. ...+++.+.
T Consensus        47 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~  126 (262)
T 3rkr_A           47 RKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTM  126 (262)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGS
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccC
Confidence            467778888877764332          2357899999999999999999999999 9999999999998 445678889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+.+
T Consensus       127 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~  206 (262)
T 3rkr_A          127 KPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSL  206 (262)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999877777788


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       207 v~PG~v~t~~~~~  219 (262)
T 3rkr_A          207 VAPGSVRTEFGVG  219 (262)
T ss_dssp             EEECCC-------
T ss_pred             EecCCCcCCcccc
Confidence            8999888876543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=1.5e-27  Score=178.70  Aligned_cols=160  Identities=23%  Similarity=0.249  Sum_probs=137.7

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ + +++|+||||||.....++.+.
T Consensus        39 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  118 (273)
T 1ae1_A           39 EELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF  118 (273)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhC
Confidence            456778888877764321          2256789999999999999999999999 9 899999999999877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|++..++.+++
T Consensus       119 ~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  198 (273)
T 1ae1_A          119 TEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNS  198 (273)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            99999999999999999999999999988778999999999999888899999999999999999999999876677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..++...
T Consensus       199 v~Pg~v~t~~~~  210 (273)
T 1ae1_A          199 VAPGVILTPLVE  210 (273)
T ss_dssp             EEECSBC-----
T ss_pred             EEeCCCcCchhh
Confidence            789988887654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.95  E-value=1e-27  Score=177.38  Aligned_cols=159  Identities=23%  Similarity=0.184  Sum_probs=135.9

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+++...       ..+.++.++.+|++|+++++++++.+.+ +|++|+||||||... ..++.+.+.+
T Consensus        18 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~   97 (248)
T 3asu_A           18 RRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVE   97 (248)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHH
Confidence            457778888887764321       1134688999999999999999999988 999999999999863 5677888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|+++.++.+++.+|
T Consensus        98 ~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  177 (248)
T 3asu_A           98 DWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            99999999999999999999999988778999999999999888899999999999999999999999877677777789


Q ss_pred             Cccc-cccc
Q psy5462         155 LRSV-TILY  162 (182)
Q Consensus       155 ~~~~-~~~~  162 (182)
                      ++.. |++.
T Consensus       178 G~v~gT~~~  186 (248)
T 3asu_A          178 GLVGGTEFS  186 (248)
T ss_dssp             CSBCC----
T ss_pred             cccccCcch
Confidence            8887 7654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.95  E-value=1.4e-27  Score=177.39  Aligned_cols=160  Identities=19%  Similarity=0.214  Sum_probs=140.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.+
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~   99 (256)
T 1geg_A           20 LRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESIT   99 (256)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCC
Confidence            457778888877754321          1256788999999999999999999999 99999999999988777888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+..+++|+.++++++++++|+|++++ .++||++||..+..+.++...|+++|++++.|+++++.|++..++.+++
T Consensus       100 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  179 (256)
T 1geg_A          100 PEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG  179 (256)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            999999999999999999999999999876 7999999999998888889999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..+++..
T Consensus       180 v~PG~v~t~~~~  191 (256)
T 1geg_A          180 YCPGIVKTPMWA  191 (256)
T ss_dssp             EEECSBSSHHHH
T ss_pred             EEECCCccchhh
Confidence            799988887643

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.95  E-value=1.5e-27  Score=177.81  Aligned_cols=160  Identities=18%  Similarity=0.205  Sum_probs=140.7

Q ss_pred             cccccccccceeccCCCCC----------C-CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------K-THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~-~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++....          . +.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~  104 (263)
T 3ai3_A           25 EGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEA  104 (263)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            4577788888877643211          1 56789999999999999999999999 9999999999998877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..++.+.++...|+++|++++.++++++.|+++.++.+++
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  184 (263)
T 3ai3_A          105 ADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC  184 (263)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999999999999999999988778999999999998888889999999999999999999999876677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..++...
T Consensus       185 v~Pg~v~t~~~~  196 (263)
T 3ai3_A          185 INPGLILTPDWI  196 (263)
T ss_dssp             EEECCBCCHHHH
T ss_pred             EecCcccCcchh
Confidence            799988887653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.95  E-value=1.3e-27  Score=177.44  Aligned_cols=159  Identities=23%  Similarity=0.234  Sum_probs=139.7

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ..+.++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~  102 (254)
T 1hdc_A           23 RQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER  102 (254)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence            457778888877754321       1245788999999999999999999999 99999999999988777788899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|.|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+++.+|+
T Consensus       103 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (254)
T 1hdc_A          103 FRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG  182 (254)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecc
Confidence            99999999999999999999999988789999999999988888999999999999999999999998766677777898


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..++..
T Consensus       183 ~v~t~~~  189 (254)
T 1hdc_A          183 MTYTPMT  189 (254)
T ss_dssp             SBCCHHH
T ss_pred             cCcCccc
Confidence            8877654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.95  E-value=6.9e-28  Score=178.97  Aligned_cols=158  Identities=20%  Similarity=0.130  Sum_probs=140.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++...       ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~  105 (255)
T 4eso_A           26 RRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEAS  105 (255)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence            467788998887764432       1246899999999999999999999999 99999999999998888899999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++++++++.|+|++  .|+||++||.++..+.++...|+++|++++.|+++++.|+++.++.++..+|+
T Consensus       106 ~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  183 (255)
T 4eso_A          106 YDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPG  183 (255)
T ss_dssp             HHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEEC
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecC
Confidence            9999999999999999999999865  48999999999999999999999999999999999999999776777777899


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..|+...
T Consensus       184 ~v~T~~~~  191 (255)
T 4eso_A          184 FIDTPTKG  191 (255)
T ss_dssp             SBCCSSTT
T ss_pred             cccCcccc
Confidence            88887654

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.6e-27  Score=178.11  Aligned_cols=158  Identities=23%  Similarity=0.233  Sum_probs=135.9

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.+.....           ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        45 ~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~  124 (267)
T 3u5t_A           45 ARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAET  124 (267)
T ss_dssp             HHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            46778888887763221           22356899999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++  .|+||++||..+..+.++...|+++|++++.|+++++.|+++.++.++.
T Consensus       125 ~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  202 (267)
T 3u5t_A          125 GDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNA  202 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            99999999999999999999999999865  4899999999998888999999999999999999999999977677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..|++..
T Consensus       203 v~PG~v~T~~~~  214 (267)
T 3u5t_A          203 VAPGPTATDLFL  214 (267)
T ss_dssp             EEECCBC-----
T ss_pred             EEECCCcCcccc
Confidence            799988887754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=2.5e-27  Score=176.30  Aligned_cols=160  Identities=20%  Similarity=0.155  Sum_probs=140.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ + +++|++|||||.....++.+.
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~  106 (260)
T 2ae2_A           27 EELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY  106 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhC
Confidence            457778888877754321          1256789999999999999999999999 8 899999999998877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.++++++.|++..++.+++
T Consensus       107 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  186 (260)
T 2ae2_A          107 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNG  186 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            99999999999999999999999999998878999999999998888889999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..++...
T Consensus       187 v~Pg~v~t~~~~  198 (260)
T 2ae2_A          187 VGPGVIATSLVE  198 (260)
T ss_dssp             EEECSBCSHHHH
T ss_pred             EecCCCCCcchh
Confidence            788888777643

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=3e-27  Score=176.00  Aligned_cols=157  Identities=16%  Similarity=0.105  Sum_probs=134.9

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++.....     ...+.++.||++|+++++++++.+.+ ++++|+||||||...... .+.+.++|+
T Consensus        45 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~-~~~~~~~~~  123 (260)
T 3gem_A           45 LRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAET-PGEEADNFT  123 (260)
T ss_dssp             HHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCC-TTCHHHHHH
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCC-CCCCHHHHH
Confidence            46778899988887654321     12478999999999999999999999 999999999999876655 566889999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|+++ .+.+++.+|++.
T Consensus       124 ~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v  202 (260)
T 3gem_A          124 RMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALL  202 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeeccc
Confidence            9999999999999999999999988899999999999999999999999999999999999999987 466777788887


Q ss_pred             ccccc
Q psy5462         158 VTILY  162 (182)
Q Consensus       158 ~~~~~  162 (182)
                      .++..
T Consensus       203 ~t~~~  207 (260)
T 3gem_A          203 MFQPK  207 (260)
T ss_dssp             CC---
T ss_pred             ccCCC
Confidence            76654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=3.6e-27  Score=177.22  Aligned_cols=160  Identities=21%  Similarity=0.263  Sum_probs=142.7

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++....       .+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~  102 (281)
T 3m1a_A           23 EAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERE  102 (281)
T ss_dssp             HHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHH
Confidence            4677889988877654321       246789999999999999999999999 99999999999998778888999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|++++.++++++.|++..++.+++.+|+
T Consensus       103 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  182 (281)
T 3m1a_A          103 LRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG  182 (281)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence            99999999999999999999999988889999999999999999999999999999999999999998776777778898


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..++...
T Consensus       183 ~v~t~~~~  190 (281)
T 3m1a_A          183 AFRTNLFG  190 (281)
T ss_dssp             CBCCTTTC
T ss_pred             cccccccc
Confidence            88777654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.95  E-value=4.3e-28  Score=180.75  Aligned_cols=159  Identities=18%  Similarity=0.174  Sum_probs=134.9

Q ss_pred             cccccccccceeccCC-------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWC-------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.+..+.+.             +...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.
T Consensus        29 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~  108 (262)
T 3ksu_A           29 KTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIV  108 (262)
T ss_dssp             HHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGG
T ss_pred             HHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence            5677889888876421             223467899999999999999999999999 99999999999998888899


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.++++++++++|+|+  +.|+||++||..+..+.+....|+++|+++.+|+++++.|++..++.+
T Consensus       109 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  186 (262)
T 3ksu_A          109 ETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISV  186 (262)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence            999999999999999999999999999984  358999999999988888899999999999999999999998776777


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|++..|++...
T Consensus       187 n~v~PG~v~T~~~~~  201 (262)
T 3ksu_A          187 NAIAPGPMDTSFFYG  201 (262)
T ss_dssp             EEEEECCCCTHHHHT
T ss_pred             EEEeeCCCcCccccc
Confidence            777999888876543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=4.2e-27  Score=174.75  Aligned_cols=158  Identities=24%  Similarity=0.239  Sum_probs=137.7

Q ss_pred             cccccccccceeccCCCCCCC-----ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT-----HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++......     .+ .++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~  102 (256)
T 2d1y_A           24 QAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWR  102 (256)
T ss_dssp             HHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHH
T ss_pred             HHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH
Confidence            467788998887765443200     03 7899999999999999999988 9999999999999877788889999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.+|++.
T Consensus       103 ~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  182 (256)
T 2d1y_A          103 RVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAI  182 (256)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCc
Confidence            99999999999999999999998888999999999998888899999999999999999999999876666677788887


Q ss_pred             ccccc
Q psy5462         158 VTILY  162 (182)
Q Consensus       158 ~~~~~  162 (182)
                      .++..
T Consensus       183 ~t~~~  187 (256)
T 2d1y_A          183 ATEAV  187 (256)
T ss_dssp             CCHHH
T ss_pred             cCchh
Confidence            77654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=6.7e-27  Score=179.16  Aligned_cols=157  Identities=19%  Similarity=0.221  Sum_probs=135.8

Q ss_pred             cccccccccceeccCCCC---------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP---------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|....+.+.               ..+.++.++.+|++|+++++++++.+.+ +|++|++|||||....++
T Consensus        23 ~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~  102 (324)
T 3u9l_A           23 EALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGP  102 (324)
T ss_dssp             HHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSC
T ss_pred             HHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence            567788998886554321               1246799999999999999999999999 999999999999988888


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      +.+.+.++|+.++++|+.|+++++++++|+|++++.|+||++||.++.. +.+....|++||+++++|+++++.|+++.+
T Consensus       103 ~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~g  182 (324)
T 3u9l_A          103 AEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWG  182 (324)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhC
Confidence            9999999999999999999999999999999998889999999999874 446678999999999999999999998776


Q ss_pred             cceeeeCCCccccc
Q psy5462         147 WGTTVTTPLRSVTI  160 (182)
Q Consensus       147 ~~i~v~~~~~~~~~  160 (182)
                      +.+++..|++..++
T Consensus       183 I~v~~v~PG~v~t~  196 (324)
T 3u9l_A          183 IETSIIVPGAFTSG  196 (324)
T ss_dssp             EEEEEEEECCC---
T ss_pred             cEEEEEECCccccC
Confidence            77777788877643

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.95  E-value=6.8e-27  Score=172.83  Aligned_cols=159  Identities=22%  Similarity=0.250  Sum_probs=130.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+++..... ..+..+.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+.++++
T Consensus        33 ~~l~~~G~~V~~~~r~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~  111 (247)
T 1uzm_A           33 QRLAADGHKVAVTHRGSGAP-KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINA  111 (247)
T ss_dssp             HHHHHTTCEEEEEESSSCCC-TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCChHHH-HHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            46778899888877654322 2233589999999999999999999 999999999999987777888999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.+|++..++..
T Consensus       112 N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  191 (247)
T 1uzm_A          112 NLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT  191 (247)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             HhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccch
Confidence            99999999999999999887899999999999888888999999999999999999999987666777778988877764


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       192 ~  192 (247)
T 1uzm_A          192 R  192 (247)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.9e-27  Score=177.05  Aligned_cols=159  Identities=21%  Similarity=0.173  Sum_probs=137.9

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+...+...           ...+.++.++.||++|+++++++++.+.+ +|++|+||||||.....++.+.
T Consensus        49 ~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~  128 (271)
T 3v2g_A           49 KRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET  128 (271)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhC
Confidence            46778888887764221           22367899999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-cCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.|+|++  .|+||++||..+..+ .++...|+++|++++.|+++++.|+++.++.++
T Consensus       129 ~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn  206 (271)
T 3v2g_A          129 TVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVN  206 (271)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            99999999999999999999999999864  589999999776654 688899999999999999999999997767777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +.+|+++.|+....
T Consensus       207 ~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          207 IVHPGSTDTDMNPA  220 (271)
T ss_dssp             EEEECSBCSSSSCS
T ss_pred             EEecCCCcCCcccc
Confidence            77899888877643

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.95  E-value=1.8e-27  Score=176.58  Aligned_cols=159  Identities=19%  Similarity=0.247  Sum_probs=135.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|....+.... ...+.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+.+.++|+..+++
T Consensus        39 ~~l~~~G~~V~~~~r~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~  117 (253)
T 2nm0_A           39 RAFADAGDKVAITYRSGEP-PEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVET  117 (253)
T ss_dssp             HHHHHTTCEEEEEESSSCC-CTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHH
T ss_pred             HHHHHCCCEEEEEeCChHh-hccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence            4677889998887765433 23488999999999999999999999 999999999999987777888899999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.+++++++++.|.|++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.+|++..|+..
T Consensus       118 N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  197 (253)
T 2nm0_A          118 NLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMT  197 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence            99999999999999999877899999999998887777899999999999999999999997766777778888877764


Q ss_pred             c
Q psy5462         163 Q  163 (182)
Q Consensus       163 ~  163 (182)
                      .
T Consensus       198 ~  198 (253)
T 2nm0_A          198 K  198 (253)
T ss_dssp             -
T ss_pred             h
Confidence            3

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=2.7e-27  Score=177.17  Aligned_cols=161  Identities=20%  Similarity=0.158  Sum_probs=141.0

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.+..           ...+.++.++.||++|++++.++++.+.+ ++++|++|||||.....++.+.
T Consensus        47 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~  126 (271)
T 4iin_A           47 KTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKM  126 (271)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccC
Confidence            46778888888776532           12356899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.++++++.|++..++.+..
T Consensus       127 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  206 (271)
T 4iin_A          127 KTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNS  206 (271)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             CHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999876667777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|+....
T Consensus       207 v~PG~v~T~~~~~  219 (271)
T 4iin_A          207 VTPGFIETDMNAN  219 (271)
T ss_dssp             EEECSBCCC----
T ss_pred             EEeCcccCCchhh
Confidence            7898888876544

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=5.9e-27  Score=174.40  Aligned_cols=159  Identities=25%  Similarity=0.250  Sum_probs=139.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ....++.++.+|++|+++++++++.+.+ +|++|++|||||....+++.+.+.++
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~  104 (260)
T 1nff_A           25 RAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTE  104 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH
Confidence            457778888887764321       1123588899999999999999999999 99999999999998777888899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|.|++++.++||++||..++.+.++...|+++|++++.++++++.|++..++.+++.+|+
T Consensus       105 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  184 (260)
T 1nff_A          105 WQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG  184 (260)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeC
Confidence            99999999999999999999999987789999999999988888899999999999999999999998766677777898


Q ss_pred             ccccccc
Q psy5462         156 RSVTILY  162 (182)
Q Consensus       156 ~~~~~~~  162 (182)
                      +..++..
T Consensus       185 ~v~t~~~  191 (260)
T 1nff_A          185 LVKTPMT  191 (260)
T ss_dssp             CBCSGGG
T ss_pred             CCCCCcc
Confidence            8877764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=2.1e-27  Score=178.28  Aligned_cols=157  Identities=24%  Similarity=0.279  Sum_probs=134.8

Q ss_pred             cccccccccceeccCCC----------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWCL----------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+.|..++..-                      ...+.++.++.||++|+++++++++.+.+ +|++|+|||||
T Consensus        31 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA  110 (278)
T 3sx2_A           31 VRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANA  110 (278)
T ss_dssp             HHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred             HHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46778888888775431                      12256899999999999999999999999 99999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccccc----CCCchhhhhHHHHHHHH
Q psy5462          61 GIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAA----VNVSAYFASKYGVTENH  135 (182)
Q Consensus        61 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~----~~~~~y~~sKaa~~~~~  135 (182)
                      |......    +.++|+.++++|+.++++++++++|+|++++ .|+||++||.++..+.    ++...|+++|++++.|+
T Consensus       111 g~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~  186 (278)
T 3sx2_A          111 GIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLM  186 (278)
T ss_dssp             CCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHH
Confidence            9875443    5899999999999999999999999998875 6899999999988766    66789999999999999


Q ss_pred             HHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         136 PSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       136 ~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++++.|++..++.++..+|+++.|++...
T Consensus       187 ~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          187 RVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             HHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             HHHHHHHhccCcEEEEEecCCccCccchh
Confidence            99999999776777777999888887654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.95  E-value=4.4e-27  Score=177.92  Aligned_cols=159  Identities=15%  Similarity=0.094  Sum_probs=135.1

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC----CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA----SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~----~~~~~   69 (182)
                      ++|.++|+.|...++...         ...+++.++.||++|+++++++++.+.+ +|++|+||||||...    ..++.
T Consensus        51 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  130 (293)
T 3grk_A           51 KAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI  130 (293)
T ss_dssp             HHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGG
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCccccccccc
Confidence            467788888877754311         1124688999999999999999999999 999999999999876    46788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++++++.|+|++  .|+||++||..+..+.+....|+++|++++.|+++++.|++..++.+
T Consensus       131 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  208 (293)
T 3grk_A          131 DTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRV  208 (293)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEE
Confidence            8999999999999999999999999999875  68999999999999999999999999999999999999999776677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|+++.|+....
T Consensus       209 n~v~PG~v~T~~~~~  223 (293)
T 3grk_A          209 NAISAGPIKTLAASG  223 (293)
T ss_dssp             EEEEECCCCC-----
T ss_pred             EEEecCCCcchhhhc
Confidence            777899888876543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.8e-27  Score=178.33  Aligned_cols=160  Identities=18%  Similarity=0.164  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~   72 (182)
                      ++|.++|+.|..+++....         ...++.++.||++|+++++++++.+.+ +|++|+||||||.... .++.+.+
T Consensus        39 ~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~  118 (272)
T 2nwq_A           39 RRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCD  118 (272)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCC
Confidence            4577788888877643210         114788999999999999999999988 9999999999998764 7788899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC-eEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|+.++++|+.++++++++++|.|++++.| +||++||..+..+.++...|+++|++++.|+++++.|++..++.+++
T Consensus       119 ~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~  198 (272)
T 2nwq_A          119 LDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN  198 (272)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            99999999999999999999999999987778 99999999998888889999999999999999999999877677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      .+|++..|++..
T Consensus       199 v~PG~v~T~~~~  210 (272)
T 2nwq_A          199 LEPGLCESEFSL  210 (272)
T ss_dssp             EEECSBC-----
T ss_pred             EEcCCCcCcchh
Confidence            789988877643

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.95  E-value=4.1e-27  Score=180.02  Aligned_cols=161  Identities=22%  Similarity=0.267  Sum_probs=138.6

Q ss_pred             cccccccccceeccCCCC----------CC--CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TK--THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~--~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|+++|+.|...++...          ..  +.++.++.+|++|+++++++++.+.+ ++++|+||||||....+++.+
T Consensus        26 ~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~  105 (319)
T 3ioy_A           26 RQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEE  105 (319)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCccc
Confidence            467788888877764321          11  23899999999999999999999999 999999999999988888999


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .+.++|+.++++|+.|+++++++++|.|.++      +.|+||++||.++..+.+....|++||+++.+|+++++.|+..
T Consensus       106 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~  185 (319)
T 3ioy_A          106 SSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLK  185 (319)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999875      5799999999999999999999999999999999999999987


Q ss_pred             CccceeeeCCCccccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .++.+.+.+|+++.|++...
T Consensus       186 ~gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          186 YEIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             GTCEEEEECCCCBC------
T ss_pred             cCCEEEEEEcCeEccCcccc
Confidence            77788888999988877654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=1.6e-27  Score=177.40  Aligned_cols=158  Identities=22%  Similarity=0.182  Sum_probs=134.3

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-CCCCccc
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-ASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-~~~~~~~   70 (182)
                      ++|.++|+.+......           +...+.++.++.||++|+++++++++.+.+ +|++|++|||||.. ...++.+
T Consensus        26 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  105 (259)
T 3edm_A           26 IRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAE  105 (259)
T ss_dssp             HHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTT
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhh
Confidence            4677889988876321           123467899999999999999999999999 99999999999987 5677889


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      .+.++|+..+++|+.++++++++++|+|++  .|+||++||..+. .+.++...|+++|++++.|+++++.|+++. +.+
T Consensus       106 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~v  182 (259)
T 3edm_A          106 MDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRV  182 (259)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEE
Confidence            999999999999999999999999999876  5899999999988 678889999999999999999999999875 677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|++..|++...
T Consensus       183 n~v~PG~v~T~~~~~  197 (259)
T 3edm_A          183 NAVCPGMISTTFHDT  197 (259)
T ss_dssp             EEEEECCBCC-----
T ss_pred             EEEEECCCcCccccc
Confidence            777898888876544

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=3.6e-27  Score=174.09  Aligned_cols=159  Identities=18%  Similarity=0.098  Sum_probs=137.3

Q ss_pred             cccccccccceeccCCCCCC-----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++.....     ...+.++.||++|+++++++++.+.+ +|++|++|||||.....++.+.+.++|+
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~  102 (245)
T 1uls_A           23 ELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWE  102 (245)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH
Confidence            45777888888776432110     00278899999999999999999999 9999999999999877788889999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .++++|+.+++++++++.|+|++++.++||++||.. ..+.++...|+++|+++..|+++++.|++..++.+++.+|++.
T Consensus       103 ~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  181 (245)
T 1uls_A          103 LVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFI  181 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcC
Confidence            999999999999999999999988789999999998 7788889999999999999999999999876667777789988


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|+...
T Consensus       182 ~t~~~~  187 (245)
T 1uls_A          182 ETRMTA  187 (245)
T ss_dssp             CCTTTS
T ss_pred             cCcchh
Confidence            877654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=8.6e-27  Score=173.64  Aligned_cols=161  Identities=18%  Similarity=0.237  Sum_probs=138.8

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEccc--CCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAG--IVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag--~~~~~~~~   69 (182)
                      ++|.++|+.+..+....           ...+.++.++.||++|+++++++++.+.+ ++++|++|||||  .....++.
T Consensus        25 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~  104 (264)
T 3i4f_A           25 EKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLV  104 (264)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGG
T ss_pred             HHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccc
Confidence            46778888888774322           22356899999999999999999999999 999999999999  55557788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecc-cc-ccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSI-AA-LTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~-~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.++|+..+++|+.++++++++++|+|++++.++||++||. .+ ..+.++...|+++|++++.|+++++.|++..++
T Consensus       105 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi  184 (264)
T 3i4f_A          105 DYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGI  184 (264)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             cCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCc
Confidence            8999999999999999999999999999998888999999987 43 456677899999999999999999999987767


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+.+.+|++..++....
T Consensus       185 ~v~~v~PG~v~t~~~~~  201 (264)
T 3i4f_A          185 TANMVCPGDIIGEMKEA  201 (264)
T ss_dssp             EEEEEEECCCCGGGGSC
T ss_pred             EEEEEccCCccCccchh
Confidence            77777999888887655

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.95  E-value=3.6e-27  Score=178.62  Aligned_cols=159  Identities=11%  Similarity=0.063  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|+++|+.|...++...         ...+.+.++.||++|+++++++++.+.+ +|++|+||||||....    .++.
T Consensus        50 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  129 (296)
T 3k31_A           50 KAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYV  129 (296)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGG
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChh
Confidence            467788998887764421         1123468999999999999999999999 9999999999998764    6788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++++++.|+|++  .|+||++||..+..+.++...|+++|+++..|+++++.|++..++.+
T Consensus       130 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrv  207 (296)
T 3k31_A          130 DTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRV  207 (296)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            8999999999999999999999999999865  68999999999999999999999999999999999999999776677


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|+++.|+....
T Consensus       208 n~v~PG~v~T~~~~~  222 (296)
T 3k31_A          208 NAISAGPVRTLASSG  222 (296)
T ss_dssp             EEEEECCCCCSSCCS
T ss_pred             EEEEECCCcCchhhc
Confidence            777999888877654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=9.9e-27  Score=174.57  Aligned_cols=159  Identities=20%  Similarity=0.153  Sum_probs=130.2

Q ss_pred             cccccccccceeccCCC-------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL-------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.|..+++..             ...+.++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~  103 (278)
T 1spx_A           24 VLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQS  103 (278)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC--------
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccc
Confidence            45677888887776432             22356789999999999999999999999 99999999999987777777


Q ss_pred             cC----CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc-ccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          70 AH----TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        70 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      +.    +.++|+..+++|+.+++++++++.|+|++++ |+||++||..+ +.+.++...|+++|++++.++++++.|++.
T Consensus       104 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  182 (278)
T 1spx_A          104 KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ  182 (278)
T ss_dssp             -----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence            77    9999999999999999999999999998766 99999999998 888888999999999999999999999987


Q ss_pred             CccceeeeCCCcccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~  163 (182)
                      .++.+++.+|++..++...
T Consensus       183 ~gi~v~~v~Pg~v~t~~~~  201 (278)
T 1spx_A          183 HGIRVNSISPGLVATGFGS  201 (278)
T ss_dssp             GTCEEEEEEECCBCCCC--
T ss_pred             cCcEEEEEecCcccCcccc
Confidence            7677778899988877653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.94  E-value=5.6e-27  Score=177.15  Aligned_cols=158  Identities=14%  Similarity=0.122  Sum_probs=137.4

Q ss_pred             cccccccccceecc-CCCC-----------CCCceeEEEEccCCCHH-----------------HHHHHHHHHHh-cCCc
Q psy5462           4 DRTTGHIHGILFIP-WCLP-----------TKTHVAVYFKADVSDKA-----------------EIKKLNENVRK-IGYV   53 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~~-----------~~~~~~~~~~~D~s~~~-----------------~~~~~~~~~~~-~~~i   53 (182)
                      ++|.++|+.|..++ +...           ..+.++.++.+|++|++                 +++++++.+.+ +|++
T Consensus        27 ~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~i  106 (291)
T 1e7w_A           27 EGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRC  106 (291)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence            45677888887776 3321           23567999999999999                 99999999999 9999


Q ss_pred             cEEEEcccCCCCCCcccCC--------------HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccc
Q psy5462          54 DILINNAGIVASSSVLAHT--------------DHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIA  113 (182)
Q Consensus        54 d~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~  113 (182)
                      |+||||||.....++.+.+              .++|+.++++|+.++++++++++|+|++++      .++||++||..
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~  186 (291)
T 1e7w_A          107 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  186 (291)
T ss_dssp             CEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred             CEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechh
Confidence            9999999988777788888              999999999999999999999999998876      69999999999


Q ss_pred             cccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         114 ALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       114 ~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +..+.++...|+++|+++..|+++++.|++..++.++..+|+++.|++
T Consensus       187 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          187 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            998989999999999999999999999998766677777899888876

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.94  E-value=3.3e-27  Score=175.02  Aligned_cols=159  Identities=19%  Similarity=0.221  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++....       .+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~  103 (253)
T 1hxh_A           24 KLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED  103 (253)
T ss_dssp             HHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH
Confidence            4577788888777643211       145788999999999999999999999 99999999999998777888899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC--ccceeeeC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM--LWGTTVTT  153 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~~~i~v~~  153 (182)
                      |+.++++|+.++++++++++|.|++++ ++||++||..++.+.++...|+++|++++.|+++++.|+++.  ++.+++.+
T Consensus       104 ~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~  182 (253)
T 1hxh_A          104 FSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH  182 (253)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEE
Confidence            999999999999999999999998877 999999999999888899999999999999999999999865  56777778


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..++...
T Consensus       183 Pg~v~t~~~~  192 (253)
T 1hxh_A          183 PDGIYTPMMQ  192 (253)
T ss_dssp             ESEECCHHHH
T ss_pred             eCCccCchhh
Confidence            8888776643

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.94  E-value=4.7e-27  Score=176.43  Aligned_cols=160  Identities=24%  Similarity=0.199  Sum_probs=140.1

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.+
T Consensus        40 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~  119 (277)
T 2rhc_B           40 RRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELA  119 (277)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCC
Confidence            456778888877764321          1256789999999999999999999999 99999999999988777888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHH--HHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPD--MLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .++|+..+++|+.++++++++++|.  |++++.++||++||..+..+.++...|+++|++++.|+++++.|++..++.++
T Consensus       120 ~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  199 (277)
T 2rhc_B          120 DELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN  199 (277)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence            9999999999999999999999999  88877799999999999888889999999999999999999999987766777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..+++..
T Consensus       200 ~v~PG~v~t~~~~  212 (277)
T 2rhc_B          200 AVCPGFVETPMAA  212 (277)
T ss_dssp             EEEECSBCSHHHH
T ss_pred             EEecCcCcCchhh
Confidence            7789988877643

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.94  E-value=6.8e-27  Score=175.49  Aligned_cols=159  Identities=18%  Similarity=0.180  Sum_probs=137.8

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+ ++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.+
T Consensus        47 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~  125 (276)
T 2b4q_A           47 QGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYP  125 (276)
T ss_dssp             HHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCC
Confidence            456778888877764321          122 788999999999999999999999 99999999999988777888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC----CeEEEEeccccccccCCCc-hhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNT----GHIVCISSIAALTAAVNVS-AYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~ii~iss~~~~~~~~~~~-~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .++|+..+++|+.++++++++++|.|++++.    ++||++||..++.+.+... .|+++|++++.|+++++.|++..++
T Consensus       126 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI  205 (276)
T 2b4q_A          126 VSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHI  205 (276)
T ss_dssp             SHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCe
Confidence            9999999999999999999999999987665    8999999999988888888 9999999999999999999987666


Q ss_pred             ceeeeCCCcccccccc
Q psy5462         148 GTTVTTPLRSVTILYQ  163 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~  163 (182)
                      .+++.+|++..|++..
T Consensus       206 ~vn~v~PG~v~T~~~~  221 (276)
T 2b4q_A          206 NVNVIAPGRFPSRMTR  221 (276)
T ss_dssp             EEEEEEECCCCSTTTH
T ss_pred             EEEEEEeccCcCcchh
Confidence            7777788888777643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.94  E-value=7.1e-27  Score=172.35  Aligned_cols=158  Identities=20%  Similarity=0.201  Sum_probs=138.3

Q ss_pred             ccccc-ccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTG-HIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.+ .|+.+...+........++.++.+|++|+++++++++.+. ++++|++|||||.....++.+.+.++|+.++++
T Consensus        22 ~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~-~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v  100 (244)
T 4e4y_A           22 ELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIK-NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDL  100 (244)
T ss_dssp             HHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTT-TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred             HHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHH-hCCCCEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence            34555 7888877776655456778999999999999999996554 678999999999988888899999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.+++++++++.|+|+++  |+||++||..++.+.++...|+++|++++.|+++++.|+++.++.+++.+|++..|++.
T Consensus       101 N~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  178 (244)
T 4e4y_A          101 NVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY  178 (244)
T ss_dssp             HTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH
T ss_pred             ccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh
Confidence            9999999999999998764  89999999999999999999999999999999999999997777777889998888765


Q ss_pred             cc
Q psy5462         163 QR  164 (182)
Q Consensus       163 ~~  164 (182)
                      ..
T Consensus       179 ~~  180 (244)
T 4e4y_A          179 RN  180 (244)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.94  E-value=5.6e-27  Score=174.44  Aligned_cols=159  Identities=14%  Similarity=0.086  Sum_probs=138.7

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..+++....            .+.++.++.+|++|+++++++++.+.+ +| +|++|||||.....++.+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~~~~~~  103 (260)
T 2z1n_A           25 LELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRPGRFME  103 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCCBCGGG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCCCCccc
Confidence            4567788888777643211            033788999999999999999999999 99 999999999887778888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.++++++++++|+|++++.++||++||..++.+.++...|+++|++++.++++++.|++..++.++
T Consensus       104 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (260)
T 2z1n_A          104 LGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN  183 (260)
T ss_dssp             CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            99999999999999999999999999999887899999999999988888999999999999999999999987666777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..++...
T Consensus       184 ~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          184 AVLPSLILTDRVR  196 (260)
T ss_dssp             EEEECHHHHCCCC
T ss_pred             EEEECCcccchhh
Confidence            7788888777654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=5.7e-27  Score=175.07  Aligned_cols=156  Identities=21%  Similarity=0.238  Sum_probs=135.6

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|...++...            ..+..+..+.+|++|+++++++++.   ++++|++|||||.....++.+.
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~g~id~lv~nAg~~~~~~~~~~  104 (267)
T 3t4x_A           28 TSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK---YPKVDILINNLGIFEPVEYFDI  104 (267)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---CCCCSEEEECCCCCCCCCGGGS
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---cCCCCEEEECCCCCCCCccccC
Confidence            467788888887764321            1145788999999999998877654   6899999999999888888999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++.++.
T Consensus       105 ~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~  184 (267)
T 3t4x_A          105 PDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNT  184 (267)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999999977666777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|++..|+..
T Consensus       185 v~PG~v~t~~~  195 (267)
T 3t4x_A          185 IMPGSTLTEGV  195 (267)
T ss_dssp             EEECCBCCHHH
T ss_pred             EeCCeecCccH
Confidence            78888877654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.94  E-value=1.2e-26  Score=172.62  Aligned_cols=159  Identities=17%  Similarity=0.174  Sum_probs=138.2

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.|..+++...          ..+.++.++.||++|+++++++++.+.+ +|++|++|||||... .+++.+.
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~  111 (260)
T 2zat_A           32 RRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDA  111 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccC
Confidence            457778888877764321          2255788999999999999999999999 999999999999864 3667888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+++
T Consensus       112 ~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  191 (260)
T 2zat_A          112 TEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC  191 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999998888999999999999888899999999999999999999999876666777


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      ..|++..++..
T Consensus       192 v~Pg~v~t~~~  202 (260)
T 2zat_A          192 LAPGLIKTNFS  202 (260)
T ss_dssp             EEECSBCSSTT
T ss_pred             EEECcccCccc
Confidence            78888777654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=3.7e-27  Score=180.49  Aligned_cols=158  Identities=20%  Similarity=0.184  Sum_probs=136.5

Q ss_pred             cccccccccceeccCC--------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccC
Q psy5462           4 DRTTGHIHGILFIPWC--------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGI   62 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~--------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~   62 (182)
                      ++|+++|+.|.+++..                    +...+.++.++.||++|+++++++++.+.+ +|++|+||||||.
T Consensus        45 ~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A           45 LAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            4677889988877643                    112356889999999999999999999999 9999999999999


Q ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccccccccCCCchhhhhHHHHHHHHH
Q psy5462          63 VASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIAALTAAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~  136 (182)
                      ....++.+.+.++|+..+++|+.+++++++++.++|.+.+      .|+||++||..+..+.++...|+++|++++.|++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~  204 (322)
T 3qlj_A          125 VRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTL  204 (322)
T ss_dssp             CCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHH
Confidence            8888889999999999999999999999999999988532      3799999999999999999999999999999999


Q ss_pred             HHHhhhCCCccceeeeCCCccccccc
Q psy5462         137 SIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       137 ~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      +++.|++..++.+++.+|+ ..+++.
T Consensus       205 ~la~e~~~~gI~vn~v~PG-~~t~~~  229 (322)
T 3qlj_A          205 VGAAEMGRYGVTVNAIAPS-ARTRMT  229 (322)
T ss_dssp             HHHHHHGGGTEEEEEEEEC-TTSCCS
T ss_pred             HHHHHhcccCcEEEEecCC-CCCccc
Confidence            9999999765666666777 444443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=1.1e-26  Score=174.64  Aligned_cols=159  Identities=18%  Similarity=0.149  Sum_probs=137.9

Q ss_pred             cccccccccceeccCCCC----------CCCc---eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC--
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTH---VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS--   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~---~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~--   67 (182)
                      ++|.++|+.|..+++...          ..+.   ++.++.||++|+++++++++.+.+ +|++|+||||||.....+  
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~  103 (280)
T 1xkq_A           24 ILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFG  103 (280)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCC
Confidence            456778888877754321          1233   789999999999999999999999 999999999999876666  


Q ss_pred             --cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-CCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          68 --VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        68 --~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                        +.+.+.++|+..+++|+.+++++++++.|+|++++ ++||++||..+..+. ++...|+++|++++.|+++++.|++.
T Consensus       104 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~  182 (280)
T 1xkq_A          104 TTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK  182 (280)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhcc
Confidence              77889999999999999999999999999998766 999999999988877 88899999999999999999999987


Q ss_pred             CccceeeeCCCcccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~  163 (182)
                      .++.+++.+|++..|+...
T Consensus       183 ~gi~v~~v~PG~v~t~~~~  201 (280)
T 1xkq_A          183 FGIRVNSVSPGMVETGFTN  201 (280)
T ss_dssp             TTCEEEEEEECCBCSSHHH
T ss_pred             CCeEEEEEeeCcCcCCccc
Confidence            7777777899988887654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=4e-26  Score=169.34  Aligned_cols=138  Identities=22%  Similarity=0.249  Sum_probs=125.2

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN  101 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  101 (182)
                      +.++.++.+|++|+++++++++.+.+ +|++|+||||||...+ .++.+.+.++|+..+++|+.++++++++++|+|+++
T Consensus        49 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~  128 (254)
T 3kzv_A           49 GDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT  128 (254)
T ss_dssp             GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 9999999999998654 778899999999999999999999999999999886


Q ss_pred             CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         102 NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       102 ~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      + |+||++||..+..+.++...|+++|++++.|+++++.|+  ..+.++..+|++..|++...
T Consensus       129 ~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~  188 (254)
T 3kzv_A          129 N-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVN  188 (254)
T ss_dssp             T-CEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCC
T ss_pred             C-CeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHH
Confidence            5 999999999999999999999999999999999999997  34566677899888877643

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=8e-27  Score=176.79  Aligned_cols=159  Identities=16%  Similarity=0.098  Sum_probs=138.4

Q ss_pred             cccccccccceeccCCCC----------CCCc---eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC--
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTH---VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS--   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~---~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~--   67 (182)
                      ++|.++|+.|..+++...          ..+.   ++.++.||++|+++++++++.+.+ +|++|+||||||.....+  
T Consensus        44 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~  123 (297)
T 1xhl_A           44 VIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTA  123 (297)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCc
Confidence            456778888877764321          1233   789999999999999999999999 999999999999876666  


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-CCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-VNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      +.+.+.++|+..+++|+.+++++++++.|.|++++ |+||++||..+..+. ++...|+++|++++.|+++++.|++..+
T Consensus       124 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~g  202 (297)
T 1xhl_A          124 NTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG  202 (297)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             cccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccC
Confidence            88899999999999999999999999999998876 999999999988877 8889999999999999999999998776


Q ss_pred             cceeeeCCCcccccccc
Q psy5462         147 WGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~~  163 (182)
                      +.+++.+|++..|++..
T Consensus       203 I~v~~v~PG~v~T~~~~  219 (297)
T 1xhl_A          203 VRVNSVSPGAVATGFMG  219 (297)
T ss_dssp             CEEEEEEECCBCSSHHH
T ss_pred             eEEEEEeeCCCcCcccc
Confidence            77777899988887654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.94  E-value=1.3e-26  Score=173.05  Aligned_cols=162  Identities=15%  Similarity=0.134  Sum_probs=141.3

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+.++...-           ...+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        44 ~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~  123 (267)
T 4iiu_A           44 RQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPAL  123 (267)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccC
Confidence            46777888886643211           23456899999999999999999999999 9999999999999888888899


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHH-hCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDML-ENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++++.|. +++.++||++||..+..+.++...|+++|+++..|+++++.|++..++.+.
T Consensus       124 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  203 (267)
T 4iiu_A          124 SNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVN  203 (267)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            9999999999999999999999999887 556799999999999999999999999999999999999999987767777


Q ss_pred             eeCCCcccccccccc
Q psy5462         151 VTTPLRSVTILYQRS  165 (182)
Q Consensus       151 v~~~~~~~~~~~~~~  165 (182)
                      +.+|++..|+.....
T Consensus       204 ~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          204 CIAPGLIDTGMIEME  218 (267)
T ss_dssp             EEEECSBCSTTCCCC
T ss_pred             EEEEeeecCCccccc
Confidence            779998888876543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.94  E-value=2.4e-26  Score=172.78  Aligned_cols=161  Identities=14%  Similarity=0.041  Sum_probs=139.5

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCccc
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~~   70 (182)
                      ++|.++|+.+..+++..        .....++.++.||++|+++++++++.+.+ ++++|++|||||....    .++.+
T Consensus        46 ~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~  125 (280)
T 3nrc_A           46 KAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFID  125 (280)
T ss_dssp             HHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHH
T ss_pred             HHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCcccc
Confidence            46778888887776543        12234688999999999999999999999 9999999999998764    44555


Q ss_pred             -CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          71 -HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        71 -~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                       .+.++|+..+++|+.+++++++++.|+|+++ .++||++||.++..+.++...|+++|++++.|+++++.|++..++.+
T Consensus       126 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v  204 (280)
T 3nrc_A          126 CVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKV  204 (280)
T ss_dssp             HCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence             8999999999999999999999999998865 69999999999999999999999999999999999999999777777


Q ss_pred             eeeCCCcccccccccc
Q psy5462         150 TVTTPLRSVTILYQRS  165 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~~  165 (182)
                      .+.+|+++.|+.....
T Consensus       205 ~~v~PG~v~T~~~~~~  220 (280)
T 3nrc_A          205 NAVSAGPIKTLAASGI  220 (280)
T ss_dssp             EEEEECCCCCSGGGGC
T ss_pred             EEEeeccccchhhhcC
Confidence            8889999888776553

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.94  E-value=2.6e-27  Score=175.96  Aligned_cols=161  Identities=21%  Similarity=0.193  Sum_probs=135.0

Q ss_pred             cccccccccceeccCCCC----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc----ccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV----LAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~----~~~~~~~   75 (182)
                      ++|.++|+.+..+++..+    ..+.++.++.+|++|+++++++++.+.+++++|++|||||......+    .+.+.++
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~  106 (257)
T 3tl3_A           27 KRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAA  106 (257)
T ss_dssp             HHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHH
T ss_pred             HHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHH
Confidence            467788999888875432    23568999999999999999999987668999999999998654322    3478999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHh--------CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLE--------NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      |+..+++|+.+++++++++.|+|++        ++.|+||++||..++.+.++...|+++|++++.|+++++.|+++.++
T Consensus       107 ~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI  186 (257)
T 3tl3_A          107 FRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRI  186 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCc
Confidence            9999999999999999999999988        56789999999999988888899999999999999999999997666


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .++..+|++..|++...
T Consensus       187 ~vn~v~PG~v~T~~~~~  203 (257)
T 3tl3_A          187 RVMTIAPGLFDTPLLAS  203 (257)
T ss_dssp             EEEEEEECSBCCTTC--
T ss_pred             EEEEEEecCccChhhhh
Confidence            67777899888877654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.94  E-value=1.7e-26  Score=174.59  Aligned_cols=158  Identities=17%  Similarity=0.134  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|.++|+.|.+++...           ...+.++.++.+|++|+++++++++.+.+ +|++|+||||||.... .++.+
T Consensus        65 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~  144 (291)
T 3ijr_A           65 IAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEY  144 (291)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGG
T ss_pred             HHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCccc
Confidence            46778898887776432           23467899999999999999999999999 9999999999998754 56888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.++++++++++|+|++  .++||++||..++.+.+....|+++|++++.|+++++.|++..++.++
T Consensus       145 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  222 (291)
T 3ijr_A          145 ITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVN  222 (291)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence            899999999999999999999999999854  579999999999999999999999999999999999999997767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|+++.|++..
T Consensus       223 ~v~PG~v~T~~~~  235 (291)
T 3ijr_A          223 GVAPGPIWTPLIP  235 (291)
T ss_dssp             EEEECSBCSTHHH
T ss_pred             EEeeCCCcCCccc
Confidence            7789988887653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.94  E-value=9.1e-27  Score=173.25  Aligned_cols=161  Identities=23%  Similarity=0.220  Sum_probs=133.6

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+++...       ..+.++.++.||++|+++++++++.+.+ ++++|++|||||... ..++.+.+.+
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~  106 (261)
T 3n74_A           27 KRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPE  106 (261)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHH
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHH
Confidence            467788888887764432       2256789999999999999999999999 999999999999876 5677888999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCC----CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENN----TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +|+..+++|+.++++++++++|+|++++    .++||++||..+..+.+....|+++|++++.|+++++.|++...+.+.
T Consensus       107 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  186 (261)
T 3n74_A          107 EFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV  186 (261)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            9999999999999999999999998764    578999999999999999999999999999999999999987666667


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|+....
T Consensus       187 ~v~PG~v~t~~~~~  200 (261)
T 3n74_A          187 ALNPVAGETPLLTT  200 (261)
T ss_dssp             EEEEC---------
T ss_pred             EEecCcccChhhhh
Confidence            77888887776543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=9.4e-27  Score=176.19  Aligned_cols=156  Identities=19%  Similarity=0.158  Sum_probs=137.4

Q ss_pred             cccccccccceeccCCC------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~   69 (182)
                      ++|.++|+.|.+.+...            ...+.++.++.||++|+++++++++.+.+ +|++|++|||||... ..++.
T Consensus        67 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~  146 (294)
T 3r3s_A           67 IAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIK  146 (294)
T ss_dssp             HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGG
T ss_pred             HHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcc
Confidence            46778888887765331            12367899999999999999999999999 999999999999865 46788


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.++++++++++|+|++  +|+||++||..++.+.++...|+++|+++++|+++++.|++..++.+
T Consensus       147 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  224 (294)
T 3r3s_A          147 DLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV  224 (294)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            8999999999999999999999999999854  48999999999999999999999999999999999999999777777


Q ss_pred             eeeCCCcccccc
Q psy5462         150 TVTTPLRSVTIL  161 (182)
Q Consensus       150 ~v~~~~~~~~~~  161 (182)
                      ++.+|+++.|+.
T Consensus       225 n~v~PG~v~t~~  236 (294)
T 3r3s_A          225 NIVAPGPIWTAL  236 (294)
T ss_dssp             EEEEECSBCSHH
T ss_pred             EEEecCcCcccc
Confidence            778999888876

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.94  E-value=1.7e-26  Score=172.08  Aligned_cols=160  Identities=19%  Similarity=0.134  Sum_probs=139.2

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ....++.++.+|++|+++++++++.+.+ +|++|+||||||.....++.+.+.++
T Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~  109 (263)
T 3ak4_A           30 RALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEE  109 (263)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHH
Confidence            457778888877754321       1122678899999999999999999999 99999999999988777788899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.+++++++++.|+|++++ .++||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.+|
T Consensus       110 ~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  189 (263)
T 3ak4_A          110 WDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCP  189 (263)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEec
Confidence            999999999999999999999998877 7999999999998888889999999999999999999999876677777789


Q ss_pred             Ccccccccc
Q psy5462         155 LRSVTILYQ  163 (182)
Q Consensus       155 ~~~~~~~~~  163 (182)
                      ++..++...
T Consensus       190 g~v~t~~~~  198 (263)
T 3ak4_A          190 GFVKTAMQE  198 (263)
T ss_dssp             CSBTTHHHH
T ss_pred             ccccChhhh
Confidence            988877643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.94  E-value=1.5e-26  Score=170.39  Aligned_cols=158  Identities=14%  Similarity=0.040  Sum_probs=138.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-c--CCccEEEEcccCCCCCCc-ccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-I--GYVDILINNAGIVASSSV-LAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~--~~id~li~~ag~~~~~~~-~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++..........++.+|++|+++++++++.+.+ +  +++|++|||||.....++ .+.+.++|+..
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~  104 (241)
T 1dhr_A           25 QAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLM  104 (241)
T ss_dssp             HHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHH
T ss_pred             HHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHH
Confidence            4678889999888776555445677889999999999999999998 8  799999999998877777 77889999999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC--CCccceeeeCCCcc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG--YMLWGTTVTTPLRS  157 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~~~i~v~~~~~~  157 (182)
                      +++|+.+++.+++++.|+|++  +|+||++||..++.+.++...|+++|++++.|+++++.|++  ..++.+++.+|++.
T Consensus       105 ~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v  182 (241)
T 1dhr_A          105 WKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL  182 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred             HHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc
Confidence            999999999999999999865  48999999999998888999999999999999999999998  66667777789988


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|++..
T Consensus       183 ~T~~~~  188 (241)
T 1dhr_A          183 DTPMNR  188 (241)
T ss_dssp             ECHHHH
T ss_pred             cCcccc
Confidence            877643

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.94  E-value=2.4e-26  Score=173.42  Aligned_cols=158  Identities=14%  Similarity=0.120  Sum_probs=133.7

Q ss_pred             cccccccccceeccCCC-C-----------CCCceeEEEEccCCC----HHHHHHHHHHHHh-cCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCL-P-----------TKTHVAVYFKADVSD----KAEIKKLNENVRK-IGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-~-----------~~~~~~~~~~~D~s~----~~~~~~~~~~~~~-~~~id~li~~ag~~~~~   66 (182)
                      ++|.++|+.|..+++.. .           ..+.++.++.||++|    +++++++++.+.+ ++++|+||||||.....
T Consensus        41 ~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~  120 (288)
T 2x9g_A           41 VKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPT  120 (288)
T ss_dssp             HHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             HHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            45677888888776543 1           235678999999999    9999999999999 99999999999987766


Q ss_pred             Cc-----cc-----CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccccccccCCCchhhhhHHH
Q psy5462          67 SV-----LA-----HTDHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIAALTAAVNVSAYFASKYG  130 (182)
Q Consensus        67 ~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~~~~~~~~~~~y~~sKaa  130 (182)
                      ++     .+     .+.++|+..+++|+.++++++++++|+|++++      .++||++||..+..+.++...|+++|++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  200 (288)
T 2x9g_A          121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA  200 (288)
T ss_dssp             CSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             ccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHH
Confidence            66     56     78899999999999999999999999998766      6899999999998888999999999999


Q ss_pred             HHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         131 VTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       131 ~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +..|+++++.|++..++.+++.+|++..+++
T Consensus       201 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          201 LVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             HHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            9999999999998766667777898888776

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.94  E-value=1.4e-26  Score=171.51  Aligned_cols=157  Identities=21%  Similarity=0.171  Sum_probs=120.6

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC---CCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV---ASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~---~~~~~~   69 (182)
                      ++|.++|+.+..+++..          ...+.++.++.||++|+++++++++.+.+ ++++|++|||||..   ...++.
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~  106 (253)
T 3qiv_A           27 EALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLL  106 (253)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTT
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccc
Confidence            56778888887776432          12367899999999999999999999999 99999999999984   345677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.++++++++++|.|++++.++||++||..++   ++...|+++|++++.|+++++.|++...+.+
T Consensus       107 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  183 (253)
T 3qiv_A          107 TIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRI  183 (253)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHHHHHHHHHHHHTTTTTEEE
T ss_pred             cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            8899999999999999999999999999998888999999998876   3457899999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      .+.+|++..++...
T Consensus       184 ~~v~PG~v~t~~~~  197 (253)
T 3qiv_A          184 NAIAPGPIDTEANR  197 (253)
T ss_dssp             EEEEC---------
T ss_pred             EEEEecCCcccchh
Confidence            77789888777554

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=4.6e-26  Score=167.77  Aligned_cols=141  Identities=24%  Similarity=0.353  Sum_probs=129.2

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN  102 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  102 (182)
                      +.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|+..+++|+.+++++++++.|+|++++
T Consensus        57 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  136 (244)
T 2bd0_A           57 GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH  136 (244)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            56889999999999999999999999 99999999999998777888899999999999999999999999999998877


Q ss_pred             CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         103 TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       103 ~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .++||++||..++.+.++...|+++|++++.++++++.|++..++.+.+..|++..++....
T Consensus       137 ~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  198 (244)
T 2bd0_A          137 SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK  198 (244)
T ss_dssp             CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred             CCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh
Confidence            89999999999988888899999999999999999999998776777777888887776543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=4.4e-26  Score=171.54  Aligned_cols=158  Identities=20%  Similarity=0.195  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++...           ..+.++.++.||++|++++.++++.+.+ ++++|+||||||.....++.+.
T Consensus        47 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~  126 (283)
T 1g0o_A           47 MELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV  126 (283)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccC
Confidence            456778888877654321           2356789999999999999999999999 9999999999999877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.|+|  ++.|+||++||..+..+.++ ...|+++|++++.|+++++.|++..++.++
T Consensus       127 ~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  204 (283)
T 1g0o_A          127 TPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVN  204 (283)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            999999999999999999999999998  34689999999998877654 889999999999999999999987767777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +.+|++..+++..
T Consensus       205 ~v~PG~v~t~~~~  217 (283)
T 1g0o_A          205 VVAPGGIKTDMYH  217 (283)
T ss_dssp             EEEECCBSSHHHH
T ss_pred             EEecCcccchhhh
Confidence            7799988887643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.94  E-value=7.7e-26  Score=167.06  Aligned_cols=160  Identities=25%  Similarity=0.264  Sum_probs=139.3

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC---c
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS---V   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~---~   68 (182)
                      ++|.++|+.+..+++..           ...+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....+   +
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~   99 (250)
T 2cfc_A           20 TRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVL   99 (250)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchh
Confidence            45677888877775432           23356789999999999999999999999 999999999999876555   7


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.+.++|+..+++|+.++++++++++|.|++++.++||++||..+..+.++...|+++|++++.++++++.|++..++.
T Consensus       100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~  179 (250)
T 2cfc_A          100 HTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR  179 (250)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            88899999999999999999999999999998878999999999998888889999999999999999999999876667


Q ss_pred             eeeeCCCcccccccc
Q psy5462         149 TTVTTPLRSVTILYQ  163 (182)
Q Consensus       149 i~v~~~~~~~~~~~~  163 (182)
                      +++.+|++..++...
T Consensus       180 v~~v~Pg~v~t~~~~  194 (250)
T 2cfc_A          180 CNAVCPGMIETPMTQ  194 (250)
T ss_dssp             EEEEEECSBCSTTTH
T ss_pred             EEEEEeCcCccCccc
Confidence            777788887777643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=1.8e-26  Score=172.96  Aligned_cols=156  Identities=14%  Similarity=0.092  Sum_probs=131.2

Q ss_pred             cccccccccceeccC-CCCC----------C-CceeEEEEccCCCH----HHHHHHHHHHHh-cCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPW-CLPT----------K-THVAVYFKADVSDK----AEIKKLNENVRK-IGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~~~~----------~-~~~~~~~~~D~s~~----~~~~~~~~~~~~-~~~id~li~~ag~~~~~   66 (182)
                      ++|.++|+.|..+++ ....          . +.++.++.||++|+    ++++++++.+.+ +|++|+||||||.....
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~  108 (276)
T 1mxh_A           29 VRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPT  108 (276)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             HHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence            457778888887765 2210          1 56789999999999    999999999998 99999999999988777


Q ss_pred             CcccCCH-----------HHHHHHHHHHhHHHHHHHHHHhHHHHhCCC------CeEEEEeccccccccCCCchhhhhHH
Q psy5462          67 SVLAHTD-----------HEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAYFASKY  129 (182)
Q Consensus        67 ~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~ii~iss~~~~~~~~~~~~y~~sKa  129 (182)
                      ++.+.+.           ++|+..+++|+.+++++++++.|+|. ++.      ++||++||..++.+.++...|+++|+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  187 (276)
T 1mxh_A          109 PLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH  187 (276)
T ss_dssp             CSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECchhhcCCCCCCeehHHHHH
Confidence            7777888           99999999999999999999999997 555      89999999999988899999999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +++.|+++++.|++..++.+++.+|++..++
T Consensus       188 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          188 ALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            9999999999999876667777788887776

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.94  E-value=8.8e-26  Score=168.39  Aligned_cols=159  Identities=13%  Similarity=0.085  Sum_probs=137.9

Q ss_pred             cccccccccceeccCCCC----------CCC-ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC----CCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKT-HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA----SSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~-~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~----~~~   67 (182)
                      ++|.++|+.+..+.+...          ..+ .++.++.||++|+++++++++.+.+ ++++|++|||||...    ..+
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~  106 (266)
T 3oig_A           27 RSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGE  106 (266)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSC
T ss_pred             HHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccc
Confidence            467778888877653321          112 3799999999999999999999999 999999999999876    466


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|+..+++|+.+++++++++.|+|++  .|+||++||..+..+.++...|+++|++++.|+++++.|++..++
T Consensus       107 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi  184 (266)
T 3oig_A          107 YLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENI  184 (266)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             hhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence            788899999999999999999999999999864  589999999999999999999999999999999999999997767


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+.+.+|++..|+....
T Consensus       185 ~v~~v~PG~v~T~~~~~  201 (266)
T 3oig_A          185 RVNSISAGPIRTLSAKG  201 (266)
T ss_dssp             EEEEEEECCCCSGGGTT
T ss_pred             EEEEEecCccccccccc
Confidence            77777999888876654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.94  E-value=3e-26  Score=175.90  Aligned_cols=158  Identities=14%  Similarity=0.122  Sum_probs=137.1

Q ss_pred             cccccccccceecc-CCCC-----------CCCceeEEEEccCCCHH-----------------HHHHHHHHHHh-cCCc
Q psy5462           4 DRTTGHIHGILFIP-WCLP-----------TKTHVAVYFKADVSDKA-----------------EIKKLNENVRK-IGYV   53 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~~-----------~~~~~~~~~~~D~s~~~-----------------~~~~~~~~~~~-~~~i   53 (182)
                      ++|+++|+.|..++ +...           ..+.++.++.||++|++                 +++++++.+.+ ++++
T Consensus        64 ~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~i  143 (328)
T 2qhx_A           64 EGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRC  143 (328)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCC
Confidence            45677888887766 3321           23567899999999999                 99999999999 9999


Q ss_pred             cEEEEcccCCCCCCcccCC--------------HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC------CCeEEEEeccc
Q psy5462          54 DILINNAGIVASSSVLAHT--------------DHEIERIMDVNLMSNIKMVREFLPDMLENN------TGHIVCISSIA  113 (182)
Q Consensus        54 d~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~iss~~  113 (182)
                      |+||||||.....++.+.+              .++|+..+++|+.++++++++++|+|++++      .++||++||..
T Consensus       144 D~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~  223 (328)
T 2qhx_A          144 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  223 (328)
T ss_dssp             CEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTT
T ss_pred             CEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchh
Confidence            9999999988777777788              899999999999999999999999998876      79999999999


Q ss_pred             cccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         114 ALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       114 ~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +..+.++...|+++|++++.|+++|+.|++..++.+++.+|+++.|++
T Consensus       224 ~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          224 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             hccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            998888999999999999999999999998766677777899888876

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.8e-26  Score=168.32  Aligned_cols=158  Identities=12%  Similarity=0.041  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-c--CCccEEEEcccCCCCCCc-ccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-I--GYVDILINNAGIVASSSV-LAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~--~~id~li~~ag~~~~~~~-~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++..........++.+|++|+++++++++.+.+ +  +++|+||||||.....++ .+.+.++|+..
T Consensus        21 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~  100 (236)
T 1ooe_A           21 EFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLM  100 (236)
T ss_dssp             HHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH
T ss_pred             HHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHH
Confidence            4677889999888876655445677889999999999999999998 8  799999999998776677 67788999999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC--CCccceeeeCCCcc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG--YMLWGTTVTTPLRS  157 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~~~i~v~~~~~~  157 (182)
                      +++|+.+++++++++.|+|++  .|+||++||..++.+.++...|+++|++++.|+++++.|++  ..++.+++.+|++.
T Consensus       101 ~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v  178 (236)
T 1ooe_A          101 IKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL  178 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred             HHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcc
Confidence            999999999999999999865  48999999999998889999999999999999999999997  66667777789988


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .++...
T Consensus       179 ~t~~~~  184 (236)
T 1ooe_A          179 DTPMNR  184 (236)
T ss_dssp             CCHHHH
T ss_pred             cCcchh
Confidence            777643

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=6.5e-26  Score=170.78  Aligned_cols=159  Identities=18%  Similarity=0.142  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.|..+++...         ...+++.++.||++|+++++++++.+.+ +|++|+||||||....    .++.
T Consensus        41 ~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~  120 (285)
T 2p91_A           41 KSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVI  120 (285)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGG
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcc
Confidence            457778888887764431         1112478899999999999999999999 9999999999998754    5677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++++++.|+|+++ +|+||++||..+..+.++...|+++|++++.|+++++.|+++.++.+
T Consensus       121 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  199 (285)
T 2p91_A          121 DTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRI  199 (285)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            88999999999999999999999999999754 58999999999988888899999999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ++.+|++..|+...
T Consensus       200 ~~v~PG~v~t~~~~  213 (285)
T 2p91_A          200 NAISAGPVKTLAAY  213 (285)
T ss_dssp             EEEEECCCCCSCC-
T ss_pred             EEEEeCcccCchhh
Confidence            77899988887653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.94  E-value=1e-25  Score=166.24  Aligned_cols=159  Identities=16%  Similarity=0.199  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCCC----------C-CCceeEEEEccC--CCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T-KTHVAVYFKADV--SDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~-~~~~~~~~~~D~--s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~   68 (182)
                      ++|.++|+.+..+++...          . ...++.++.+|+  +|.++++++++.+.+ ++++|++|||||... ..++
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~  111 (247)
T 3i1j_A           32 RAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPL  111 (247)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCG
T ss_pred             HHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCc
Confidence            467788888877764321          1 224566777776  999999999999999 999999999999864 4678


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC-Ccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY-MLW  147 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~-~~~  147 (182)
                      .+.+.++|+..+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++++.|+++++.|++. ..+
T Consensus       112 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i  191 (247)
T 3i1j_A          112 EQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAV  191 (247)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCe
Confidence            8899999999999999999999999999999888899999999999999999999999999999999999999975 556


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      .++..+|++..|++.
T Consensus       192 ~v~~v~PG~v~t~~~  206 (247)
T 3i1j_A          192 RANSINPGATRTGMR  206 (247)
T ss_dssp             EEEEEECCCCSSHHH
T ss_pred             EEEEEecCcccCccc
Confidence            666778998888764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.94  E-value=4.8e-26  Score=171.24  Aligned_cols=158  Identities=23%  Similarity=0.191  Sum_probs=133.2

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC-Ccc----c
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS-SVL----A   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~-~~~----~   70 (182)
                      ++|.++|+.|...++...       ..+.++.++.||++|+++++++++.+.+ +|++|+||||||..... .+.    +
T Consensus        23 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~  102 (281)
T 3zv4_A           23 DRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPED  102 (281)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTT
T ss_pred             HHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChh
Confidence            567788988888764321       2356899999999999999999999999 99999999999986532 222    3


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+.++++|+.++++++++++|+|.+++ |+||++||..+..+.++...|+++|+++.+|+++++.|+++. +.++
T Consensus       103 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn  180 (281)
T 3zv4_A          103 KIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVN  180 (281)
T ss_dssp             THHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEE
T ss_pred             hhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEE
Confidence            45678999999999999999999999998764 899999999999999999999999999999999999999875 6777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      ..+|++..|++..
T Consensus       181 ~v~PG~v~T~~~~  193 (281)
T 3zv4_A          181 GVAPGGMNTDLRG  193 (281)
T ss_dssp             EEEECSSCC--CC
T ss_pred             EEECCcCcCCccc
Confidence            7799988887654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.94  E-value=2.2e-26  Score=169.20  Aligned_cols=159  Identities=16%  Similarity=0.164  Sum_probs=137.6

Q ss_pred             cccccccccceeccCCCCCCC--ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT--HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+++......  ..+.++.+|++| ++++++++.+.+ ++++|++|||||.....++.+.+.++|+..+
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~   98 (239)
T 2ekp_A           20 EALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVL   98 (239)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence            457778988887765432100  017789999999 999999999988 9999999999998877788889999999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc--CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA--VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~--~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++|+.++++++++++|+|++++.++||++||..++.+.  ++...|+++|++++.|+++++.|+++.++.+++.+|++..
T Consensus        99 ~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  178 (239)
T 2ekp_A           99 YLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVE  178 (239)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCcc
Confidence            99999999999999999998878999999999988877  7889999999999999999999998776777777999888


Q ss_pred             ccccc
Q psy5462         159 TILYQ  163 (182)
Q Consensus       159 ~~~~~  163 (182)
                      |++..
T Consensus       179 t~~~~  183 (239)
T 2ekp_A          179 TEFTL  183 (239)
T ss_dssp             SGGGH
T ss_pred             Cchhh
Confidence            87654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=3.3e-26  Score=171.28  Aligned_cols=161  Identities=24%  Similarity=0.190  Sum_probs=134.0

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~   70 (182)
                      ++|+++|+.+.+....           +...+.++.++.||++|+++++++++.+.+ ++++|+||||||.... .++.+
T Consensus        44 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~  123 (272)
T 4e3z_A           44 RLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDE  123 (272)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhh
Confidence            4677888888665211           123467899999999999999999999999 9999999999998765 77888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC---CCCeEEEEeccccccccC-CCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLEN---NTGHIVCISSIAALTAAV-NVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .+.++|+..+++|+.++++++++++|.|++.   +.++||++||.++..+.+ ....|+++|++++.|+++++.|++..+
T Consensus       124 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  203 (272)
T 4e3z_A          124 MSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG  203 (272)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999763   468999999999887765 678899999999999999999998776


Q ss_pred             cceeeeCCCccccccccc
Q psy5462         147 WGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~~~  164 (182)
                      +.+.+.+|++..|+....
T Consensus       204 i~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          204 IRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             EEEEEEEECSBC------
T ss_pred             cEEEEEecCCCcCCcccc
Confidence            777777999888876543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=4.1e-26  Score=171.09  Aligned_cols=159  Identities=13%  Similarity=0.161  Sum_probs=137.1

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.|..+++...         ...+++.++.+|++|+++++++++.+.+ +|++|+||||||....    .++.
T Consensus        26 ~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~  105 (275)
T 2pd4_A           26 QSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL  105 (275)
T ss_dssp             HHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcc
Confidence            467788998888765432         0112478999999999999999999999 9999999999998764    5677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++++++.|+|++  +|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+
T Consensus       106 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  183 (275)
T 2pd4_A          106 ETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV  183 (275)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            8899999999999999999999999999864  48999999999988888999999999999999999999998776777


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      ++.+|++..|+....
T Consensus       184 ~~v~PG~v~T~~~~~  198 (275)
T 2pd4_A          184 NALSAGPIRTLASSG  198 (275)
T ss_dssp             EEEEECCCCCTTGGG
T ss_pred             EEEeeCccccchhhh
Confidence            777999888876543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=3.2e-26  Score=170.73  Aligned_cols=158  Identities=20%  Similarity=0.149  Sum_probs=133.8

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++...       ....++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~  103 (263)
T 2a4k_A           24 DLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA  103 (263)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHH
Confidence            456778888877764321       1235788999999999999999999999 99999999999998777888899999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++++++++.|+| ++ .|+||++||..++ +.++...|+++|++++.|+++++.|++..++.+++.+|+
T Consensus       104 ~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  180 (263)
T 2a4k_A          104 WEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG  180 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEEC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeC
Confidence            99999999999999999999999 54 7999999999988 777789999999999999999999999777777778999


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|+....
T Consensus       181 ~v~t~~~~~  189 (263)
T 2a4k_A          181 LIQTPMTAG  189 (263)
T ss_dssp             SBCCGGGTT
T ss_pred             cCcCchhhh
Confidence            888877543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=5.8e-26  Score=174.21  Aligned_cols=160  Identities=21%  Similarity=0.260  Sum_probs=134.4

Q ss_pred             cccccccccceeccCCCC----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.+..+.....                ..+.++.++.+|++|+++++++++.+. ++++|+||||||....++
T Consensus        20 ~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~-~g~iD~lVnnAG~~~~~~   98 (327)
T 1jtv_A           20 VRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-EGRVDVLVCNAGLGLLGP   98 (327)
T ss_dssp             HHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-TSCCSEEEECCCCCCCSC
T ss_pred             HHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh-cCCCCEEEECCCcCCCCc
Confidence            456777887666542211                113578999999999999999998874 578999999999887778


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|+.++++|+.++++++++++|+|++++.++||++||..+..+.+....|++||++++.|+++++.|++..++
T Consensus        99 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI  178 (327)
T 1jtv_A           99 LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV  178 (327)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence            88899999999999999999999999999999877899999999999988888999999999999999999999987777


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+++.+|+++.|++...
T Consensus       179 ~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          179 HLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             EEEEEEECCBCC-----
T ss_pred             EEEEEEeCcccChHHhh
Confidence            77788999888877543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.93  E-value=4.2e-26  Score=170.31  Aligned_cols=160  Identities=15%  Similarity=0.109  Sum_probs=134.0

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.+..+++...         ...+++.++.||++|+++++++++.+.+ ++++|++|||||....    +++.
T Consensus        34 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~  113 (271)
T 3ek2_A           34 KACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFL  113 (271)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTT
T ss_pred             HHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccc
Confidence            467788888877754311         1234588999999999999999999999 9999999999998764    5555


Q ss_pred             c-CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          70 A-HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        70 ~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      + .+.++|+..+++|+.+++++++++.|+|++  .|+||++||.++..+.++...|+++|++++.|+++++.|++..++.
T Consensus       114 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  191 (271)
T 3ek2_A          114 DGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVR  191 (271)
T ss_dssp             TTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             cccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcE
Confidence            5 899999999999999999999999999874  5899999999999999999999999999999999999999877777


Q ss_pred             eeeeCCCcccccccccc
Q psy5462         149 TTVTTPLRSVTILYQRS  165 (182)
Q Consensus       149 i~v~~~~~~~~~~~~~~  165 (182)
                      +.+.+|++..|++....
T Consensus       192 v~~v~PG~v~T~~~~~~  208 (271)
T 3ek2_A          192 VNAISAGPIKTLAASGI  208 (271)
T ss_dssp             EEEEEECCC-----CCC
T ss_pred             EEEEecCcccchhhhcc
Confidence            77889999888776553

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.93  E-value=5.7e-26  Score=166.36  Aligned_cols=160  Identities=19%  Similarity=0.151  Sum_probs=133.3

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.+..+++....      .-.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.++|
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~  102 (234)
T 2ehd_A           23 RLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEW  102 (234)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHH
Confidence            4567788888777643211      012678999999999999999999998 999999999999887777888999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +..+++|+.+++++++.+++.|++++.++||++||..++.+.++...|+++|++++.++++++.|++..++.+++..|++
T Consensus       103 ~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  182 (234)
T 2ehd_A          103 RLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGS  182 (234)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Confidence            99999999999999999999999887899999999999888888999999999999999999999987666777778988


Q ss_pred             ccccccc
Q psy5462         157 SVTILYQ  163 (182)
Q Consensus       157 ~~~~~~~  163 (182)
                      ..++...
T Consensus       183 v~t~~~~  189 (234)
T 2ehd_A          183 VDTGFAG  189 (234)
T ss_dssp             -------
T ss_pred             CcCCccc
Confidence            7776543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.93  E-value=1.6e-25  Score=166.36  Aligned_cols=160  Identities=20%  Similarity=0.159  Sum_probs=139.8

Q ss_pred             cccccccccceeccC-CCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPW-CLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+++ ...          ..+.++.++.+|++|++++.++++.+.+ ++++|+||||||.....++.+.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~  104 (261)
T 1gee_A           25 IRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM  104 (261)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccC
Confidence            456777888877765 211          1256788999999999999999999998 9999999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++++.|++++ .++||++||..+..+.++...|+++|++++.++++++.|++...+.++
T Consensus       105 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  184 (261)
T 1gee_A          105 SLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVN  184 (261)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            9999999999999999999999999999876 789999999999888889999999999999999999999987667777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       185 ~v~Pg~v~t~~~~  197 (261)
T 1gee_A          185 NIGPGAINTPINA  197 (261)
T ss_dssp             EEEECSBCSGGGH
T ss_pred             EEeeCCcCCchhh
Confidence            8899988877654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=2.3e-26  Score=173.18  Aligned_cols=157  Identities=20%  Similarity=0.238  Sum_probs=133.6

Q ss_pred             cccccccccceeccCC----------------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcc
Q psy5462           4 DRTTGHIHGILFIPWC----------------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNA   60 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~a   60 (182)
                      ++|.++|+.|..++..                      +...+.++.++.||++|+++++++++.+.+ +|++|+|||||
T Consensus        28 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA  107 (287)
T 3pxx_A           28 VKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA  107 (287)
T ss_dssp             HHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             HHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4677888888877543                      112356899999999999999999999999 99999999999


Q ss_pred             cCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHH
Q psy5462          61 GIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKY  129 (182)
Q Consensus        61 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKa  129 (182)
                      |..... . +.+.++|+..+++|+.++++++++++|+|  .+.++||++||..++.+.           ++...|+++|+
T Consensus       108 g~~~~~-~-~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~  183 (287)
T 3pxx_A          108 GICPLG-A-HLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQ  183 (287)
T ss_dssp             CCCCCC-T-TCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHH
T ss_pred             CcCccc-C-cCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcccccccccccccCCCccchHHHHHH
Confidence            987655 2 37889999999999999999999999998  346899999999887655           56789999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +++.|+++++.|+++.++.+++.+|+++.|++...
T Consensus       184 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          184 LVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            99999999999999776777777999988887653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=6e-26  Score=169.81  Aligned_cols=159  Identities=18%  Similarity=0.232  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+++....      .-.++.++.||++|+++++++++.+.+ +|++|++|||||.... .++.+.+.++
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~  106 (270)
T 1yde_A           27 RAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG  106 (270)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHH
Confidence            4677788888777643210      112478899999999999999999999 9999999999998753 6788889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.+++++++++.|+|+++ .++||++||..+..+.+....|+++|++++.++++++.|+++.++.+++.+|+
T Consensus       107 ~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg  185 (270)
T 1yde_A          107 FRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPG  185 (270)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeC
Confidence            99999999999999999999999765 58999999999888888899999999999999999999998776777778999


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..++...
T Consensus       186 ~v~t~~~~  193 (270)
T 1yde_A          186 NIWTPLWE  193 (270)
T ss_dssp             SBCCHHHH
T ss_pred             ccccchhh
Confidence            88887643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=5.1e-26  Score=166.74  Aligned_cols=158  Identities=15%  Similarity=0.161  Sum_probs=134.7

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+...++...           ..+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        20 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~   99 (235)
T 3l77_A           20 RALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEEL   99 (235)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTS
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccC
Confidence            467788888877764321           2356899999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.++++++++++|+|++ +.+++|+++|..+..+.+....|+++|+++++|+++++.+  ...+.+..
T Consensus       100 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~--~~~i~v~~  176 (235)
T 3l77_A          100 SEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFE  176 (235)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTSEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHHhhc--CCCeEEEE
Confidence            99999999999999999999999999954 4589999999998888888999999999999999999555  44566777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       177 v~PG~v~T~~~~~  189 (235)
T 3l77_A          177 LRPGAVDTYFGGS  189 (235)
T ss_dssp             EEECSBSSSTTTC
T ss_pred             EeCCccccccccc
Confidence            7888888876544

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.93  E-value=6.3e-26  Score=168.88  Aligned_cols=158  Identities=15%  Similarity=0.117  Sum_probs=135.2

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.|..+++...         ...+.+.++.+|++|+++++++++.+.+ +|++|+||||||....    .++.
T Consensus        28 ~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~  107 (261)
T 2wyu_A           28 AKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI  107 (261)
T ss_dssp             HHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGG
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcc
Confidence            456778888877764321         1112378899999999999999999999 9999999999998753    5677


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++++++.|+|++  .|+||++||..+..+.++...|+++|++++.++++++.|++..++.+
T Consensus       108 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  185 (261)
T 2wyu_A          108 DTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV  185 (261)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence            8899999999999999999999999999864  48999999999988888899999999999999999999998776777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      ++.+|++..++...
T Consensus       186 ~~v~Pg~v~t~~~~  199 (261)
T 2wyu_A          186 NAISAGPVRTVAAR  199 (261)
T ss_dssp             EEEEECCCCCTGGG
T ss_pred             EEEeeCCCcCchhh
Confidence            77799988887654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.93  E-value=1.4e-25  Score=165.18  Aligned_cols=160  Identities=19%  Similarity=0.225  Sum_probs=139.1

Q ss_pred             cccccccccceec-cCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFI-PWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+ .+..          ...+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        19 ~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~   98 (244)
T 1edo_A           19 LSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM   98 (244)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccC
Confidence            4577788888774 3221          11256788999999999999999999999 9999999999999877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++.|+|++++.++||++||..+..+.++...|+++|++++.++++++.|+....+.+++
T Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  178 (244)
T 1edo_A           99 KKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV  178 (244)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEE
Confidence            99999999999999999999999999988778999999999888888889999999999999999999999876677777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       179 v~Pg~v~t~~~~  190 (244)
T 1edo_A          179 VCPGFIASDMTA  190 (244)
T ss_dssp             EEECSBCSHHHH
T ss_pred             EeeCccccchhh
Confidence            889888777654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.93  E-value=2.3e-25  Score=165.79  Aligned_cols=160  Identities=26%  Similarity=0.307  Sum_probs=136.2

Q ss_pred             cccccccccceeccCCCCCC-------CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcc------
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-------THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVL------   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-------~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~------   69 (182)
                      ++|.++|+.+..+++.....       +.++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.      
T Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~  109 (265)
T 2o23_A           30 ERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQ  109 (265)
T ss_dssp             HHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTE
T ss_pred             HHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccC
Confidence            46778899888877554321       45789999999999999999999999 99999999999987665444      


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.+.++|+..+++|+.+++++++++.|+|+++      +.++||++||..++.+.++...|+++|++++.++++++.|++
T Consensus       110 ~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  189 (265)
T 2o23_A          110 THTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA  189 (265)
T ss_dssp             ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999887      678999999999988888899999999999999999999998


Q ss_pred             CCccceeeeCCCcccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~  163 (182)
                      ...+.+++.+|++..++...
T Consensus       190 ~~gi~v~~v~Pg~v~t~~~~  209 (265)
T 2o23_A          190 PIGIRVMTIAPGLFGTPLLT  209 (265)
T ss_dssp             GGTEEEEEEEECCBCCC---
T ss_pred             hcCcEEEEEEeccccCcccc
Confidence            76667777788888777654

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=9.4e-26  Score=166.53  Aligned_cols=157  Identities=23%  Similarity=0.218  Sum_probs=131.9

Q ss_pred             cccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.|..+++....     .-.++.++.+|++|+++++++++.   ++++|++|||||.....++.+.+.++|+.
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~id~lv~~Ag~~~~~~~~~~~~~~~~~  100 (246)
T 2ag5_A           24 LAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE---VERLDVLFNVAGFVHHGTVLDCEEKDWDF  100 (246)
T ss_dssp             HHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH---CSCCSEEEECCCCCCCBCGGGCCHHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHH---hCCCCEEEECCccCCCCCcccCCHHHHHH
Confidence            4577788888777543210     112688999999999998844332   68999999999998777888899999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-CCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .+++|+.++++++++++|+|++++.++||++||..+..+.+ +...|+++|++++.++++++.|+++.++.+++.+|++.
T Consensus       101 ~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  180 (246)
T 2ag5_A          101 SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTV  180 (246)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcC
Confidence            99999999999999999999888789999999999887777 88999999999999999999999877677777789988


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .++...
T Consensus       181 ~t~~~~  186 (246)
T 2ag5_A          181 DTPSLQ  186 (246)
T ss_dssp             ECHHHH
T ss_pred             cCcchh
Confidence            777643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.93  E-value=9e-26  Score=168.35  Aligned_cols=159  Identities=13%  Similarity=0.058  Sum_probs=135.1

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.|..+++...         ...+...++.+|++|+++++++++.+.+ ++++|+||||||....    .++.
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~  108 (265)
T 1qsg_A           29 QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV  108 (265)
T ss_dssp             HHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHH
T ss_pred             HHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCcc
Confidence            467788998887765431         0112347899999999999999999999 9999999999998753    5667


Q ss_pred             c-CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          70 A-HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        70 ~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      + .+.++|+..+++|+.+++++++++.|+|++  .|+||++||..++.+.++...|+++|++++.|+++++.|++..++.
T Consensus       109 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~  186 (265)
T 1qsg_A          109 NAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR  186 (265)
T ss_dssp             HHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            7 899999999999999999999999999864  4899999999998888889999999999999999999999877677


Q ss_pred             eeeeCCCccccccccc
Q psy5462         149 TTVTTPLRSVTILYQR  164 (182)
Q Consensus       149 i~v~~~~~~~~~~~~~  164 (182)
                      +++.+|++..|+....
T Consensus       187 v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          187 VNAISAGPIRTLAASG  202 (265)
T ss_dssp             EEEEEECCCCCTTGGG
T ss_pred             EEEEEeCCCccchhhc
Confidence            7777999888876543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=1e-25  Score=166.09  Aligned_cols=160  Identities=22%  Similarity=0.224  Sum_probs=117.7

Q ss_pred             cccccccccceecc-CCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIP-WCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+. +...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        23 ~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~  102 (247)
T 2hq1_A           23 WKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKM  102 (247)
T ss_dssp             HHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC-----------
T ss_pred             HHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccC
Confidence            45777888888773 2221          1256789999999999999999999988 9999999999998877777788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++.+.|++++.++||++||..+..+.++...|+++|++++.++++++.|++...+.+++
T Consensus       103 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  182 (247)
T 2hq1_A          103 SEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNA  182 (247)
T ss_dssp             ----CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence            88999999999999999999999999988778999999999888888889999999999999999999999876667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       183 v~Pg~v~t~~~~  194 (247)
T 2hq1_A          183 VAPGIIKTDMTD  194 (247)
T ss_dssp             EEECSBCCHHHH
T ss_pred             EEEEEEeccchh
Confidence            788887776543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=4.4e-26  Score=187.13  Aligned_cols=155  Identities=20%  Similarity=0.240  Sum_probs=130.8

Q ss_pred             cccccccccceeccCC-C-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWC-L-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|.+.+.. .       ...+.++..+.+|++  ++.+++++.+.+ ||++|+||||||+....++.+++.+
T Consensus       340 ~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~  417 (604)
T 2et6_A          340 KWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQ  417 (604)
T ss_dssp             HHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHH
T ss_pred             HHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHH
Confidence            4577889888776532 1       123567778888884  456678888888 9999999999999877888999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.++++|+.++++++++++|+|++++.|+||++||.++..+.++...|++||+|+.+|+++|+.|+++.++.++.++|
T Consensus       418 ~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~P  497 (604)
T 2et6_A          418 EWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP  497 (604)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcC
Confidence            99999999999999999999999998888999999999999998999999999999999999999999976555666677


Q ss_pred             Ccccccc
Q psy5462         155 LRSVTIL  161 (182)
Q Consensus       155 ~~~~~~~  161 (182)
                      +. .|.+
T Consensus       498 G~-~T~m  503 (604)
T 2et6_A          498 HA-ETAM  503 (604)
T ss_dssp             CC-CCCC
T ss_pred             CC-CCcc
Confidence            74 4444

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.93  E-value=3.1e-25  Score=167.11  Aligned_cols=160  Identities=25%  Similarity=0.253  Sum_probs=137.4

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|....+..          ...+.++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+.+
T Consensus        62 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~  141 (285)
T 2c07_A           62 KMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMK  141 (285)
T ss_dssp             HHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCC
T ss_pred             HHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCC
Confidence            45677888877765321          12356789999999999999999999999 99999999999998777888899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++++++++.+.|++++.++||++||..+..+.++...|+++|++++.++++++.|++..++.+++.
T Consensus       142 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  221 (285)
T 2c07_A          142 NDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI  221 (285)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEE
Confidence            99999999999999999999999999887789999999999888888899999999999999999999998766777777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       222 ~Pg~v~t~~~~  232 (285)
T 2c07_A          222 APGFISSDMTD  232 (285)
T ss_dssp             EECSBCC----
T ss_pred             EeCcEecCchh
Confidence            88888777654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.8e-25  Score=165.31  Aligned_cols=160  Identities=23%  Similarity=0.219  Sum_probs=135.9

Q ss_pred             cccccccccceeccCC----------CCCCC-------ceeEEEEccCCCHHHHHHHHHHHHh-cCCc-cEEEEcccCCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKT-------HVAVYFKADVSDKAEIKKLNENVRK-IGYV-DILINNAGIVA   64 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~-------~~~~~~~~D~s~~~~~~~~~~~~~~-~~~i-d~li~~ag~~~   64 (182)
                      ++|.++|+.|..+++.          +...+       .++.++.+|++|+++++++++.+.+ ++++ |++|||||...
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~  104 (264)
T 2pd6_A           25 VRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQ  104 (264)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCC
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCC
Confidence            4567778887776532          22222       5788999999999999999999998 9998 99999999987


Q ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          65 SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ..++.+.+.++|+..+++|+.+++++++++.|.|.+++ .++||++||..+..+.++...|+++|++++.++++++.|++
T Consensus       105 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  184 (264)
T 2pd6_A          105 DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG  184 (264)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhh
Confidence            77788889999999999999999999999999998876 68999999998888888999999999999999999999998


Q ss_pred             CCccceeeeCCCcccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~  163 (182)
                      ..++.+++..|++..++...
T Consensus       185 ~~gi~v~~v~Pg~v~t~~~~  204 (264)
T 2pd6_A          185 RHGIRCNSVLPGFIATPMTQ  204 (264)
T ss_dssp             GGTEEEEEEEECSBCSCC--
T ss_pred             hcCeEEEEEeeecccccchh
Confidence            76677777788887776543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=1.8e-25  Score=164.77  Aligned_cols=160  Identities=21%  Similarity=0.181  Sum_probs=138.9

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+++....           .+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~  104 (248)
T 2pnf_A           25 EKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRM  104 (248)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccC
Confidence            4567788888877643211           245788999999999999999999999 9999999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++++.|++++.++||++||..+..+.++...|+++|++++.++++++.|++...+.+++
T Consensus       105 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~  184 (248)
T 2pnf_A          105 SLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNA  184 (248)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999988778999999999888888889999999999999999999999866667777


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       185 v~Pg~v~t~~~~  196 (248)
T 2pnf_A          185 VAPGFIETDMTA  196 (248)
T ss_dssp             EEECSBCCGGGG
T ss_pred             EEeceecCchhh
Confidence            788887776654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.93  E-value=1.7e-25  Score=165.24  Aligned_cols=160  Identities=24%  Similarity=0.190  Sum_probs=138.2

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.+..+++...         ....++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.+.
T Consensus        24 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~  103 (251)
T 1zk4_A           24 TKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT  103 (251)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCH
Confidence            456778888877764321         0115789999999999999999999999 999999999999887777888899


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC--CCcccee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG--YMLWGTT  150 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~~~i~  150 (182)
                      ++|+..+++|+.+++++++.+++.|++++. ++||++||..++.+.++...|+++|++++.++++++.|+.  ...+.+.
T Consensus       104 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~  183 (251)
T 1zk4_A          104 AEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVN  183 (251)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEE
Confidence            999999999999999999999999988776 8999999999988888899999999999999999999987  5566777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       184 ~v~Pg~v~t~~~~  196 (251)
T 1zk4_A          184 TVHPGYIKTPLVD  196 (251)
T ss_dssp             EEEECCBCCHHHH
T ss_pred             EEeeCcCcchhhh
Confidence            7788888777654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=2.1e-25  Score=166.29  Aligned_cols=160  Identities=24%  Similarity=0.203  Sum_probs=123.0

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+.+...          ..+.++.++.+|++|+++++++++.+.+ + +++|+||||||.....++.+.
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~  111 (266)
T 1xq1_A           32 EEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY  111 (266)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhC
Confidence            456778888877754321          1255789999999999999999999998 8 899999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+..+++|+.+++++++++.|.|++++.++||++||..++.+.++...|+++|++++.++++++.|++..++.+++
T Consensus       112 ~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  191 (266)
T 1xq1_A          112 TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANA  191 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEE
Confidence            99999999999999999999999999988778999999999988888888999999999999999999999876677788


Q ss_pred             eCCCcccccccc
Q psy5462         152 TTPLRSVTILYQ  163 (182)
Q Consensus       152 ~~~~~~~~~~~~  163 (182)
                      ..|++..++...
T Consensus       192 v~Pg~v~t~~~~  203 (266)
T 1xq1_A          192 VAPAVIATPLAE  203 (266)
T ss_dssp             EECCSCC-----
T ss_pred             EeeCCCccchhh
Confidence            899988777644

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=2.9e-25  Score=164.83  Aligned_cols=160  Identities=23%  Similarity=0.204  Sum_probs=138.3

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~   71 (182)
                      ++|.++|+.|..+++...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||... ..++.+.
T Consensus        31 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~  110 (260)
T 3awd_A           31 TALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDM  110 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccC
Confidence            456778888877764321          1256789999999999999999999988 999999999999876 5677888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.++|+..+++|+.+++++++++.+.|++++.++||++||..+..+.+..  ..|+++|++++.++++++.|++..++.+
T Consensus       111 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v  190 (260)
T 3awd_A          111 TDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA  190 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            99999999999999999999999999988778999999999988776666  8999999999999999999998766777


Q ss_pred             eeeCCCcccccccc
Q psy5462         150 TVTTPLRSVTILYQ  163 (182)
Q Consensus       150 ~v~~~~~~~~~~~~  163 (182)
                      .+..|++..++...
T Consensus       191 ~~v~pg~v~t~~~~  204 (260)
T 3awd_A          191 NAVAPTYIETTLTR  204 (260)
T ss_dssp             EEEEECCBCCTTTH
T ss_pred             EEEEeeeeccchhh
Confidence            77889888777654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=5.6e-25  Score=163.65  Aligned_cols=161  Identities=17%  Similarity=0.125  Sum_probs=137.8

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++....           .+.++.++.||++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~  111 (265)
T 1h5q_A           32 RAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL  111 (265)
T ss_dssp             HHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGC
T ss_pred             HHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhC
Confidence            4577789988888764322           145789999999999999999999998 9999999999999877788889


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccC-------CCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAV-------NVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~-------~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.++|+..+++|+.+++++++++.+.|.+++ .++||++||..+..+.+       +...|+++|++++.++++++.|++
T Consensus       112 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  191 (265)
T 1h5q_A          112 THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA  191 (265)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998765 48999999988765543       268999999999999999999998


Q ss_pred             CCccceeeeCCCccccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ..++.+.+.+|++..++....
T Consensus       192 ~~gi~v~~v~Pg~v~t~~~~~  212 (265)
T 1h5q_A          192 SAGIRVNALSPGYVNTDQTAH  212 (265)
T ss_dssp             GGTEEEEEEEECSBCCGGGGG
T ss_pred             hcCcEEEEEecCccccccccc
Confidence            766777777999888876543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.93  E-value=2.6e-25  Score=166.22  Aligned_cols=156  Identities=13%  Similarity=0.131  Sum_probs=133.6

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cC---CccEEEEcccCCC-----CC
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IG---YVDILINNAGIVA-----SS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~---~id~li~~ag~~~-----~~   66 (182)
                      ++|.++|+.|...++..        ...+.++.++.||++|+++++++++.+.+ +|   ++|++|||||...     ..
T Consensus        27 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~  106 (269)
T 2h7i_A           27 RVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGIN  106 (269)
T ss_dssp             HHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTS
T ss_pred             HHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCcccccccc
Confidence            45777888887765432        12345788999999999999999999999 99   9999999999876     45


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      ++.+.+.++|+..+++|+.++++++++++|+|++  .|+||++||..+ .+.+.+..|+++|++++.|+++++.|+++.+
T Consensus       107 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~g  183 (269)
T 2h7i_A          107 PFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAGKYG  183 (269)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            7788899999999999999999999999999865  389999999876 6677889999999999999999999998776


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.++..+|++..|+..
T Consensus       184 i~vn~v~PG~v~T~~~  199 (269)
T 2h7i_A          184 VRSNLVAAGPIRTLAM  199 (269)
T ss_dssp             CEEEEEEECCCCCHHH
T ss_pred             cEEEEEecCcccchhh
Confidence            7777778998888754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.93  E-value=2.2e-25  Score=165.66  Aligned_cols=157  Identities=19%  Similarity=0.126  Sum_probs=132.5

Q ss_pred             cccc---ccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHh---cCCcc--EEEEcccCCC
Q psy5462           5 RTTG---HIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRK---IGYVD--ILINNAGIVA   64 (182)
Q Consensus         5 ~l~~---~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~id--~li~~ag~~~   64 (182)
                      +|.+   +|+.|..+++....            .+.++.++.||++|+++++++++.+.+   +|++|  +||||||...
T Consensus        25 ~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~  104 (259)
T 1oaa_A           25 QLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG  104 (259)
T ss_dssp             HHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCC
T ss_pred             HHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccC
Confidence            4555   78888777643210            156789999999999999999999875   46888  9999999865


Q ss_pred             C--CCccc-CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC--CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHH
Q psy5462          65 S--SSVLA-HTDHEIERIMDVNLMSNIKMVREFLPDMLEN--NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        65 ~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      .  .++.+ .+.++|+.++++|+.++++++++++|+|+++  +.|+||++||..++.+.++...|+++|++++.|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la  184 (259)
T 1oaa_A          105 DVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLA  184 (259)
T ss_dssp             CCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHH
Confidence            3  45777 6899999999999999999999999999876  56899999999999998999999999999999999999


Q ss_pred             hhhCCCccceeeeCCCcccccccc
Q psy5462         140 CFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       140 ~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      .|++.  +.++..+|++..|++..
T Consensus       185 ~e~~~--i~vn~v~PG~v~T~~~~  206 (259)
T 1oaa_A          185 AEEPS--VRVLSYAPGPLDNDMQQ  206 (259)
T ss_dssp             HHCTT--EEEEEEECCSBSSHHHH
T ss_pred             hhCCC--ceEEEecCCCcCcchHH
Confidence            99873  56666689988887654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.93  E-value=8.7e-26  Score=173.38  Aligned_cols=138  Identities=10%  Similarity=0.101  Sum_probs=124.6

Q ss_pred             ceeEEEEccCCCH--H------------------HHHHHHHHHHh-cCCccEEEEcccCC--CCCCcccCCHHHHHHHHH
Q psy5462          25 HVAVYFKADVSDK--A------------------EIKKLNENVRK-IGYVDILINNAGIV--ASSSVLAHTDHEIERIMD   81 (182)
Q Consensus        25 ~~~~~~~~D~s~~--~------------------~~~~~~~~~~~-~~~id~li~~ag~~--~~~~~~~~~~~~~~~~~~   81 (182)
                      ..+.++.||+++.  +                  +++++++.+.+ +|++|+||||||..  ...++.+.+.++|+.+++
T Consensus        65 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~  144 (329)
T 3lt0_A           65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALS  144 (329)
T ss_dssp             CEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHH
Confidence            4578899999988  8                  99999999999 99999999999975  357788999999999999


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCc-hhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS-AYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVT  159 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~-~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~  159 (182)
                      +|+.++++++++++|+|+++  |+||++||.++..+.+... .|++||+|+.+|+++|+.|+++ .++.+...+|+++.|
T Consensus       145 vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T  222 (329)
T 3lt0_A          145 KSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             HHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeec
Confidence            99999999999999999875  8999999999999988886 9999999999999999999986 667777779999988


Q ss_pred             ccccc
Q psy5462         160 ILYQR  164 (182)
Q Consensus       160 ~~~~~  164 (182)
                      ++...
T Consensus       223 ~~~~~  227 (329)
T 3lt0_A          223 RAATA  227 (329)
T ss_dssp             HHHHT
T ss_pred             hhHhh
Confidence            87755

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.93  E-value=5e-25  Score=165.32  Aligned_cols=159  Identities=15%  Similarity=0.139  Sum_probs=136.3

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcc-c
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVL-A   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~-~   70 (182)
                      ++|.++|+.|..+++....          .+.++.++.+|++|+++++++++.+.+ ++++|++|||||.... .++. +
T Consensus        52 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~  131 (279)
T 3ctm_A           52 EAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDV  131 (279)
T ss_dssp             HHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCS
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCccccc
Confidence            4567788888877655432          145788999999999999999999988 9999999999998766 6666 7


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc--cCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA--AVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+.++|+..+++|+.+++++++.+++.|++++.++||++||..+..+  .++...|+++|++++.++++++.|++..+ .
T Consensus       132 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~  210 (279)
T 3ctm_A          132 DNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-R  210 (279)
T ss_dssp             SHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-E
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-C
Confidence            78899999999999999999999999999877899999999998877  77889999999999999999999998766 7


Q ss_pred             eeeeCCCcccccccc
Q psy5462         149 TTVTTPLRSVTILYQ  163 (182)
Q Consensus       149 i~v~~~~~~~~~~~~  163 (182)
                      +++..|++..++...
T Consensus       211 v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          211 VNTISPGYIDTDITD  225 (279)
T ss_dssp             EEEEEECSBSSTTTS
T ss_pred             EEEEeccCCcccccc
Confidence            788889988887653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=3e-25  Score=162.24  Aligned_cols=158  Identities=17%  Similarity=0.163  Sum_probs=132.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.|..+++...       ..+.++.++.+|++|+++++++++.+.+  .+|++|||||....+++.+.+.++|
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~~d~lv~~Ag~~~~~~~~~~~~~~~   96 (230)
T 3guy_A           19 KLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS--IPSTVVHSAGSGYFGLLQEQDPEQI   96 (230)
T ss_dssp             HHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS--CCSEEEECCCCCCCSCGGGSCHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh--cCCEEEEeCCcCCCCccccCCHHHH
Confidence            467788888887764331       2356788999999999999999887754  3499999999988888899999999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +..+++|+.++++++++++|+|++++ ++||++||..+..+.++...|+++|++++.|+++++.|++..++.+...+|++
T Consensus        97 ~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  175 (230)
T 3guy_A           97 QTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGG  175 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCc
Confidence            99999999999999999999998765 49999999999999999999999999999999999999997767777778998


Q ss_pred             cccccccc
Q psy5462         157 SVTILYQR  164 (182)
Q Consensus       157 ~~~~~~~~  164 (182)
                      ..|++...
T Consensus       176 v~t~~~~~  183 (230)
T 3guy_A          176 MATEFWET  183 (230)
T ss_dssp             C-------
T ss_pred             ccChHHHh
Confidence            88887654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.93  E-value=7.1e-26  Score=167.76  Aligned_cols=159  Identities=18%  Similarity=0.157  Sum_probs=137.3

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cC------CccEEEEcccCCCC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IG------YVDILINNAGIVAS   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~------~id~li~~ag~~~~   65 (182)
                      ++|.++|+.+.++...           +...+.++.++.+|++|.++++++++.+.+ ++      ++|++|||||....
T Consensus        25 ~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~  104 (255)
T 3icc_A           25 KRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG  104 (255)
T ss_dssp             HHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCC
T ss_pred             HHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCC
Confidence            4577788888775322           123467889999999999999999998877 64      49999999999887


Q ss_pred             CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          66 SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      .++.+.+.++|+.++++|+.++++++++++|+|++  .++||++||..+..+.+....|+++|++++.|+++++.|++..
T Consensus       105 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~  182 (255)
T 3icc_A          105 AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGAR  182 (255)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHHhc
Confidence            88888999999999999999999999999999843  5899999999999999999999999999999999999999877


Q ss_pred             ccceeeeCCCccccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++.+...+|++..|++...
T Consensus       183 gi~v~~v~PG~v~t~~~~~  201 (255)
T 3icc_A          183 GITVNAILPGFVKTDMNAE  201 (255)
T ss_dssp             TCEEEEEEECCBCCSSSTT
T ss_pred             CeEEEEEEEeeecccchhh
Confidence            6777777999888887654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-24  Score=160.59  Aligned_cols=160  Identities=18%  Similarity=0.125  Sum_probs=133.0

Q ss_pred             ccccccc--ccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cC--CccEEEEcccCCC-CCCccc
Q psy5462           4 DRTTGHI--HGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IG--YVDILINNAGIVA-SSSVLA   70 (182)
Q Consensus         4 ~~l~~~g--~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--~id~li~~ag~~~-~~~~~~   70 (182)
                      ++|.++|  +.+..+++....       .+.++.++.+|++|+++++++++.+.+ ++  ++|+||||||... ..++.+
T Consensus        21 ~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~  100 (250)
T 1yo6_A           21 QQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTE  100 (250)
T ss_dssp             HHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSC
T ss_pred             HHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCccccc
Confidence            4567778  777777643321       256789999999999999999999988 88  8999999999887 677888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------C-----CCeEEEEecccccccc-------CCCchhhhhHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLEN------N-----TGHIVCISSIAALTAA-------VNVSAYFASKYGVT  132 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~ii~iss~~~~~~~-------~~~~~y~~sKaa~~  132 (182)
                      .+.++|+..+++|+.+++++++++++.|+++      +     .++||++||..+..+.       ++...|+++|++++
T Consensus       101 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  180 (250)
T 1yo6_A          101 PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN  180 (250)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHHHH
Confidence            8999999999999999999999999999876      5     6899999999887765       57789999999999


Q ss_pred             HHHHHHHhhhCCCccceeeeCCCcccccccc
Q psy5462         133 ENHPSIKCFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       133 ~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      .++++++.|++...+.+.+.+|++..++...
T Consensus       181 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  211 (250)
T 1yo6_A          181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG  211 (250)
T ss_dssp             HHHHHHHHHTGGGTCEEEEEECCCC------
T ss_pred             HHHHHHHHHhccCCeEEEEEcCCceecCCCC
Confidence            9999999999866667777799988877654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=4.3e-25  Score=162.50  Aligned_cols=160  Identities=19%  Similarity=0.203  Sum_probs=137.7

Q ss_pred             cccccccccceec-cCCC----------CCCCceeEE-EEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFI-PWCL----------PTKTHVAVY-FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~~~~----------~~~~~~~~~-~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.+..+ .+..          ...+.++.. +.+|++|+++++++++.+.+ ++++|++|||||.....++.+
T Consensus        19 ~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~   98 (245)
T 2ph3_A           19 LRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVR   98 (245)
T ss_dssp             HHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGG
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccc
Confidence            4677788888776 3221          112445666 99999999999999999999 999999999999887777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+..+++|+.+++++++++++.|++++.++||++||..+..+.++...|+++|++++.++++++.|+....+.+.
T Consensus        99 ~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  178 (245)
T 2ph3_A           99 MKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVN  178 (245)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence            89999999999999999999999999999877899999999988888888999999999999999999999986666777


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       179 ~v~Pg~v~t~~~~  191 (245)
T 2ph3_A          179 AVAPGFIETEMTE  191 (245)
T ss_dssp             EEEECSBCCHHHH
T ss_pred             EEEEEeecCcchh
Confidence            7788888776654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.93  E-value=6.9e-25  Score=166.51  Aligned_cols=159  Identities=18%  Similarity=0.194  Sum_probs=133.5

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCH-HHHHHHHHHHHh-cCCccEEEEcccCCCC-----
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDK-AEIKKLNENVRK-IGYVDILINNAGIVAS-----   65 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~-~~~~~~~~~~~~-~~~id~li~~ag~~~~-----   65 (182)
                      ++|+++|+.|..+++...           ..+.++.++.||++|+ ++++++++.+.+ ++++|+||||||....     
T Consensus        30 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~  109 (311)
T 3o26_A           30 KQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDAD  109 (311)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccc
Confidence            457778888887764321           2345799999999998 999999999999 9999999999998642     


Q ss_pred             -------------------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc--
Q psy5462          66 -------------------------SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA--  118 (182)
Q Consensus        66 -------------------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~--  118 (182)
                                               ..+.+.+.++|+..+++|+.|+++++++++|+|++++.++||++||..+..+.  
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~  189 (311)
T 3o26_A          110 RFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS  189 (311)
T ss_dssp             HHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCC
T ss_pred             hhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCccccccc
Confidence                                     23456789999999999999999999999999998888999999999876543  


Q ss_pred             -----------------------------------------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         119 -----------------------------------------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       119 -----------------------------------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                                                               ++...|++||++++.|+++++.|++.  +.+.+.+|+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v  267 (311)
T 3o26_A          190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLV  267 (311)
T ss_dssp             CHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSB
T ss_pred             chhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCce
Confidence                                                     35578999999999999999999863  57777899999


Q ss_pred             ccccccc
Q psy5462         158 VTILYQR  164 (182)
Q Consensus       158 ~~~~~~~  164 (182)
                      .|++...
T Consensus       268 ~T~~~~~  274 (311)
T 3o26_A          268 KTEMNYG  274 (311)
T ss_dssp             CSGGGTT
T ss_pred             ecCCcCC
Confidence            8887644

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.93  E-value=2.8e-25  Score=165.21  Aligned_cols=159  Identities=19%  Similarity=0.068  Sum_probs=132.8

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh--cCCccEEEEccc--CC-----C
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAG--IV-----A   64 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~id~li~~ag--~~-----~   64 (182)
                      ++|.++|+.|..+++...          ..+.++.++.+|++|+++++++++.+.+  +|++|+||||||  ..     .
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~  102 (260)
T 2qq5_A           23 LQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTR  102 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTT
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccC
Confidence            457778888877654321          1256789999999999999999998865  799999999995  32     2


Q ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          65 SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ..++.+.+.++|+.++++|+.+++++++++.|+|++++.|+||++||..+..+. +...|+++|++++.|+++++.|++.
T Consensus       103 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~  181 (260)
T 2qq5_A          103 NKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRR  181 (260)
T ss_dssp             TCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhcc
Confidence            456778888999999999999999999999999988878999999999887653 4689999999999999999999987


Q ss_pred             CccceeeeCCCcccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~  163 (182)
                      .++.+++.+|++..|++..
T Consensus       182 ~gi~v~~v~PG~v~T~~~~  200 (260)
T 2qq5_A          182 HGVSCVSLWPGIVQTELLK  200 (260)
T ss_dssp             GTCEEEEEECCCSCTTTC-
T ss_pred             CCeEEEEEecCccccHHHH
Confidence            7677777789988887653

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=5.5e-25  Score=162.85  Aligned_cols=159  Identities=20%  Similarity=0.205  Sum_probs=137.3

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+..+++...          ..+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++ +.+
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~-~~~  107 (255)
T 1fmc_A           29 ITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMP  107 (255)
T ss_dssp             HHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCC
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCC-CCC
Confidence            456778888877764321          1256788999999999999999999988 9999999999998776665 678


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.+++++++++.|.|++++.++||++||..++.+.++...|+++|++++.++++++.|++...+.+++.
T Consensus       108 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v  187 (255)
T 1fmc_A          108 MADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI  187 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            99999999999999999999999999887789999999999988888899999999999999999999998666677777


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      .|++..++...
T Consensus       188 ~Pg~v~t~~~~  198 (255)
T 1fmc_A          188 APGAILTDALK  198 (255)
T ss_dssp             EECSBCSHHHH
T ss_pred             ecccCcchhhh
Confidence            88888776543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=7.7e-25  Score=162.25  Aligned_cols=161  Identities=20%  Similarity=0.172  Sum_probs=138.5

Q ss_pred             cccccccccceeccCC-CCC----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccC-CCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWC-LPT----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGI-VASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~-~~~~~~~~   70 (182)
                      ++|.++|+.+..+++. ...          .+.++.++.+|++|+++++++++.+.+ ++++|+||||||. ....++.+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~  104 (258)
T 3afn_B           25 RLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPE  104 (258)
T ss_dssp             HHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCcccc
Confidence            4677789988887765 221          145789999999999999999999999 9999999999998 55667888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--C---CeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN--T---GHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .+.++|+..+++|+.++++++++++|.|++++  .   ++||++||..+.. +.++...|+++|++++.++++++.|++.
T Consensus       105 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~  184 (258)
T 3afn_B          105 IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTK  184 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            89999999999999999999999999997654  3   8999999998877 7788899999999999999999999987


Q ss_pred             CccceeeeCCCccccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ..+.+++..|++..++....
T Consensus       185 ~gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          185 DGVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             GTEEEEEEEECSBSSGGGTT
T ss_pred             cCeEEEEEeCCCcccccccc
Confidence            66777788898888776543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.92  E-value=6.1e-25  Score=162.67  Aligned_cols=156  Identities=17%  Similarity=0.083  Sum_probs=135.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC-cccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS-VLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~-~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+.|..+++......  ...+.+|++|.++++++++.+.+ ++++|++|||||...... +.+.+.++|+..++
T Consensus        40 ~~l~~~G~~V~~~~r~~~~~~--~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~  117 (251)
T 3orf_A           40 KFFKSKSWNTISIDFRENPNA--DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMID  117 (251)
T ss_dssp             HHHHHTTCEEEEEESSCCTTS--SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCccccc--ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHH
Confidence            467788999888876654433  34678999999999999999999 999999999999877654 67778999999999


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC--CCccceeeeCCCcccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG--YMLWGTTVTTPLRSVT  159 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~~~i~v~~~~~~~~  159 (182)
                      +|+.+++++++++.++|++  .|+||++||..+..+.++...|+++|++++.|+++++.|++  +.++.+.+..|++..+
T Consensus       118 ~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t  195 (251)
T 3orf_A          118 MNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDT  195 (251)
T ss_dssp             HHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCC
T ss_pred             HHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcC
Confidence            9999999999999999865  48999999999999999999999999999999999999986  5566677778888877


Q ss_pred             cccc
Q psy5462         160 ILYQ  163 (182)
Q Consensus       160 ~~~~  163 (182)
                      +...
T Consensus       196 ~~~~  199 (251)
T 3orf_A          196 PTNR  199 (251)
T ss_dssp             HHHH
T ss_pred             cchh
Confidence            7653

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.92  E-value=2.3e-25  Score=164.62  Aligned_cols=158  Identities=20%  Similarity=0.233  Sum_probs=120.2

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++|+.+...++...       ....++.++.+|+++.+++.++++.+   +++|++|||||......+.+.+.++|
T Consensus        32 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~li~~Ag~~~~~~~~~~~~~~~  108 (249)
T 3f9i_A           32 RLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT---SNLDILVCNAGITSDTLAIRMKDQDF  108 (249)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC---SCCSEEEECCC-------------CH
T ss_pred             HHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc---CCCCEEEECCCCCCCCccccCCHHHH
Confidence            467788888887764332       12357889999999999998887654   78999999999988777778889999


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      +..+++|+.++++++++++|.|++++.|+||++||..++.+.++...|+++|++++.|+++++.|++..++.+.+.+|++
T Consensus       109 ~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~  188 (249)
T 3f9i_A          109 DKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGF  188 (249)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCc
Confidence            99999999999999999999999888899999999999999999999999999999999999999987667777778998


Q ss_pred             cccccccc
Q psy5462         157 SVTILYQR  164 (182)
Q Consensus       157 ~~~~~~~~  164 (182)
                      ..++....
T Consensus       189 v~t~~~~~  196 (249)
T 3f9i_A          189 IKSDMTDK  196 (249)
T ss_dssp             BC------
T ss_pred             cccCcccc
Confidence            88876654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-25  Score=167.50  Aligned_cols=159  Identities=27%  Similarity=0.321  Sum_probs=136.1

Q ss_pred             cccccccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++...          ..+.++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+.+
T Consensus        49 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~  128 (272)
T 1yb1_A           49 YEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQ  128 (272)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGH
T ss_pred             HHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCC
Confidence            456777888877664321          1256789999999999999999999998 99999999999988777788888


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC---CCccce
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG---YMLWGT  149 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~---~~~~~i  149 (182)
                      .++|+..+++|+.+++++++++++.|++++.++||++||..++.+.++...|+++|++++.++++++.|+.   ..++.+
T Consensus       129 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v  208 (272)
T 1yb1_A          129 DPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKT  208 (272)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            99999999999999999999999999988889999999999888877889999999999999999999986   345667


Q ss_pred             eeeCCCccccccc
Q psy5462         150 TVTTPLRSVTILY  162 (182)
Q Consensus       150 ~v~~~~~~~~~~~  162 (182)
                      ++..|++..|+..
T Consensus       209 ~~v~Pg~v~t~~~  221 (272)
T 1yb1_A          209 TCLCPNFVNTGFI  221 (272)
T ss_dssp             EEEEETHHHHCST
T ss_pred             EEEeCCcccCCcc
Confidence            7778888777654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.92  E-value=1.4e-24  Score=158.09  Aligned_cols=144  Identities=14%  Similarity=0.094  Sum_probs=126.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC-CCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.+...++...          +|++|+++++++++.+   +++|++|||||.. ...++.+.+.++|+..+++
T Consensus        24 ~~l~~~G~~V~~~~r~~~----------~D~~~~~~v~~~~~~~---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~   90 (223)
T 3uce_A           24 KQLESEHTIVHVASRQTG----------LDISDEKSVYHYFETI---GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDT   90 (223)
T ss_dssp             HHHCSTTEEEEEESGGGT----------CCTTCHHHHHHHHHHH---CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEecCCcc----------cCCCCHHHHHHHHHHh---CCCCEEEECCCCCCCCCCcccCCHHHHHhhhee
Confidence            456777887777765443          9999999999998876   8899999999987 5577889999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.+++++++++.|+|++  +|+||++||..+..+.++...|+++|++++.|+++++.|+++  +.++..+|++..|+..
T Consensus        91 N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~  166 (223)
T 3uce_A           91 KFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAY  166 (223)
T ss_dssp             HHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGG
T ss_pred             eeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhh
Confidence            999999999999999865  489999999999999999999999999999999999999986  6677778998888876


Q ss_pred             cc
Q psy5462         163 QR  164 (182)
Q Consensus       163 ~~  164 (182)
                      ..
T Consensus       167 ~~  168 (223)
T 3uce_A          167 KG  168 (223)
T ss_dssp             TT
T ss_pred             hh
Confidence            54

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.92  E-value=7.7e-25  Score=164.02  Aligned_cols=161  Identities=19%  Similarity=0.262  Sum_probs=136.9

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~~~   71 (182)
                      ++|.++|+.|..+++...         ....++.++.+|++|+++++++++.+.+ ++++|++|||||....  .++.+.
T Consensus        34 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~  113 (278)
T 2bgk_A           34 KLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEA  113 (278)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTC
T ss_pred             HHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhC
Confidence            456778888877653321         1123789999999999999999999999 9999999999998643  567788


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-CCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-NVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.+.|++++.++||++||..++.+.+ +...|+++|++++.++++++.|++..++.+.
T Consensus       114 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  193 (278)
T 2bgk_A          114 GNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN  193 (278)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            999999999999999999999999999987789999999999888777 7889999999999999999999987667777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      +..|++..++....
T Consensus       194 ~v~Pg~v~t~~~~~  207 (278)
T 2bgk_A          194 CVSPYIVASPLLTD  207 (278)
T ss_dssp             EEEESCCSCCCCTT
T ss_pred             EEEeceecchhhhh
Confidence            77888887776543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=1.1e-24  Score=165.13  Aligned_cols=157  Identities=18%  Similarity=0.092  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCCC----------C-CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------K-THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~-~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+++....          . +.++.++.||++|+++++++++.+.+ ++++|+||||||.....++.+.
T Consensus        44 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~  123 (302)
T 1w6u_A           44 TLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERL  123 (302)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccC
Confidence            4567788888777644321          0 56789999999999999999999998 9999999999998777778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHH-hCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDML-ENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.+.|. +++.++||++||..+..+.++...|+++|++++.++++++.+++..++.+.
T Consensus       124 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~  203 (302)
T 1w6u_A          124 SPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN  203 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            9999999999999999999999999998 445689999999998888888999999999999999999999987666777


Q ss_pred             eeCCCccccc
Q psy5462         151 VTTPLRSVTI  160 (182)
Q Consensus       151 v~~~~~~~~~  160 (182)
                      +..|++..++
T Consensus       204 ~v~Pg~v~t~  213 (302)
T 1w6u_A          204 VIQPGPIKTK  213 (302)
T ss_dssp             EEEECCBCC-
T ss_pred             EEeeccCCCc
Confidence            7788887665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.92  E-value=1.5e-25  Score=183.97  Aligned_cols=149  Identities=21%  Similarity=0.214  Sum_probs=126.1

Q ss_pred             cccccccccceeccCCC-------------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL-------------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~   63 (182)
                      ++|.++|+.|.+.+...                   ...+.++   .+|++|.++++++++.+.+ ||++|+||||||+.
T Consensus        26 ~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~  102 (604)
T 2et6_A           26 LEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGIL  102 (604)
T ss_dssp             HHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            45677888887764321                   1112332   3688888889999999988 99999999999998


Q ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          64 ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ...++.+++.++|+.++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+|+.+|+++|+.|++
T Consensus       103 ~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~  182 (604)
T 2et6_A          103 RDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGA  182 (604)
T ss_dssp             CCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhC
Confidence            77888999999999999999999999999999999988889999999999999989999999999999999999999999


Q ss_pred             CCccceeeeCCC
Q psy5462         144 YMLWGTTVTTPL  155 (182)
Q Consensus       144 ~~~~~i~v~~~~  155 (182)
                      +.++.++.++|+
T Consensus       183 ~~gIrVn~v~Pg  194 (604)
T 2et6_A          183 KYNIKANAIAPL  194 (604)
T ss_dssp             GGTEEEEEEEEC
T ss_pred             ccCeEEEEEccC
Confidence            765555555675

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.92  E-value=1.3e-24  Score=168.45  Aligned_cols=143  Identities=13%  Similarity=0.046  Sum_probs=122.3

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-------------CCCCc---------------------
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-------------ASSSV---------------------   68 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-------------~~~~~---------------------   68 (182)
                      +.++..+.+|++|+++++++++.+.+ ||++|+||||||..             ...++                     
T Consensus       108 G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i  187 (405)
T 3zu3_A          108 GLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVL  187 (405)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEE
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccC
Confidence            56788999999999999999999999 99999999999974             22344                     


Q ss_pred             ccCCHHHHHHHHHHHhHHHH-HHHHHHhH-HHHhCCCCeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhCC
Q psy5462          69 LAHTDHEIERIMDVNLMSNI-KMVREFLP-DMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~-~l~~~~~~-~l~~~~~~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .+.+.++|+.++++|..+.+ .+++++.+ .|++ ++|+||++||..+..+.+.+  +.|++||+++.+|+++||.|+++
T Consensus       188 ~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~  266 (405)
T 3zu3_A          188 QPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAA  266 (405)
T ss_dssp             CCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCc
Confidence            67899999999999999998 77887765 4443 45899999999998888877  99999999999999999999997


Q ss_pred             C-ccceeeeCCCcccccccccchh
Q psy5462         145 M-LWGTTVTTPLRSVTILYQRSVL  167 (182)
Q Consensus       145 ~-~~~i~v~~~~~~~~~~~~~~~~  167 (182)
                      . ++.+++..|++..|+.......
T Consensus       267 ~~GIRVNaVaPG~i~T~~s~~ip~  290 (405)
T 3zu3_A          267 HGGGDARVSVLKAVVSQASSAIPM  290 (405)
T ss_dssp             TTSCEEEEEECCCCCCHHHHTSTT
T ss_pred             ccCeEEEEEEeCCCcCchhhcCCC
Confidence            7 7777777999988887665443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.92  E-value=1.1e-24  Score=163.68  Aligned_cols=160  Identities=14%  Similarity=0.151  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEc-ccCCCCCCc-----c
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINN-AGIVASSSV-----L   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~-ag~~~~~~~-----~   69 (182)
                      ++|+++|+.|..+++...       ..+.++.++.||++|+++++++++.+ + ++++|++||| +|......+     .
T Consensus        48 ~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~~~~~~~~~  126 (281)
T 3ppi_A           48 RRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQRIVQRDGS  126 (281)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCCCSBCTTSC
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccccccccccccc
Confidence            467788998887764332       12567999999999999999999999 6 9999999999 555444433     3


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHh------CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLE------NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.+.++|+..+++|+.+++++++++.+.|.+      ++.|+||++||..++.+.++...|+++|++++.|+++++.|++
T Consensus       127 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~  206 (281)
T 3ppi_A          127 PADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS  206 (281)
T ss_dssp             BCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence            6789999999999999999999999999987      4578999999999999999999999999999999999999998


Q ss_pred             CCccceeeeCCCccccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ..++.+...+|+++.|+....
T Consensus       207 ~~gi~v~~v~PG~v~T~~~~~  227 (281)
T 3ppi_A          207 SAGIRVNTIAPGTMKTPIMES  227 (281)
T ss_dssp             GGTEEEEEEEECSBCCHHHHT
T ss_pred             hcCeEEEEEecCcCCchhhhc
Confidence            776777777999888876654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=6.5e-25  Score=162.78  Aligned_cols=149  Identities=15%  Similarity=0.126  Sum_probs=127.4

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-CCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-ASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++....         .+.++..+     |+++++++++.+.+ ++++|+||||||.. ...++.+.+
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~   93 (254)
T 1zmt_A           19 LRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYA   93 (254)
T ss_dssp             HHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCC
Confidence            4577788888877644321         12333333     67788889999888 99999999999987 667788899


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+..+++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.
T Consensus        94 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  173 (254)
T 1zmt_A           94 VEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI  173 (254)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            99999999999999999999999999988789999999999998888999999999999999999999998776777788


Q ss_pred             CCCcc
Q psy5462         153 TPLRS  157 (182)
Q Consensus       153 ~~~~~  157 (182)
                      +|++.
T Consensus       174 ~PG~v  178 (254)
T 1zmt_A          174 GPNYL  178 (254)
T ss_dssp             EESSB
T ss_pred             ecCcc
Confidence            99988

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=1.4e-24  Score=160.61  Aligned_cols=160  Identities=20%  Similarity=0.176  Sum_probs=136.9

Q ss_pred             cccccccccceeccCCCCC-------CCcee-EEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVA-VYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~-~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.+..+++....       .+.++ .++.+|++|+++++++++.+.+++++|++|||||.....++.+.+.++
T Consensus        29 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~  108 (254)
T 2wsb_A           29 RAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDAT  108 (254)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHH
Confidence            4567788888877654221       13456 889999999999999998876678899999999998777788889999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      |+..+++|+.++++++++++|.|++++.++||++||..+..+.+..  ..|+++|++++.++++++.|++..++.+.+.+
T Consensus       109 ~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~  188 (254)
T 2wsb_A          109 WRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA  188 (254)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEE
Confidence            9999999999999999999999998888999999999988777766  89999999999999999999987667777788


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..++...
T Consensus       189 Pg~v~t~~~~  198 (254)
T 2wsb_A          189 PGYVATEMTL  198 (254)
T ss_dssp             ECCBCSHHHH
T ss_pred             ecccCchhhh
Confidence            9888777654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.92  E-value=4.9e-26  Score=167.91  Aligned_cols=157  Identities=8%  Similarity=-0.015  Sum_probs=130.6

Q ss_pred             cccccccccceec-c--CCCCCCC---ceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC---CCcccCCH
Q psy5462           4 DRTTGHIHGILFI-P--WCLPTKT---HVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS---SSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~-~--~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~---~~~~~~~~   73 (182)
                      ++|.++|+.|..+ .  +......   ...  ..+|+.|+++++++++.+.+ ++++|+||||||....   .++.+.+.
T Consensus        19 ~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~   96 (244)
T 1zmo_A           19 EALTQDGYTVVCHDASFADAAERQRFESEN--PGTIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSE   96 (244)
T ss_dssp             HHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTEEECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCH
T ss_pred             HHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCCcccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCH
Confidence            4567788888776 3  3321100   000  12344488889999999998 9999999999998877   78889999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+.++++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|++++.|+++++.|++..++.+++.+
T Consensus        97 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~  176 (244)
T 1zmo_A           97 ADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIG  176 (244)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence            99999999999999999999999999888899999999999988889999999999999999999999987666777778


Q ss_pred             CCccccccc
Q psy5462         154 PLRSVTILY  162 (182)
Q Consensus       154 ~~~~~~~~~  162 (182)
                      |++..|++.
T Consensus       177 PG~v~T~~~  185 (244)
T 1zmo_A          177 PNFFNNPTY  185 (244)
T ss_dssp             ESSBCBTTT
T ss_pred             eCCCcCCcc
Confidence            998888765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=1.7e-24  Score=162.57  Aligned_cols=159  Identities=21%  Similarity=0.240  Sum_probs=135.1

Q ss_pred             cccccccccceeccCCCC----------C--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..+++...          .  ...++.++.+|++|+++++++++.+.+ ++++|+||||||.....++.+
T Consensus        50 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~  129 (279)
T 1xg5_A           50 RALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS  129 (279)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTT
T ss_pred             HHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccc
Confidence            456677888877764321          1  125688999999999999999999988 999999999999887777888


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC--CeEEEEeccccc--cccCCCchhhhhHHHHHHHHHHHHhhhC--C
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNT--GHIVCISSIAAL--TAAVNVSAYFASKYGVTENHPSIKCFSG--Y  144 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~iss~~~~--~~~~~~~~y~~sKaa~~~~~~~la~e~~--~  144 (182)
                      .+.++|+..+++|+.+++.+++.+++.|++++.  ++||++||..+.  .+.++...|+++|++++.|+++++.|++  .
T Consensus       130 ~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  209 (279)
T 1xg5_A          130 GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ  209 (279)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcC
Confidence            899999999999999999999999999998763  899999999887  5667778999999999999999999987  5


Q ss_pred             CccceeeeCCCccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~  162 (182)
                      ..+.+.+..|++..++..
T Consensus       210 ~~i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          210 THIRATCISPGVVETQFA  227 (279)
T ss_dssp             CCCEEEEEEESCBCSSHH
T ss_pred             CCeEEEEEecCcccchhh
Confidence            556677778888777663

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.92  E-value=1.7e-24  Score=169.07  Aligned_cols=166  Identities=13%  Similarity=0.013  Sum_probs=132.7

Q ss_pred             ccccc-ccccceeccCCCC----------------------CCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEE
Q psy5462           4 DRTTG-HIHGILFIPWCLP----------------------TKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILIN   58 (182)
Q Consensus         4 ~~l~~-~g~~v~~~~~~~~----------------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~   58 (182)
                      ++|++ .|+.+..++....                      ..+.++..+.||++|+++++++++.+.+ | |+||+|||
T Consensus        79 ~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVN  158 (422)
T 3s8m_A           79 ITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVY  158 (422)
T ss_dssp             HHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEE
T ss_pred             HHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEE
Confidence            45666 7888877653321                      2355788999999999999999999999 9 99999999


Q ss_pred             cccCC-------------CCCCc---------------------ccCCHHHHHHHHHHHhHHHH-HHHHHHhHHHHhCCC
Q psy5462          59 NAGIV-------------ASSSV---------------------LAHTDHEIERIMDVNLMSNI-KMVREFLPDMLENNT  103 (182)
Q Consensus        59 ~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~  103 (182)
                      |||..             ...++                     .+.+.++|+..+++|..+.+ .+++++.+.+...++
T Consensus       159 NAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~g  238 (422)
T 3s8m_A          159 SLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADG  238 (422)
T ss_dssp             CCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEE
T ss_pred             cCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCC
Confidence            99872             22333                     35799999999999999887 788887764333346


Q ss_pred             CeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccccccchhhH
Q psy5462         104 GHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQRSVLTI  169 (182)
Q Consensus       104 ~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~~~~~~  169 (182)
                      |+||++||.++..+.+.+  +.|++||+++.+|+++||.|+++.++.+++++|++..|+........+
T Consensus       239 G~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~  306 (422)
T 3s8m_A          239 ARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMP  306 (422)
T ss_dssp             EEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHH
T ss_pred             CEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCCh
Confidence            899999999998877766  899999999999999999999987667777789988888776544333

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=156.56  Aligned_cols=160  Identities=17%  Similarity=0.115  Sum_probs=136.6

Q ss_pred             ccccccc---ccceeccCCCCCC---------CceeEEEEccCCCHHHHHHHHHHHHh-cC--CccEEEEcccCCC-CCC
Q psy5462           4 DRTTGHI---HGILFIPWCLPTK---------THVAVYFKADVSDKAEIKKLNENVRK-IG--YVDILINNAGIVA-SSS   67 (182)
Q Consensus         4 ~~l~~~g---~~v~~~~~~~~~~---------~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--~id~li~~ag~~~-~~~   67 (182)
                      ++|.++|   +.|..+++.....         +.++.++.+|++|+++++++++.+.+ ++  ++|+||||||... ..+
T Consensus        39 ~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~  118 (267)
T 1sny_A           39 KALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR  118 (267)
T ss_dssp             HHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCC
T ss_pred             HHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccc
Confidence            4567778   7777776543321         35789999999999999999999998 88  8999999999887 677


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------C-----CCeEEEEeccccccccC---CCchhhhhHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN------N-----TGHIVCISSIAALTAAV---NVSAYFASKYGVTE  133 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~ii~iss~~~~~~~~---~~~~y~~sKaa~~~  133 (182)
                      +.+.+.++|+..+++|+.+++++++++.+.|+++      +     .++||++||..+..+.+   +...|+++|++++.
T Consensus       119 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~  198 (267)
T 1sny_A          119 ITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA  198 (267)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHH
Confidence            8888999999999999999999999999999876      3     58999999998876543   67899999999999


Q ss_pred             HHHHHHhhhCCCccceeeeCCCcccccccc
Q psy5462         134 NHPSIKCFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       134 ~~~~la~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      |+++++.|++...+.+.+..|++..|++..
T Consensus       199 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  228 (267)
T 1sny_A          199 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  228 (267)
T ss_dssp             HHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             HHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence            999999999876778888899988877654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.5e-24  Score=162.45  Aligned_cols=157  Identities=15%  Similarity=0.121  Sum_probs=134.9

Q ss_pred             cccccccccceeccCCCC---------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP---------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|..+++...               ..+.++.++.+|++|+++++++++.+.+ ++++|+||||||.....+
T Consensus        36 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~  115 (303)
T 1yxm_A           36 KELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP  115 (303)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence            456778888877764321               1356899999999999999999999999 999999999999877677


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|+..+++|+.+++++++++.+.+.+++.++||++||.. ..+.+....|+++|+++..++++++.|+...++
T Consensus       116 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  194 (303)
T 1yxm_A          116 AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGI  194 (303)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCe
Confidence            8888999999999999999999999999976655579999999988 777888899999999999999999999987666


Q ss_pred             ceeeeCCCcccccc
Q psy5462         148 GTTVTTPLRSVTIL  161 (182)
Q Consensus       148 ~i~v~~~~~~~~~~  161 (182)
                      .+++.+|++..++.
T Consensus       195 ~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          195 RINCVAPGVIYSQT  208 (303)
T ss_dssp             EEEEEEECSBCCTG
T ss_pred             EEEEEecCCcccch
Confidence            77777888877763

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=3.9e-24  Score=157.04  Aligned_cols=157  Identities=20%  Similarity=0.187  Sum_probs=134.6

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC----CHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH----TDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~----~~~~~~~   78 (182)
                      ++|.++|+.+..+++...  ..++.++.+|++|+++++++++.+ + ++++|++|||||.....++.+.    +.++|+.
T Consensus        20 ~~l~~~G~~V~~~~r~~~--~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~   96 (242)
T 1uay_A           20 LALKARGYRVVVLDLRRE--GEDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRR   96 (242)
T ss_dssp             HHHHHHTCEEEEEESSCC--SSSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHH
T ss_pred             HHHHHCCCEEEEEccCcc--ccceEEEeCCCCCHHHHHHHHHHH-HhhCCceEEEEcccccCcccccccccccchHHHHH
Confidence            467788999888876554  556789999999999999999999 7 9999999999998766555543    4559999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCC---C---CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENN---T---GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~---~---~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .+++|+.+++++++++.+.|.+++   .   ++||++||..++.+.++...|+++|++++.++++++.|++..++.+++.
T Consensus        97 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v  176 (242)
T 1uay_A           97 VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTV  176 (242)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            999999999999999999998754   3   4999999999888888899999999999999999999998766777778


Q ss_pred             CCCcccccccc
Q psy5462         153 TPLRSVTILYQ  163 (182)
Q Consensus       153 ~~~~~~~~~~~  163 (182)
                      +|++..++...
T Consensus       177 ~Pg~v~t~~~~  187 (242)
T 1uay_A          177 APGLFDTPLLQ  187 (242)
T ss_dssp             EECSCSSHHHH
T ss_pred             EeccCcchhhh
Confidence            99988777654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.91  E-value=5.4e-24  Score=169.53  Aligned_cols=161  Identities=17%  Similarity=0.194  Sum_probs=136.9

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCC-ccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGY-VDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~-id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.+..+...-..       ....+.++.||++|.++++++++.+.+ +++ +|++|||||......+.+.+.+
T Consensus       231 ~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~  310 (454)
T 3u0b_A          231 EVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEK  310 (454)
T ss_dssp             HHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHH
T ss_pred             HHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHH
Confidence            4677788887776532110       012457899999999999999999998 876 9999999999988889999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.++++|+.+++++++++.+.|.+++.++||++||.++..+.++...|+++|+++++|+++++.|++..++.++..+|
T Consensus       311 ~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~P  390 (454)
T 3u0b_A          311 RWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAP  390 (454)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEc
Confidence            99999999999999999999999988778999999999999999999999999999999999999999877777788899


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..|++...
T Consensus       391 G~v~T~~~~~  400 (454)
T 3u0b_A          391 GFIETKMTEA  400 (454)
T ss_dssp             CSBCC-----
T ss_pred             CcccChhhhh
Confidence            9888877654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.91  E-value=2.4e-24  Score=159.59  Aligned_cols=152  Identities=25%  Similarity=0.245  Sum_probs=128.0

Q ss_pred             ccccccccc-ceeccCCCCC----------CCceeEEEEccCCCH-HHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHG-ILFIPWCLPT----------KTHVAVYFKADVSDK-AEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~~~~~----------~~~~~~~~~~D~s~~-~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+. +..+++....          .+.++.++.+|++|+ ++++++++.+.+ ++++|++|||||..       
T Consensus        23 ~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-------   95 (254)
T 1sby_A           23 RELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL-------   95 (254)
T ss_dssp             HHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC-------
T ss_pred             HHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccC-------
Confidence            457778886 6666544310          145789999999998 999999999998 99999999999974       


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                       +.++|+..+++|+.+++++++++.|+|.+++   .|+||++||..++.+.++...|+++|++++.|+++++.+++..++
T Consensus        96 -~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi  174 (254)
T 1sby_A           96 -DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV  174 (254)
T ss_dssp             -CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSE
T ss_pred             -CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCe
Confidence             3466889999999999999999999997754   589999999999988889999999999999999999999875556


Q ss_pred             ceeeeCCCcccccccc
Q psy5462         148 GTTVTTPLRSVTILYQ  163 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~  163 (182)
                      .+.+.+|++..|+...
T Consensus       175 ~v~~v~Pg~v~t~~~~  190 (254)
T 1sby_A          175 TAYSINPGITRTPLVH  190 (254)
T ss_dssp             EEEEEEECSEESHHHH
T ss_pred             EEEEEecCCccCcccc
Confidence            7777789988887654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=1.6e-23  Score=157.73  Aligned_cols=157  Identities=22%  Similarity=0.195  Sum_probs=130.7

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEc-ccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINN-AGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~-ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..+++....           .+.++.++.+|++|+++++++++.+.+ +|++|++||| +|... .++.+
T Consensus        46 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~-~~~~~  124 (286)
T 1xu9_A           46 YHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFH  124 (286)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC-CCCCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-Ccccc
Confidence            4567778888777643211           123788999999999999999999988 9999999999 56543 34556


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhh--CCCccc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFS--GYMLWG  148 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~--~~~~~~  148 (182)
                      .+.++|+..+++|+.++++++++++|.|+++ .|+||++||.++..+.++...|+++|++++.++++++.|+  ...++.
T Consensus       125 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~  203 (286)
T 1xu9_A          125 DDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVS  203 (286)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeE
Confidence            7899999999999999999999999998764 4899999999999888899999999999999999999998  344556


Q ss_pred             eeeeCCCccccccc
Q psy5462         149 TTVTTPLRSVTILY  162 (182)
Q Consensus       149 i~v~~~~~~~~~~~  162 (182)
                      +.+.+|++..|+..
T Consensus       204 v~~v~Pg~v~t~~~  217 (286)
T 1xu9_A          204 ITLCVLGLIDTETA  217 (286)
T ss_dssp             EEEEEECCBCCHHH
T ss_pred             EEEeecCccCChhH
Confidence            66778888887764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.91  E-value=3.8e-24  Score=159.86  Aligned_cols=158  Identities=19%  Similarity=0.169  Sum_probs=136.0

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.+..+.+.-           ...+.++.++.+|++|+++++++++.+.+ ++++|++|||||.....++.+.
T Consensus        39 ~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~  118 (274)
T 1ja9_A           39 IELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV  118 (274)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccC
Confidence            45677888887766511           11256788999999999999999999988 9999999999998877778888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++++++++.+.|+ ++ ++||++||..++ .+.++...|+++|++++.++++++.|++...+.++
T Consensus       119 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~  196 (274)
T 1ja9_A          119 TQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN  196 (274)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            9999999999999999999999999987 33 899999999988 67788899999999999999999999987667778


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      +..|++..++...
T Consensus       197 ~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          197 CIAPGGVKTDMFD  209 (274)
T ss_dssp             EEEECCBSSHHHH
T ss_pred             EEeeCcccccchh
Confidence            8889887776654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.91  E-value=4.3e-24  Score=157.18  Aligned_cols=157  Identities=19%  Similarity=0.187  Sum_probs=131.5

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++....      ......++.+|++|+++++++++   +++++|++|||||.....++.+.+.++|+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~~~id~vi~~Ag~~~~~~~~~~~~~~~~  101 (244)
T 3d3w_A           25 QALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG---SVGPVDLLVNNAAVALLQPFLEVTKEAFD  101 (244)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT---TCCCCCEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH---HcCCCCEEEECCccCCCcchhhCCHHHHH
Confidence            4567788888777643211      01135677999999999988876   35789999999998877778888999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      ..+++|+.+++++++++.+.|++++ .++||++||..+..+.++...|+++|++++.++++++.|++...+.+++..|++
T Consensus       102 ~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~  181 (244)
T 3d3w_A          102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV  181 (244)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEecc
Confidence            9999999999999999999998876 799999999999888888999999999999999999999987667777778888


Q ss_pred             ccccccc
Q psy5462         157 SVTILYQ  163 (182)
Q Consensus       157 ~~~~~~~  163 (182)
                      ..++...
T Consensus       182 v~t~~~~  188 (244)
T 3d3w_A          182 VMTSMGQ  188 (244)
T ss_dssp             BTTTTHH
T ss_pred             ccccchh
Confidence            7776543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.90  E-value=9.7e-24  Score=155.25  Aligned_cols=157  Identities=22%  Similarity=0.197  Sum_probs=132.0

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++....      ....+.++.+|++|+++++++++   +++++|++|||||.....++.+.+.++|+
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~---~~~~id~vi~~Ag~~~~~~~~~~~~~~~~  101 (244)
T 1cyd_A           25 KALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG---GIGPVDLLVNNAALVIMQPFLEVTKEAFD  101 (244)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT---TCCCCSEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH---HcCCCCEEEECCcccCCCCcccCCHHHHH
Confidence            4567788888777643211      01245677999999999988876   35789999999998877778888999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      ..+++|+.+++++++++.+.|.+++ .++||++||..++.+.++...|+++|++++.++++++.|++...+.+++.+|++
T Consensus       102 ~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~  181 (244)
T 1cyd_A          102 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV  181 (244)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCc
Confidence            9999999999999999999998876 799999999999888888999999999999999999999986666777778888


Q ss_pred             ccccccc
Q psy5462         157 SVTILYQ  163 (182)
Q Consensus       157 ~~~~~~~  163 (182)
                      ..++...
T Consensus       182 v~t~~~~  188 (244)
T 1cyd_A          182 VLTDMGK  188 (244)
T ss_dssp             BTTHHHH
T ss_pred             ccCcccc
Confidence            7776543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=5.7e-24  Score=158.71  Aligned_cols=152  Identities=24%  Similarity=0.293  Sum_probs=127.2

Q ss_pred             cccccccccceeccCCC----------CC--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PT--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|..+++..          ..  .+.++.++.||++|+++++++++.+.+ +|++|++|||||...      
T Consensus        25 ~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~------   98 (267)
T 2gdz_A           25 EALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN------   98 (267)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC------
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC------
Confidence            45777888887775432          11  145788999999999999999999998 999999999999752      


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHH--HhhhCCC
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI--KCFSGYM  145 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l--a~e~~~~  145 (182)
                        .++|+..+++|+.+++.+++.++|+|++++   .++||++||..++.+.++...|+++|++++.+++++  +.|++..
T Consensus        99 --~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~  176 (267)
T 2gdz_A           99 --EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS  176 (267)
T ss_dssp             --SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             --hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccC
Confidence              345889999999999999999999998753   589999999999888888999999999999999995  6888766


Q ss_pred             ccceeeeCCCcccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~  163 (182)
                      ++.+++.+|++..++...
T Consensus       177 gi~v~~v~Pg~v~t~~~~  194 (267)
T 2gdz_A          177 GVRLNAICPGFVNTAILE  194 (267)
T ss_dssp             CEEEEEEEESCBSSHHHH
T ss_pred             CcEEEEEecCcCcchhhh
Confidence            667777789888777543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.90  E-value=2.5e-23  Score=159.01  Aligned_cols=128  Identities=20%  Similarity=0.246  Sum_probs=116.7

Q ss_pred             EEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEE
Q psy5462          30 FKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVC  108 (182)
Q Consensus        30 ~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~  108 (182)
                      ..+|++|.++++++++.+.+ ++++|+||||||.....++.+.+.++|+..+++|+.++++++++++|+|++++.++||+
T Consensus        69 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~  148 (319)
T 1gz6_A           69 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM  148 (319)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence            35899999999999999988 99999999999998777788899999999999999999999999999999887899999


Q ss_pred             EeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         109 ISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       109 iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      +||..+..+.++...|+++|+++..|+++++.|++..++.+++.+|++.
T Consensus       149 vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          149 TASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             ECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             ECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence            9999888888889999999999999999999999876566666677765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.90  E-value=3.8e-24  Score=176.13  Aligned_cols=151  Identities=22%  Similarity=0.215  Sum_probs=119.3

Q ss_pred             cccccccccceeccC---------CCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPW---------CLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~---------~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~   63 (182)
                      ++|.++|+.|.+.+.         ...          ..+..   ..+|++|.++++++++.+.+ +|++|+||||||..
T Consensus        37 ~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~  113 (613)
T 3oml_A           37 LLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGIL  113 (613)
T ss_dssp             HHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCCGGGHHHHHC----------CEECCCCCC
T ss_pred             HHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCC
Confidence            467788988888754         111          11222   34899999999999999998 99999999999998


Q ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          64 ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ...++.+.+.++|+.++++|+.++++++++++|+|++++.|+||++||.++..+.++...|+++|+|+.+|+++++.|++
T Consensus       114 ~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~  193 (613)
T 3oml_A          114 RDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA  193 (613)
T ss_dssp             CCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence            88888999999999999999999999999999999998889999999999999999999999999999999999999998


Q ss_pred             CCccceeeeCCCcc
Q psy5462         144 YMLWGTTVTTPLRS  157 (182)
Q Consensus       144 ~~~~~i~v~~~~~~  157 (182)
                      ..++.++..+|+..
T Consensus       194 ~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          194 RNNVLCNVIVPTAA  207 (613)
T ss_dssp             GGTEEEEEEEEC--
T ss_pred             ccCeEEEEEECCCC
Confidence            76555555577653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.89  E-value=1.6e-23  Score=164.47  Aligned_cols=143  Identities=14%  Similarity=0.041  Sum_probs=121.1

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCC-------------CCCCc---------------------
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIV-------------ASSSV---------------------   68 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~-------------~~~~~---------------------   68 (182)
                      +.++..+.||++|+++++++++.+.+ +|++|+||||||..             ...++                     
T Consensus       122 g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~  201 (418)
T 4eue_A          122 GLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKV  201 (418)
T ss_dssp             TCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEE
T ss_pred             CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccc
Confidence            55788999999999999999999999 99999999999974             22233                     


Q ss_pred             ccCCHHHHHHHHHHHhHHHH-HHHHHHhHHHHhCCCCeEEEEeccccccccCCC--chhhhhHHHHHHHHHHHHhhhCC-
Q psy5462          69 LAHTDHEIERIMDVNLMSNI-KMVREFLPDMLENNTGHIVCISSIAALTAAVNV--SAYFASKYGVTENHPSIKCFSGY-  144 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~--~~y~~sKaa~~~~~~~la~e~~~-  144 (182)
                      .+.+.++|+..+++|..+.+ .+++++.+.+...++|+||++||.++..+.+.+  +.|++||+|+.+|+++|+.|+++ 
T Consensus       202 ~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~  281 (418)
T 4eue_A          202 SSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRV  281 (418)
T ss_dssp             CBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            45689999999999999888 777877765444446899999999998888888  99999999999999999999997 


Q ss_pred             CccceeeeCCCcccccccccch
Q psy5462         145 MLWGTTVTTPLRSVTILYQRSV  166 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~~~  166 (182)
                      .++.+++.+|++..|+......
T Consensus       282 ~GIrVN~V~PG~v~T~~s~~ip  303 (418)
T 4eue_A          282 IGGRAFVSVNKALVTKASAYIP  303 (418)
T ss_dssp             HSCEEEEEECCCCCCHHHHTST
T ss_pred             cCeEEEEEECCcCcChhhhcCC
Confidence            6667777799998888766543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=1.7e-23  Score=154.78  Aligned_cols=152  Identities=20%  Similarity=0.200  Sum_probs=128.1

Q ss_pred             cccccccccceeccCCCC---CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP---TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+++...   .. +++.++ +|+  .++++++++.+   .++|++|||||.....++.+.+.++|+..+
T Consensus        37 ~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~-~D~--~~~~~~~~~~~---~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~  109 (249)
T 1o5i_A           37 DVLSQEGAEVTICARNEELLKRS-GHRYVV-CDL--RKDLDLLFEKV---KEVDILVLNAGGPKAGFFDELTNEDFKEAI  109 (249)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHT-CSEEEE-CCT--TTCHHHHHHHS---CCCSEEEECCCCCCCBCGGGCCHHHHHHHH
T ss_pred             HHHHHCCCEEEEEcCCHHHHHhh-CCeEEE-eeH--HHHHHHHHHHh---cCCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence            457778888887764321   11 256677 999  55677776665   479999999998877788889999999999


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++|+.++++++++++|.|++++.++||++||..++.+.++...|+++|++++.|+++++.|++..++.+++.+|++..++
T Consensus       110 ~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  189 (249)
T 1o5i_A          110 DSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETE  189 (249)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccC
Confidence            99999999999999999998878999999999999888899999999999999999999999876667777789888877


Q ss_pred             cc
Q psy5462         161 LY  162 (182)
Q Consensus       161 ~~  162 (182)
                      ..
T Consensus       190 ~~  191 (249)
T 1o5i_A          190 RV  191 (249)
T ss_dssp             TH
T ss_pred             cc
Confidence            64

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.89  E-value=1.5e-23  Score=154.58  Aligned_cols=157  Identities=16%  Similarity=0.147  Sum_probs=106.9

Q ss_pred             ccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           5 RTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +|.+ |+.+..+++....     ...++.++.+|+++.++ ...+..+.+ ++++|++|||||.....++.+.+.++|+.
T Consensus        24 ~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~  101 (245)
T 3e9n_A           24 DLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHA  101 (245)
T ss_dssp             HHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHH-TSSSCGGGTTCSCCSEEEECC----------CHHHHHHH
T ss_pred             HHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHH-HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHH
Confidence            3444 6666665532210     12468899999999887 444444445 88999999999998888888889999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      .+++|+.++++++++++|.|++++ |+||++||..++.+.++...|+++|++++.|+++++.|++..++.+.+.+|++..
T Consensus       102 ~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  180 (245)
T 3e9n_A          102 HLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTN  180 (245)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             HHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCcc
Confidence            999999999999999999998765 9999999999999999999999999999999999999998776777777899888


Q ss_pred             cccccc
Q psy5462         159 TILYQR  164 (182)
Q Consensus       159 ~~~~~~  164 (182)
                      +++...
T Consensus       181 t~~~~~  186 (245)
T 3e9n_A          181 TPMLQG  186 (245)
T ss_dssp             ------
T ss_pred             Cchhhh
Confidence            876543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.88  E-value=3.6e-23  Score=156.58  Aligned_cols=126  Identities=15%  Similarity=0.157  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc
Q psy5462          37 KAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA  113 (182)
Q Consensus        37 ~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~  113 (182)
                      +++++++++.+.+ +|++|+||||||...  ..++.+.+.++|+..+++|+.++++++++++|+|++  +|+||++||..
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~  180 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP--GGASISLTYIA  180 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc--CceEEEEeccc
Confidence            6689999999988 999999999999754  467788899999999999999999999999999865  38999999999


Q ss_pred             cccccCCC-chhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCccccccccc
Q psy5462         114 ALTAAVNV-SAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       114 ~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +..+.+.. ..|+++|+++..|+++++.|+++ .++.++..+|++..|++...
T Consensus       181 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          181 SERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             GTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            98888877 69999999999999999999974 56677777899888877544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.88  E-value=3.3e-23  Score=158.12  Aligned_cols=124  Identities=16%  Similarity=0.158  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc
Q psy5462          37 KAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA  113 (182)
Q Consensus        37 ~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~  113 (182)
                      +++++++++.+.+ ||++|+||||||...  ..++.+.+.++|+..+++|+.++++++++++|+|++  +|+||++||.+
T Consensus       104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~  181 (315)
T 2o2s_A          104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE--GGSAVTLSYLA  181 (315)
T ss_dssp             CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE--EEEEEEEEEGG
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc--CCEEEEEeccc
Confidence            6689999999988 999999999999764  467888999999999999999999999999999865  38999999999


Q ss_pred             cccccCCC-chhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCccccccc
Q psy5462         114 ALTAAVNV-SAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       114 ~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~~~~  162 (182)
                      +..+.++. ..|+++|+++.+|+++++.|+++ .++.++..+|+++.|++.
T Consensus       182 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  232 (315)
T 2o2s_A          182 AERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA  232 (315)
T ss_dssp             GTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred             ccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence            98887777 58999999999999999999974 566777779998888764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.88  E-value=4.6e-23  Score=155.61  Aligned_cols=152  Identities=20%  Similarity=0.168  Sum_probs=122.9

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|+++|+.|..+++..       ...+.++.++.+|++|+++++++++.+   +++|+||||||...+  ..+.+.++|
T Consensus        34 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~---~~iD~lv~nAg~~~~--~~~~~~~~~  108 (291)
T 3rd5_A           34 RELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV---SGADVLINNAGIMAV--PYALTVDGF  108 (291)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC---CCEEEEEECCCCCSC--CCCBCTTSC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc---CCCCEEEECCcCCCC--cccCCHHHH
Confidence            46778888888776432       233678999999999999999998876   789999999998653  345678889


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-------------cCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-------------AVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.++++|+.+++++++++.|+|.+    +||++||.+++.+             .++...|++||++++.|+++++.|++
T Consensus       109 ~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  184 (291)
T 3rd5_A          109 ESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLT  184 (291)
T ss_dssp             BHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998854    8999999987754             23457899999999999999999998


Q ss_pred             CCc--cceeeeCCCccccccccc
Q psy5462         144 YML--WGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       144 ~~~--~~i~v~~~~~~~~~~~~~  164 (182)
                      ...  +.+...+|+++.|++...
T Consensus       185 ~~g~~i~v~~v~PG~v~T~~~~~  207 (291)
T 3rd5_A          185 AAGSPLRALAAHPGYSHTNLQGA  207 (291)
T ss_dssp             HTTCCCEEEEECCSGGGSCC---
T ss_pred             hCCCCEEEEEeeCCCCccccccc
Confidence            655  444555799888877654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.88  E-value=1.6e-23  Score=160.05  Aligned_cols=125  Identities=17%  Similarity=0.192  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc
Q psy5462          37 KAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA  113 (182)
Q Consensus        37 ~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~  113 (182)
                      +++++++++.+.+ +|++|+||||||...  ..++.+.+.++|+.++++|+.++++++++++|+|++  .|+||++||..
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~  194 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIA  194 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc--CceEEEEeccc
Confidence            4588999999988 999999999999763  467888999999999999999999999999999975  38999999999


Q ss_pred             cccccCCC-chhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcccccccc
Q psy5462         114 ALTAAVNV-SAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       114 ~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~~~~~  163 (182)
                      +..+.+.. ..|+++|+++.+|+++|+.|+++ .++.+++.+|++..|++..
T Consensus       195 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~  246 (319)
T 2ptg_A          195 SEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS  246 (319)
T ss_dssp             ------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred             cccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence            88887777 69999999999999999999974 5667777799988887654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.87  E-value=6e-22  Score=141.79  Aligned_cols=145  Identities=16%  Similarity=0.086  Sum_probs=124.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|. +|+.+..+++...       .+.+|++|+++++++++.+   +++|++|||||.....++.+.+.++|+..+++|
T Consensus        21 ~~l~-~g~~V~~~~r~~~-------~~~~D~~~~~~~~~~~~~~---~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n   89 (202)
T 3d7l_A           21 ERLE-KKAEVITAGRHSG-------DVTVDITNIDSIKKMYEQV---GKVDAIVSATGSATFSPLTELTPEKNAVTISSK   89 (202)
T ss_dssp             HHHT-TTSEEEEEESSSS-------SEECCTTCHHHHHHHHHHH---CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTT
T ss_pred             HHHH-CCCeEEEEecCcc-------ceeeecCCHHHHHHHHHHh---CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhc
Confidence            3456 7888887765432       5789999999999998876   789999999998877778888999999999999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      +.+++++++++.+.|++  +++||++||..+..+.++...|+++|++++.+++.++.|+ ..++.+.+..|++..++..
T Consensus        90 ~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~  165 (202)
T 3d7l_A           90 LGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWD  165 (202)
T ss_dssp             THHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHH
T ss_pred             cHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchh
Confidence            99999999999998854  3899999999988888889999999999999999999998 5566777778888777653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.87  E-value=2.5e-21  Score=156.70  Aligned_cols=135  Identities=14%  Similarity=0.044  Sum_probs=117.4

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-  102 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-  102 (182)
                      +.++.++.||++|.+++.++++.+.++++||+||||||....+.+.+.+.++|+.++++|+.|++++.+++.+.+++++ 
T Consensus       314 g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~  393 (525)
T 3qp9_A          314 GATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR  393 (525)
T ss_dssp             TCEEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Confidence            5689999999999999999999886788999999999999888899999999999999999999999999999988776 


Q ss_pred             CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         103 TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       103 ~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      .++||++||.++..+.++...|+++|+++++|+    .++...++++...+|++..+.+.
T Consensus       394 ~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~  449 (525)
T 3qp9_A          394 PPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRV  449 (525)
T ss_dssp             CCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGG
T ss_pred             CCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccc
Confidence            689999999999999999999999999998875    45555566777778887766665

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.87  E-value=4.1e-22  Score=148.62  Aligned_cols=157  Identities=22%  Similarity=0.213  Sum_probs=126.1

Q ss_pred             ccccc-ccccceeccCCCC----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTG-HIHGILFIPWCLP----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~-~g~~v~~~~~~~~----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.+ +|+.+..+.+...          ..+.++.++.+|++|.++++++++.+.+ ++++|+||||||...... ...
T Consensus        22 ~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~-~~~  100 (276)
T 1wma_A           22 RDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVA-DPT  100 (276)
T ss_dssp             HHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTT-CCS
T ss_pred             HHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCC-Ccc
Confidence            35666 7888877764321          1256789999999999999999999999 999999999999875443 233


Q ss_pred             C-HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---------------------------------
Q psy5462          72 T-DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---------------------------------  117 (182)
Q Consensus        72 ~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---------------------------------  117 (182)
                      + .++++..+++|+.+++++++++.+.|++  .++||++||..++.+                                 
T Consensus       101 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  178 (276)
T 1wma_A          101 PFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT  178 (276)
T ss_dssp             CHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhh
Confidence            4 5899999999999999999999998865  479999999877632                                 


Q ss_pred             --------cCCCchhhhhHHHHHHHHHHHHhhhCC----CccceeeeCCCcccccccc
Q psy5462         118 --------AVNVSAYFASKYGVTENHPSIKCFSGY----MLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       118 --------~~~~~~y~~sKaa~~~~~~~la~e~~~----~~~~i~v~~~~~~~~~~~~  163 (182)
                              ..+...|+++|++++.+++.++.+++.    .++.+.+.+|++..+++..
T Consensus       179 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          179 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             cccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                    012389999999999999999999875    4567777789988877654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.86  E-value=2.1e-22  Score=149.20  Aligned_cols=149  Identities=19%  Similarity=0.128  Sum_probs=114.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+++.......  . +.+|++|+++++++++.+  ++++|+||||||.....       +.|+..+++|
T Consensus        19 ~~l~~~G~~V~~~~r~~~~~~~--~-~~~Dl~~~~~v~~~~~~~--~~~id~lv~~Ag~~~~~-------~~~~~~~~~N   86 (257)
T 1fjh_A           19 KVLEAAGHQIVGIDIRDAEVIA--D-LSTAEGRKQAIADVLAKC--SKGMDGLVLCAGLGPQT-------KVLGNVVSVN   86 (257)
T ss_dssp             HHHHHTTCEEEEEESSSSSEEC--C-TTSHHHHHHHHHHHHTTC--TTCCSEEEECCCCCTTC-------SSHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCchhhcc--c-cccCCCCHHHHHHHHHHh--CCCCCEEEECCCCCCCc-------ccHHHHHHHh
Confidence            4577889988887755432211  1 779999999988887632  37899999999976421       1288999999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccc----------------------------cccCCCchhhhhHHHHHHHH
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAAL----------------------------TAAVNVSAYFASKYGVTENH  135 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~----------------------------~~~~~~~~y~~sKaa~~~~~  135 (182)
                      +.++++++++++|+|++++.++||++||..++                            .+.++...|+++|++++.++
T Consensus        87 ~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~  166 (257)
T 1fjh_A           87 YFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV  166 (257)
T ss_dssp             THHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHH
Confidence            99999999999999998878999999999887                            34446789999999999999


Q ss_pred             HHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         136 PSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       136 ~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++++.|++..++.+.+.+|++..|+....
T Consensus       167 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~  195 (257)
T 1fjh_A          167 RKRAAAWGEAGVRLNTIAPGATETPLLQA  195 (257)
T ss_dssp             HHTHHHHHHTTCEEEEEEECC--------
T ss_pred             HHHHHHHhhcCeEEEEEeeCCCCCccchh
Confidence            99999998666677777898888776543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.84  E-value=9.1e-21  Score=135.99  Aligned_cols=128  Identities=17%  Similarity=0.144  Sum_probs=111.4

Q ss_pred             EEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE
Q psy5462          28 VYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV  107 (182)
Q Consensus        28 ~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii  107 (182)
                      .++.+|++|++++.++++.   ++++|++|||||.....++.+.+.++|+..+++|+.+++++++++    ++++.++||
T Consensus        45 ~~~~~D~~~~~~~~~~~~~---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv  117 (207)
T 2yut_A           45 RALPADLADELEAKALLEE---AGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAV  117 (207)
T ss_dssp             EECCCCTTSHHHHHHHHHH---HCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEE
T ss_pred             cEEEeeCCCHHHHHHHHHh---cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEE
Confidence            7889999999999999887   488999999999887777888899999999999999999999988    334468999


Q ss_pred             EEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         108 CISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       108 ~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      ++||..++.+.++...|+++|++++.++++++.|++..++++.+..|++..++..
T Consensus       118 ~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~  172 (207)
T 2yut_A          118 FFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLW  172 (207)
T ss_dssp             EECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG
T ss_pred             EEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc
Confidence            9999999888888999999999999999999999987777888889988777653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.82  E-value=3.5e-20  Score=164.48  Aligned_cols=156  Identities=13%  Similarity=0.026  Sum_probs=128.7

Q ss_pred             cccccccccceecc-CCC--------------CCCCceeEEEEccCCCHHHHHHHHHHHHh------cC-CccEEEEccc
Q psy5462           4 DRTTGHIHGILFIP-WCL--------------PTKTHVAVYFKADVSDKAEIKKLNENVRK------IG-YVDILINNAG   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~--------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~------~~-~id~li~~ag   61 (182)
                      ++|.++|+.|.++. +..              ...+.++.++.||++|.++++++++.+.+      +| ++|+||||||
T Consensus       694 ~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAG  773 (1887)
T 2uv8_A          694 QGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAA  773 (1887)
T ss_dssp             HHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCC
T ss_pred             HHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCC
Confidence            45677888887763 211              12367899999999999999999998764      34 8999999999


Q ss_pred             CCCCC-CcccCC--HHHHHHHHHHHhHHHHHHHHHH--hHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHH-H
Q psy5462          62 IVASS-SVLAHT--DHEIERIMDVNLMSNIKMVREF--LPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTEN-H  135 (182)
Q Consensus        62 ~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~-~  135 (182)
                      ....+ ++.+.+  .++|+.++++|+.+++.+++++  .|.|++++.|+||++||..+..+  +...|+++|+++.+| +
T Consensus       774 i~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~~Ltt  851 (1887)
T 2uv8_A          774 IPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFN  851 (1887)
T ss_dssp             CCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHH
T ss_pred             cCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--CCchHHHHHHHHHHHHH
Confidence            98777 788888  8999999999999999999988  78887776789999999988776  678999999999999 9


Q ss_pred             HHHHhhhCCCccceeeeCCCccc-cccc
Q psy5462         136 PSIKCFSGYMLWGTTVTTPLRSV-TILY  162 (182)
Q Consensus       136 ~~la~e~~~~~~~i~v~~~~~~~-~~~~  162 (182)
                      +.++.+++.. +.++..+|+++. |.+.
T Consensus       852 r~lA~ela~~-IrVNaV~PG~V~tT~m~  878 (1887)
T 2uv8_A          852 RWHSESWANQ-LTVCGAIIGWTRGTGLM  878 (1887)
T ss_dssp             HHHHSSCTTT-EEEEEEEECCEECC---
T ss_pred             HHHHHHhCCC-eEEEEEEeccccccccc
Confidence            9999999875 666677888887 5544

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.81  E-value=2.5e-20  Score=161.49  Aligned_cols=155  Identities=14%  Similarity=0.026  Sum_probs=127.7

Q ss_pred             cccccccccceecc-CCC--------------CCCCceeEEEEccCCCHHHHHHHHHHHHh------cC-CccEEEEccc
Q psy5462           4 DRTTGHIHGILFIP-WCL--------------PTKTHVAVYFKADVSDKAEIKKLNENVRK------IG-YVDILINNAG   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~-~~~--------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~------~~-~id~li~~ag   61 (182)
                      ++|+++|+.|.++. +..              ...+.++.++.||++|.++++++++.+.+      +| ++|+||||||
T Consensus       495 r~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAG  574 (1688)
T 2pff_A          495 QGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAA  574 (1688)
T ss_dssp             HHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCC
T ss_pred             HHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCC
Confidence            45677888887762 211              11256889999999999999999998765      35 7999999999


Q ss_pred             CCCCC-CcccCC--HHHHHHHHHHHhHHHHHHHHHH--hHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHH-H
Q psy5462          62 IVASS-SVLAHT--DHEIERIMDVNLMSNIKMVREF--LPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTEN-H  135 (182)
Q Consensus        62 ~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~-~  135 (182)
                      ....+ ++.+.+  .++|+.++++|+.+++.+++++  .|.|++++.|+||++||.++..+  +...|++||+++.+| +
T Consensus       575 I~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--g~saYaASKAAL~aLtt  652 (1688)
T 2pff_A          575 IPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFN  652 (1688)
T ss_dssp             CCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHH
T ss_pred             cCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--CchHHHHHHHHHHHHHH
Confidence            88776 788888  8999999999999999999998  88888776789999999988776  678999999999999 8


Q ss_pred             HHHHhhhCCCccceeeeCCCccc-ccc
Q psy5462         136 PSIKCFSGYMLWGTTVTTPLRSV-TIL  161 (182)
Q Consensus       136 ~~la~e~~~~~~~i~v~~~~~~~-~~~  161 (182)
                      +.++.+++.. +.++..+|+++. |.+
T Consensus       653 rsLAeEla~~-IRVNaVaPG~V~TT~M  678 (1688)
T 2pff_A          653 RWHSESWANQ-LTVCGAIIGWTRGTGL  678 (1688)
T ss_dssp             HTTTSSCTTT-EECCCCCCCCCCCCSS
T ss_pred             HHHHHHcCCC-eEEEEEEECcCcCCcc
Confidence            8889998865 566666888777 444

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.81  E-value=1.8e-20  Score=157.99  Aligned_cols=148  Identities=11%  Similarity=0.077  Sum_probs=122.0

Q ss_pred             cccc-ccccc-ceeccCC-------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC
Q psy5462           4 DRTT-GHIHG-ILFIPWC-------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~-~~g~~-v~~~~~~-------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~   67 (182)
                      ++|. ++|++ +..+.+.             +...+.++.++.||++|+++++++++.+.+ + +||++|||||......
T Consensus       548 ~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~~~  626 (795)
T 3slk_A          548 RHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDDGV  626 (795)
T ss_dssp             HHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCCCC
T ss_pred             HHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCc
Confidence            4566 78886 4444433             123477899999999999999999999888 7 8999999999998889


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+++.++|+..+++|+.|++++++++.+.|      +||++||.++..+.+++..|+++|+++    ++|+.+++..++
T Consensus       627 ~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka~~----~alA~~~~~~Gi  696 (795)
T 3slk_A          627 SESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANSFL----DALAQQRQSRGL  696 (795)
T ss_dssp             GGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHHHH----HHHHHHHHHTTC
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHHHH----HHHHHHHHHcCC
Confidence            9999999999999999999999999997766      799999999999999999999999754    555555555566


Q ss_pred             ceeeeCCCccccccc
Q psy5462         148 GTTVTTPLRSVTILY  162 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~  162 (182)
                      +++..+|++..+...
T Consensus       697 ~v~sI~pG~v~t~g~  711 (795)
T 3slk_A          697 PTRSLAWGPWAEHGM  711 (795)
T ss_dssp             CEEEEEECCCSCCCH
T ss_pred             eEEEEECCeECcchh
Confidence            777778887665543

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.80  E-value=2e-19  Score=159.39  Aligned_cols=157  Identities=13%  Similarity=0.041  Sum_probs=128.1

Q ss_pred             cccccccccceeccCC---------------CCCCCceeEEEEccCCCHHHHHHHHHHHHh----cC-CccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWC---------------LPTKTHVAVYFKADVSDKAEIKKLNENVRK----IG-YVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~---------------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~----~~-~id~li~~ag~~   63 (182)
                      ++|.++|+.|.++...               +...+.++.++.||++|.+++.++++.+.+    +| +||+||||||..
T Consensus       671 r~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~  750 (1878)
T 2uv9_A          671 QGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIP  750 (1878)
T ss_dssp             HHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCC
T ss_pred             HHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccc
Confidence            4677788888776321               112367899999999999999999998764    57 899999999998


Q ss_pred             CCC-CcccCC--HHHHHHHHHHHhHHHHHHHHH--HhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHH
Q psy5462          64 ASS-SVLAHT--DHEIERIMDVNLMSNIKMVRE--FLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        64 ~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ..+ ++.+.+  .++|+.++++|+.+++.+++.  +.+.|.+++.|+||++||.++..+  +...|+++|+++.+|++.+
T Consensus       751 ~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~l  828 (1878)
T 2uv9_A          751 ENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--NDGLYSESKLALETLFNRW  828 (1878)
T ss_dssp             CTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHH
T ss_pred             cCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHH
Confidence            776 788888  899999999999999999987  778887766789999999998776  4689999999999999876


Q ss_pred             Hh-hhCCCccceeeeCCCccc-ccccc
Q psy5462         139 KC-FSGYMLWGTTVTTPLRSV-TILYQ  163 (182)
Q Consensus       139 a~-e~~~~~~~i~v~~~~~~~-~~~~~  163 (182)
                      +. +++.. +.++.++|+++. |.+..
T Consensus       829 aAeEla~~-IrVNaVaPG~V~gT~m~~  854 (1878)
T 2uv9_A          829 YSESWGNY-LTICGAVIGWTRGTGLMS  854 (1878)
T ss_dssp             HHSTTTTT-EEEEEEEECCBCCTTSCS
T ss_pred             HHHHcCCC-eEEEEEEecceecCcccc
Confidence            55 57765 666677888877 66543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.80  E-value=2.6e-19  Score=143.67  Aligned_cols=128  Identities=13%  Similarity=0.040  Sum_probs=110.7

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN  101 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~  101 (182)
                      .+.++.++.||++|++++.++++.+.+.+++|+||||||.. ....+.+.+.++|+.++++|+.+++++.+.+.+.    
T Consensus       290 ~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----  365 (496)
T 3mje_A          290 LGVRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL----  365 (496)
T ss_dssp             TTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----
T ss_pred             cCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence            46789999999999999999999876645799999999998 6778899999999999999999999999987653    


Q ss_pred             CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         102 NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       102 ~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ..++||++||.++..+.++...|+++|+++++|++.++..    +++++..+|++..
T Consensus       366 ~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~~~~~----Gi~v~sV~pG~w~  418 (496)
T 3mje_A          366 DLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHRRSL----GLTASSVAWGTWG  418 (496)
T ss_dssp             CCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TCCCEEEEECEES
T ss_pred             CCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHHHHhc----CCeEEEEECCccc
Confidence            4689999999999999999999999999999998876543    4566777777543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.79  E-value=2.2e-19  Score=132.45  Aligned_cols=148  Identities=18%  Similarity=0.082  Sum_probs=118.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+++.......   .+.+|++|+++++++++.+  .+++|+||||||....       .+.++..+++|
T Consensus        19 ~~L~~~g~~V~~~~r~~~~~~~---~~~~D~~~~~~~~~~~~~~--~~~~d~vi~~Ag~~~~-------~~~~~~~~~~N   86 (255)
T 2dkn_A           19 ELLARAGHTVIGIDRGQADIEA---DLSTPGGRETAVAAVLDRC--GGVLDGLVCCAGVGVT-------AANSGLVVAVN   86 (255)
T ss_dssp             HHHHHTTCEEEEEESSSSSEEC---CTTSHHHHHHHHHHHHHHH--TTCCSEEEECCCCCTT-------SSCHHHHHHHH
T ss_pred             HHHHhCCCEEEEEeCChhHccc---cccCCcccHHHHHHHHHHc--CCCccEEEECCCCCCc-------chhHHHHHHHH
Confidence            4567789988888765432211   2779999999998888754  3689999999997542       12378899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc--------------------------CCCchhhhhHHHHHHHHHH
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA--------------------------VNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~--------------------------~~~~~y~~sKaa~~~~~~~  137 (182)
                      +.+++++++++.+.|++.+.++||++||..++.+.                          ++...|+.+|++++.+++.
T Consensus        87 ~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~  166 (255)
T 2dkn_A           87 YFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARR  166 (255)
T ss_dssp             THHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHH
Confidence            99999999999999988777999999998877543                          4567999999999999999


Q ss_pred             HHhhhCCCccceeeeCCCcccccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~~~~  163 (182)
                      ++.+++...+.+.+..|++..++...
T Consensus       167 ~~~~~~~~gi~v~~v~pg~v~~~~~~  192 (255)
T 2dkn_A          167 NVVDWAGRGVRLNVVAPGAVETPLLQ  192 (255)
T ss_dssp             THHHHHHTTCEEEEEEECCBCSHHHH
T ss_pred             HHHHHhhcCcEEEEEcCCcccchhhh
Confidence            99998765667778888887776543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.75  E-value=4.6e-18  Score=136.50  Aligned_cols=148  Identities=12%  Similarity=0.029  Sum_probs=120.2

Q ss_pred             ccccccccc-ceeccCCC-------------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHG-ILFIPWCL-------------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~~~-------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+. +..+.+..             ...+.++.++.||++|++++.++++.+.+++++|+||||||....+.+.
T Consensus       244 ~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~  323 (486)
T 2fr1_A          244 RWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVD  323 (486)
T ss_dssp             HHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGG
T ss_pred             HHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCCCccc
Confidence            456677775 55444322             2236789999999999999999999983388999999999998888888


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++++.++++|+.+++++.+++.+    .+.++||++||.++..+.++...|+++|++++.|++.++..    +.++
T Consensus       324 ~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~~~~----gi~v  395 (486)
T 2fr1_A          324 TLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD----GLPA  395 (486)
T ss_dssp             GCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHHHT----TCCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHHHhc----CCeE
Confidence            999999999999999999999998754    35689999999999999999999999999999998776543    4566


Q ss_pred             eeeCCCcccc
Q psy5462         150 TVTTPLRSVT  159 (182)
Q Consensus       150 ~v~~~~~~~~  159 (182)
                      .+.+|++..+
T Consensus       396 ~~i~pG~~~~  405 (486)
T 2fr1_A          396 TAVAWGTWAG  405 (486)
T ss_dssp             EEEEECCBC-
T ss_pred             EEEECCeeCC
Confidence            6667765544

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.73  E-value=7.3e-17  Score=120.18  Aligned_cols=135  Identities=14%  Similarity=0.058  Sum_probs=105.5

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+++.... .+.++.++.+|++|++++.++++      ++|+||||||...        .+.|+..+++
T Consensus        21 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~vi~~Ag~~~--------~~~~~~~~~~   86 (267)
T 3rft_A           21 ERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA------GCDGIVHLGGISV--------EKPFEQILQG   86 (267)
T ss_dssp             HHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT------TCSEEEECCSCCS--------CCCHHHHHHH
T ss_pred             HHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc------CCCEEEECCCCcC--------cCCHHHHHHH
Confidence            5678889998888765432 35789999999999999988876      4899999999842        2347789999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc------------cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAAL------------TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~------------~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      |+.+++++++++.+    .+.++||++||..++            .+.++...|+.+|++.+.+++.++.+++.   .+.
T Consensus        87 N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~---~~~  159 (267)
T 3rft_A           87 NIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ---ETA  159 (267)
T ss_dssp             HTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCC---CEE
T ss_pred             HHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCC---eEE
Confidence            99999999999843    456899999998876            33455689999999999999999998764   334


Q ss_pred             eeCCCcccc
Q psy5462         151 VTTPLRSVT  159 (182)
Q Consensus       151 v~~~~~~~~  159 (182)
                      +..|+...+
T Consensus       160 ~vr~~~v~~  168 (267)
T 3rft_A          160 LVRIGSCTP  168 (267)
T ss_dssp             EEEECBCSS
T ss_pred             EEEeecccC
Confidence            444443333

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.71  E-value=9.1e-17  Score=129.59  Aligned_cols=148  Identities=11%  Similarity=0.001  Sum_probs=117.9

Q ss_pred             ccccccccc-ceeccCCC-------------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHG-ILFIPWCL-------------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~~~-------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+. +..+.+..             ...+.++.++.||++|.+++.++++.    +++|+||||||....+.+.
T Consensus       277 ~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----~~ld~VVh~AGv~~~~~~~  352 (511)
T 2z5l_A          277 RRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----YPPNAVFHTAGILDDAVID  352 (511)
T ss_dssp             HHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----SCCSEEEECCCCCCCBCGG
T ss_pred             HHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----CCCcEEEECCcccCCcccc
Confidence            456677774 44443321             23467899999999999999999887    6899999999998888888


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++++.++++|+.+++++.+++.+.   .+.++||++||.++..+.++...|+++|++++.|++.++.+    +.++
T Consensus       353 ~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~~~~----gi~v  425 (511)
T 2z5l_A          353 TLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERRRAA----GLPA  425 (511)
T ss_dssp             GCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHHHTT----TCCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHc----CCcE
Confidence            8999999999999999999999876432   14589999999999999999999999999999999976532    4566


Q ss_pred             eeeCCCcc-ccccc
Q psy5462         150 TVTTPLRS-VTILY  162 (182)
Q Consensus       150 ~v~~~~~~-~~~~~  162 (182)
                      .+.+|++. .+.+.
T Consensus       426 ~sv~pG~~~~tgm~  439 (511)
T 2z5l_A          426 TSVAWGLWGGGGMA  439 (511)
T ss_dssp             EEEEECCBCSTTCC
T ss_pred             EEEECCcccCCccc
Confidence            66677655 44443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.71  E-value=7.6e-18  Score=155.10  Aligned_cols=135  Identities=10%  Similarity=0.006  Sum_probs=101.1

Q ss_pred             ccccccccc-ceeccCCCC-------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHG-ILFIPWCLP-------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~~~~-------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|++ +....+...             ..+.++.++.||++|.++++++++.+.++|+||+||||||.....++.
T Consensus      1902 ~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~ 1981 (2512)
T 2vz8_A         1902 QWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLE 1981 (2512)
T ss_dssp             HHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC-------
T ss_pred             HHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCCCchh
Confidence            567788887 444333221             236689999999999999999999886688999999999998778889


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHh
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      +++.++|+.++++|+.|++++.+++.+.|.+.  ++||++||.++..+.++...|+++|+++++|++.++.
T Consensus      1982 ~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr~ 2050 (2512)
T 2vz8_A         1982 NQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRH 2050 (2512)
T ss_dssp             ---------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999887553  8999999999999999999999999999999994443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.63  E-value=1.1e-15  Score=141.33  Aligned_cols=152  Identities=14%  Similarity=0.004  Sum_probs=108.7

Q ss_pred             cccccccccceeccCCC---------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-----cCCccEEEEcccC-
Q psy5462           4 DRTTGHIHGILFIPWCL---------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-----IGYVDILINNAGI-   62 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-----~~~id~li~~ag~-   62 (182)
                      +.|+++|+.|.+.+...               ...+.++..+.||++|+++++++++.+.+     ||++|+||||||. 
T Consensus      2155 ~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~ 2234 (3089)
T 3zen_D         2155 GQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTP 2234 (3089)
T ss_dssp             HHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCC
T ss_pred             HHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcc
Confidence            45778888888775432               23466889999999999999999998764     6899999999997 


Q ss_pred             ---CCC-CCcccCCHHHH----HHHHHHHhHHHHHHHHHHhHHHHhCCCC----eEEEEeccccccccCCCchhhhhHHH
Q psy5462          63 ---VAS-SSVLAHTDHEI----ERIMDVNLMSNIKMVREFLPDMLENNTG----HIVCISSIAALTAAVNVSAYFASKYG  130 (182)
Q Consensus        63 ---~~~-~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~l~~~~~~----~ii~iss~~~~~~~~~~~~y~~sKaa  130 (182)
                         ... ....+.+.++|    +..+++|+.+++.+++.+.+.|.+++.+    .|+.+++..+.  .+....|++||+|
T Consensus      2235 d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g~--~g~~~aYsASKaA 2312 (3089)
T 3zen_D         2235 TLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRGM--FGGDGAYGEAKSA 2312 (3089)
T ss_dssp             SEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTTS--CSSCSSHHHHGGG
T ss_pred             cccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCccccc--CCCchHHHHHHHH
Confidence               211 22233333334    4459999999999999999999876532    22233333222  2345689999999


Q ss_pred             HHHHHHHHHhh--hCCCccceeeeCCCccc
Q psy5462         131 VTENHPSIKCF--SGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       131 ~~~~~~~la~e--~~~~~~~i~v~~~~~~~  158 (182)
                      +.+|+++|+.|  ++.. +.++...|+++.
T Consensus      2313 l~~LtrslA~E~~~a~~-IrVn~v~PG~v~ 2341 (3089)
T 3zen_D         2313 LDALENRWSAEKSWAER-VSLAHALIGWTK 2341 (3089)
T ss_dssp             HHHHHHHHHHCSTTTTT-EEEEEEECCCEE
T ss_pred             HHHHHHHHHhccccCCC-eEEEEEeecccC
Confidence            99999999999  7652 344444666655

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.58  E-value=2e-14  Score=109.30  Aligned_cols=145  Identities=14%  Similarity=0.052  Sum_probs=107.4

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+.......++.++.+|++|++++.++++.    +++|+|||+||.....    .+.++++..+++|
T Consensus        30 ~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~----~~~d~vih~A~~~~~~----~~~~~~~~~~~~N  101 (321)
T 2pk3_A           30 NHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD----IKPDYIFHLAAKSSVK----DSWLNKKGTFSTN  101 (321)
T ss_dssp             HHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHH----HCCSEEEECCSCCCHH----HHTTCHHHHHHHH
T ss_pred             HHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHh----cCCCEEEEcCcccchh----hhhhcHHHHHHHH
Confidence            4567789988887754432111678899999999999998876    3689999999975421    1223578899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-------------cCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++.++++++ +.+  .+.++||++||.+.+.+             .++...|+.+|++.+.+++.++.+.+   .++.
T Consensus       102 v~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g---i~~~  175 (321)
T 2pk3_A          102 VFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYG---MDII  175 (321)
T ss_dssp             HHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHHC---CEEE
T ss_pred             HHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHcC---CCEE
Confidence            99999999999 444  24589999999875432             24567999999999999999998853   3566


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      +..|++...+..
T Consensus       176 ilrp~~v~g~~~  187 (321)
T 2pk3_A          176 HTRTFNHIGPGQ  187 (321)
T ss_dssp             EEEECEEECTTC
T ss_pred             EEEeCcccCcCC
Confidence            666665544433

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.58  E-value=2e-14  Score=110.19  Aligned_cols=141  Identities=16%  Similarity=0.151  Sum_probs=105.7

Q ss_pred             cccccccccceeccCCCCCC-----------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..+++.....           +.++.++.+|++|++++.++++.    +++|++|||||......    .
T Consensus        23 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~~~d~vih~A~~~~~~~----~   94 (341)
T 3enk_A           23 VELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA----HPITAAIHFAALKAVGE----S   94 (341)
T ss_dssp             HHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH----SCCCEEEECCCCCCHHH----H
T ss_pred             HHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc----cCCcEEEECccccccCc----c
Confidence            46778899988887544332           34788999999999999999886    46999999999864322    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      .+.....+++|+.++.++++++    ++.+.++||++||...+.           +..+...|+.+|++.+.+++.++.+
T Consensus        95 ~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~  170 (341)
T 3enk_A           95 VAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAA  170 (341)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhc
Confidence            3445577899999999988876    444567999999977652           2223479999999999999999998


Q ss_pred             hCCCccceeeeCCCccc
Q psy5462         142 SGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       142 ~~~~~~~i~v~~~~~~~  158 (182)
                      ++  ..++.+..|+...
T Consensus       171 ~~--~~~~~~lRp~~v~  185 (341)
T 3enk_A          171 DP--SWRVATLRYFNPV  185 (341)
T ss_dssp             CT--TCEEEEEEECEEE
T ss_pred             CC--CceEEEEeecccc
Confidence            65  3466666655433

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.55  E-value=7.1e-14  Score=107.85  Aligned_cols=147  Identities=16%  Similarity=0.047  Sum_probs=107.9

Q ss_pred             ccccc-cccceeccCCCC--------C--CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           5 RTTGH-IHGILFIPWCLP--------T--KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         5 ~l~~~-g~~v~~~~~~~~--------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      +|.++ |+.|..+++...        .  .+.++.++.+|++|++++.++++..    ++|+|||+||....    +.+.
T Consensus        19 ~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~----~~~~   90 (361)
T 1kew_A           19 HIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY----QPDAVMHLAAESHV----DRSI   90 (361)
T ss_dssp             HHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCH----HHHH
T ss_pred             HHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc----CCCEEEECCCCcCh----hhhh
Confidence            44555 677776654221        1  1357889999999999999988763    69999999997532    1234


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCC-----CCeEEEEecccccc---------------------ccCCCchhhhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENN-----TGHIVCISSIAALT---------------------AAVNVSAYFAS  127 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~ii~iss~~~~~---------------------~~~~~~~y~~s  127 (182)
                      ++++..+++|+.++.++++++.+.|..-+     .++||++||.+.+.                     +..+...|+.+
T Consensus        91 ~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~s  170 (361)
T 1kew_A           91 TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS  170 (361)
T ss_dssp             HCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHH
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHH
Confidence            56788999999999999999998865321     25999999976431                     12356799999


Q ss_pred             HHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462         128 KYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus       128 Kaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |++.+.+++.++.+++   .++.+..|+...++..
T Consensus       171 K~~~e~~~~~~~~~~g---i~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          171 KASSDHLVRAWRRTYG---LPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             HHHHHHHHHHHHHHHC---CCEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHHHHhC---CcEEEEeeceeECCCC
Confidence            9999999999998864   4666677766555443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.55  E-value=3.5e-14  Score=108.71  Aligned_cols=128  Identities=10%  Similarity=-0.069  Sum_probs=99.9

Q ss_pred             cccccccccceeccCCCCCC----------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|..+++.....          ..++.++.+|++|++++.++++.+    ++|+|||+||....    +.+.
T Consensus        21 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~----~~~~   92 (345)
T 2z1m_A           21 KLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----QPDEVYNLAAQSFV----GVSF   92 (345)
T ss_dssp             HHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----CCSEEEECCCCCCH----HHHT
T ss_pred             HHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc----CCCEEEECCCCcch----hhhh
Confidence            45677899888887544321          236889999999999999998876    58999999997532    1123


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccc-----------cccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAAL-----------TAAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~-----------~~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      ++++..+++|+.++.++++++.+.    + .++||++||.+.+           .+..+...|+.+|++.+.+++.++.+
T Consensus        93 ~~~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (345)
T 2z1m_A           93 EQPILTAEVDAIGVLRILEALRTV----KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREA  168 (345)
T ss_dssp             TSHHHHHHHHTHHHHHHHHHHHHH----CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHh----CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            457888999999999999999752    3 3799999998643           23345679999999999999999998


Q ss_pred             hC
Q psy5462         142 SG  143 (182)
Q Consensus       142 ~~  143 (182)
                      ++
T Consensus       169 ~~  170 (345)
T 2z1m_A          169 YN  170 (345)
T ss_dssp             HC
T ss_pred             hC
Confidence            76

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.54  E-value=8.9e-14  Score=107.25  Aligned_cols=147  Identities=12%  Similarity=-0.057  Sum_probs=110.8

Q ss_pred             cccccccccceeccCCCCCC---------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+.+.....         +.++.++.+|++|++++.++++.+    ++|+|||+||...    .+.+.+
T Consensus        27 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~----~~~~~~   98 (357)
T 1rkx_A           27 LWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF----QPEIVFHMAAQPL----VRLSYS   98 (357)
T ss_dssp             HHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCC----HHHHHH
T ss_pred             HHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc----CCCEEEECCCCcc----cccchh
Confidence            45677888888877544321         357889999999999999998875    5899999999632    122456


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc------------ccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT------------AAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~------------~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      ++...+++|+.++.++++++.+.   .+.++||++||...+.            +..+...|+.+|.+.+.+++.++.++
T Consensus        99 ~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  175 (357)
T 1rkx_A           99 EPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF  175 (357)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            67889999999999999998753   2257999999976432            23356799999999999999999887


Q ss_pred             C------CCccceeeeCCCcccccc
Q psy5462         143 G------YMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       143 ~------~~~~~i~v~~~~~~~~~~  161 (182)
                      .      ....++.+..|++...+.
T Consensus       176 ~~~~~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          176 FNPANYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             SCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             hhhhccccCCceEEEEeeceeeCCC
Confidence            3      224567777777665543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.53  E-value=1.3e-13  Score=107.04  Aligned_cols=131  Identities=12%  Similarity=-0.063  Sum_probs=99.4

Q ss_pred             cccccccccceeccCCCCC----------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|..+.+....                .+.++.++.+|++|++++.++++.+    ++|+|||+||..... 
T Consensus        42 ~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~~-  116 (375)
T 1t2a_A           42 EFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV----KPTEIYNLGAQSHVK-  116 (375)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHH-
T ss_pred             HHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc----CCCEEEECCCccccc-
Confidence            4566778888877654321                2346889999999999999998876    589999999974321 


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~  136 (182)
                         .+.++++..+++|+.++.++++++.+...+ +.++||++||...+..           ..+...|+.+|++.+.+++
T Consensus       117 ---~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  192 (375)
T 1t2a_A          117 ---ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV  192 (375)
T ss_dssp             ---HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHH
Confidence               134667889999999999999999765321 2379999999876532           2245789999999999999


Q ss_pred             HHHhhhC
Q psy5462         137 SIKCFSG  143 (182)
Q Consensus       137 ~la~e~~  143 (182)
                      .++.+++
T Consensus       193 ~~~~~~~  199 (375)
T 1t2a_A          193 NFREAYN  199 (375)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9998865

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.53  E-value=8.1e-14  Score=106.87  Aligned_cols=144  Identities=13%  Similarity=0.019  Sum_probs=108.2

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|..+++....          ..+++.++.+|++|++++.++++..    ++|+|||+||....    +.+.
T Consensus        19 ~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~----~~~~   90 (347)
T 1orr_A           19 SFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY----MPDSCFHLAGQVAM----TTSI   90 (347)
T ss_dssp             HHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH----CCSEEEECCCCCCH----HHHH
T ss_pred             HHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc----CCCEEEECCcccCh----hhhh
Confidence            4567788888887653211          1235889999999999999988763    58999999997432    1234


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc---------------------------ccCCCchhhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT---------------------------AAVNVSAYFA  126 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~---------------------------~~~~~~~y~~  126 (182)
                      ++++..+++|+.++.++++++.+...   +++||++||.+.+.                           +..+...|+.
T Consensus        91 ~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~  167 (347)
T 1orr_A           91 DNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGC  167 (347)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHH
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHH
Confidence            56788999999999999999987542   26999999976542                           1235678999


Q ss_pred             hHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         127 SKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       127 sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +|++.+.+++.++.+++   .++.+..|++..++.
T Consensus       168 sK~~~E~~~~~~~~~~g---i~~~ilrp~~v~g~~  199 (347)
T 1orr_A          168 SKGAADQYMLDYARIFG---LNTVVFRHSSMYGGR  199 (347)
T ss_dssp             HHHHHHHHHHHHHHHHC---CEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHhC---CcEEEEccCceeCcC
Confidence            99999999999998863   466666777655544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.51  E-value=1.5e-13  Score=106.44  Aligned_cols=132  Identities=14%  Similarity=0.012  Sum_probs=98.9

Q ss_pred             cccccccccceeccCCCCC---------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+.+....               .+.++.++.+|++|++++.++++.+    ++|+||||||.....  
T Consensus        19 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~~--   92 (372)
T 1db3_A           19 EFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----QPDEVYNLGAMSHVA--   92 (372)
T ss_dssp             HHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----CCSEEEECCCCCTTT--
T ss_pred             HHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----CCCEEEECCcccCcc--
Confidence            4566778888877644221               1357889999999999999998876    589999999975432  


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~  137 (182)
                        .+.+++...+++|+.++.++++++.+...+ +.++||++||.+.+.+           ..+...|+.+|++.+.+++.
T Consensus        93 --~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  169 (372)
T 1db3_A           93 --VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN  169 (372)
T ss_dssp             --TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             --ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHH
Confidence              234456788999999999999999775322 2379999999765432           12467899999999999999


Q ss_pred             HHhhhCC
Q psy5462         138 IKCFSGY  144 (182)
Q Consensus       138 la~e~~~  144 (182)
                      ++.+++-
T Consensus       170 ~~~~~~~  176 (372)
T 1db3_A          170 YRESYGM  176 (372)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhCC
Confidence            9988653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.51  E-value=1.5e-13  Score=107.41  Aligned_cols=117  Identities=15%  Similarity=0.139  Sum_probs=90.3

Q ss_pred             eEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeE
Q psy5462          27 AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHI  106 (182)
Q Consensus        27 ~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i  106 (182)
                      +.++.+|++|++++.++++.   ++++|+|||+||......    +.++++..+++|+.++.++++++..    .+.++|
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~---~~~~d~vih~A~~~~~~~----~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~i  139 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTR---HGPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKCDKI  139 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHH---SCCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEE
T ss_pred             EEEEECCCCCHHHHHHHHHh---cCCCCEEEECCCccCcCc----chhhHHHHHHHHhHHHHHHHHHHHH----hCCCEE
Confidence            88999999999998888764   356999999999754321    3456788999999999999998743    355799


Q ss_pred             EEEeccccccccC------------------CCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462         107 VCISSIAALTAAV------------------NVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       107 i~iss~~~~~~~~------------------~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      |++||.+.+....                  +...|+.+|++.+.+++.++.+++   .++.+..|++.
T Consensus       140 v~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g---i~~~ilRp~~v  205 (397)
T 1gy8_A          140 IFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG---IKGICLRYFNA  205 (397)
T ss_dssp             EEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECEE
T ss_pred             EEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHC---CcEEEEeccce
Confidence            9999976542211                  257999999999999999999863   35566666544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.50  E-value=2.2e-13  Score=104.09  Aligned_cols=120  Identities=12%  Similarity=0.072  Sum_probs=93.7

Q ss_pred             cccccccccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+.+.....      -.++.++.+|++|++++.++++.+    ++|+||||||.....     +.++++
T Consensus        38 ~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~----~~D~vih~A~~~~~~-----~~~~~~  108 (330)
T 2pzm_A           38 EHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF----KPTHVVHSAAAYKDP-----DDWAED  108 (330)
T ss_dssp             HHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH----CCSEEEECCCCCSCT-----TCHHHH
T ss_pred             HHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc----CCCEEEECCccCCCc-----cccChh
Confidence            45777899888877533211      146889999999999999988865    599999999976432     344555


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----C------CCchhhhhHHHHHHHHHHH
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----V------NVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----~------~~~~y~~sKaa~~~~~~~l  138 (182)
                        +++|+.++.++++++..    .+.++||++||.+.+.+.     +      +...|+.+|++.+.+++.+
T Consensus       109 --~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          109 --AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             --HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence              89999999999999864    345799999998765433     2      5679999999999999887

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.50  E-value=2.1e-13  Score=104.26  Aligned_cols=141  Identities=14%  Similarity=0.055  Sum_probs=102.8

Q ss_pred             cccccc--ccceeccCCCC--------C--CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           5 RTTGHI--HGILFIPWCLP--------T--KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         5 ~l~~~g--~~v~~~~~~~~--------~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      +|.++|  +.|..+++...        .  .+.++.++.+|++|++++.+++.      ++|+|||+||....    +.+
T Consensus        22 ~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~A~~~~~----~~~   91 (336)
T 2hun_A           22 YILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR------KVDGVVHLAAESHV----DRS   91 (336)
T ss_dssp             HHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH------TCSEEEECCCCCCH----HHH
T ss_pred             HHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh------CCCEEEECCCCcCh----hhh
Confidence            455565  66666553211        1  14578899999999999888772      58999999997532    123


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      .++++..+++|+.++.++++++.+.   ...++||++||...+.           +..+...|+.+|++.+.+++.++.+
T Consensus        92 ~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (336)
T 2hun_A           92 ISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRT  168 (336)
T ss_dssp             HHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            4567788999999999999999875   2237999999976432           2345679999999999999999988


Q ss_pred             hCCCccceeeeCCCcccccc
Q psy5462         142 SGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       142 ~~~~~~~i~v~~~~~~~~~~  161 (182)
                      ++   .++.+..|+....+.
T Consensus       169 ~~---~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          169 YN---LNASITRCTNNYGPY  185 (336)
T ss_dssp             TT---CEEEEEEECEEESTT
T ss_pred             hC---CCEEEEeeeeeeCcC
Confidence            63   466666676655444

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.50  E-value=1.1e-13  Score=108.26  Aligned_cols=125  Identities=10%  Similarity=0.008  Sum_probs=95.6

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      +.++.++.+|++|++++.++++..    ++|+|||+||....... ..+++++...+++|+.++.++++++.+.    +.
T Consensus        76 ~~~v~~~~~Dl~d~~~~~~~~~~~----~~D~Vih~A~~~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~  146 (404)
T 1i24_A           76 GKSIELYVGDICDFEFLAESFKSF----EPDSVVHFGEQRSAPYS-MIDRSRAVYTQHNNVIGTLNVLFAIKEF----GE  146 (404)
T ss_dssp             CCCCEEEESCTTSHHHHHHHHHHH----CCSEEEECCSCCCHHHH-TSCHHHHHHHHHHHHHHHHHHHHHHHHH----CT
T ss_pred             CCceEEEECCCCCHHHHHHHHhcc----CCCEEEECCCCCCccch-hhCccchhhhHHHHHHHHHHHHHHHHHh----CC
Confidence            346889999999999999988875    58999999997543211 2256778889999999999999998653    33


Q ss_pred             -CeEEEEecccccc------------------------ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         104 -GHIVCISSIAALT------------------------AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       104 -~~ii~iss~~~~~------------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                       .+||++||.+.+.                        +..+...|+.+|++.+.+++.++.+++   .++.+..|+...
T Consensus       147 ~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g---i~~~ivrp~~v~  223 (404)
T 1i24_A          147 ECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG---IRATDLNQGVVY  223 (404)
T ss_dssp             TCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECEEE
T ss_pred             CcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC---CeEEEEecceee
Confidence             4999999976542                        223457899999999999999988863   466666676554


Q ss_pred             cc
Q psy5462         159 TI  160 (182)
Q Consensus       159 ~~  160 (182)
                      .+
T Consensus       224 Gp  225 (404)
T 1i24_A          224 GV  225 (404)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.50  E-value=3.1e-13  Score=100.34  Aligned_cols=133  Identities=14%  Similarity=-0.007  Sum_probs=101.3

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|..+.+.... ...++.++.+|++|++++.++++      ++|+||||||...        .++++..+++
T Consensus        20 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vi~~a~~~~--------~~~~~~~~~~   85 (267)
T 3ay3_A           20 PHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVK------DCDGIIHLGGVSV--------ERPWNDILQA   85 (267)
T ss_dssp             GGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHT------TCSEEEECCSCCS--------CCCHHHHHHH
T ss_pred             HHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHc------CCCEEEECCcCCC--------CCCHHHHHHH
Confidence            5677889988888765432 22457889999999998887765      4899999999752        2235778999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC------------CCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV------------NVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~------------~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      |+.++.++++++.+    .+.++||++||...+.+.+            +...|+.+|++.+.+++.++.+.   ..++.
T Consensus        86 n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~  158 (267)
T 3ay3_A           86 NIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKF---DIETL  158 (267)
T ss_dssp             THHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTT---CCCEE
T ss_pred             HHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEE
Confidence            99999999998864    3457999999987653322            35799999999999999987653   34667


Q ss_pred             eeCCCcc
Q psy5462         151 VTTPLRS  157 (182)
Q Consensus       151 v~~~~~~  157 (182)
                      +..|++.
T Consensus       159 ~lrp~~v  165 (267)
T 3ay3_A          159 NIRIGSC  165 (267)
T ss_dssp             EEEECBC
T ss_pred             EEeceee
Confidence            7777664

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.48  E-value=2.6e-13  Score=102.79  Aligned_cols=142  Identities=12%  Similarity=0.045  Sum_probs=103.8

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++....    ...++.++.+|++|++++.++++..    ++|++||+|+.....    .+.+++...
T Consensus        18 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~vi~~a~~~~~~----~~~~~~~~~   89 (311)
T 2p5y_A           18 EDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREF----RPTHVSHQAAQASVK----VSVEDPVLD   89 (311)
T ss_dssp             HHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHH----CCSEEEECCSCCCHH----HHHHCHHHH
T ss_pred             HHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhc----CCCEEEECccccCch----hhhhCHHHH
Confidence            4577889988887653211    1235778999999999999888763    589999999864321    245667889


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-------------cCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-------------AVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      +++|+.++.++++++..    .+.++||++||..+.++             ..+...|+.+|++.+.+++.++.+.+   
T Consensus        90 ~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---  162 (311)
T 2p5y_A           90 FEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYG---  162 (311)
T ss_dssp             HHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHcC---
Confidence            99999999999998853    34579999999722221             12457899999999999999998864   


Q ss_pred             cceeeeCCCccccc
Q psy5462         147 WGTTVTTPLRSVTI  160 (182)
Q Consensus       147 ~~i~v~~~~~~~~~  160 (182)
                      .++.+..|+....+
T Consensus       163 ~~~~~lrp~~v~Gp  176 (311)
T 2p5y_A          163 LKWVSLRYGNVYGP  176 (311)
T ss_dssp             CCEEEEEECEEECT
T ss_pred             CCEEEEeeccccCc
Confidence            35566666654443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.46  E-value=6e-13  Score=103.51  Aligned_cols=132  Identities=13%  Similarity=0.042  Sum_probs=102.0

Q ss_pred             cccccccccceeccCCCCC--------C-------Cc-eeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT--------K-------TH-VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~--------~-------~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|..+.+....        .       +. ++.++.+|++|++++.++++.+    ++|+|||+||..... 
T Consensus        46 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~A~~~~~~-  120 (381)
T 1n7h_A           46 EFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI----KPDEVYNLAAQSHVA-  120 (381)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHH-
T ss_pred             HHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc----CCCEEEECCcccCcc-
Confidence            4566778888877644321        1       12 7889999999999999998876    589999999975321 


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEecccccc----------ccCCCchhhhhHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALT----------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~----------~~~~~~~y~~sKaa~~~~~~  136 (182)
                         .+.++++..+++|+.++.++++++.+...++ +.++||++||...+.          +..+...|+.+|++.+.+++
T Consensus       121 ---~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~  197 (381)
T 1n7h_A          121 ---VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTV  197 (381)
T ss_dssp             ---HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ---ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHH
Confidence               2356688899999999999999999876542 246999999987543          23456799999999999999


Q ss_pred             HHHhhhC
Q psy5462         137 SIKCFSG  143 (182)
Q Consensus       137 ~la~e~~  143 (182)
                      .++.+++
T Consensus       198 ~~~~~~~  204 (381)
T 1n7h_A          198 NYREAYG  204 (381)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9998865

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.46  E-value=1.9e-12  Score=99.32  Aligned_cols=122  Identities=11%  Similarity=0.041  Sum_probs=90.8

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTG  104 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  104 (182)
                      .++.++.+|++|++++.++++..    ++|+|||+|+......    ..+++...+++|+.++.++++++..    .+.+
T Consensus        75 ~~~~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~A~~~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~  142 (346)
T 4egb_A           75 PNYYFVKGEIQNGELLEHVIKER----DVQVIVNFAAESHVDR----SIENPIPFYDTNVIGTVTLLELVKK----YPHI  142 (346)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHH----TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHHHH----STTS
T ss_pred             CCeEEEEcCCCCHHHHHHHHhhc----CCCEEEECCcccchhh----hhhCHHHHHHHHHHHHHHHHHHHHh----cCCC
Confidence            57899999999999999998874    5899999999865432    4566778899999999999998854    3457


Q ss_pred             eEEEEecccccccc------------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         105 HIVCISSIAALTAA------------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       105 ~ii~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +||++||...+.+.            .+...|+.+|.+.+.+++.++.+.+   .++.+..|++...+.
T Consensus       143 ~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g---~~~~ilRp~~v~G~~  208 (346)
T 4egb_A          143 KLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQ---LPVIVTRCSNNYGPY  208 (346)
T ss_dssp             EEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CCEEEEEECEEESTT
T ss_pred             EEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC---CCEEEEeecceeCcC
Confidence            89999997654332            1247899999999999999998854   356666666554433

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.45  E-value=6.4e-13  Score=102.01  Aligned_cols=138  Identities=14%  Similarity=0.100  Sum_probs=101.1

Q ss_pred             cccccccccceeccCCCCC-----------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~   66 (182)
                      ++|.++|+.|..+++....                 .+.++.++.+|++|++++.++++..    ++|+|||+||.....
T Consensus        20 ~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~~d~vih~A~~~~~~   95 (348)
T 1ek6_A           20 LELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY----SFMAVIHFAGLKAVG   95 (348)
T ss_dssp             HHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC----CEEEEEECCSCCCHH
T ss_pred             HHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc----CCCEEEECCCCcCcc
Confidence            4567788888887653321                 1346889999999999998887752    589999999975422


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------cCCCchhhhhHHHHHHH
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------AVNVSAYFASKYGVTEN  134 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~  134 (182)
                      .    +.+++...+++|+.++.++++++.    +.+.++||++||...+..            .+....|+.+|++.+.+
T Consensus        96 ~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~  167 (348)
T 1ek6_A           96 E----SVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (348)
T ss_dssp             H----HHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             c----hhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHH
Confidence            1    345677899999999999998764    345579999999776421            12267999999999999


Q ss_pred             HHHHHhhhCCCccceeeeCCC
Q psy5462         135 HPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       135 ~~~la~e~~~~~~~i~v~~~~  155 (182)
                      ++.++.+ +. ..++.+..|.
T Consensus       168 ~~~~~~~-~~-~~~~~~lR~~  186 (348)
T 1ek6_A          168 IRDLCQA-DK-TWNAVLLRYF  186 (348)
T ss_dssp             HHHHHHH-CT-TCEEEEEEEC
T ss_pred             HHHHHhc-CC-CcceEEEeec
Confidence            9999987 31 2344444444

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.45  E-value=1.3e-13  Score=106.17  Aligned_cols=140  Identities=17%  Similarity=0.140  Sum_probs=105.6

Q ss_pred             cccccc-cc-cceeccCCCCC--------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGH-IH-GILFIPWCLPT--------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~-g~-~v~~~~~~~~~--------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|+++ |+ .|..+.+....        ...++.++.+|++|.+++.++++      ++|+|||+||.....    ...
T Consensus        39 ~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~------~~D~Vih~Aa~~~~~----~~~  108 (344)
T 2gn4_A           39 RKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE------GVDICIHAAALKHVP----IAE  108 (344)
T ss_dssp             HHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT------TCSEEEECCCCCCHH----HHH
T ss_pred             HHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh------cCCEEEECCCCCCCC----chh
Confidence            345666 76 67666543210        13578899999999998877654      589999999975421    122


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ......+++|+.++.++++++.+.    +.++||++||..+..|   ...|+.+|++.+.++++++.+++....++.+..
T Consensus       109 ~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vR  181 (344)
T 2gn4_A          109 YNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAANP---INLYGATKLCSDKLFVSANNFKGSSQTQFSVVR  181 (344)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSSC---CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEEC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCC---ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence            345678999999999999999763    4579999999876543   578999999999999999998776666788888


Q ss_pred             CCccccc
Q psy5462         154 PLRSVTI  160 (182)
Q Consensus       154 ~~~~~~~  160 (182)
                      |++...+
T Consensus       182 pg~v~g~  188 (344)
T 2gn4_A          182 YGNVVGS  188 (344)
T ss_dssp             CCEETTC
T ss_pred             eccEECC
Confidence            8876654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.45  E-value=7.7e-14  Score=102.01  Aligned_cols=133  Identities=14%  Similarity=-0.050  Sum_probs=98.1

Q ss_pred             cccccccc--cceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIH--GILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~--~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+  .|..+.+.....    ..++.++.+|++|++++.++++      ++|++|||||....       ...++
T Consensus        36 ~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~ag~~~~-------~~~~~  102 (242)
T 2bka_A           36 KEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ------GHDVGFCCLGTTRG-------KAGAE  102 (242)
T ss_dssp             HHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS------SCSEEEECCCCCHH-------HHHHH
T ss_pred             HHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc------CCCEEEECCCcccc-------cCCcc
Confidence            45677888  888776554322    2468899999999887766543      58999999996422       23567


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.++.++++++.    +.+.++||++||..++.  ++...|+.+|++++.+++.++.+      .+++..|++.
T Consensus       103 ~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e~~~~~~~~~------~~~~vrpg~v  170 (242)
T 2bka_A          103 GFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEELKFD------RYSVFRPGVL  170 (242)
T ss_dssp             HHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTTCCS------EEEEEECCEE
T ss_pred             cceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCC--CCcchHHHHHHHHHHHHHhcCCC------CeEEEcCcee
Confidence            889999999999988764    34568999999988764  34578999999999998865432      4666677766


Q ss_pred             cccc
Q psy5462         158 VTIL  161 (182)
Q Consensus       158 ~~~~  161 (182)
                      .++.
T Consensus       171 ~~~~  174 (242)
T 2bka_A          171 LCDR  174 (242)
T ss_dssp             ECTT
T ss_pred             cCCC
Confidence            5553

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.45  E-value=8.3e-13  Score=101.03  Aligned_cols=127  Identities=15%  Similarity=0.188  Sum_probs=94.6

Q ss_pred             cccccccccceeccCCCCCC-----------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..++......           +.++.++.+|++|++++.++++..    ++|+|||+||......    .
T Consensus        18 ~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~D~vih~A~~~~~~~----~   89 (338)
T 1udb_A           18 VQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH----AIDTVIHFAGLKAVGE----S   89 (338)
T ss_dssp             HHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT----TCSEEEECCSCCCHHH----H
T ss_pred             HHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc----CCCEEEECCccCcccc----c
Confidence            45677899888775322111           346788999999999998887752    5999999999753221    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------cc-CCCchhhhhHHHHHHHHHHHHh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AA-VNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~-~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .+++...+++|+.++.++++++..    .+.++||++||...+.           +. ++...|+.+|++.+.+++.++.
T Consensus        90 ~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~  165 (338)
T 1udb_A           90 VQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK  165 (338)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             hhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            344567899999999999987643    3457999999976542           11 2367999999999999999998


Q ss_pred             hh
Q psy5462         141 FS  142 (182)
Q Consensus       141 e~  142 (182)
                      +.
T Consensus       166 ~~  167 (338)
T 1udb_A          166 AQ  167 (338)
T ss_dssp             HS
T ss_pred             hc
Confidence            84

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.45  E-value=1.2e-12  Score=99.87  Aligned_cols=128  Identities=9%  Similarity=-0.107  Sum_probs=97.9

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|..+.+....          .+.++.++.+|++|++++.++++.+    ++|+|||+||.....    .+.
T Consensus        32 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~Vih~A~~~~~~----~~~  103 (335)
T 1rpn_A           32 KLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA----QPQEVYNLAAQSFVG----ASW  103 (335)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHH----HHT
T ss_pred             HHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc----CCCEEEECccccchh----hhh
Confidence            4567788888888765432          2357889999999999999998876    589999999964321    112


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +++...+++|+.++.++++++.+.    + .++||++||...+.+.           .+...|+.+|++.+.+++.++.+
T Consensus       104 ~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~  179 (335)
T 1rpn_A          104 NQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES  179 (335)
T ss_dssp             TSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            346788999999999999998653    3 3799999997654321           12468999999999999999988


Q ss_pred             hC
Q psy5462         142 SG  143 (182)
Q Consensus       142 ~~  143 (182)
                      ++
T Consensus       180 ~~  181 (335)
T 1rpn_A          180 FG  181 (335)
T ss_dssp             HC
T ss_pred             cC
Confidence            65

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.44  E-value=7e-13  Score=101.61  Aligned_cols=130  Identities=18%  Similarity=0.112  Sum_probs=98.4

Q ss_pred             ccccccc-------ccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHI-------HGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g-------~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|       +.|..+++....    .+.++.++.+|++|++++.++++     +++|+|||+||....     .+
T Consensus        32 ~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~~d~vih~A~~~~~-----~~  101 (342)
T 2hrz_A           32 QRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE-----ARPDVIFHLAAIVSG-----EA  101 (342)
T ss_dssp             HHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH-----TCCSEEEECCCCCHH-----HH
T ss_pred             HHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh-----cCCCEEEECCccCcc-----cc
Confidence            3456667       677776654321    34678899999999999888775     369999999997531     23


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEecccccccc-C----------CCchhhhhHHHHHHHHHHHHh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAA-V----------NVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~-~----------~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .++++..+++|+.++.++++++.+...+. +.++||++||.+.+.+. +          +...|+.+|++.+.+++.++.
T Consensus       102 ~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~  181 (342)
T 2hrz_A          102 ELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSR  181 (342)
T ss_dssp             HHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            56788899999999999999987753222 14799999998765432 1          567999999999999999988


Q ss_pred             hhC
Q psy5462         141 FSG  143 (182)
Q Consensus       141 e~~  143 (182)
                      +..
T Consensus       182 ~~~  184 (342)
T 2hrz_A          182 RGF  184 (342)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            743

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.44  E-value=7.5e-13  Score=101.91  Aligned_cols=141  Identities=9%  Similarity=0.019  Sum_probs=105.7

Q ss_pred             cccccccccceeccCCCCCC---------------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---------------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---------------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+++.....               +.++.++.+|++|.+++.++++      ++|+|||+||.....  
T Consensus        45 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~A~~~~~~--  116 (352)
T 1sb8_A           45 ETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA------GVDYVLHQAALGSVP--  116 (352)
T ss_dssp             HHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT------TCSEEEECCSCCCHH--
T ss_pred             HHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc------CCCEEEECCcccCch--
Confidence            45667788888877543211               2578899999999998887765      489999999975321  


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-----------CCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-----------NVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~  137 (182)
                        .+.++++..+++|+.++.++++++.+    .+.++||++||...+.+.+           +...|+.+|++.+.+++.
T Consensus       117 --~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~  190 (352)
T 1sb8_A          117 --RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  190 (352)
T ss_dssp             --HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             --hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence              13466788999999999999999865    3457999999987654332           357999999999999999


Q ss_pred             HHhhhCCCccceeeeCCCcccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      ++.+.+   .++.+..|++...+.
T Consensus       191 ~~~~~g---~~~~ilRp~~v~G~~  211 (352)
T 1sb8_A          191 FSRCYG---FSTIGLRYFNVFGRR  211 (352)
T ss_dssp             HHHHHC---CCCEEEEECCEECTT
T ss_pred             HHHHcC---CCEEEEEECceeCcC
Confidence            998864   356666666554443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.43  E-value=4.1e-13  Score=103.54  Aligned_cols=142  Identities=11%  Similarity=-0.070  Sum_probs=105.0

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC-------------C---------------------c
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS-------------S---------------------V   68 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~-------------~---------------------~   68 (182)
                      |.++..+.||++|+++++++++.+.+ +|+||+||||++.....             +                     +
T Consensus       111 G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l  190 (401)
T 4ggo_A          111 GLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISA  190 (401)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEE
T ss_pred             CCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccc
Confidence            66889999999999999999999999 99999999999875310             0                     1


Q ss_pred             ccCCHHHHHHHHHHH---hHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--ccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          69 LAHTDHEIERIMDVN---LMSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n---~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      ...+.++++....++   .+..+...+...+.|.+  ++++|.+|+..+..  |..+.+.+|.+|++++..++.|+.+++
T Consensus       191 ~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~  268 (401)
T 4ggo_A          191 EPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP  268 (401)
T ss_dssp             CCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC
Confidence            123556666655554   44555566666665543  58999999977644  333456899999999999999999998


Q ss_pred             CCccceeeeCCCcccccccccchhhH
Q psy5462         144 YMLWGTTVTTPLRSVTILYQRSVLTI  169 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~~~~~~  169 (182)
                      +  ..++|+.+....|.-....+..|
T Consensus       269 ~--~~a~v~v~~a~vT~AssaIP~~p  292 (401)
T 4ggo_A          269 S--IRAFVSVNKGLVTRASAVIPVIP  292 (401)
T ss_dssp             T--EEEEEEECCCCCCTTGGGSSSHH
T ss_pred             C--CcEEEEEcCccccchhhcCCCch
Confidence            4  46777777776666665554444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.43  E-value=1.5e-12  Score=99.16  Aligned_cols=140  Identities=9%  Similarity=0.063  Sum_probs=103.5

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+....    ...++.++.+|++|++++.++++.    .++|+|||+|+......    +.++++..
T Consensus        19 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~d~vih~a~~~~~~~----~~~~~~~~   90 (330)
T 2c20_A           19 KKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ----ENIEAVMHFAADSLVGV----SMEKPLQY   90 (330)
T ss_dssp             HHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH----SCEEEEEECCCCCCHHH----HHHSHHHH
T ss_pred             HHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh----cCCCEEEECCcccCccc----cccCHHHH
Confidence            4567778888887643321    123688999999999999888775    36999999999753221    34567889


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      +++|+.++.++++++..    .+.++||++||...+..           ..+...|+.+|.+.+.+++.++.+.+   .+
T Consensus        91 ~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~~  163 (330)
T 2c20_A           91 YNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASN---LR  163 (330)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTSS---CE
T ss_pred             HHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHhC---Cc
Confidence            99999999999998743    34579999999775432           12457999999999999999998753   35


Q ss_pred             eeeeCCCccc
Q psy5462         149 TTVTTPLRSV  158 (182)
Q Consensus       149 i~v~~~~~~~  158 (182)
                      +.+..|++..
T Consensus       164 ~~ilrp~~v~  173 (330)
T 2c20_A          164 YKIFRYFNVA  173 (330)
T ss_dssp             EEEEECSEEE
T ss_pred             EEEEecCccc
Confidence            6666665433

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.43  E-value=9.2e-14  Score=101.37  Aligned_cols=130  Identities=14%  Similarity=0.134  Sum_probs=97.2

Q ss_pred             cccccccccceeccCCCCCC----Ccee-EEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVA-VYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~-~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+.+.....    ..++ .++.+|++         +.+.+ ++++|+||||||....        ++++
T Consensus        39 ~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~---------~~~~~~~~~~D~vi~~ag~~~~--------~~~~  101 (236)
T 3e8x_A           39 SELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE---------EDFSHAFASIDAVVFAAGSGPH--------TGAD  101 (236)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT---------SCCGGGGTTCSEEEECCCCCTT--------SCHH
T ss_pred             HHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH---------HHHHHHHcCCCEEEECCCCCCC--------CCcc
Confidence            45777899888887654321    1257 89999999         34455 6789999999997532        3477


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      ..+++|+.++.++++++..    .+.++||++||..+..+.   ++...|+.+|++.+.+++    +   ...++++..|
T Consensus       102 ~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~----~---~gi~~~~lrp  170 (236)
T 3e8x_A          102 KTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK----R---SSLDYTIVRP  170 (236)
T ss_dssp             HHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH----H---SSSEEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH----H---CCCCEEEEeC
Confidence            8899999999999999843    356899999997766554   467899999999999877    2   2456677777


Q ss_pred             Ccccccc
Q psy5462         155 LRSVTIL  161 (182)
Q Consensus       155 ~~~~~~~  161 (182)
                      ++..+..
T Consensus       171 g~v~~~~  177 (236)
T 3e8x_A          171 GPLSNEE  177 (236)
T ss_dssp             CSEECSC
T ss_pred             CcccCCC
Confidence            7665543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.42  E-value=1.1e-12  Score=100.34  Aligned_cols=138  Identities=14%  Similarity=0.074  Sum_probs=97.6

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+.....    ..++.++.+|++|++++.++++      ++|+|||+|+...      ...++++..
T Consensus        31 ~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~a~~~~------~~~~~~~~~   98 (342)
T 2x4g_A           31 RAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR------GLDGVIFSAGYYP------SRPRRWQEE   98 (342)
T ss_dssp             HHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT------TCSEEEEC------------------CH
T ss_pred             HHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc------CCCEEEECCccCc------CCCCCHHHH
Confidence            45677888888887654321    1268899999999998877664      4899999999643      134567788


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC----------------CchhhhhHHHHHHHHHHHHhhhC
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN----------------VSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~----------------~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +++|+.++.++++++.+.    +.++||++||...+.+.+.                ...|+.+|.+.+.+++.++.+  
T Consensus        99 ~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--  172 (342)
T 2x4g_A           99 VASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARN--  172 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhhc--
Confidence            999999999999999763    4579999999887644333                679999999999999999874  


Q ss_pred             CCccceeeeCCCcccccc
Q psy5462         144 YMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~  161 (182)
                        ..++.+..|++...+.
T Consensus       173 --g~~~~ilrp~~v~g~~  188 (342)
T 2x4g_A          173 --GLPVVIGIPGMVLGEL  188 (342)
T ss_dssp             --TCCEEEEEECEEECSC
T ss_pred             --CCcEEEEeCCceECCC
Confidence              3466777777655443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.41  E-value=2.2e-12  Score=98.64  Aligned_cols=120  Identities=14%  Similarity=0.101  Sum_probs=91.6

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCC
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTG  104 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  104 (182)
                      .++.++.+|++|++++.+++      +++|+|||+||.....    .+.++++..+++|+.++.++++++.+.    +.+
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~------~~~d~Vih~A~~~~~~----~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~  120 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLAREL------RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCAVDA----GVG  120 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHT------TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCC
T ss_pred             CCeEEEEcCCCCHHHHHHHh------cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCC
Confidence            57889999999998887765      4689999999975321    134556788999999999999998764    347


Q ss_pred             eEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         105 HIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       105 ~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +||++||.+.+.           +..+...|+.+|++.+.+++.++.+.+   .++.+..|++...+.
T Consensus       121 ~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g---~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG---LDVRITRCCNNYGPY  185 (337)
T ss_dssp             EEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CCEEEEEECEEECTT
T ss_pred             EEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHC---CCEEEEEeeeeECCC
Confidence            999999976542           223567999999999999999998864   356666666544443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.41  E-value=1.9e-12  Score=99.39  Aligned_cols=139  Identities=9%  Similarity=0.011  Sum_probs=101.8

Q ss_pred             ccccc--cccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           5 RTTGH--IHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         5 ~l~~~--g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      +|.++  |+.|..+++....         .+.++.++.+|++|++++.++++.      +|+|||+||....    +.+.
T Consensus        23 ~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~d~vih~A~~~~~----~~~~   92 (348)
T 1oc2_A           23 YVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK------ADAIVHYAAESHN----DNSL   92 (348)
T ss_dssp             HHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT------CSEEEECCSCCCH----HHHH
T ss_pred             HHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhc------CCEEEECCcccCc----cchh
Confidence            45566  7777777643211         125788999999999988877653      6999999997532    1234


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------------------ccCCCchhhhhHHH
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------------------AAVNVSAYFASKYG  130 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------------------~~~~~~~y~~sKaa  130 (182)
                      ++++..+++|+.++.++++++.+.    + ++||++||...+.                       +..+...|+.+|++
T Consensus        93 ~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~  167 (348)
T 1oc2_A           93 NDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAA  167 (348)
T ss_dssp             HCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHH
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHH
Confidence            567788999999999999999764    3 4999999976431                       22346799999999


Q ss_pred             HHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         131 VTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       131 ~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      .+.+++.++.+++   .++.+..|+....+.
T Consensus       168 ~e~~~~~~~~~~g---i~~~ilrp~~v~G~~  195 (348)
T 1oc2_A          168 SDLIVKAWVRSFG---VKATISNCSNNYGPY  195 (348)
T ss_dssp             HHHHHHHHHHHHC---CEEEEEEECCEESTT
T ss_pred             HHHHHHHHHHHhC---CCEEEEeeceeeCCC
Confidence            9999999998864   366666666555444

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.40  E-value=4.6e-12  Score=96.88  Aligned_cols=121  Identities=14%  Similarity=0.106  Sum_probs=91.9

Q ss_pred             cccccccccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|..+++.....      -.++.++.+|++|++++.++++..    ++|+|||+||.....     +.++++
T Consensus        39 ~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~D~vih~A~~~~~~-----~~~~~~  109 (333)
T 2q1w_A           39 ELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL----QPDAVVHTAASYKDP-----DDWYND  109 (333)
T ss_dssp             HHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH----CCSEEEECCCCCSCT-----TCHHHH
T ss_pred             HHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc----CCcEEEECceecCCC-----ccCChH
Confidence            45677888888876543211      146889999999999999888763    689999999976432     234444


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc----cc--------CCC-chhhhhHHHHHHHHHH-HH
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT----AA--------VNV-SAYFASKYGVTENHPS-IK  139 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~----~~--------~~~-~~y~~sKaa~~~~~~~-la  139 (182)
                        +++|+.++.++++++.+    .+.++||++||...+.    ..        .+. ..|+.+|++.+.+++. ++
T Consensus       110 --~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~  179 (333)
T 2q1w_A          110 --TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL  179 (333)
T ss_dssp             --HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC
Confidence              89999999999999865    3457999999977653    21        234 7999999999999988 66

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.40  E-value=2.7e-12  Score=98.64  Aligned_cols=140  Identities=9%  Similarity=0.042  Sum_probs=104.8

Q ss_pred             cccccccccceeccCCCCCCC---------------ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT---------------HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~---------------~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+.+......               .++.++.+|++|++++.++++      ++|+|||+|+.....  
T Consensus        43 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~Vih~A~~~~~~--  114 (351)
T 3ruf_A           43 EKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK------GVDHVLHQAALGSVP--  114 (351)
T ss_dssp             HHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT------TCSEEEECCCCCCHH--
T ss_pred             HHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc------CCCEEEECCccCCcc--
Confidence            457778999888876543221               578999999999998887765      489999999974321  


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~  137 (182)
                        .+.+++...+++|+.++.++++++..    .+.+++|++||...+...           .+...|+.+|.+.+.+++.
T Consensus       115 --~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  188 (351)
T 3ruf_A          115 --RSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQV  188 (351)
T ss_dssp             --HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             --hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHH
Confidence              23456778899999999999998854    345699999998765322           2357899999999999999


Q ss_pred             HHhhhCCCccceeeeCCCccccc
Q psy5462         138 IKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++.+.+   .++.+..|.....+
T Consensus       189 ~~~~~g---~~~~ilRp~~v~G~  208 (351)
T 3ruf_A          189 YARTYG---FKTIGLRYFNVFGR  208 (351)
T ss_dssp             HHHHHC---CCCEEEEECSEEST
T ss_pred             HHHHhC---CCEEEEeeCceeCc
Confidence            998864   35566666554443

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.38  E-value=2.7e-12  Score=99.88  Aligned_cols=141  Identities=16%  Similarity=0.062  Sum_probs=103.7

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+.....    ..++.++.+|++|++++.++++      ++|+|||+|+......+   ..++++..
T Consensus        47 ~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~Vih~A~~~~~~~~---~~~~~~~~  117 (379)
T 2c5a_A           47 RRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE------GVDHVFNLAADMGGMGF---IQSNHSVI  117 (379)
T ss_dssp             HHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT------TCSEEEECCCCCCCHHH---HTTCHHHH
T ss_pred             HHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC------CCCEEEECceecCcccc---cccCHHHH
Confidence            45677888888887554322    2468899999999998887764      48999999997532111   12346788


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc------------------ccCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT------------------AAVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~------------------~~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +++|+.++.++++++..    .+.++||++||...+.                  +..+...|+.+|.+.+.+++.++.+
T Consensus       118 ~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  193 (379)
T 2c5a_A          118 MYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD  193 (379)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            99999999999999854    3457999999976543                  2234578999999999999999887


Q ss_pred             hCCCccceeeeCCCccccc
Q psy5462         142 SGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       142 ~~~~~~~i~v~~~~~~~~~  160 (182)
                      .+   .++.+..|++...+
T Consensus       194 ~g---i~~~ilrp~~v~G~  209 (379)
T 2c5a_A          194 FG---IECRIGRFHNIYGP  209 (379)
T ss_dssp             HC---CEEEEEEECCEECT
T ss_pred             HC---CCEEEEEeCceeCc
Confidence            53   36666666655444

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.38  E-value=7e-13  Score=95.63  Aligned_cols=129  Identities=16%  Similarity=0.085  Sum_probs=97.9

Q ss_pred             cccccccccceeccCCCCCCC--ceeEEEEccCCC-HHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT--HVAVYFKADVSD-KAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~D~s~-~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+.+......  .++.++.+|++| ++++.++++      ++|+||||||.....            .+
T Consensus        18 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~------~~d~vi~~ag~~~~~------------~~   79 (219)
T 3dqp_A           18 KSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH------GMDAIINVSGSGGKS------------LL   79 (219)
T ss_dssp             HHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTT------TCSEEEECCCCTTSS------------CC
T ss_pred             HHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHc------CCCEEEECCcCCCCC------------cE
Confidence            467788999888875543222  679999999999 887776654      589999999986522            56


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC-------CchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN-------VSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~-------~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      ++|+.++.++++++.    +.+.++||++||..+..+.+.       ...|+.+|++.+.+++   .   ....++.+..
T Consensus        80 ~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~---~---~~~i~~~ilr  149 (219)
T 3dqp_A           80 KVDLYGAVKLMQAAE----KAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT---K---ETNLDYTIIQ  149 (219)
T ss_dssp             CCCCHHHHHHHHHHH----HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH---H---SCCCEEEEEE
T ss_pred             eEeHHHHHHHHHHHH----HhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH---h---ccCCcEEEEe
Confidence            788999999988874    345579999999888766655       7899999999999886   1   2345677777


Q ss_pred             CCccccc
Q psy5462         154 PLRSVTI  160 (182)
Q Consensus       154 ~~~~~~~  160 (182)
                      |++....
T Consensus       150 p~~v~g~  156 (219)
T 3dqp_A          150 PGALTEE  156 (219)
T ss_dssp             ECSEECS
T ss_pred             CceEecC
Confidence            7765544

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.38  E-value=4.1e-12  Score=96.23  Aligned_cols=140  Identities=14%  Similarity=0.047  Sum_probs=99.8

Q ss_pred             cccccccccceeccCCC---CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCL---PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.+.......   ......+.++.+|++| +++.++++      ++|++||+|+....    ..+.++++..+
T Consensus        19 ~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~------~~d~vih~a~~~~~----~~~~~~~~~~~   87 (313)
T 3ehe_A           19 DKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK------GAEEVWHIAANPDV----RIGAENPDEIY   87 (313)
T ss_dssp             HHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT------TCSEEEECCCCCCC----C-CCCCHHHHH
T ss_pred             HHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc------CCCEEEECCCCCCh----hhhhhCHHHHH
Confidence            45677774333322111   1124578899999999 77776654      58999999986432    23455678899


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      ++|+.++.++++++..    .+.++||++||...+.           +..+...|+.+|.+.+.+++.++.+++   .++
T Consensus        88 ~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g---~~~  160 (313)
T 3ehe_A           88 RNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFD---MQA  160 (313)
T ss_dssp             HHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CEE
T ss_pred             HHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CCE
Confidence            9999999999998643    3557999999987652           334567899999999999999999864   366


Q ss_pred             eeeCCCcccccc
Q psy5462         150 TVTTPLRSVTIL  161 (182)
Q Consensus       150 ~v~~~~~~~~~~  161 (182)
                      .+..|.....+.
T Consensus       161 ~ilRp~~v~G~~  172 (313)
T 3ehe_A          161 WIYRFANVIGRR  172 (313)
T ss_dssp             EEEECSCEESTT
T ss_pred             EEEeeccccCcC
Confidence            667776655443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.37  E-value=5.4e-12  Score=96.82  Aligned_cols=134  Identities=10%  Similarity=-0.037  Sum_probs=104.0

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+....  .++.++.+|++|.+++.++++      ++|+|||+|+....      +..+++..+++|
T Consensus        37 ~~L~~~G~~V~~~~r~~~~--~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~A~~~~~------~~~~~~~~~~~n  102 (347)
T 4id9_A           37 AALRTQGRTVRGFDLRPSG--TGGEEVVGSLEDGQALSDAIM------GVSAVLHLGAFMSW------APADRDRMFAVN  102 (347)
T ss_dssp             HHHHHTTCCEEEEESSCCS--SCCSEEESCTTCHHHHHHHHT------TCSEEEECCCCCCS------SGGGHHHHHHHH
T ss_pred             HHHHhCCCEEEEEeCCCCC--CCccEEecCcCCHHHHHHHHh------CCCEEEECCcccCc------chhhHHHHHHHH
Confidence            4577889999888766533  678899999999999887765      48999999987543      233458899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-------------cCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++.++++++..    .+.++||++||...+..             ..+...|+.+|.+.+.+++.++.+.   ..++.
T Consensus       103 v~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~  175 (347)
T 4id9_A          103 VEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETV  175 (347)
T ss_dssp             THHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEE
T ss_pred             HHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceE
Confidence            9999999999854    44579999999664422             2356789999999999999998884   34667


Q ss_pred             eeCCCccc
Q psy5462         151 VTTPLRSV  158 (182)
Q Consensus       151 v~~~~~~~  158 (182)
                      +..|.+..
T Consensus       176 ilRp~~v~  183 (347)
T 4id9_A          176 ILRFSHTQ  183 (347)
T ss_dssp             EEEECEEE
T ss_pred             EEccceEe
Confidence            77776554

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.37  E-value=2.1e-12  Score=93.45  Aligned_cols=133  Identities=11%  Similarity=-0.019  Sum_probs=98.1

Q ss_pred             cccccccccceeccCCCCC---CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+.+....   ...++.++.+|++|++++.++++      ++|+|||+||.....          ...+
T Consensus        22 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vi~~a~~~~~~----------~~~~   85 (227)
T 3dhn_A           22 NEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK------GADAVISAFNPGWNN----------PDIY   85 (227)
T ss_dssp             HHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT------TCSEEEECCCC----------------CC
T ss_pred             HHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc------CCCEEEEeCcCCCCC----------hhHH
Confidence            4577889988888755432   23789999999999999888775      489999999864211          1257


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC----------CCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV----------NVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~----------~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      ++|+.++.++++++..    .+.++||++||...+.+.+          +...|+.+|++.+.+.+.++.+.   ..++.
T Consensus        86 ~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~  158 (227)
T 3dhn_A           86 DETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEK---EIDWV  158 (227)
T ss_dssp             SHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCC---SSEEE
T ss_pred             HHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhcc---CccEE
Confidence            7899999999888754    3456999999987654432          36789999999999999988753   34667


Q ss_pred             eeCCCcccc
Q psy5462         151 VTTPLRSVT  159 (182)
Q Consensus       151 v~~~~~~~~  159 (182)
                      +..|++...
T Consensus       159 ilrp~~v~g  167 (227)
T 3dhn_A          159 FFSPAADMR  167 (227)
T ss_dssp             EEECCSEEE
T ss_pred             EEeCCcccC
Confidence            777776443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.36  E-value=1.2e-12  Score=98.94  Aligned_cols=139  Identities=12%  Similarity=-0.024  Sum_probs=102.0

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+++....    ...++.++.+|++|.+ +.+++      .. |+|||+|+....    ..+.+++...
T Consensus        18 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~------~~-d~vih~A~~~~~----~~~~~~~~~~   85 (312)
T 3ko8_A           18 DKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGI------KG-DVVFHFAANPEV----RLSTTEPIVH   85 (312)
T ss_dssp             HHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTC------CC-SEEEECCSSCSS----SGGGSCHHHH
T ss_pred             HHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhc------CC-CEEEECCCCCCc----hhhhhCHHHH
Confidence            4577789998888754332    2457889999999986 44332      33 999999996432    2245567788


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      +++|+.++.++++++..    .+.++||++||...+.           +..+...|+.+|.+.+.+++.++.+++   .+
T Consensus        86 ~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g---~~  158 (312)
T 3ko8_A           86 FNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFG---VR  158 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CE
T ss_pred             HHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC---CC
Confidence            99999999999998854    3457999999987652           223468999999999999999999874   36


Q ss_pred             eeeeCCCcccccc
Q psy5462         149 TTVTTPLRSVTIL  161 (182)
Q Consensus       149 i~v~~~~~~~~~~  161 (182)
                      +.+..|++...+.
T Consensus       159 ~~~lrp~~v~g~~  171 (312)
T 3ko8_A          159 CLAVRYANVVGPR  171 (312)
T ss_dssp             EEEEEECEEECTT
T ss_pred             EEEEeeccccCcC
Confidence            6666676555543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.36  E-value=2.3e-13  Score=104.02  Aligned_cols=141  Identities=10%  Similarity=-0.000  Sum_probs=101.7

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEE-EccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYF-KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~-~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+.+....           .+.++.++ .+|++|++++.++++      ++|+|||+|+.....     
T Consensus        29 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vih~A~~~~~~-----   97 (342)
T 1y1p_A           29 EQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------GAAGVAHIASVVSFS-----   97 (342)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------TCSEEEECCCCCSCC-----
T ss_pred             HHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc------CCCEEEEeCCCCCCC-----
Confidence            4567778888877653211           12567888 899999887766543      589999999976432     


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-cc------------------------------CC
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AA------------------------------VN  120 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~------------------------------~~  120 (182)
                        +++...+++|+.++.++++++.+   ..+.++||++||...+. +.                              .+
T Consensus        98 --~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~  172 (342)
T 1y1p_A           98 --NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS  172 (342)
T ss_dssp             --SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHH
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccc
Confidence              23567899999999999999864   23457999999987652 21                              12


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         121 VSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       121 ~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      ...|+.+|++.+.+++.++.+++. ...+.+..|+...++.
T Consensus       173 ~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~  212 (342)
T 1y1p_A          173 LWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCC
Confidence            368999999999999999999764 3456666676655443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.35  E-value=7.1e-12  Score=96.83  Aligned_cols=122  Identities=14%  Similarity=0.079  Sum_probs=91.1

Q ss_pred             ccccc--ccccceeccCCCC-----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCC
Q psy5462           4 DRTTG--HIHGILFIPWCLP-----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVA   64 (182)
Q Consensus         4 ~~l~~--~g~~v~~~~~~~~-----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~   64 (182)
                      ++|.+  +|+.|..+++...                 ..+.++.++.+|++|++++.++     ...++|+|||+||...
T Consensus        28 ~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-----~~~~~D~vih~A~~~~  102 (362)
T 3sxp_A           28 FHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-----EKLHFDYLFHQAAVSD  102 (362)
T ss_dssp             HHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-----TTSCCSEEEECCCCCG
T ss_pred             HHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-----hccCCCEEEECCccCC
Confidence            34566  7888888765322                 1234678999999999998887     2256999999999643


Q ss_pred             CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----------CCCchhhhhHHHHHHH
Q psy5462          65 SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----------VNVSAYFASKYGVTEN  134 (182)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----------~~~~~y~~sKaa~~~~  134 (182)
                      .      +.++++..+++|+.++.++++++..    . +++||++||...+...          .+...|+.+|.+.+.+
T Consensus       103 ~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~  171 (362)
T 3sxp_A          103 T------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEF  171 (362)
T ss_dssp             G------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred             c------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence            2      3345778899999999999999843    2 3569999996644221          2345699999999999


Q ss_pred             HHHHHhh
Q psy5462         135 HPSIKCF  141 (182)
Q Consensus       135 ~~~la~e  141 (182)
                      ++.++.+
T Consensus       172 ~~~~~~~  178 (362)
T 3sxp_A          172 VLSHSND  178 (362)
T ss_dssp             HHHTTTT
T ss_pred             HHHHhcc
Confidence            9999887

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.34  E-value=2.8e-12  Score=97.14  Aligned_cols=121  Identities=7%  Similarity=0.044  Sum_probs=69.1

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+....  .+  ++.+|++|++++.++++..    ++|+|||+||.....    .+.++++..+++|
T Consensus        20 ~~L~~~g~~V~~~~r~~~~--~~--~~~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~~----~~~~~~~~~~~~n   87 (315)
T 2ydy_A           20 KEFQQNNWHAVGCGFRRAR--PK--FEQVNLLDSNAVHHIIHDF----QPHVIVHCAAERRPD----VVENQPDAASQLN   87 (315)
T ss_dssp             HHHHTTTCEEEEEC----------------------CHHHHHHH----CCSEEEECC-----------------------
T ss_pred             HHHHhCCCeEEEEccCCCC--CC--eEEecCCCHHHHHHHHHhh----CCCEEEECCcccChh----hhhcCHHHHHHHH
Confidence            4567789888888754322  22  7889999999999888765    589999999975432    2456788899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc----------cCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA----------AVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~----------~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +.++.++++++.+.    + ++||++||...+.+          ..+...|+.+|++.+.+++.++.+
T Consensus        88 ~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  150 (315)
T 2ydy_A           88 VDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLG  150 (315)
T ss_dssp             CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCC
Confidence            99999999999753    3 59999999876543          345679999999999999988654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.34  E-value=1.1e-11  Score=93.95  Aligned_cols=126  Identities=13%  Similarity=0.130  Sum_probs=95.2

Q ss_pred             cccccc--cccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGH--IHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++  |+.|..++...... .++.++.+|++|++++.++++..    ++|+|||+|+....     ...++++..++
T Consensus        17 ~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~D~~d~~~~~~~~~~~----~~d~vih~a~~~~~-----~~~~~~~~~~~   86 (317)
T 3ajr_A           17 PYLAEKYGKKNVIASDIVQRDT-GGIKFITLDVSNRDEIDRAVEKY----SIDAIFHLAGILSA-----KGEKDPALAYK   86 (317)
T ss_dssp             HHHHHHHCGGGEEEEESSCCCC-TTCCEEECCTTCHHHHHHHHHHT----TCCEEEECCCCCHH-----HHHHCHHHHHH
T ss_pred             HHHHHhcCCCEEEEecCCCccc-cCceEEEecCCCHHHHHHHHhhc----CCcEEEECCcccCC-----ccccChHHHhh
Confidence            345666  78888776543322 25678999999999999888752    59999999987432     12355778899


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------CCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------VNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +|+.++.++++++.+    .+.+++|++||...+.+.            .+...|+.+|.+.+.+++.++.+.+
T Consensus        87 ~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  156 (317)
T 3ajr_A           87 VNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFG  156 (317)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhcC
Confidence            999999999998854    345799999998765432            1367999999999999999987754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.34  E-value=4.4e-12  Score=98.63  Aligned_cols=141  Identities=12%  Similarity=0.015  Sum_probs=101.6

Q ss_pred             ccccccc-ccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHI-HGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++| +.|..+.+.....      ..++.++.+|++|++++.++++      ++|+|||+|+.....    .+.+++
T Consensus        50 ~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~------~~d~Vih~A~~~~~~----~~~~~~  119 (377)
T 2q1s_A           50 KRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD------EYDYVFHLATYHGNQ----SSIHDP  119 (377)
T ss_dssp             HHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS------CCSEEEECCCCSCHH----HHHHCH
T ss_pred             HHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh------CCCEEEECCCccCch----hhhhCH
Confidence            4566778 8888877543321      4578899999999987766543      689999999975321    134567


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEecccccc----------------cc-CCCchhhhhHHHHHHHHHHH
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALT----------------AA-VNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~----------------~~-~~~~~y~~sKaa~~~~~~~l  138 (182)
                      +..+++|+.++.++++++.    +. +.++||++||...+.                +. .+...|+.+|++.+.+++.+
T Consensus       120 ~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  195 (377)
T 2q1s_A          120 LADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYY  195 (377)
T ss_dssp             HHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHH
Confidence            8899999999999999884    33 456999999976431                22 34578999999999999999


Q ss_pred             HhhhCCCccceeeeCCCcccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +.+.+   .++.+..|+....+.
T Consensus       196 ~~~~g---i~~~ilRp~~v~G~~  215 (377)
T 2q1s_A          196 HKQHQ---LPTVRARFQNVYGPG  215 (377)
T ss_dssp             HHHHC---CCEEEEEECCEECTT
T ss_pred             HHHhC---CCEEEEeeccEECCC
Confidence            88753   466666676554443

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.30  E-value=8.3e-12  Score=94.32  Aligned_cols=138  Identities=12%  Similarity=0.027  Sum_probs=101.0

Q ss_pred             cccccc--cccceeccCCCCCC--CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGH--IHGILFIPWCLPTK--THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~--g~~v~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++  |+.|..+.+.....  ..++.++.+|++|++++.++++..    ++|+|||+|+.....     ..++++..
T Consensus        20 ~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~----~~d~vih~a~~~~~~-----~~~~~~~~   90 (312)
T 2yy7_A           20 QKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVH----KITDIYLMAALLSAT-----AEKNPAFA   90 (312)
T ss_dssp             HHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHT----TCCEEEECCCCCHHH-----HHHCHHHH
T ss_pred             HHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhc----CCCEEEECCccCCCc-----hhhChHHH
Confidence            345666  88888877543321  135678999999999999888763    589999999874321     23557788


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------CCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------VNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +++|+.++.++++++.+    .+.+++|++||...+.+.            .+...|+.+|.+.+.+++.++.+.+   .
T Consensus        91 ~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~---~  163 (312)
T 2yy7_A           91 WDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIYG---V  163 (312)
T ss_dssp             HHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHHC---C
T ss_pred             HHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhcC---C
Confidence            99999999999998853    345699999998765321            2357899999999999999988753   3


Q ss_pred             ceeeeCCCcc
Q psy5462         148 GTTVTTPLRS  157 (182)
Q Consensus       148 ~i~v~~~~~~  157 (182)
                      ++.+..|+..
T Consensus       164 ~~~~lrp~~v  173 (312)
T 2yy7_A          164 DVRSIRYPGL  173 (312)
T ss_dssp             EEECEEECEE
T ss_pred             cEEEEeCCeE
Confidence            4555555443

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.30  E-value=6.8e-12  Score=90.52  Aligned_cols=120  Identities=6%  Similarity=-0.050  Sum_probs=89.1

Q ss_pred             cccc-cccccceeccCCCC----C---CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTT-GHIHGILFIPWCLP----T---KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~-~~g~~v~~~~~~~~----~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|. ++|+.|..+.+...    .   .+.++.++.+|++|++++.++++      ++|++|||+|..            
T Consensus        23 ~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vv~~ag~~------------   84 (221)
T 3r6d_A           23 ATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT------NAEVVFVGAMES------------   84 (221)
T ss_dssp             HHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT------TCSEEEESCCCC------------
T ss_pred             HHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc------CCCEEEEcCCCC------------
Confidence            3456 68888888765432    1   45679999999999999988775      479999999853            


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCc----------hhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVS----------AYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~----------~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                             |+.     ++.+++.+++.+.++||++||..++.+.+...          .|+.+|.+++.+++.       .
T Consensus        85 -------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~  145 (221)
T 3r6d_A           85 -------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------S  145 (221)
T ss_dssp             -------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------S
T ss_pred             -------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh-------C
Confidence                   222     77788888887778999999988776544333          899999999988864       2


Q ss_pred             ccceeeeCCCccccc
Q psy5462         146 LWGTTVTTPLRSVTI  160 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~  160 (182)
                      ...+++..|++..+.
T Consensus       146 ~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          146 NLNYTILRLTWLYND  160 (221)
T ss_dssp             CSEEEEEEECEEECC
T ss_pred             CCCEEEEechhhcCC
Confidence            446666777765444

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.28  E-value=3.8e-11  Score=91.76  Aligned_cols=140  Identities=11%  Similarity=0.021  Sum_probs=97.1

Q ss_pred             cccccccccceeccCCCCC---------C---CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------K---THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|..+.+....         .   +.++.++.+|++|++++.++++      .+|+|||+|+...   +...
T Consensus        23 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~Vih~A~~~~---~~~~   93 (337)
T 2c29_D           23 MRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------GCTGVFHVATPMD---FESK   93 (337)
T ss_dssp             HHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------TCSEEEECCCCCC---SSCS
T ss_pred             HHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------CCCEEEEeccccC---CCCC
Confidence            4577889888765543221         1   2368899999999988877664      4799999998642   1111


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----------------------CCCchhhhhHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----------------------VNVSAYFASKY  129 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----------------------~~~~~y~~sKa  129 (182)
                        +..+..+++|+.++.++++++.+..   ..++||++||.+++.+.                      ++...|+.+|.
T Consensus        94 --~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~  168 (337)
T 2c29_D           94 --DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKT  168 (337)
T ss_dssp             --SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHH
Confidence              2235688999999999999987642   24799999998754321                      12346999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+++.++.+.+   .++.+..|+....+
T Consensus       169 ~~E~~~~~~~~~~g---i~~~~lrp~~v~Gp  196 (337)
T 2c29_D          169 LAEQAAWKYAKENN---IDFITIIPTLVVGP  196 (337)
T ss_dssp             HHHHHHHHHHHHHT---CCEEEEEECEEESC
T ss_pred             HHHHHHHHHHHHcC---CcEEEEeCCceECC
Confidence            99999988876543   35555666654444

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.27  E-value=3.7e-11  Score=91.90  Aligned_cols=139  Identities=12%  Similarity=0.076  Sum_probs=97.7

Q ss_pred             cccccc-cccceeccCCCCC-----CCceeEEEEccCCC-HHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGH-IHGILFIPWCLPT-----KTHVAVYFKADVSD-KAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~-g~~v~~~~~~~~~-----~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++ |+.|..+.+....     ...++.++.+|++| .+.+.++++.      +|+|||+||...+..    ..+++
T Consensus        18 ~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~------~d~vih~A~~~~~~~----~~~~~   87 (345)
T 2bll_A           18 ERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK------CDVVLPLVAIATPIE----YTRNP   87 (345)
T ss_dssp             HHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHH------CSEEEECBCCCCHHH----HHHSH
T ss_pred             HHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccC------CCEEEEcccccCccc----hhcCH
Confidence            345566 7888877654321     23468899999998 4567666653      799999999754321    13456


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC------------------CCchhhhhHHHHHHHHHHH
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV------------------NVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~------------------~~~~y~~sKaa~~~~~~~l  138 (182)
                      ...+++|+.++.++++++..    .+ ++||++||...+...+                  +...|+.+|.+.+.+++.+
T Consensus        88 ~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~  162 (345)
T 2bll_A           88 LRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY  162 (345)
T ss_dssp             HHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHH
Confidence            77899999999999998854    34 7999999976542211                  1238999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+   .++.+..|+....+
T Consensus       163 ~~~~~---~~~~ilrp~~v~G~  181 (345)
T 2bll_A          163 GEKEG---LQFTLFRPFNWMGP  181 (345)
T ss_dssp             HHHHC---CCEEEEEECSEECS
T ss_pred             HHhcC---CCEEEEcCCcccCC
Confidence            88753   35666666654433

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.27  E-value=1.9e-11  Score=91.59  Aligned_cols=114  Identities=14%  Similarity=0.120  Sum_probs=87.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+.           .+|++|++++.++++..    ++|+|||+||....    +.+.++++..+++|
T Consensus        30 ~~L~~~g~~V~~~~r~-----------~~Dl~d~~~~~~~~~~~----~~d~vih~A~~~~~----~~~~~~~~~~~~~n   90 (292)
T 1vl0_A           30 KQLKGKNVEVIPTDVQ-----------DLDITNVLAVNKFFNEK----KPNVVINCAAHTAV----DKCEEQYDLAYKIN   90 (292)
T ss_dssp             HHHTTSSEEEEEECTT-----------TCCTTCHHHHHHHHHHH----CCSEEEECCCCCCH----HHHHHCHHHHHHHH
T ss_pred             HHHHhCCCeEEeccCc-----------cCCCCCHHHHHHHHHhc----CCCEEEECCccCCH----HHHhcCHHHHHHHH
Confidence            3456667777766543           48999999999888765    58999999997432    12346688899999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-----------CCchhhhhHHHHHHHHHHHHhh
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-----------NVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +.++.++++++.+.    + .+||++||...+.+..           +...|+.+|++.+.+++.++.+
T Consensus        91 v~~~~~l~~a~~~~----~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~  154 (292)
T 1vl0_A           91 AIGPKNLAAAAYSV----G-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPK  154 (292)
T ss_dssp             THHHHHHHHHHHHH----T-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHc----C-CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCCC
Confidence            99999999998652    3 3999999987553322           3578999999999999988653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.25  E-value=3.9e-11  Score=88.97  Aligned_cols=115  Identities=17%  Similarity=0.120  Sum_probs=87.8

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHh
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL   84 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   84 (182)
                      +|. +|+.|..+.+..... .+   +.+|++|++++.++++.+    ++|++|||||.....    .+.++++..+++|+
T Consensus        19 ~L~-~g~~V~~~~r~~~~~-~~---~~~Dl~~~~~~~~~~~~~----~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~   85 (273)
T 2ggs_A           19 LLS-ERHEVIKVYNSSEIQ-GG---YKLDLTDFPRLEDFIIKK----RPDVIINAAAMTDVD----KCEIEKEKAYKINA   85 (273)
T ss_dssp             HHT-TTSCEEEEESSSCCT-TC---EECCTTSHHHHHHHHHHH----CCSEEEECCCCCCHH----HHHHCHHHHHHHHT
T ss_pred             HHh-cCCeEEEecCCCcCC-CC---ceeccCCHHHHHHHHHhc----CCCEEEECCcccChh----hhhhCHHHHHHHhH
Confidence            344 367777776543222 22   889999999999998875    589999999975421    23467889999999


Q ss_pred             HHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC----------CCchhhhhHHHHHHHHHH
Q psy5462          85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV----------NVSAYFASKYGVTENHPS  137 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~----------~~~~y~~sKaa~~~~~~~  137 (182)
                      .++.++++++.+    .+ ++||++||...+.+.+          +...|+.+|++.+.+++.
T Consensus        86 ~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A           86 EAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             HHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence            999999999864    23 5999999988764432          357999999999999887

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.25  E-value=1.2e-11  Score=93.85  Aligned_cols=140  Identities=10%  Similarity=-0.032  Sum_probs=93.6

Q ss_pred             cccccccccceeccC-CCCC---------C---CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPW-CLPT---------K---THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-~~~~---------~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|+++|+.|..+.+ ....         .   +.++.++.+|++|++++.++++      .+|+|||+|+..   .   
T Consensus        19 ~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~A~~~---~---   86 (322)
T 2p4h_X           19 KSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------GCVGIFHTASPI---D---   86 (322)
T ss_dssp             HHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------TCSEEEECCCCC-------
T ss_pred             HHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc------CCCEEEEcCCcc---c---
Confidence            457778988876654 2210         0   1357889999999998887765      479999999642   1   


Q ss_pred             CCH-HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC---------------------C-chhhhh
Q psy5462          71 HTD-HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN---------------------V-SAYFAS  127 (182)
Q Consensus        71 ~~~-~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~---------------------~-~~y~~s  127 (182)
                      .+. +.++..+++|+.++.++++++.+.   .+.++||++||..+..+.+.                     . ..|+.+
T Consensus        87 ~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~s  163 (322)
T 2p4h_X           87 FAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVS  163 (322)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHH
Confidence            122 224568899999999999998653   13579999999875432110                     1 169999


Q ss_pred             HHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         128 KYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       128 Kaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      |++.+.+++.++.+.   ..++.+..|++..++.
T Consensus       164 K~~~e~~~~~~~~~~---gi~~~~lrp~~v~g~~  194 (322)
T 2p4h_X          164 KTLAEKAVLEFGEQN---GIDVVTLILPFIVGRF  194 (322)
T ss_dssp             HHHHHHHHHHHHHHT---TCCEEEEEECEEESCC
T ss_pred             HHHHHHHHHHHHHhc---CCcEEEEcCCceECCC
Confidence            998888887776542   3466666676655443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.25  E-value=2.3e-12  Score=94.36  Aligned_cols=140  Identities=11%  Similarity=-0.011  Sum_probs=94.6

Q ss_pred             cccccc--cccceeccCCCC---CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc---------c
Q psy5462           4 DRTTGH--IHGILFIPWCLP---TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV---------L   69 (182)
Q Consensus         4 ~~l~~~--g~~v~~~~~~~~---~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~---------~   69 (182)
                      ++|.++  |+.|..+.+...   ..+.++.++.+|++|++++.++++      ++|++|||||.......         .
T Consensus        22 ~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~a~~~~~~~~~~~~~~~~~~   95 (253)
T 1xq6_A           22 KKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ------GIDALVILTSAVPKMKPGFDPTKGGRP   95 (253)
T ss_dssp             HHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT------TCSEEEECCCCCCEECTTCCTTSSCCC
T ss_pred             HHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHc------CCCEEEEeccccccccccccccccccc
Confidence            345566  677777764321   124567899999999998888765      48999999997542110         1


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCch-----hhhhHHHHHHHHHHHHhhhCC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSA-----YFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~-----y~~sKaa~~~~~~~la~e~~~  144 (182)
                      +...+++...+++|+.++.++++++.+    .+.++||++||..+..+.++...     |+.+|++++.+++.       
T Consensus        96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------  164 (253)
T 1xq6_A           96 EFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD-------  164 (253)
T ss_dssp             CEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------
T ss_pred             hhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh-------
Confidence            112344456789999999999988754    34579999999887654444434     55689999888763       


Q ss_pred             CccceeeeCCCccccc
Q psy5462         145 MLWGTTVTTPLRSVTI  160 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~  160 (182)
                      ...++.+..|++..++
T Consensus       165 ~~i~~~~vrpg~v~~~  180 (253)
T 1xq6_A          165 SGTPYTIIRAGGLLDK  180 (253)
T ss_dssp             SSSCEEEEEECEEECS
T ss_pred             CCCceEEEecceeecC
Confidence            2446666666655443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.25  E-value=2.9e-11  Score=93.68  Aligned_cols=137  Identities=13%  Similarity=0.114  Sum_probs=100.9

Q ss_pred             cccccc-cccceeccCCCCCC-----CceeEEEEccCC-CHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGH-IHGILFIPWCLPTK-----THVAVYFKADVS-DKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~-g~~v~~~~~~~~~~-----~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++ |+.|..+.+.....     ..++.++.+|++ |.+.+.++++.      +|+|||+|+......    ..++.
T Consensus        42 ~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~------~d~Vih~A~~~~~~~----~~~~~  111 (372)
T 3slg_A           42 KRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKK------CDVILPLVAIATPAT----YVKQP  111 (372)
T ss_dssp             HHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHH------CSEEEECBCCCCHHH----HHHCH
T ss_pred             HHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhcc------CCEEEEcCccccHHH----HhhCH
Confidence            356666 88888887654332     257999999999 99999988874      799999999764321    23456


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------------CCCchhhhhHHHHHHHHHHH
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------------VNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ...+++|+.++.++++++...    + .++|++||...+...                  .+...|+.+|.+.+.+++.+
T Consensus       112 ~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~  186 (372)
T 3slg_A          112 LRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGY  186 (372)
T ss_dssp             HHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence            678899999999999988543    4 799999997543221                  23347999999999999999


Q ss_pred             HhhhCCCccceeeeCCCcccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~  159 (182)
                      +.+    ..++.+..|.....
T Consensus       187 ~~~----g~~~~ilRp~~v~G  203 (372)
T 3slg_A          187 GME----GLNFTLFRPFNWIG  203 (372)
T ss_dssp             HTT----TCEEEEEEECSEEC
T ss_pred             HHC----CCCEEEEccccccC
Confidence            887    23566666655433

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.24  E-value=4.5e-11  Score=99.91  Aligned_cols=139  Identities=14%  Similarity=0.162  Sum_probs=98.9

Q ss_pred             cccccccccceeccCCCCCC-----------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|+++|+.|..+++.....           +.++.++.+|++|++++.++++..    ++|+|||+||......    .
T Consensus        29 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----~~D~Vih~A~~~~~~~----~  100 (699)
T 1z45_A           29 VELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY----KIDSVIHFAGLKAVGE----S  100 (699)
T ss_dssp             HHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS----CCCEEEECCSCCCHHH----H
T ss_pred             HHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC----CCCEEEECCcccCcCc----c
Confidence            45677888888876543221           356789999999999998887753    5899999999754321    1


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---------------cCCCchhhhhHHHHHHHHHH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---------------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---------------~~~~~~y~~sKaa~~~~~~~  137 (182)
                      .+.....+++|+.++.++++++..    .+.++||++||.+.+..               ..+...|+.+|++.+.+++.
T Consensus       101 ~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  176 (699)
T 1z45_A          101 TQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILND  176 (699)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHH
Confidence            233456789999999999887643    34579999999765421               12347899999999999999


Q ss_pred             HHhhhCCCccceeeeCCC
Q psy5462         138 IKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~  155 (182)
                      ++.+.. ...++.+..|.
T Consensus       177 ~~~~~~-~g~~~~ilR~~  193 (699)
T 1z45_A          177 LYNSDK-KSWKFAILRYF  193 (699)
T ss_dssp             HHHHST-TSCEEEEEEEC
T ss_pred             HHHhcc-CCCcEEEEEec
Confidence            988741 12344444443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.23  E-value=5.9e-11  Score=89.81  Aligned_cols=134  Identities=13%  Similarity=0.034  Sum_probs=97.8

Q ss_pred             cccccccccceeccCCCCCCC--ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT--HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+.|..+.+. ....  .++.++.+|++ ++++.++++      ++|+|||+|+.....        +....++
T Consensus        20 ~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~Dl~-~~~~~~~~~------~~d~Vih~a~~~~~~--------~~~~~~~   83 (311)
T 3m2p_A           20 ESIKNDGNTPIILTRS-IGNKAINDYEYRVSDYT-LEDLINQLN------DVDAVVHLAATRGSQ--------GKISEFH   83 (311)
T ss_dssp             HHHHHTTCEEEEEESC-CC-----CCEEEECCCC-HHHHHHHTT------TCSEEEECCCCCCSS--------SCGGGTH
T ss_pred             HHHHhCCCEEEEEeCC-CCcccCCceEEEEcccc-HHHHHHhhc------CCCEEEEccccCCCC--------ChHHHHH
Confidence            4567789988888766 2222  26889999999 888777665      589999999986543        2345678


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +|+.++.++++++..    .+..++|++||...+.+           ..+...|+.+|.+.+.+++.++.+.+   .++.
T Consensus        84 ~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g---~~~~  156 (311)
T 3m2p_A           84 DNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKG---LCIK  156 (311)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSC---CEEE
T ss_pred             HHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcC---CCEE
Confidence            999999999998853    34568999999765422           12357999999999999999988643   3666


Q ss_pred             eeCCCccccc
Q psy5462         151 VTTPLRSVTI  160 (182)
Q Consensus       151 v~~~~~~~~~  160 (182)
                      +..|.....+
T Consensus       157 ilRp~~v~G~  166 (311)
T 3m2p_A          157 NLRFAHLYGF  166 (311)
T ss_dssp             EEEECEEECS
T ss_pred             EEeeCceeCc
Confidence            6666654443

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.23  E-value=1.2e-11  Score=95.31  Aligned_cols=139  Identities=12%  Similarity=0.042  Sum_probs=98.4

Q ss_pred             ccccccc-ccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHI-HGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++| +.|..+.+.....    -.++. +.+|++|++.++.+++.  . ++++|+|||+||....      +.++++
T Consensus        64 ~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~------~~~~~~  134 (357)
T 2x6t_A           64 KALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAG--EEFGDVEAIFHEGACSST------TEWDGK  134 (357)
T ss_dssp             HHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTT--CCCSSCCEEEECCSCCCT------TCCCHH
T ss_pred             HHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhh--cccCCCCEEEECCcccCC------ccCCHH
Confidence            3466677 7777765432210    01223 77899999988887763  2 5679999999997543      223467


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC-----------CCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV-----------NVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~-----------~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      ..+++|+.++.++++++.+.    +. +||++||...+.+.+           +...|+.+|.+.+.+++.++.+.+   
T Consensus       135 ~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g---  206 (357)
T 2x6t_A          135 YMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEAN---  206 (357)
T ss_dssp             HHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGCS---
T ss_pred             HHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHcC---
Confidence            78999999999999998762    34 999999987653322           256899999999999999988743   


Q ss_pred             cceeeeCCCcccc
Q psy5462         147 WGTTVTTPLRSVT  159 (182)
Q Consensus       147 ~~i~v~~~~~~~~  159 (182)
                      .++.+..|+....
T Consensus       207 ~~~~ilRp~~v~G  219 (357)
T 2x6t_A          207 SQIVGFRYFNVYG  219 (357)
T ss_dssp             SCEEEEEECEEES
T ss_pred             CCEEEEecCeEEC
Confidence            3556666655443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.23  E-value=1.6e-11  Score=97.02  Aligned_cols=135  Identities=11%  Similarity=0.050  Sum_probs=95.4

Q ss_pred             cccccccccceeccCCCC----------------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAG   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag   61 (182)
                      ++|.++|+.|..+.+...                      ..+.++.++.+|++|++++.       .++++|+|||||+
T Consensus        87 ~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-------~~~~~d~Vih~A~  159 (427)
T 4f6c_A           87 EALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-------LPENMDTIIHAGA  159 (427)
T ss_dssp             HHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-------CSSCCSEEEECCC
T ss_pred             HHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-------CcCCCCEEEECCc
Confidence            456677888888765543                      11367899999999988877       3367999999999


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc--c----------------cccCCCch
Q psy5462          62 IVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA--L----------------TAAVNVSA  123 (182)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~--~----------------~~~~~~~~  123 (182)
                      ...       ..++++..+++|+.++.++++++.+     +..+||++||...  .                .+..+...
T Consensus       160 ~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~  227 (427)
T 4f6c_A          160 RTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSP  227 (427)
T ss_dssp             CC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSH
T ss_pred             ccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCCCCccccccccccCCCCCCc
Confidence            753       2356778899999999999999865     3579999999876  0                01226689


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462         124 YFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus       124 y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      |+.+|.+.+.+++.++..    ..++.+..|++...+.
T Consensus       228 Y~~sK~~~E~~~~~~~~~----g~~~~ivRpg~v~G~~  261 (427)
T 4f6c_A          228 YTRSKFYSELKVLEAVNN----GLDGRIVRVGNLTSPY  261 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TCCEEEEEECCEESCS
T ss_pred             hHHHHHHHHHHHHHHHHc----CCCEEEEeCCeeecCC
Confidence            999999999999987642    4577777777655443

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.20  E-value=1.9e-10  Score=81.64  Aligned_cols=126  Identities=13%  Similarity=0.013  Sum_probs=89.9

Q ss_pred             cccccccccceeccCCCCC---C-CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---K-THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.+..+.+....   . ..++.++.+|++|++++.++++      .+|++||++|......     +      
T Consensus        21 ~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~vi~~a~~~~~~~-----~------   83 (206)
T 1hdo_A           21 AQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA------GQDAVIVLLGTRNDLS-----P------   83 (206)
T ss_dssp             HHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT------TCSEEEECCCCTTCCS-----C------
T ss_pred             HHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHc------CCCEEEECccCCCCCC-----c------
Confidence            4566778888877654321   1 4578899999999998887765      4799999998754311     1      


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC----CCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV----NVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~----~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      .++|+.++.++++++.+    .+.++||++||...+...+    +...|+.+|++++.+++.       ...++.+..|+
T Consensus        84 ~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~  152 (206)
T 1hdo_A           84 TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPP  152 (206)
T ss_dssp             CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCS
T ss_pred             cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCC
Confidence            13778888888887754    3457999999987654433    567899999999998853       23466666776


Q ss_pred             cc
Q psy5462         156 RS  157 (182)
Q Consensus       156 ~~  157 (182)
                      +.
T Consensus       153 ~~  154 (206)
T 1hdo_A          153 HI  154 (206)
T ss_dssp             EE
T ss_pred             cc
Confidence            54

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.20  E-value=3.6e-11  Score=89.87  Aligned_cols=114  Identities=13%  Similarity=0.123  Sum_probs=86.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+           ..+|++|.+++.++++..    ++|++||+|+......    ..+++...+++|
T Consensus        23 ~~L~~~g~~V~~~~r-----------~~~D~~d~~~~~~~~~~~----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n   83 (287)
T 3sc6_A           23 EELNPEEYDIYPFDK-----------KLLDITNISQVQQVVQEI----RPHIIIHCAAYTKVDQ----AEKERDLAYVIN   83 (287)
T ss_dssp             HHSCTTTEEEEEECT-----------TTSCTTCHHHHHHHHHHH----CCSEEEECCCCCCHHH----HTTCHHHHHHHH
T ss_pred             HHHHhCCCEEEEecc-----------cccCCCCHHHHHHHHHhc----CCCEEEECCcccChHH----HhcCHHHHHHHH
Confidence            345666777666665           348999999999998875    5899999999864211    124577889999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +.++.++++++.+.    + .++|++||...+.+           ..+...|+.+|.+.+.+++.++.+
T Consensus        84 ~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  147 (287)
T 3sc6_A           84 AIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNK  147 (287)
T ss_dssp             THHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            99999999998653    2 48999999875532           123579999999999999988764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.19  E-value=2.1e-10  Score=86.93  Aligned_cols=133  Identities=11%  Similarity=0.037  Sum_probs=94.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.+..+....          .+|++|.+++.++++..    ++|+|||+|+.....   ....++....+++|
T Consensus        21 ~~L~~~g~~v~~~~r~~----------~~D~~d~~~~~~~~~~~----~~d~vih~a~~~~~~---~~~~~~~~~~~~~n   83 (321)
T 1e6u_A           21 RQLEQRGDVELVLRTRD----------ELNLLDSRAVHDFFASE----RIDQVYLAAAKVGGI---VANNTYPADFIYQN   83 (321)
T ss_dssp             HHHTTCTTEEEECCCTT----------TCCTTCHHHHHHHHHHH----CCSEEEECCCCCCCH---HHHHHCHHHHHHHH
T ss_pred             HHHHhCCCeEEEEecCc----------cCCccCHHHHHHHHHhc----CCCEEEEcCeecCCc---chhhhCHHHHHHHH
Confidence            34566777766654321          47999999999888765    589999999875321   11234567789999


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc----------------cCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA----------------AVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.++.++++++.+    .+.+++|++||...+.+                .+....|+.+|.+.+.+++.++.+.+   .
T Consensus        84 ~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~---~  156 (321)
T 1e6u_A           84 MMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG---R  156 (321)
T ss_dssp             HHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHC---C
T ss_pred             HHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhC---C
Confidence            9999999998854    34569999999775421                11125899999999999999988753   3


Q ss_pred             ceeeeCCCccccc
Q psy5462         148 GTTVTTPLRSVTI  160 (182)
Q Consensus       148 ~i~v~~~~~~~~~  160 (182)
                      ++.+..|++...+
T Consensus       157 ~~~ilrp~~v~G~  169 (321)
T 1e6u_A          157 DYRSVMPTNLYGP  169 (321)
T ss_dssp             EEEEEEECEEEST
T ss_pred             CEEEEEeCCcCCc
Confidence            5666666654443

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.18  E-value=1.2e-11  Score=94.66  Aligned_cols=140  Identities=12%  Similarity=0.015  Sum_probs=91.7

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|+++|+.|..+.+....           ...++.++.+|++|++++.++++      ++|+|||+|+....   .  .
T Consensus        27 ~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~Vih~A~~~~~---~--~   95 (338)
T 2rh8_A           27 KLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA------GCDFVFHVATPVHF---A--S   95 (338)
T ss_dssp             HHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT------TCSEEEEESSCCCC-------
T ss_pred             HHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc------CCCEEEEeCCccCC---C--C
Confidence            4577889988765543221           12367889999999988777654      47999999986421   1  1


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc---------------------C---CCchhhhhH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA---------------------V---NVSAYFASK  128 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~---------------------~---~~~~y~~sK  128 (182)
                      .+..+..+++|+.++.++++++.+..   +.++||++||.++..+.                     +   ....|+.+|
T Consensus        96 ~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK  172 (338)
T 2rh8_A           96 EDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASK  172 (338)
T ss_dssp             -------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHH
Confidence            12224588999999999999986531   24799999997643210                     0   011599999


Q ss_pred             HHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         129 YGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       129 aa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++.+.+++.++.+.+   .++.+..|+....+
T Consensus       173 ~~~E~~~~~~~~~~g---i~~~~lrp~~v~Gp  201 (338)
T 2rh8_A          173 TLAEKAAWKFAEENN---IDLITVIPTLMAGS  201 (338)
T ss_dssp             CHHHHHHHHHHHHHT---CCEEEEEECEEESC
T ss_pred             HHHHHHHHHHHHHcC---CcEEEEeCCceECC
Confidence            999999888876533   35566666654444

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.16  E-value=8.1e-12  Score=89.48  Aligned_cols=130  Identities=12%  Similarity=0.023  Sum_probs=94.5

Q ss_pred             cccccccc--cceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIH--GILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.++|+  .+..+.+.......++.++.+|++|++++.++      +  +|++||+||....      +.++++..++
T Consensus        23 ~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~------~--~d~vi~~a~~~~~------~~~~~~~~~~   88 (215)
T 2a35_A           23 DRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG------S--IDTAFCCLGTTIK------EAGSEEAFRA   88 (215)
T ss_dssp             HHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCS------C--CSEEEECCCCCHH------HHSSHHHHHH
T ss_pred             HHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHh------h--hcEEEECeeeccc------cCCCHHHHHH
Confidence            45677787  77777765544456788899999887655443      2  7999999996432      2345777889


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc-eeeeCCCccccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG-TTVTTPLRSVTI  160 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~-i~v~~~~~~~~~  160 (182)
                      +|+.++.++++++.+    .+.++||++||...+.  ++...|+.+|++.+.+++.+       ..+ +.+..|++...+
T Consensus        89 ~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e~~~~~~-------~~~~~~~vrp~~v~g~  155 (215)
T 2a35_A           89 VDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVKGELEQALQEQ-------GWPQLTIARPSLLFGP  155 (215)
T ss_dssp             HHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHTTS-------CCSEEEEEECCSEEST
T ss_pred             hhHHHHHHHHHHHHH----cCCCEEEEECCcccCC--CCccHHHHHHHHHHHHHHHc-------CCCeEEEEeCceeeCC
Confidence            999999999998754    3457899999987654  24568999999999988752       335 666777765544

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.16  E-value=7.2e-11  Score=89.00  Aligned_cols=120  Identities=16%  Similarity=0.066  Sum_probs=86.1

Q ss_pred             eeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCe
Q psy5462          26 VAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGH  105 (182)
Q Consensus        26 ~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~  105 (182)
                      .+..+.+|++|++++.++++..    ++|+|||+|+......   .+.++....+++|+.++.++++++..    .+..+
T Consensus        39 ~~~~~~~D~~d~~~~~~~~~~~----~~d~Vih~A~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~  107 (319)
T 4b8w_A           39 FVSSKDADLTDTAQTRALFEKV----QPTHVIHLAAMVGGLF---RNIKYNLDFWRKNVHMNDNVLHSAFE----VGARK  107 (319)
T ss_dssp             ECCTTTCCTTSHHHHHHHHHHS----CCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSE
T ss_pred             ccCceecccCCHHHHHHHHhhc----CCCEEEECceeccccc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCe
Confidence            3445579999999999988763    5899999999853211   12234566789999999999998754    34568


Q ss_pred             EEEEeccccccc----------------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462         106 IVCISSIAALTA----------------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       106 ii~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      +|++||...+..                .+....|+.+|.+.+.+++.++.+.+   .++.+..|.....
T Consensus       108 ~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~ilRp~~v~G  174 (319)
T 4b8w_A          108 VVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYG---CTFTAVIPTNVFG  174 (319)
T ss_dssp             EEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECEEEC
T ss_pred             EEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhC---CCEEEEeeccccC
Confidence            999999865421                11122699999999999999988864   3556666654443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.14  E-value=5e-10  Score=93.08  Aligned_cols=139  Identities=13%  Similarity=0.090  Sum_probs=99.0

Q ss_pred             cccccc-cccceeccCCCCC-----CCceeEEEEccCCCHHH-HHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGH-IHGILFIPWCLPT-----KTHVAVYFKADVSDKAE-IKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~-g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++ |+.|..+.+....     ...++.++.+|++|.++ +.++++      ++|+|||+||......    ..+++
T Consensus       333 ~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~------~~D~Vih~Aa~~~~~~----~~~~~  402 (660)
T 1z7e_A          333 ERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK------KCDVVLPLVAIATPIE----YTRNP  402 (660)
T ss_dssp             HHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH------HCSEEEECCCCCCTHH----HHHSH
T ss_pred             HHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc------CCCEEEECceecCccc----cccCH
Confidence            345666 7888877654332     23578899999999765 555555      3799999999754321    23456


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------------CCCchhhhhHHHHHHHHHHH
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------------VNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ...+++|+.++.++++++.+    .+ +++|++||...+.+.                  .+...|+.+|.+.+.+++.+
T Consensus       403 ~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~  477 (660)
T 1z7e_A          403 LRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY  477 (660)
T ss_dssp             HHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHH
Confidence            77899999999999998864    34 799999997654221                  12337999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+   .++.+..|+....+
T Consensus       478 ~~~~g---i~~~ilRpg~v~Gp  496 (660)
T 1z7e_A          478 GEKEG---LQFTLFRPFNWMGP  496 (660)
T ss_dssp             HHHHC---CCEEEEEECSEEST
T ss_pred             HHHcC---CCEEEECCCcccCC
Confidence            88753   36666666655443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.13  E-value=1.1e-10  Score=87.70  Aligned_cols=115  Identities=13%  Similarity=0.086  Sum_probs=85.3

Q ss_pred             ccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHh
Q psy5462           5 RTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL   84 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~   84 (182)
                      +|. +|+.|..+.+..       ..+.+|++|++++.++++..    ++|++||+|+.....    .+.++++..+++|+
T Consensus        19 ~L~-~g~~V~~~~r~~-------~~~~~D~~d~~~~~~~~~~~----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~   82 (299)
T 1n2s_A           19 SLA-PVGNLIALDVHS-------KEFCGDFSNPKGVAETVRKL----RPDVIVNAAAHTAVD----KAESEPELAQLLNA   82 (299)
T ss_dssp             HTT-TTSEEEEECTTC-------SSSCCCTTCHHHHHHHHHHH----CCSEEEECCCCCCHH----HHTTCHHHHHHHHT
T ss_pred             Hhh-cCCeEEEecccc-------ccccccCCCHHHHHHHHHhc----CCCEEEECcccCCHh----hhhcCHHHHHHHHH
Confidence            455 688887776543       24679999999999888764    589999999875321    11234667889999


Q ss_pred             HHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHh
Q psy5462          85 MSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        85 ~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .++.++++++..    .+ .++|++||...+.+.           .+...|+.+|.+.+.+++.++.
T Consensus        83 ~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  144 (299)
T 1n2s_A           83 TSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP  144 (299)
T ss_dssp             HHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC
Confidence            999999998853    23 489999998754322           2257899999999999988754

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.10  E-value=2.2e-11  Score=91.08  Aligned_cols=128  Identities=10%  Similarity=-0.013  Sum_probs=92.7

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.|..+.+.......++.++.+|++|++++.++++     +++|+|||+|+..         ..+.+..+++|
T Consensus        20 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~~d~vih~a~~~---------~~~~~~~~~~n   85 (286)
T 3gpi_A           20 RRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVH-----LRPEILVYCVAAS---------EYSDEHYRLSY   85 (286)
T ss_dssp             HHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGG-----GCCSEEEECHHHH---------HHC-----CCS
T ss_pred             HHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhc-----CCCCEEEEeCCCC---------CCCHHHHHHHH
Confidence            456778999999988776667889999999999988777654     3599999999863         23345677899


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      +.++.++++++.    +.+.+++|++||...+..           ..+...|+.+|.+.+.+ +..        .++.+.
T Consensus        86 ~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~il  152 (286)
T 3gpi_A           86 VEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTIL  152 (286)
T ss_dssp             HHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEE
T ss_pred             HHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEE
Confidence            999999998874    345579999999765432           12357999999999888 543        355566


Q ss_pred             CCCccc
Q psy5462         153 TPLRSV  158 (182)
Q Consensus       153 ~~~~~~  158 (182)
                      .|+...
T Consensus       153 R~~~v~  158 (286)
T 3gpi_A          153 RFSGIY  158 (286)
T ss_dssp             EECEEE
T ss_pred             eccccc
Confidence            665444

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.09  E-value=5.6e-10  Score=85.50  Aligned_cols=134  Identities=10%  Similarity=-0.001  Sum_probs=93.9

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.++|+.|..+.+....         ...++.++.+|+++..           +.++|+|||+|+.......    .+
T Consensus        45 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~d~vih~A~~~~~~~~----~~  109 (343)
T 2b69_A           45 DKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNY----MY  109 (343)
T ss_dssp             HHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHH----TT
T ss_pred             HHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----------hcCCCEEEECccccCchhh----hh
Confidence            4566778888877643211         1346889999998742           3579999999997543211    12


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc----------------ccCCCchhhhhHHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT----------------AAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~----------------~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      +++..+++|+.++.++++++.+.    + .++|++||...+.                +..+...|+.+|++.+.+++.+
T Consensus       110 ~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  184 (343)
T 2b69_A          110 NPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  184 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            34577899999999999988652    3 4999999976542                2233567999999999999999


Q ss_pred             HhhhCCCccceeeeCCCccccc
Q psy5462         139 KCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       139 a~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.+   .++.+..|+....+
T Consensus       185 ~~~~~---~~~~ilrp~~v~G~  203 (343)
T 2b69_A          185 MKQEG---VEVRVARIFNTFGP  203 (343)
T ss_dssp             HHHHC---CCEEEEEECCEECT
T ss_pred             HHHhC---CcEEEEEEcceeCc
Confidence            88753   35666666554433

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.09  E-value=2.8e-10  Score=85.72  Aligned_cols=141  Identities=12%  Similarity=0.023  Sum_probs=96.9

Q ss_pred             ccccccc-ccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHI-HGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++| +.|..+.+.....    -.++. +.+|++|.+.+..+++... ++++|+|||+|+....      ..++++.
T Consensus        17 ~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~-~~~~d~vi~~a~~~~~------~~~~~~~   88 (310)
T 1eq2_A           17 KALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEE-FGDVEAIFHEGACSST------TEWDGKY   88 (310)
T ss_dssp             HHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCC-CSSCCEEEECCSCCCT------TCCCHHH
T ss_pred             HHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccc-cCCCcEEEECcccccC------cccCHHH
Confidence            4566778 7777776443211    01223 6789999888877665210 2369999999997543      2234567


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      .+++|+.++.++++++.+.    +. ++|++||...+.+.           .+...|+.+|.+.+.+++.++.+.   ..
T Consensus        89 ~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~  160 (310)
T 1eq2_A           89 MMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NS  160 (310)
T ss_dssp             HHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SS
T ss_pred             HHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CC
Confidence            8899999999999998653    44 99999998654321           225689999999999999998774   34


Q ss_pred             ceeeeCCCccccc
Q psy5462         148 GTTVTTPLRSVTI  160 (182)
Q Consensus       148 ~i~v~~~~~~~~~  160 (182)
                      ++.+..|++...+
T Consensus       161 ~~~~lrp~~v~G~  173 (310)
T 1eq2_A          161 QIVGFRYFNVYGP  173 (310)
T ss_dssp             CEEEEEECEEESS
T ss_pred             CEEEEeCCcEECc
Confidence            6666666654433

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.06  E-value=1.3e-10  Score=83.74  Aligned_cols=129  Identities=12%  Similarity=0.026  Sum_probs=87.0

Q ss_pred             cccccccccceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+....    ...++.++.+|++|+++     +.   ++++|+||||||......    .       
T Consensus        18 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~---~~~~d~vi~~ag~~~~~~----~-------   78 (224)
T 3h2s_A           18 AEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----AD---LDSVDAVVDALSVPWGSG----R-------   78 (224)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HH---HTTCSEEEECCCCCTTSS----C-------
T ss_pred             HHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-----hh---cccCCEEEECCccCCCcc----h-------
Confidence            4567789988888754321    23578999999999887     22   367999999999862211    1       


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC--------------CchhhhhHHHHHHHHHHHHhhhCCC
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN--------------VSAYFASKYGVTENHPSIKCFSGYM  145 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~--------------~~~y~~sKaa~~~~~~~la~e~~~~  145 (182)
                      ..+|+.++.+++++    +++.+ +++|++||.+++.+.+.              ...|+.+|++.+.+ +.+..+   .
T Consensus        79 ~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~---~  149 (224)
T 3h2s_A           79 GYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFLQMN---A  149 (224)
T ss_dssp             THHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHHTTC---T
T ss_pred             hhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHHHhc---C
Confidence            24566666555554    45566 89999999876554333              67899999998854 333322   3


Q ss_pred             ccceeeeCCCccccc
Q psy5462         146 LWGTTVTTPLRSVTI  160 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~  160 (182)
                      ..++++..|++..++
T Consensus       150 ~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          150 NVNWIGISPSEAFPS  164 (224)
T ss_dssp             TSCEEEEEECSBCCC
T ss_pred             CCcEEEEcCccccCC
Confidence            457777777765543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.00  E-value=2.7e-10  Score=81.72  Aligned_cols=129  Identities=11%  Similarity=0.119  Sum_probs=83.9

Q ss_pred             cccccccccceeccCCCCCCC---ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKT---HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.|..+.+......   .++.++.+|++|+++     +.   +.++|++||+||.....             .
T Consensus        18 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~-----~~---~~~~d~vi~~ag~~~~~-------------~   76 (221)
T 3ew7_A           18 EEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL-----SD---LSDQNVVVDAYGISPDE-------------A   76 (221)
T ss_dssp             HHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH-----HH---HTTCSEEEECCCSSTTT-------------T
T ss_pred             HHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh-----hh---hcCCCEEEECCcCCccc-------------c
Confidence            457778998888876542211   578899999999887     22   35799999999984321             2


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC------------CCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV------------NVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~------------~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .+|+.++.+++++    +++.+.+++|++||..++.+.+            +...|+.+|++.+.+ +.+..+  ....+
T Consensus        77 ~~~~~~~~~l~~a----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~-~~~~~~--~~gi~  149 (221)
T 3ew7_A           77 EKHVTSLDHLISV----LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLKSH--QAEFS  149 (221)
T ss_dssp             TSHHHHHHHHHHH----HCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHH-HHHHTT--TTTSC
T ss_pred             chHHHHHHHHHHH----HHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHH-HHHHhh--ccCcc
Confidence            3355555555554    4555678999999987755432            245699999999887 334431  23457


Q ss_pred             eeeeCCCccccc
Q psy5462         149 TTVTTPLRSVTI  160 (182)
Q Consensus       149 i~v~~~~~~~~~  160 (182)
                      +++..|++..++
T Consensus       150 ~~ivrp~~v~g~  161 (221)
T 3ew7_A          150 WTYISPSAMFEP  161 (221)
T ss_dssp             EEEEECSSCCCC
T ss_pred             EEEEeCcceecC
Confidence            788888766544

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.00  E-value=8.7e-10  Score=88.36  Aligned_cols=114  Identities=16%  Similarity=0.157  Sum_probs=83.9

Q ss_pred             ceeEEEEccCC------CHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHH
Q psy5462          25 HVAVYFKADVS------DKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDM   98 (182)
Q Consensus        25 ~~~~~~~~D~s------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l   98 (182)
                      .++.++.+|++      |.+.+.++++.      +|+|||||+.....        .++..+++|+.++.++++++..  
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~------~D~Vih~Aa~~~~~--------~~~~~~~~Nv~gt~~ll~aa~~--  203 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAET------VDLIVDSAAMVNAF--------PYHELFGPNVAGTAELIRIALT--  203 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHHH------CCEEEECCSSCSBS--------SCCEEHHHHHHHHHHHHHHHTS--
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHcC------CCEEEECccccCCc--------CHHHHHHHHHHHHHHHHHHHHh--
Confidence            58999999998      66677777663      79999999986431        2335678999999999998753  


Q ss_pred             HhCCCCeEEEEeccccccccCC----------------------CchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          99 LENNTGHIVCISSIAALTAAVN----------------------VSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        99 ~~~~~~~ii~iss~~~~~~~~~----------------------~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                        .+..+||++||...+.....                      ...|+.+|.+.+.+++.++.+.+   .++.+..|++
T Consensus       204 --~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g---i~~~ivRpg~  278 (478)
T 4dqv_A          204 --TKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCA---LPVAVFRCGM  278 (478)
T ss_dssp             --SSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHC---CCEEEEEECE
T ss_pred             --CCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhC---CCeEEEECce
Confidence              34468999999765332110                      13499999999999999988753   3666666765


Q ss_pred             ccc
Q psy5462         157 SVT  159 (182)
Q Consensus       157 ~~~  159 (182)
                      +..
T Consensus       279 v~G  281 (478)
T 4dqv_A          279 ILA  281 (478)
T ss_dssp             EEC
T ss_pred             eeC
Confidence            443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.99  E-value=2.3e-09  Score=78.03  Aligned_cols=88  Identities=10%  Similarity=0.045  Sum_probs=61.7

Q ss_pred             ccccccc-ccceeccCCCC----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHI-HGILFIPWCLP----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|+++| +.|..+.+...    ....++.++.+|++|++++.++++      .+|+||||+|..        +.+    
T Consensus        41 ~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~D~vv~~a~~~--------~~~----  102 (236)
T 3qvo_A           41 NQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ------GQDIVYANLTGE--------DLD----  102 (236)
T ss_dssp             HHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT------TCSEEEEECCST--------THH----
T ss_pred             HHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc------CCCEEEEcCCCC--------chh----
Confidence            4677888 78887764432    124578999999999999888776      479999999851        111    


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccC
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAV  119 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~  119 (182)
                                ..++.+++.+++.+.++||++||..++.+.+
T Consensus       103 ----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~  133 (236)
T 3qvo_A          103 ----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVP  133 (236)
T ss_dssp             ----------HHHHHHHHHHHHTTCCEEEEECCCCC-----
T ss_pred             ----------HHHHHHHHHHHHcCCCEEEEEecceecCCCC
Confidence                      2355777778887778999999988765433

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=98.89  E-value=1.5e-08  Score=75.57  Aligned_cols=121  Identities=10%  Similarity=-0.016  Sum_probs=86.3

Q ss_pred             cccccc--cccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGH--IHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~--g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++  |+.|..+.+.....    ..++.++.+|++|++++.++++      ++|++||+|+...       . +   
T Consensus        18 ~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~------~~d~vi~~a~~~~-------~-~---   80 (287)
T 2jl1_A           18 QHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFA------GVSKLLFISGPHY-------D-N---   80 (287)
T ss_dssp             HHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTT------TCSEEEECCCCCS-------C-H---
T ss_pred             HHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHh------cCCEEEEcCCCCc-------C-c---
Confidence            356666  89888887654322    1357899999999998877755      4899999998521       1 1   


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                         ++|+.++.++++++..    .+.++||++||.....   ....|+.+|.+.+.+++.       ...++.+..|++.
T Consensus        81 ---~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~  143 (287)
T 2jl1_A           81 ---TLLIVQHANVVKAARD----AGVKHIAYTGYAFAEE---SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALY  143 (287)
T ss_dssp             ---HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGGG---CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCB
T ss_pred             ---hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCCC---CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEe
Confidence               5788888888888743    4457999999987642   234899999999988863       2345666666544


Q ss_pred             c
Q psy5462         158 V  158 (182)
Q Consensus       158 ~  158 (182)
                      .
T Consensus       144 ~  144 (287)
T 2jl1_A          144 T  144 (287)
T ss_dssp             H
T ss_pred             c
Confidence            3

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=98.88  E-value=2.3e-09  Score=86.46  Aligned_cols=134  Identities=11%  Similarity=0.044  Sum_probs=94.1

Q ss_pred             cccccccccceeccCCCC----------------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEccc
Q psy5462           4 DRTTGHIHGILFIPWCLP----------------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAG   61 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag   61 (182)
                      ++|.++|+.|..+.+...                      ....++.++.+|+++++++.       ...++|+|||+|+
T Consensus       168 ~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-------~~~~~D~Vih~Aa  240 (508)
T 4f6l_B          168 EALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-------LPENMDTIIHAGA  240 (508)
T ss_dssp             HHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-------CSSCCSEEEECCC
T ss_pred             HHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-------CccCCCEEEECCc
Confidence            345677888888765543                      12468999999999987776       2357999999999


Q ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc--cc----------------ccCCCch
Q psy5462          62 IVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA--LT----------------AAVNVSA  123 (182)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~--~~----------------~~~~~~~  123 (182)
                      ....       ...++..+++|+.++.++++++.+     +..++|++||...  +.                +..+...
T Consensus       241 ~~~~-------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~  308 (508)
T 4f6l_B          241 RTDH-------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSP  308 (508)
T ss_dssp             C---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSH
T ss_pred             eecC-------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccCCcCcccccccccccccCCCc
Confidence            7531       234567788999999999998854     3579999999775  10                0124679


Q ss_pred             hhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462         124 YFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       124 y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      |+.+|.+.+.+++.++..    +.++.+..|+.....
T Consensus       309 Y~~sK~~~E~~~~~~~~~----gi~~~ilRp~~v~G~  341 (508)
T 4f6l_B          309 YTRSKFYSELKVLEAVNN----GLDGRIVRVGNLTSP  341 (508)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TCEEEEEEECCEESC
T ss_pred             HHHHHHHHHHHHHHHHHc----CCCEEEEecceeccC
Confidence            999999999999987642    456777777654443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.71  E-value=1.4e-08  Score=76.72  Aligned_cols=130  Identities=14%  Similarity=-0.011  Sum_probs=84.8

Q ss_pred             cccccccccceeccCCCCC---C---------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT---K---------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---~---------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|..+.+....   .         ..++.++.+|++                ++|+|||+|+......... 
T Consensus        25 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------~~d~vi~~a~~~~~~~~~~-   87 (321)
T 3vps_A           25 RALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------DVRLVYHLASHKSVPRSFK-   87 (321)
T ss_dssp             HHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------TEEEEEECCCCCCHHHHTT-
T ss_pred             HHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------cCCEEEECCccCChHHHHh-
Confidence            4567788888888754431   1         123444455544                5899999999764321111 


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHh
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~  140 (182)
                         +....++ |+.++.++++++...    +..+||++||...+...           .+...|+.+|.+.+.+++.++.
T Consensus        88 ---~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  159 (321)
T 3vps_A           88 ---QPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQR  159 (321)
T ss_dssp             ---STTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             ---CHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence               1123455 999999999988543    35799999997754321           2357899999999999999998


Q ss_pred             hhCCCccceeeeCCCccccc
Q psy5462         141 FSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       141 e~~~~~~~i~v~~~~~~~~~  160 (182)
                      +.+.  .++.+..|.....+
T Consensus       160 ~~~~--~~~~ilRp~~v~G~  177 (321)
T 3vps_A          160 ASVA--PEVGIVRFFNVYGP  177 (321)
T ss_dssp             SSSS--CEEEEEEECEEECT
T ss_pred             HcCC--CceEEEEeccccCc
Confidence            7431  15566666654443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.70  E-value=8.8e-08  Score=73.79  Aligned_cols=120  Identities=13%  Similarity=0.031  Sum_probs=80.6

Q ss_pred             cccccccccceeccCCCCCC-------CceeEEEEcc-CCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-------THVAVYFKAD-VSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-------~~~~~~~~~D-~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      +.|.++|+.|..+.+.....       ..++.++.+| ++|++++.++++      .+|++|||++....          
T Consensus        23 ~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~------~~d~Vi~~a~~~~~----------   86 (352)
T 1xgk_A           23 RVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE------GAHLAFINTTSQAG----------   86 (352)
T ss_dssp             HHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT------TCSEEEECCCSTTS----------
T ss_pred             HHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh------cCCEEEEcCCCCCc----------
Confidence            35667788888877554321       1368889999 999999887765      47999999875320          


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccc-cccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIA-ALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                           ..|..+ .++++++    ++.+ .++||++||.. +..+.+....|+.+|++.+.+++.+       ..++++..
T Consensus        87 -----~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~-------gi~~~ivr  149 (352)
T 1xgk_A           87 -----DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL-------GLPSTFVY  149 (352)
T ss_dssp             -----CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTS-------SSCEEEEE
T ss_pred             -----HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHc-------CCCEEEEe
Confidence                 124444 5555544    4445 57999999986 3344455678999999999998763       23455555


Q ss_pred             CCc
Q psy5462         154 PLR  156 (182)
Q Consensus       154 ~~~  156 (182)
                      |++
T Consensus       150 pg~  152 (352)
T 1xgk_A          150 AGI  152 (352)
T ss_dssp             ECE
T ss_pred             cce
Confidence            554

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=98.68  E-value=5.7e-08  Score=72.25  Aligned_cols=119  Identities=10%  Similarity=-0.061  Sum_probs=78.8

Q ss_pred             cccccc--cccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGH--IHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~--g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++  |+.|..+.+.....    ..++.++.+|++|++++.++++      .+|++||+|+...             
T Consensus        17 ~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------~~d~vi~~a~~~~-------------   77 (286)
T 2zcu_A           17 ESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQ------GVEKLLLISSSEV-------------   77 (286)
T ss_dssp             HHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTT------TCSEEEECC-----------------
T ss_pred             HHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHh------CCCEEEEeCCCCc-------------
Confidence            356666  88888887654322    1357889999999998877654      4799999998521             


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                         ..|+.++.++++++.    +.+.++||++||...+ +  ....|+.+|.+.+.+++.       ...++.+..|++.
T Consensus        78 ---~~~~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~  140 (286)
T 2zcu_A           78 ---GQRAPQHRNVINAAK----AAGVKFIAYTSLLHAD-T--SPLGLADEHIETEKMLAD-------SGIVYTLLRNGWY  140 (286)
T ss_dssp             -------CHHHHHHHHHH----HHTCCEEEEEEETTTT-T--CCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCB
T ss_pred             ---hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCC-C--CcchhHHHHHHHHHHHHH-------cCCCeEEEeChHH
Confidence               025556666666654    3455799999998765 2  235899999999988864       1345666666543


Q ss_pred             c
Q psy5462         158 V  158 (182)
Q Consensus       158 ~  158 (182)
                      .
T Consensus       141 ~  141 (286)
T 2zcu_A          141 S  141 (286)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.61  E-value=7e-08  Score=74.60  Aligned_cols=107  Identities=15%  Similarity=0.039  Sum_probs=80.8

Q ss_pred             eEEEEccC-CCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-C
Q psy5462          27 AVYFKADV-SDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT-G  104 (182)
Q Consensus        27 ~~~~~~D~-s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~  104 (182)
                      +.++.+|. +|++++.++++.      +|++||+|+...+.        ++...+++|+.++.++++++.    +.+. .
T Consensus        26 ~~v~~~d~~~d~~~l~~~~~~------~d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~~~   87 (369)
T 3st7_A           26 HHIFEVHRQTKEEELESALLK------ADFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDILT----RNTKKP   87 (369)
T ss_dssp             CEEEECCTTCCHHHHHHHHHH------CSEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHHT----TCSSCC
T ss_pred             CEEEEECCCCCHHHHHHHhcc------CCEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHHH----HhCCCC
Confidence            35677888 999999998874      79999999976542        123356789999999998874    3333 3


Q ss_pred             eEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         105 HIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       105 ~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++|++||...+.    ...|+.+|.+.+.+++.++.+.+.   ++.+..|....
T Consensus        88 ~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~g~---~~~i~R~~~v~  134 (369)
T 3st7_A           88 AILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEYGN---TVYIYRWPNLF  134 (369)
T ss_dssp             EEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHHCC---CEEEEEECEEE
T ss_pred             eEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHhCC---CEEEEECCcee
Confidence            899999987653    578999999999999999988643   55555555433

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=98.58  E-value=1.1e-07  Score=71.32  Aligned_cols=127  Identities=11%  Similarity=-0.091  Sum_probs=81.1

Q ss_pred             ccccccc-ccceeccCCCCCC------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHI-HGILFIPWCLPTK------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g-~~v~~~~~~~~~~------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      ++|.++| +.|..+.+.....      ..++.++.+|++|++++.++++      .+|++||+++.....     .    
T Consensus        23 ~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~------~~d~vi~~a~~~~~~-----~----   87 (299)
T 2wm3_A           23 RTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN------GAYATFIVTNYWESC-----S----   87 (299)
T ss_dssp             HHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT------TCSEEEECCCHHHHT-----C----
T ss_pred             HHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh------cCCEEEEeCCCCccc-----c----
Confidence            3566677 8888777654321      2357889999999998887765      489999998753210     1    


Q ss_pred             HHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--ccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          77 ERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        77 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                         ...|+.+..++++++    ++.+.++||++|+.....  +......|+.+|.+++.+++..       ..++++..|
T Consensus        88 ---~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~-------gi~~~ilrp  153 (299)
T 2wm3_A           88 ---QEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDI-------GVPMTSVRL  153 (299)
T ss_dssp             ---HHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHH-------TCCEEEEEC
T ss_pred             ---chHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHC-------CCCEEEEee
Confidence               234445555555544    445567999966644322  1123578999999999888752       335566666


Q ss_pred             Ccccc
Q psy5462         155 LRSVT  159 (182)
Q Consensus       155 ~~~~~  159 (182)
                      ++..+
T Consensus       154 ~~~~~  158 (299)
T 2wm3_A          154 PCYFE  158 (299)
T ss_dssp             CEEGG
T ss_pred             cHHhh
Confidence            65443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.51  E-value=8e-07  Score=68.22  Aligned_cols=137  Identities=9%  Similarity=0.011  Sum_probs=87.6

Q ss_pred             ccccccc-----ccceeccCCCCCC---CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHI-----HGILFIPWCLPTK---THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g-----~~v~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|     +.|..+.+.....   ..++.++.+|++|++++.++++..   +++|++||+|+...         ++
T Consensus        19 ~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~d~vih~a~~~~---------~~   86 (364)
T 2v6g_A           19 EILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPL---TDVTHVFYVTWANR---------ST   86 (364)
T ss_dssp             HHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTC---TTCCEEEECCCCCC---------SS
T ss_pred             HHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcC---CCCCEEEECCCCCc---------ch
Confidence            4567778     8888877654332   357889999999999888776542   34999999999752         13


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE-------EEecccccccc--------------CCCchhhhhHHHHHHH
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIV-------CISSIAALTAA--------------VNVSAYFASKYGVTEN  134 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii-------~iss~~~~~~~--------------~~~~~y~~sKaa~~~~  134 (182)
                      ....+++|+.++.++++++.+..  .+..++|       ++||...+...              +....|.    +.+.+
T Consensus        87 ~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~  160 (364)
T 2v6g_A           87 EQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDI  160 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHH
Confidence            56688999999999999986531  1234666       67776543111              1133562    34555


Q ss_pred             HHHHHhhhCCCccceeeeCCCccccc
Q psy5462         135 HPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus       135 ~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ++.++.+.+  ..++.+..|.....+
T Consensus       161 ~~~~~~~~~--~~~~~ilRp~~v~G~  184 (364)
T 2v6g_A          161 MLEEVEKKE--GLTWSVHRPGNIFGF  184 (364)
T ss_dssp             HHHHHTTST--TCEEEEEEESSEECC
T ss_pred             HHHHhhcCC--CceEEEECCCceeCC
Confidence            555544321  146666666654443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.40  E-value=6.2e-07  Score=66.67  Aligned_cols=117  Identities=7%  Similarity=-0.106  Sum_probs=75.7

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..+.+.....    ..++.++.+|++|.+           +.++|+|||+|+.....     ..  .   
T Consensus        22 ~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----------~~~~d~vi~~a~~~~~~-----~~--~---   80 (286)
T 3ius_A           22 RALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----------LDGVTHLLISTAPDSGG-----DP--V---   80 (286)
T ss_dssp             HHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----------CTTCCEEEECCCCBTTB-----CH--H---
T ss_pred             HHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----------cCCCCEEEECCCccccc-----cH--H---
Confidence            45778899988887654321    256889999999932           25799999999875432     11  0   


Q ss_pred             HHHHhHHHHHHHHHHhHHHHh--CCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLE--NNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~--~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                                 .+.++..+++  .+..++|++||...+..           ..+...|+.+|.+.+.+++.+      ..
T Consensus        81 -----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~  143 (286)
T 3ius_A           81 -----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PN  143 (286)
T ss_dssp             -----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TT
T ss_pred             -----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cC
Confidence                       1223333343  34579999999765422           123457999999999998877      13


Q ss_pred             cceeeeCCCccc
Q psy5462         147 WGTTVTTPLRSV  158 (182)
Q Consensus       147 ~~i~v~~~~~~~  158 (182)
                      .++.+..|.+..
T Consensus       144 ~~~~ilRp~~v~  155 (286)
T 3ius_A          144 LPLHVFRLAGIY  155 (286)
T ss_dssp             CCEEEEEECEEE
T ss_pred             CCEEEEeccceE
Confidence            355555555443

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.31  E-value=3e-06  Score=68.47  Aligned_cols=134  Identities=8%  Similarity=-0.042  Sum_probs=86.1

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      +.|.++|+.|..+.+.....    ..+.+|+.+.         ..+ +.++|+|||+|+.....   ..+.+.....+++
T Consensus       165 ~~L~~~G~~V~~l~R~~~~~----~~v~~d~~~~---------~~~~l~~~D~Vih~A~~~~~~---~~~~~~~~~~~~~  228 (516)
T 3oh8_A          165 AQLQTGGHEVIQLVRKEPKP----GKRFWDPLNP---------ASDLLDGADVLVHLAGEPIFG---RFNDSHKEAIRES  228 (516)
T ss_dssp             HHHHHTTCEEEEEESSSCCT----TCEECCTTSC---------CTTTTTTCSEEEECCCC--------CCGGGHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCCCCc----cceeecccch---------hHHhcCCCCEEEECCCCcccc---ccchhHHHHHHHH
Confidence            45677888888887655432    2367787642         133 56799999999975433   2345567788999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-c----------cCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-A----------AVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~----------~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      |+.++.++++++.   ++.+.++||++||...+. .          ..+...|+.+|...+.+.+....    .+.++.+
T Consensus       229 Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~~~~----~gi~~~i  301 (516)
T 3oh8_A          229 RVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPASD----AGKRVAF  301 (516)
T ss_dssp             THHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHHHHH----TTCEEEE
T ss_pred             HHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHHHHHh----CCCCEEE
Confidence            9999999999753   334457999999976542 0          11345688888877766543322    2446677


Q ss_pred             eCCCccccc
Q psy5462         152 TTPLRSVTI  160 (182)
Q Consensus       152 ~~~~~~~~~  160 (182)
                      ..|++...+
T Consensus       302 lRp~~v~Gp  310 (516)
T 3oh8_A          302 IRTGVALSG  310 (516)
T ss_dssp             EEECEEEBT
T ss_pred             EEeeEEECC
Confidence            777655443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.25  E-value=6.7e-06  Score=62.84  Aligned_cols=118  Identities=10%  Similarity=0.057  Sum_probs=81.0

Q ss_pred             cccccccccceeccCCCCCC-----------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-----------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-----------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      +.|.++|+.+..+.+.....           ..++.++.+|++|.+++.++++..    ++|+|||+++..         
T Consensus        28 ~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----~~d~Vi~~a~~~---------   94 (346)
T 3i6i_A           28 TASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----EIDIVVSTVGGE---------   94 (346)
T ss_dssp             HHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT----TCCEEEECCCGG---------
T ss_pred             HHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC----CCCEEEECCchh---------
Confidence            35667788888887654211           256889999999999999988763    589999999872         


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccc----cccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAAL----TAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~----~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                                |+.+..++++++..    .+ -.++|+ |+....    .+.++...|+.+|.+.+.+.+..       ..
T Consensus        95 ----------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~-------g~  152 (346)
T 3i6i_A           95 ----------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEES-------GI  152 (346)
T ss_dssp             ----------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHT-------TC
T ss_pred             ----------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHHc-------CC
Confidence                      67777788877754    33 456665 443221    12245578999999988888751       33


Q ss_pred             ceeeeCCCc
Q psy5462         148 GTTVTTPLR  156 (182)
Q Consensus       148 ~i~v~~~~~  156 (182)
                      +.++..|++
T Consensus       153 ~~tivrpg~  161 (346)
T 3i6i_A          153 PFTYICCNS  161 (346)
T ss_dssp             CBEEEECCE
T ss_pred             CEEEEEecc
Confidence            555555553

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.19  E-value=5.4e-06  Score=61.66  Aligned_cols=122  Identities=11%  Similarity=-0.011  Sum_probs=73.4

Q ss_pred             cccc-cccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           6 TTGH-IHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         6 l~~~-g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      |.++ |+.|..+.+.....    ..++.++.+|++|++++.++++      ++|++||+|+.....              
T Consensus        20 L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~------~~d~vi~~a~~~~~~--------------   79 (289)
T 3e48_A           20 AIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFK------GMDTVVFIPSIIHPS--------------   79 (289)
T ss_dssp             HHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTT------TCSEEEECCCCCCSH--------------
T ss_pred             HhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHh------CCCEEEEeCCCCccc--------------
Confidence            5555 88888876544322    3578999999999998877765      489999999864321              


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccc
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTI  160 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~  160 (182)
                      ..|+.+..++++++    ++.+.++||++||......    ..|..++...  ..+....+   ...++++..|++....
T Consensus        80 ~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--~~e~~~~~---~g~~~~ilrp~~~~~~  146 (289)
T 3e48_A           80 FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN----NPFHMSPYFG--YASRLLST---SGIDYTYVRMAMYMDP  146 (289)
T ss_dssp             HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT----CCSTTHHHHH--HHHHHHHH---HCCEEEEEEECEESTT
T ss_pred             hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC----CCCccchhHH--HHHHHHHH---cCCCEEEEeccccccc
Confidence            12455555555554    5555679999999654322    2233333211  22222222   2446677777755443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.16  E-value=1.2e-05  Score=60.47  Aligned_cols=107  Identities=14%  Similarity=0.094  Sum_probs=70.2

Q ss_pred             cccccccccceeccCCCCC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      +.|.++|+.|..+.+....            ...++.++.+|++|++++.++++      ++|++||+++.....     
T Consensus        22 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~------~~d~vi~~a~~~~~~-----   90 (313)
T 1qyd_A           22 NASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------QVDVVISALAGGVLS-----   90 (313)
T ss_dssp             HHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------TCSEEEECCCCSSSS-----
T ss_pred             HHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh------CCCEEEECCccccch-----
Confidence            4567778888887765321            13468899999999998887765      489999999875432     


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccc------cCCCchhhhhHHHHHHHHHH
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTA------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~------~~~~~~y~~sKaa~~~~~~~  137 (182)
                                .|+.+..++++++    ++.+ -++||+ |+......      .+....| .+|.+++.+.+.
T Consensus        91 ----------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  147 (313)
T 1qyd_A           91 ----------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA  147 (313)
T ss_dssp             ----------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH
T ss_pred             ----------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHh
Confidence                      1455566666665    4444 567875 43221111      1335678 999999888763

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.07  E-value=1.4e-05  Score=59.91  Aligned_cols=102  Identities=14%  Similarity=0.139  Sum_probs=65.3

Q ss_pred             cccccccccceeccCCC-CC-------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHGILFIPWCL-PT-------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-~~-------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+.+..+.+.. ..             ...++.++.+|++|++++.++++      .+|++||+++...     
T Consensus        20 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~a~~~~-----   88 (307)
T 2gas_A           20 WASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK------QVDIVICAAGRLL-----   88 (307)
T ss_dssp             HHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------TCSEEEECSSSSC-----
T ss_pred             HHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh------CCCEEEECCcccc-----
Confidence            45667788888776553 10             02357899999999998877765      4899999998642     


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccc------ccCCCchhhhhHHHHHHHHHH
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALT------AAVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~------~~~~~~~y~~sKaa~~~~~~~  137 (182)
                                    +.+..++++++    ++.+ -.++|.  |..+..      +.|....| .+|.+++.+++.
T Consensus        89 --------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  142 (307)
T 2gas_A           89 --------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA  142 (307)
T ss_dssp             --------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred             --------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCcchhHH-HHHHHHHHHHHH
Confidence                          22344455554    3444 467763  333311      12224578 999999888764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.03  E-value=5e-06  Score=56.67  Aligned_cols=59  Identities=10%  Similarity=0.058  Sum_probs=46.2

Q ss_pred             cccccccccceeccCCCC-------------CCCceeEEEEccCCCH--HHHHHHHHHHHh-cCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-------------TKTHVAVYFKADVSDK--AEIKKLNENVRK-IGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------------~~~~~~~~~~~D~s~~--~~~~~~~~~~~~-~~~id~li~~ag~~   63 (182)
                      ++|.+.|+.+.+......             ..|.++..+++|++++  ++++++++.+.+ +|+ |+||||||..
T Consensus        34 ~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           34 SLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence            356677888876532111             1356788899999999  999999999998 999 9999999863

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.03  E-value=1e-05  Score=60.57  Aligned_cols=103  Identities=15%  Similarity=0.165  Sum_probs=66.0

Q ss_pred             cccccccccceeccCCCCCC-------------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-------------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-------------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      +.|.++|+.+..+.+.....             ..++.++.+|++|++++.++++      ++|++||+++...      
T Consensus        22 ~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~------~~d~vi~~a~~~~------   89 (308)
T 1qyc_A           22 KASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------NVDVVISTVGSLQ------   89 (308)
T ss_dssp             HHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------TCSEEEECCCGGG------
T ss_pred             HHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc------CCCEEEECCcchh------
Confidence            45677888888877653211             3468899999999999888776      3799999998632      


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccc----c-cCCCchhhhhHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALT----A-AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~----~-~~~~~~y~~sKaa~~~~~~~  137 (182)
                                   +.+..++++++    ++.+ -++||+ |+.....    + .+....| .+|.+++.+.+.
T Consensus        90 -------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  143 (308)
T 1qyc_A           90 -------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA  143 (308)
T ss_dssp             -------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH
T ss_pred             -------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHh
Confidence                         22334444444    3444 467763 4332111    1 1223578 999999888775

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.94  E-value=1.1e-05  Score=60.92  Aligned_cols=102  Identities=11%  Similarity=0.110  Sum_probs=65.0

Q ss_pred             cccccccccceeccCCCCCC--------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK--------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~--------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+.+.....        ..++.++.+|++|++++.++++      .+|+|||+++...           
T Consensus        29 ~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~------~~d~vi~~a~~~~-----------   91 (318)
T 2r6j_A           29 KGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK------KVDVVISALAFPQ-----------   91 (318)
T ss_dssp             HHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------TCSEEEECCCGGG-----------
T ss_pred             HHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc------CCCEEEECCchhh-----------
Confidence            45677788888877654311        2357899999999998887765      4899999998632           


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccc------cCCCchhhhhHHHHHHHHHH
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTA------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~------~~~~~~y~~sKaa~~~~~~~  137 (182)
                              +.+..++++++    ++.+ .++||+ |+ .+...      .+....| .+|.+++.+.+.
T Consensus        92 --------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  145 (318)
T 2r6j_A           92 --------ILDQFKILEAI----KVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ERKRMIRRAIEE  145 (318)
T ss_dssp             --------STTHHHHHHHH----HHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             --------hHHHHHHHHHH----HhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HHHHHHHHHHHh
Confidence                    22333444444    4444 467764 43 22111      1113468 999998888764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.87  E-value=1.1e-05  Score=60.95  Aligned_cols=102  Identities=12%  Similarity=0.122  Sum_probs=65.9

Q ss_pred             cccccccccceeccCCC-CC------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCL-PT------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-~~------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~   70 (182)
                      +.|.++|+.|..+.+.. ..            ...++.++.+|++|++++.++++      .+|++||+++...      
T Consensus        22 ~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~------~~d~vi~~a~~~~------   89 (321)
T 3c1o_A           22 RASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK------QVDIVISALPFPM------   89 (321)
T ss_dssp             HHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT------TCSEEEECCCGGG------
T ss_pred             HHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc------CCCEEEECCCccc------
Confidence            45677888888887654 11            12468899999999998887765      3899999998642      


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccc------cCCCchhhhhHHHHHHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTA------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~------~~~~~~y~~sKaa~~~~~~~  137 (182)
                                   +.+..++++++    ++.+ -++||.  |..+...      .+....| .+|.+++.+++.
T Consensus        90 -------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~  143 (321)
T 3c1o_A           90 -------------ISSQIHIINAI----KAAGNIKRFLP--SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA  143 (321)
T ss_dssp             -------------SGGGHHHHHHH----HHHCCCCEEEC--SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH
T ss_pred             -------------hhhHHHHHHHH----HHhCCccEEec--cccccCccccccCCCcchHH-HHHHHHHHHHHH
Confidence                         22334444444    4444 467762  3333111      1124578 999999988874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=96.96  E-value=0.023  Score=42.10  Aligned_cols=94  Identities=11%  Similarity=0.069  Sum_probs=60.2

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++||+|..+.+...  ...   +..|     .      ...+ +..+|.+||.|+..........+.......++.
T Consensus        18 ~~L~~~G~~V~~l~R~~~--~~~---~~~~-----~------~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~   81 (298)
T 4b4o_A           18 QLLNARGHEVTLVSRKPG--PGR---ITWD-----E------LAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGS   81 (298)
T ss_dssp             HHHHHTTCEEEEEESSCC--TTE---EEHH-----H------HHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCCC--cCe---eecc-----h------hhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhH
Confidence            567888999998876432  121   1221     1      1123 567999999998654444444567777888899


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAAL  115 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~  115 (182)
                      |+.++.++.+++...  +.+...+|+.||...+
T Consensus        82 ~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vy  112 (298)
T 4b4o_A           82 RLETTQLLAKAITKA--PQPPKAWVLVTGVAYY  112 (298)
T ss_dssp             HHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGS
T ss_pred             HHHHHHHHHHHHHHh--CCCceEEEEEeeeeee
Confidence            999998888876432  2234557777776544

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=96.73  E-value=0.0069  Score=45.88  Aligned_cols=87  Identities=7%  Similarity=-0.013  Sum_probs=61.1

Q ss_pred             cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc--------cc-ccCC
Q psy5462          50 IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA--------LT-AAVN  120 (182)
Q Consensus        50 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~--------~~-~~~~  120 (182)
                      +.+.|++||.||.....   ..+.   ...+++|+.++..+++++..+-  ....+++++|+...        .. +.++
T Consensus        78 ~~~~D~Vih~Ag~~~~~---~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~~~~p  149 (327)
T 1y7t_A           78 FKDADYALLVGAAPRKA---GMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAPGLNP  149 (327)
T ss_dssp             TTTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCG
T ss_pred             hCCCCEEEECCCcCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcCCCCh
Confidence            34689999999975421   1233   4568999999999999886531  12357888877541        11 2345


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         121 VSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       121 ~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ...|+.+|...+.+...++..++-
T Consensus       150 ~~~yg~tkl~~er~~~~~a~~~g~  173 (327)
T 1y7t_A          150 RNFTAMTRLDHNRAKAQLAKKTGT  173 (327)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             hheeccchHHHHHHHHHHHHHhCc
Confidence            567999999999999888887664

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.30  E-value=0.013  Score=42.13  Aligned_cols=59  Identities=12%  Similarity=0.135  Sum_probs=38.6

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~   67 (182)
                      +.+.++|+.|..+...... ....  .-.+|+++.++   +++.+.+ ++++|++|+|||.....+
T Consensus        42 ~~~~~~Ga~V~l~~~~~~l~~~~g--~~~~dv~~~~~---~~~~v~~~~~~~Dili~~Aav~d~~p  102 (226)
T 1u7z_A           42 AAAARRGANVTLVSGPVSLPTPPF--VKRVDVMTALE---MEAAVNASVQQQNIFIGCAAVADYRA  102 (226)
T ss_dssp             HHHHHTTCEEEEEECSCCCCCCTT--EEEEECCSHHH---HHHHHHHHGGGCSEEEECCBCCSEEE
T ss_pred             HHHHHCCCEEEEEECCcccccCCC--CeEEccCcHHH---HHHHHHHhcCCCCEEEECCcccCCCC
Confidence            4677889999887543211 1111  23568877544   5566667 899999999999865433

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=94.70  E-value=0.025  Score=40.75  Aligned_cols=68  Identities=12%  Similarity=0.097  Sum_probs=43.5

Q ss_pred             cccccccccceeccCCCCCC---CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEI   76 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~   76 (182)
                      +.+.++|+.|..+.......   ...+..  .|+.   ++.++++.+.+ ++++|++|+||+.....+....+.+++
T Consensus        37 ~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~--~~v~---s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~  108 (232)
T 2gk4_A           37 ETLLSAGYEVCLITTKRALKPEPHPNLSI--REIT---NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEV  108 (232)
T ss_dssp             HHHHHTTCEEEEEECTTSCCCCCCTTEEE--EECC---SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHH
T ss_pred             HHHHHCCCEEEEEeCCccccccCCCCeEE--EEHh---HHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhh
Confidence            46778899999887543211   122332  3443   56666777777 889999999999876555443344443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=88.28  E-value=0.73  Score=35.87  Aligned_cols=34  Identities=21%  Similarity=0.068  Sum_probs=29.7

Q ss_pred             ceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccC
Q psy5462          25 HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGI   62 (182)
Q Consensus        25 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~   62 (182)
                      .++..+.+|++|.+++.++++..    ++|+||||++.
T Consensus        53 ~~~~~~~~D~~d~~~l~~~l~~~----~~DvVin~ag~   86 (405)
T 4ina_A           53 GEIDITTVDADSIEELVALINEV----KPQIVLNIALP   86 (405)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHH----CCSEEEECSCG
T ss_pred             CceEEEEecCCCHHHHHHHHHhh----CCCEEEECCCc
Confidence            36888999999999999998876    58999999875

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=82.49  E-value=0.6  Score=34.40  Aligned_cols=53  Identities=11%  Similarity=0.036  Sum_probs=34.8

Q ss_pred             ccccccccceeccCCCCCC---------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC
Q psy5462           5 RTTGHIHGILFIPWCLPTK---------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV   63 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~~~~---------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~   63 (182)
                      .|.++|+.+.++.+.....         ..++.++.+|+++++++.++++      .+|++|||+|..
T Consensus       138 ~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~DvlVn~ag~g  199 (287)
T 1lu9_A          138 LLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK------GAHFVFTAGAIG  199 (287)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT------TCSEEEECCCTT
T ss_pred             HHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH------hCCEEEECCCcc
Confidence            4556677766555432100         0235678899999988776654      479999999864

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=81.75  E-value=9.2  Score=28.68  Aligned_cols=87  Identities=6%  Similarity=-0.028  Sum_probs=55.4

Q ss_pred             cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc--------cc-ccCC
Q psy5462          50 IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA--------LT-AAVN  120 (182)
Q Consensus        50 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~--------~~-~~~~  120 (182)
                      +...|++||.||.....   ..+.+   ..+..|+.....+++.+..+-  ...++||++|....        .. +.|.
T Consensus        81 l~~aD~Vi~~ag~~~~~---g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~~~~p~  152 (329)
T 1b8p_A           81 FKDADVALLVGARPRGP---GMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSAPSLPA  152 (329)
T ss_dssp             TTTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCTTSCG
T ss_pred             hCCCCEEEEeCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHcCCCCH
Confidence            45689999999975421   12333   357888888888888876531  13568999987331        11 3334


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         121 VSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       121 ~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ...|+.++.--..+...++..++.
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv  176 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGK  176 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTC
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCc
Confidence            446888766556667777777764

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=81.06  E-value=1.2  Score=35.28  Aligned_cols=53  Identities=15%  Similarity=0.045  Sum_probs=34.4

Q ss_pred             ccccccccceeccCCC------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC
Q psy5462           5 RTTGHIHGILFIPWCL------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV   63 (182)
Q Consensus         5 ~l~~~g~~v~~~~~~~------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~   63 (182)
                      .|.+.|+.+.+.++..      ...-..+..+.+|++|.+++.++++      ++|++||+++..
T Consensus        21 ~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~------~~DvVIn~a~~~   79 (450)
T 1ff9_A           21 VLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA------KHDLVISLIPYT   79 (450)
T ss_dssp             HHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT------TSSEEEECCC--
T ss_pred             HHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc------CCcEEEECCccc
Confidence            3455677766554321      1112246788999999988776654      589999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	182
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-24
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-22
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-22
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-21
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-20
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-18
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	6e-18
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	2e-17
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-16
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-16
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-16
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-16
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-16
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	5e-16
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-15
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-15
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	4e-15
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-14
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-14
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-14
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-13
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-13
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-13
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-12
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-12
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-11
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-11
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	7e-11
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-10
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-10
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-10
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-10
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-10
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-10
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	5e-10
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	9e-10
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-09
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-09
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-09
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-09
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-09
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-08
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-08
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	1e-07
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-07
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-07
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-07
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-06
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-06
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-06
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-06
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-06
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	7e-06
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	9e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-05
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-05
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-05
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-04

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 91.8 bits (228), Expect = 7e-24
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             +F+ D+ D+ E  +   E    +G VD+L+NNA I A  S L     E  R+++VNL 
Sbjct: 50  GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT 109

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + + +      +M +   G IV ++S+  L A    +AY ASK G+
Sbjct: 110 APMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGL 155

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 3e-22
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            + ++ D+S++ +I  +   +R +   VDI INNAG+    ++L+ +    + + +VN++
Sbjct: 63  LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVL 122

Query: 86  SNIKMVREFLPDMLENNT--GHIVCISSIAALTAA--VNVSAYFASKYGV 131
           +     RE    M E N   GHI+ I+S++            Y A+KY V
Sbjct: 123 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAV 172

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 7e-22
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNE-NVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              F  D S++ +I    +    +IG V IL+NNAG+V +S + A  D +IE+  +VN++
Sbjct: 58  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVL 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++    + FLP M +NN GHIV ++S A   +   + AY +SK+  
Sbjct: 118 AHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA 163

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.4 bits (211), Expect = 5e-21
 Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 2/119 (1%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI 79
           +  +   AV     V    ++  +   +   G +D+++NNAGI+   S    +D + + I
Sbjct: 60  IRRRGGKAVANYDSVEAGEKL--VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDII 117

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
             V+L  + ++ R     M + N G I+  +S + +      + Y A+K G+     ++
Sbjct: 118 QRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTL 176

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 81.9 bits (202), Expect = 5e-20
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  K DVS   +++    + +   G  DIL+NNAGI         T  + ++  ++N+ 
Sbjct: 54  VLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVD 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK 128
           S   M + F+P M  N  G I+ ++S          + Y ++K
Sbjct: 114 SGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTK 156

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 76.6 bits (188), Expect = 6e-18
 Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIE 77
              K         D S + E +KL + V  +  G +DILINN G + S   L +T  +  
Sbjct: 52  WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 111

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             +  NL S   + +   P +  +  G+I+ +SSIA + +A   S Y A+K  +
Sbjct: 112 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 165

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
             +F+ D SD+    KL +   K  G V  L+NNAGI  + SV   T  E  +++ VNL 
Sbjct: 56  IQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLD 115

Query: 86  SNIKMVREFLPDMLENNTG-HIVCISSIAALTAAVNVSAYFASKYGV 131
                 R  +  M     G  I+ +SSI       ++ AY ASK  V
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 75.4 bits (185), Expect = 2e-17
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSS----VLAHTDHEIERIMD 81
                ADV+  A   ++ +  + K G +DIL+NNAG     S      A +    +  ++
Sbjct: 59  VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLN 118

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           +NL S I + ++ +P +       +   S  + L A  +   Y  +K  + 
Sbjct: 119 LNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAID 169

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 73.1 bits (179), Expect = 1e-16
 Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +++ + DVS +A+   +   V R++G +++L+NNAGI+    +      +  R++ +N  
Sbjct: 54  SMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S     ++ +  M E   G I+ ++S+++       + Y ASK  V
Sbjct: 114 SVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAV 158

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 73.1 bits (179), Expect = 1e-16
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIE 77
             +K         D+S ++E ++L   V     G ++IL+NNAGIV       +T  +  
Sbjct: 52  WRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYS 111

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            IM +N  +   +     P +  +  G++V ISS++   A    + Y A+K  +
Sbjct: 112 LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAM 165

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 1e-16
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIER 78
           L  +     + + D+ D   I+ L + +RK  G +D+L+NNAGI    +       + E 
Sbjct: 48  LQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEV 107

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            M  N      +  E LP +     G +V +SSI ++ A  + S     K+  
Sbjct: 108 TMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRS 158

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.3 bits (177), Expect = 2e-16
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 D+ D    +K    +  IG VD+L+NNA +V     L  T    +R   VNL S
Sbjct: 52  IEPVCVDLGDWDATEKA---LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRS 108

Query: 87  NIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
             ++ +    DM+     G IV +SS+ A     N+  Y ++K  +T
Sbjct: 109 VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT 155

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 72.8 bits (178), Expect = 2e-16
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH-----TDHEIERIM 80
            +    DV    + K+  +  V + G +D LI NAGI   S+ L        D   + + 
Sbjct: 53  VLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVF 112

Query: 81  DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +N+   I  V+  LP ++ +  G+++   S A          Y A+K+ + 
Sbjct: 113 HINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIV 163

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 5e-16
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 12/110 (10%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            ++ + DV+D+ +++     V    G +DIL+NNAG+        + +   E+ + +NL+
Sbjct: 56  TLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV--------NNEKNWEKTLQINLV 107

Query: 86  SNIKMVREFLPDMLENNTGH---IVCISSIAALTAAVNVSAYFASKYGVT 132
           S I      L  M + N G    I+ +SS+A L        Y ASK+G+ 
Sbjct: 108 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIV 157

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 70.4 bits (172), Expect = 1e-15
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y   DV+ + + +++      + G VD L+NNAGI     +   +     +++++NL 
Sbjct: 53  ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                ++  +P M +   G IV ISS A L      S+Y ASK+GV
Sbjct: 113 GVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGV 158

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 1e-15
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTD-HEIERIMDVNL 84
           AV+   DV+ + ++K L     +    +D ++NNAG          T      +++++NL
Sbjct: 53  AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNL 112

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +    + +  LP + ++  G+++ ISS+           Y A+K  V
Sbjct: 113 LGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAV 158

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 68.6 bits (167), Expect = 4e-15
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                AD+SD A++++L  ++  + G++D L+NNAG+    ++   T+ + +  M+ NL 
Sbjct: 59  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 118

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + +     M   ++GHI  I+S+AA  A  + S Y  SK+G 
Sbjct: 119 GTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQ 164

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 67.3 bits (164), Expect = 1e-14
 Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHE----IERIMD 81
                ADV+ +    ++ N  +++ G +D+L+NNAG     +       +      + + 
Sbjct: 59  VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 118

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +NL + I+M ++  P ++ +    +   S +A   A  +   Y  +K  +
Sbjct: 119 LNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAAL 168

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 27  AVYFKADVS-DKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNL 84
             +   DV+   AE KKL + +  ++  VDILIN AGI          DH+IER + +N 
Sbjct: 57  ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI--------LDDHQIERTIAINF 108

Query: 85  MSNIKMVREFLPDMLENNT---GHIVCISSIAALTAAVNVSAYFASKYGV 131
              +      L    +      G I  I S+    A   V  Y ASK  V
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAV 158

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 65.9 bits (160), Expect = 4e-14
 Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+ F  DVS +A+++ + +      G +D+++NNAGI   + ++     + + ++D+NL 
Sbjct: 53  AITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSI 138
                 +     M++   G I+ I+S+  L   +  + Y A+K GV     + 
Sbjct: 113 GVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTA 165

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 2e-13
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMS 86
                 D+ D    ++    +  +G VD+L+NNA +      L  T    +R  +VNL +
Sbjct: 54  IEPVCVDLGDWEATERA---LGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRA 110

Query: 87  NIKMVREFLPDMLENNTGH-IVCISSIAALTAAVNVSAYFASKYGV 131
            I++ +     ++       IV +SS  +  A  N S Y ++K  +
Sbjct: 111 VIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGAL 156

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 63.9 bits (155), Expect = 3e-13
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 25  HVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNA--GIVASSSVLAHTDHEIERIMD 81
            V  +   DV+   +++ L +  + K G +DI+  N         S+L   + + +R+MD
Sbjct: 54  DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 113

Query: 82  VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSA-YFASKYGVTENHPSI 138
           +N+     + +     M+    G IV  +SI++ TA   VS  Y A+K+ V     S+
Sbjct: 114 INVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSL 171

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 7e-13
 Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 1/102 (0%)

Query: 31  KADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKM 90
           +  V D  + K++++   ++  +D+L N AG V   +VL   + + +  M++N+ S   M
Sbjct: 53  QTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 91  VREFLPDMLENNTGHIVCISSIAALTAAVNV-SAYFASKYGV 131
           ++ FLP ML   +G+I+ +SS+A+    V     Y  +K  V
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.6 bits (149), Expect = 2e-12
 Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           +  +  DVS K EI ++   +  +   VDIL+NNAGI   +  L   + E E ++  NL 
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLN 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S   + +     M+ N  G I+ ISSI  LT  V  + Y +SK GV
Sbjct: 121 SLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 166

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 60.1 bits (145), Expect = 6e-12
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKI--GYVDILINNAGIVASSSVLAHTDHEIE 77
              K         D+  + E  KL + V  +  G ++IL+NNAG+V        T+ +  
Sbjct: 50  WREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYN 109

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
            IM  N  +   + +   P +  +  G+++ +SSIA  +A  +VS Y ASK  +
Sbjct: 110 IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 163

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 59.3 bits (143), Expect = 1e-11
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV+D A +++        +G +D +++ AGI   +        + E ++ VNL 
Sbjct: 51  AHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLT 110

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +  + +     M E N G IV  +S   L   +  + Y AS  GV 
Sbjct: 111 GSFLVAKAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVV 156

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 59.0 bits (142), Expect = 1e-11
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNEN-VRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
                 +V+D A I+ + E    + G VDIL+NNAGI   + ++   D E   I++ NL 
Sbjct: 52  GKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLS 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           S  ++ +  +  M++   G I+ I S+         + Y A+K G+
Sbjct: 112 SVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGL 157

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 57.1 bits (137), Expect = 7e-11
 Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            V  +AD+S  +E+  L +      G +D +++N+G+      L  T    +++ ++N  
Sbjct: 58  GVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTR 117

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + ++ L          +    + A +T   N + Y  SK  V
Sbjct: 118 GQFFVAQQGLKHCRRGGRIILTSSIA-AVMTGIPNHALYAGSKAAV 162

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA----HTDHEIERIMDV 82
            +Y + DV+ + ++++     ++   +  +++ AG+  +  +L     H      R+++V
Sbjct: 40  LIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEV 99

Query: 83  NLMSNIKMVREFLP------DMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
           NL+    ++R             E   G IV  +S+AA    +  +AY ASK G
Sbjct: 100 NLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGG 153

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 2/114 (1%)

Query: 19  CLPTKTHVAVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIE 77
           CL      A Y    + D    ++   +  + +G +D+LI N     S ++     H + 
Sbjct: 58  CLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVR 117

Query: 78  RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + M+VN +S + +    LP + ++N G IV +SS+A   A   V+AY ASK+ +
Sbjct: 118 KSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFAL 170

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 1/106 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKIGY-VDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
               + DV+D   + +    V +    V++L++NAG+ A + ++  T+ + E++++ NL 
Sbjct: 47  LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLT 106

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ +     M  N  G ++ I S++ L    N + Y ASK GV
Sbjct: 107 GAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGV 152

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIV-ASSSVLAHTDHEIERIMDVNL 84
            +   ADVSD+A+++        + G +D   NNAGI    +   + T  E ++++ +NL
Sbjct: 57  VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 116

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
                 + + L  M E  +G +V  +S+  +    N S Y A+K+GV
Sbjct: 117 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 163

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.4 bits (133), Expect = 3e-10
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 3/109 (2%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAH--TDHEIERIMDVN 83
                ADV++ +    + N  + K G +DIL+NNAG   +             ++   +N
Sbjct: 58  INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLN 117

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
             + I+M ++    +++     +   S +A   A      Y  +K  + 
Sbjct: 118 FQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALD 166

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 55.1 bits (132), Expect = 4e-10
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
              ++ DVS+   + K  + +   +G +  LI NAG+         T  +   + DVN+ 
Sbjct: 61  TKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVF 120

Query: 86  SNIKMVREFLPDMLENNTGHIV--------CISSIAALTAAVNVSAYFASKYG 130
                 R      L+      +         I + ++L  ++    Y +SK  
Sbjct: 121 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAA 173

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 54.7 bits (131), Expect = 5e-10
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            + F+ DVS+  E+KKL E V+ K G +D ++N AGI            E  ++++VNL 
Sbjct: 57  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYF-ASKYG 130
               + RE    + E++   I+ I S+      +   + + ASK G
Sbjct: 117 GTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 53.9 bits (129), Expect = 9e-10
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 2/105 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVAS-SSVLAHTDHEIERIMDVNL 84
             Y +     + E  +L        G VD+L++N         +  +   +    ++   
Sbjct: 45  ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQ 104

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKY 129
           +    +V      M +  +GHI+ I+S         +S Y +++ 
Sbjct: 105 IRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARA 149

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A Y   DV+  A+ K   +      G + +L+NNAGI+   ++  +   E +RI+DVNL 
Sbjct: 54  ARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT 113

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
                +R  +  M E   G I+ ISSI  L   V    Y A+K+ V 
Sbjct: 114 GVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVR 160

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 22/126 (17%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI---GYVDILINNAGIVASSSVLAHTDHE-IERIMDV 82
                  V+    +      V +I     + +LINNAG++ S       +   I   +DV
Sbjct: 53  VHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112

Query: 83  NLMSNIKMVREFLPDMLENNTGHIVCISSI------------------AALTAAVNVSAY 124
           N  S + + ++ LP +    +       S+                   + +A   V AY
Sbjct: 113 NTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAY 172

Query: 125 FASKYG 130
             SK  
Sbjct: 173 RMSKAA 178

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 1/112 (0%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI 79
           L          + DV D   +    E V +     ++ N    +         D     +
Sbjct: 52  LACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVA-SV 110

Query: 80  MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           +DVN++  ++M++ FLPDM    +G ++   S+  L        Y ASK+ +
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFAL 162

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 29  YFKADVSDKAEIKKL-NENVRKIGYVDILINNA----GIVASSSVLAHTDHEIERIMDVN 83
            F+ADV+   E+  L        G +D L++              +     +    ++V+
Sbjct: 62  LFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
             S + + R   P + E   G IV ++  A+       +    +K  +
Sbjct: 122 AYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNVMAIAKAAL 167

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 6e-09
 Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +  + ++ ++ E+  L ++     G ++ L+NN G    S     +      +++ NL 
Sbjct: 68  VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 127

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               M +      ++ + G IV I  +             A++ GV
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGV 172

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 2/108 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE-IERIMDVNL 84
           A  +  DV+ +  +    ++V +  G +D L NNAG   + + +     +   R++ +N+
Sbjct: 56  ARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 115

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
                +++     M+  N G IV  +S+A +    N++AY  SK  + 
Sbjct: 116 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII 163

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 49.0 bits (116), Expect = 5e-08
 Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 1/105 (0%)

Query: 27  AVYFKADVSDKAEIKKLNENV-RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
            +Y  AD+S    ++ L +N  R++G +DIL+NNAGI  ++ +      + + I+ +NL 
Sbjct: 57  VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYG 130
           +        LP M +   G I+ I+S   L A+ N SAY A+K+G
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG 161

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 47.8 bits (113), Expect = 1e-07
 Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-GYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   KA+V    +I ++ E   KI G +DI+ +N+G+V+   V   T  E +R+  +N  
Sbjct: 70  AACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTR 129

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
               + RE    +       ++   +     A    + Y  SK  +
Sbjct: 130 GQFFVAREAYKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAI 174

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 47.4 bits (112), Expect = 2e-07
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 3/108 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV    EI+ L   V  + G VD+L+NNAG     +     D     +++ NL 
Sbjct: 53  ADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLT 112

Query: 86  SNIKMVREFLP--DMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
              ++ ++ L    MLE  TG IV I+S       V+ + Y ASK+GV
Sbjct: 113 GVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV 160

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 47.0 bits (111), Expect = 3e-07
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A   + D++ + E+  L +    K+G VDIL+NNAG             +  R  ++N+ 
Sbjct: 62  AFACRCDITSEQELSALADFAISKLGKVDILVNNAGG-GGPKPFDMPMADFRRAYELNVF 120

Query: 86  SNIKMVREFLPDMLENNTGHIVCISS 111
           S   + +   P+M +N  G I+ I+S
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITS 146

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.8 bits (108), Expect = 5e-07
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 29  YFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNI 88
           Y   D+    +         K+  VDIL+ NAG   +      T+ + +  +D   ++ I
Sbjct: 48  YVVCDLRKDLD-----LLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMI 102

Query: 89  KMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
           K+VR +LP M E   G IV I+S + ++   N+    +++  +T
Sbjct: 103 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALT 146

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 45.3 bits (106), Expect = 1e-06
 Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 37/146 (25%)

Query: 32  ADVSDKAEIKKLNENV--RKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIK 89
           AD+S     K+   +V  +    +D L+  AG+             +  ++ VN     +
Sbjct: 40  ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGL-------GPQTKVLGNVVSVNYFGATE 92

Query: 90  MVREFLPD---------------------------MLENNTGHIVCISSIAALTAAVNVS 122
           ++  FLP                             L    G      +I         +
Sbjct: 93  LMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN 152

Query: 123 -AYFASKYGVTENHPSIKCFSGYMLW 147
            AY  SK  +T          G    
Sbjct: 153 LAYAGSKNALTVAVRKRAAAWGEAGV 178

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 44.5 bits (104), Expect = 1e-06
 Identities = 2/83 (2%), Positives = 17/83 (20%), Gaps = 6/83 (7%)

Query: 50  IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLE-NNTGHIVC 108
           +     +     I     +        +    + ++++           ++  + G    
Sbjct: 90  VKGAHFVFTAGAI----GLELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYG 145

Query: 109 ISSIAALTAAVNVSAYFASKYGV 131
                       +      +  +
Sbjct: 146 GKRAFGALGIGGL-KLKLHRACI 167

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 2/108 (1%)

Query: 27  AVYFKADVSDKAEIKKL-NENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDV-NL 84
               + DV D   ++   +E ++  G+ +I+INNA     S     + +  + I D+   
Sbjct: 77  VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLN 136

Query: 85  MSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +    +      +        + I++I A T +  V    ++K GV 
Sbjct: 137 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 184

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 10/115 (8%)

Query: 27  AVYFKADVSDKAEIKKLNENVRKI-----GYVDILINNA---GIVASSSVLAHTDHEIER 78
            V   AD+  +A +++L   VR++         +LINNA   G V+   +  +   E+  
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVC--ISSIAALTAAVNVSAYFASKYGV 131
              +NL S + +    L    ++         ISS+ AL        Y A K   
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAAR 176

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 12/108 (11%), Positives = 31/108 (28%), Gaps = 3/108 (2%)

Query: 25  HVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLA-HTDHEIERIMDVN 83
            +     +      ++      +     VD ++  AG  A  +  +       + +   +
Sbjct: 44  VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQS 103

Query: 84  LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           + ++                G +    + AAL     +  Y  +K  V
Sbjct: 104 IWTSTISSHLA--TKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAV 149

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 42.8 bits (100), Expect = 6e-06
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+  K DV+ ++++  L ++  K  G +D++INNAG+    S    +  +  +++D NL 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 86  SNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYG 130
                 RE +   +EN+  G ++ +SS+           Y ASK G
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG 164

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 42.8 bits (100), Expect = 7e-06
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A+   ADVSD   ++ +     +  G +  + + AG+  S+          E+++ VNL 
Sbjct: 53  AIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLT 112

Query: 86  SNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVT 132
            +  + R+    +     G +V   S+A L  A  ++ Y A K GV 
Sbjct: 113 GSFLVARKAGEVL--EEGGSLVLTGSVAGLG-AFGLAHYAAGKLGVV 156

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 42.5 bits (99), Expect = 9e-06
 Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           AV  K DVSD+ ++    E  RK +G  D+++NNAG+  S+ + + T   ++++ ++N+ 
Sbjct: 52  AVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVK 111

Query: 86  SNIKMVREFLPDMLENNTGHIVCI-SSIAALTAAVNVSAYFASKYGVTENHPSI 138
             I  ++  +    +   G  +    S A       ++ Y +SK+ V     + 
Sbjct: 112 GVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTA 165

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 27  AVYFKADVSDKAEIKKLNENVR-KIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLM 85
           A     DV+D+A I +    +  + G +DIL+NNA +   + ++  T    +R+  +N+ 
Sbjct: 53  ACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVS 112

Query: 86  SNIKMVREFLPDMLENNTGHIVC-ISSIAALTAAVNVSAYFASKYGV 131
             + M++     M+    G  +  ++S A       V  Y A+K  V
Sbjct: 113 GTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAV 159

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 39.9 bits (92), Expect = 6e-05
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 21/126 (16%)

Query: 27  AVYFKADVSDKAEIKKLNEN-----VRKIGYVDILINNAGIVASSSVLAHTDHEIE---- 77
           AV  K D+S  + +    E+      R  G  D+L+NNA     + +L   D        
Sbjct: 54  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 113

Query: 78  -------RIMDVNLMSNIKMVREFLPDMLE-----NNTGHIVCISSIAALTAAVNVSAYF 125
                   +   N ++ + ++R F     E     +    +V +              Y 
Sbjct: 114 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 173

Query: 126 ASKYGV 131
            +K+ +
Sbjct: 174 MAKHAL 179

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 6e-05
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)

Query: 71  HTDHEIERIMDVNLMSNIKMVREFLPDMLENNT------GHIVCISSIAALTAAVNVSAY 124
           HT  + +R++DVNLM    ++R    +M +N        G I+  +S+AA    V  +AY
Sbjct: 104 HTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAY 163

Query: 125 FASKYGV 131
            ASK G+
Sbjct: 164 SASKGGI 170

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.5 bits (86), Expect = 4e-04
 Identities = 15/113 (13%), Positives = 37/113 (32%), Gaps = 3/113 (2%)

Query: 20  LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEI-ER 78
                 +    K     +  I +   +  +   VD +   AG  A  S  +    +  + 
Sbjct: 39  QADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADL 98

Query: 79  IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGV 131
           ++  ++ S+    +     +     G +    + AA+    ++  Y  +K  V
Sbjct: 99  MIKQSVWSSAIAAKLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAV 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	182
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.98
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.98
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.98
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.98
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.98
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.98
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.98
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.97
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.97
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.97
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.97
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.97
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.97
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.97
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.97
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.97
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.97
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.96
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.96
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.96
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.96
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.96
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.96
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.96
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.96
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.95
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.95
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.95
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.95
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.95
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.95
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.94
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.94
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.94
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.94
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.93
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.92
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.92
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.92
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.92
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.9
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.9
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.89
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.87
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.84
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.83
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.83
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.78
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.78
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.76
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.75
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.54
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.33
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.23
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.19
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.01
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.01
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.99
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.98
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.81
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.79
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.78
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.78
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.76
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.72
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.69
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.61
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.61
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.56
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.56
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.54
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.26
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.22
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.22
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	98.16
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.69
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.31
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.03
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.84
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	95.04
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	91.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	90.17

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.5e-33  Score=206.66  Aligned_cols=162  Identities=20%  Similarity=0.212  Sum_probs=140.7

Q ss_pred             cccccccccceeccCCCC--------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLP--------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      ++|.+.|+.|.+.+....        ..+.++.++.||++|+++++++++.+.+ ||++|++|||||.....++.+.+.+
T Consensus        23 ~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e  102 (247)
T d2ew8a1          23 ERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFE  102 (247)
T ss_dssp             HHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHH
T ss_pred             HHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHH
Confidence            467788998888764332        3467899999999999999999999999 9999999999999988999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      +|+.++++|+.++++++|+++|+|++++.|+||++||.++..+.+....|+++|+|+.+|+|+||.|+++.++.++..+|
T Consensus       103 ~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  182 (247)
T d2ew8a1         103 QWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP  182 (247)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEee
Confidence            99999999999999999999999999989999999999999999999999999999999999999999977666666688


Q ss_pred             Ccccccccccc
Q psy5462         155 LRSVTILYQRS  165 (182)
Q Consensus       155 ~~~~~~~~~~~  165 (182)
                      ++..|++.+..
T Consensus       183 G~i~T~~~~~~  193 (247)
T d2ew8a1         183 SLVRTATTEAS  193 (247)
T ss_dssp             CCC--------
T ss_pred             CCCCCcccccc
Confidence            88888776543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.2e-33  Score=206.34  Aligned_cols=144  Identities=24%  Similarity=0.348  Sum_probs=135.1

Q ss_pred             CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHH
Q psy5462          21 PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDML   99 (182)
Q Consensus        21 ~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~   99 (182)
                      ...+.++.++.||++|+++++++++.+.+ ||++|++|||||....+++.+.+.++|+.++++|+.++++++|+++|+|+
T Consensus        53 ~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~  132 (240)
T d2bd0a1          53 RAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALME  132 (240)
T ss_dssp             HTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHH
Confidence            45678999999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         100 ENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       100 ~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +++.|+||++||.++..+.++.+.|+++|+|+.+|+++|+.|+++.++.++..+|++..|++++.
T Consensus       133 ~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~  197 (240)
T d2bd0a1         133 RQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK  197 (240)
T ss_dssp             HHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred             hcCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh
Confidence            99899999999999999999999999999999999999999999876667777999998888765

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.5e-34  Score=208.24  Aligned_cols=161  Identities=19%  Similarity=0.221  Sum_probs=144.8

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|++.|+.|.+.+..           +...+.++.+++||++|+++++++++.+.+ ||++|+||||||.....++.+.
T Consensus        19 ~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~   98 (244)
T d1edoa_          19 LSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRM   98 (244)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhcc
Confidence            4678889888765422           123467899999999999999999999999 9999999999999988999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|++++++|+.++++++|+++|+|++++.|+||++||.++..+.++...|+++|+|+.+|+|+|+.|+++.++.+++
T Consensus        99 ~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~  178 (244)
T d1edoa_          99 KKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV  178 (244)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             chHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEE
Confidence            99999999999999999999999999999989999999999999999999999999999999999999999987666777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++.+.
T Consensus       179 I~PG~i~T~~~~~  191 (244)
T d1edoa_         179 VCPGFIASDMTAK  191 (244)
T ss_dssp             EEECSBCSHHHHT
T ss_pred             EecceeccHHHHH
Confidence            7899888887655

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4e-33  Score=204.87  Aligned_cols=161  Identities=25%  Similarity=0.266  Sum_probs=142.8

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|...++.          +...+.++.++.+|++|+++++++++.+.+ ||++|++|||||.....++.+.+
T Consensus        28 ~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~  107 (251)
T d2c07a1          28 KMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMK  107 (251)
T ss_dssp             HHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCC
T ss_pred             HHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecccccccccccccc
Confidence            5678889998887643          234577899999999999999999999999 99999999999999888899999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.++++++++++|+|++++.|+||++||.++..+.++..+|+++|+|+.+|+|+||.|+++.++.++.+
T Consensus       108 ~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V  187 (251)
T d2c07a1         108 NDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI  187 (251)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            99999999999999999999999999999899999999999999999999999999999999999999999776666667


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..|++.+.
T Consensus       188 ~PG~v~T~~~~~  199 (251)
T d2c07a1         188 APGFISSDMTDK  199 (251)
T ss_dssp             EECSBCC-----
T ss_pred             ccCCEecccccc
Confidence            899888887765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-32  Score=200.96  Aligned_cols=160  Identities=22%  Similarity=0.248  Sum_probs=136.4

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMDV   82 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~   82 (182)
                      ++|.++|+.|...++.. ....++..++||++|+++++++++.+.+ ||++|+||||||...+.++.+.+.++|+.++++
T Consensus        25 ~~la~~Ga~V~~~~r~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~v  103 (237)
T d1uzma1          25 QRLAADGHKVAVTHRGS-GAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINA  103 (237)
T ss_dssp             HHHHHTTCEEEEEESSS-CCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCc-chhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHh
Confidence            56788999998888654 4456788899999999999999999999 999999999999988899999999999999999


Q ss_pred             HhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccccccc
Q psy5462          83 NLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTILY  162 (182)
Q Consensus        83 n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~  162 (182)
                      |+.++++++|+++|+|++++.|+||++||.++..+.++...|+++|+|+.+|+++|+.|+++.++.++..+|++..|++.
T Consensus       104 Nl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~  183 (237)
T d1uzma1         104 NLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMT  183 (237)
T ss_dssp             HTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred             hhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999997766666668888888776


Q ss_pred             cc
Q psy5462         163 QR  164 (182)
Q Consensus       163 ~~  164 (182)
                      ..
T Consensus       184 ~~  185 (237)
T d1uzma1         184 RA  185 (237)
T ss_dssp             HH
T ss_pred             hc
Confidence            54

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.4e-33  Score=203.69  Aligned_cols=161  Identities=22%  Similarity=0.238  Sum_probs=145.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++..+       ..+.++..+.||++|+++++++++.+.+ ||++|++|||||.....++.+.+.++
T Consensus        22 ~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~  101 (243)
T d1q7ba_          22 ETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE  101 (243)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccccccccccccc
Confidence            467888999887764332       2256789999999999999999999999 99999999999999889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++|+++|+|++++.|+||++||.++..+.++.++|+++|+|+.+|+|++|.|+++.++.++..+|+
T Consensus       102 ~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG  181 (243)
T d1q7ba_         102 WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG  181 (243)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecc
Confidence            99999999999999999999999998899999999999999999999999999999999999999999776666666899


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|++...
T Consensus       182 ~i~T~~~~~  190 (243)
T d1q7ba_         182 FIETDMTRA  190 (243)
T ss_dssp             SBCCHHHHT
T ss_pred             eEechhhhh
Confidence            888887655

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7e-33  Score=204.64  Aligned_cols=161  Identities=24%  Similarity=0.270  Sum_probs=142.4

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|+++|+.|.+.++.-.            ..+.++.+++||++|+++++++++.+.+ ||++|+||||||....+++.+
T Consensus        22 ~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~  101 (260)
T d1x1ta1          22 TALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIED  101 (260)
T ss_dssp             HHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGG
T ss_pred             HHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhh
Confidence            567888999888775321            2356899999999999999999999999 999999999999998899999


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|+.++++|+.++++++++++|+|++++.|+||++||.++..+.++...|+++|+|+.+|++++|.|+++.++.++
T Consensus       102 ~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN  181 (260)
T d1x1ta1         102 FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN  181 (260)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred             hhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEE
Confidence            99999999999999999999999999999998999999999999999999999999999999999999999997766666


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|++.+.
T Consensus       182 ~I~PG~i~T~~~~~  195 (260)
T d1x1ta1         182 AICPGWVRTPLVEK  195 (260)
T ss_dssp             EEEECCBCC-----
T ss_pred             EEecCCCCChhhhh
Confidence            66899888887654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.3e-33  Score=202.69  Aligned_cols=160  Identities=24%  Similarity=0.234  Sum_probs=142.3

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      ++|.++|+.|...+...+..    .....+++||++|+++++++++.+.+ ||+||+||||||...++++.+.+.++|+.
T Consensus        23 ~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~  102 (248)
T d2d1ya1          23 QAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRR  102 (248)
T ss_dssp             HHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHH
Confidence            56788899988887553211    12456789999999999999999999 99999999999999889999999999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++++|+.++++++|+++|+|++++.|+||+++|..+..+.++...|+++|+|+.+|+|++|.|+++.++.++..+|++..
T Consensus       103 ~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~  182 (248)
T d2d1ya1         103 VLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA  182 (248)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             HHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence            99999999999999999999999899999999999999999999999999999999999999999776666666888888


Q ss_pred             ccccc
Q psy5462         159 TILYQ  163 (182)
Q Consensus       159 ~~~~~  163 (182)
                      |++..
T Consensus       183 T~~~~  187 (248)
T d2d1ya1         183 TEAVL  187 (248)
T ss_dssp             CHHHH
T ss_pred             CchHH
Confidence            87653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=8.5e-33  Score=202.07  Aligned_cols=161  Identities=25%  Similarity=0.247  Sum_probs=144.6

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++..       .+.+.++.+++||++|+++++++++.+.+ ||++|++|||||.....++.+++.++
T Consensus        24 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~  103 (244)
T d1nffa_          24 RAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTE  103 (244)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHH
Confidence            46788899888776432       12357889999999999999999999999 99999999999999889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |++++++|+.++++++|.+.|+|++++.|+||++||..+..+.+....|+++|+++.+|+|++|.|+++.++.++..+|+
T Consensus       104 ~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG  183 (244)
T d1nffa_         104 WQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG  183 (244)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeC
Confidence            99999999999999999999999999899999999999999999999999999999999999999999776666666888


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|++.+.
T Consensus       184 ~i~T~~~~~  192 (244)
T d1nffa_         184 LVKTPMTDW  192 (244)
T ss_dssp             CBCSGGGTT
T ss_pred             CccChhHhh
Confidence            888877654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=5.4e-33  Score=204.24  Aligned_cols=160  Identities=23%  Similarity=0.232  Sum_probs=144.0

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++..       ++.+.++.+++||++|+++++++++.+.+ ||++|++|||||.....++.+.+.++
T Consensus        23 ~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~  102 (254)
T d1hdca_          23 RQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER  102 (254)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccccccccccccc
Confidence            46778899887776432       24567899999999999999999999999 99999999999999889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+..+++|+.++++++++++|+|++++.|+||++||.++..+.++..+|+++|+|+.+|+|+||.|+++.++.++..+|+
T Consensus       103 ~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG  182 (254)
T d1hdca_         103 FRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG  182 (254)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeC
Confidence            99999999999999999999999999899999999999999999999999999999999999999999775666666888


Q ss_pred             cccccccc
Q psy5462         156 RSVTILYQ  163 (182)
Q Consensus       156 ~~~~~~~~  163 (182)
                      +..|++..
T Consensus       183 ~v~T~~~~  190 (254)
T d1hdca_         183 MTYTPMTA  190 (254)
T ss_dssp             SBCCHHHH
T ss_pred             cccCccch
Confidence            88777654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.98  E-value=2e-32  Score=201.82  Aligned_cols=161  Identities=21%  Similarity=0.216  Sum_probs=142.8

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~   69 (182)
                      ++|+++|+.|...++...            ..+.++.+++||++|+++++++++.+.+ ||+||+||||||... .+++.
T Consensus        22 ~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~  101 (258)
T d1iy8a_          22 VRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTE  101 (258)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGG
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchh
Confidence            467888999888764321            2356899999999999999999999999 999999999999865 46789


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +++.++|+.++++|+.++++++|++.|+|++++.|+||++||..+..+.+....|+++|+|+.+|+|+||.|+++.++.+
T Consensus       102 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrV  181 (258)
T d1iy8a_         102 SFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI  181 (258)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceE
Confidence            99999999999999999999999999999998899999999999999999999999999999999999999999776666


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|++..|++.+.
T Consensus       182 N~i~PG~v~T~~~~~  196 (258)
T d1iy8a_         182 NAIAPGAIWTPMVEN  196 (258)
T ss_dssp             EEEEECSBCSHHHHH
T ss_pred             EEEeeCcccCHHHHH
Confidence            667898888877643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.98  E-value=2.8e-32  Score=201.28  Aligned_cols=161  Identities=20%  Similarity=0.165  Sum_probs=144.1

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|...++..           ...+.++.+++||++|+++++++++.+.+ ||+||+||||||...+.++.+.
T Consensus        25 ~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~  104 (261)
T d1geea_          25 IRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM  104 (261)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhc
Confidence            56788899888876442           23467899999999999999999999999 9999999999999988999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|++++++|+.++++++|+++|+|.+++. ++||++||.++..+.+...+|+++|+|+.+|+++||.|+++.++.++
T Consensus       105 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN  184 (261)
T d1geea_         105 SLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVN  184 (261)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccchhhHHHHHHHhhhhCcEEE
Confidence            99999999999999999999999999998775 46999999999999999999999999999999999999998767777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      .++|++..|++...
T Consensus       185 ~I~PG~v~T~~~~~  198 (261)
T d1geea_         185 NIGPGAINTPINAE  198 (261)
T ss_dssp             EEEECSBCSGGGHH
T ss_pred             EEeeCcCcCHhHhh
Confidence            77899888887654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.98  E-value=2.1e-32  Score=201.43  Aligned_cols=161  Identities=19%  Similarity=0.225  Sum_probs=143.4

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|...++.          +...+.++.+++||++|+++++++++.+.+ ||+||+||||||....+++.+++
T Consensus        19 ~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~   98 (255)
T d1gega_          19 LRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESIT   98 (255)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhh
Confidence            5678889988887643          234567899999999999999999999999 99999999999998889999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      .++|++++++|+.++++++|+++|+|.+++ .++||++||.++..+.++...|+++|+|+.+|+|+||.|+++.++.++.
T Consensus        99 ~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~  178 (255)
T d1gega_          99 PEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG  178 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEE
Confidence            999999999999999999999999988765 5889999999999999999999999999999999999999977666666


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       179 I~PG~i~T~~~~~  191 (255)
T d1gega_         179 YCPGIVKTPMWAE  191 (255)
T ss_dssp             EEECSBSSHHHHH
T ss_pred             EecCcccChHHhh
Confidence            6888888877654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.98  E-value=1.9e-32  Score=201.20  Aligned_cols=161  Identities=25%  Similarity=0.271  Sum_probs=142.9

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|...++..           +..+.++.++.||++|+++++++++.+.+ ||+||+||||||....+++.+.
T Consensus        23 ~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~  102 (251)
T d1vl8a_          23 QGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEF  102 (251)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhC
Confidence            56788899988876432           12366899999999999999999999999 9999999999999888999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++|+++|+|++++.|+||+++|..+. .+.++...|+++|+|+.+|+++|+.|+++.++.++
T Consensus       103 ~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN  182 (251)
T d1vl8a_         103 PLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVN  182 (251)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEE
Confidence            99999999999999999999999999999989999999997764 46778899999999999999999999997766777


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|++...
T Consensus       183 ~I~PG~i~T~~~~~  196 (251)
T d1vl8a_         183 VIAPGWYRTKMTEA  196 (251)
T ss_dssp             EEEECCBCSTTTHH
T ss_pred             EEeeCcccCHHHHh
Confidence            77999888887654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2.2e-32  Score=201.29  Aligned_cols=160  Identities=20%  Similarity=0.213  Sum_probs=143.1

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|+++|+.|...++.          +...+.++.+++||++|+++++++++.+.+ ||++|++|||||...+.++ +.+
T Consensus        29 ~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~-e~~  107 (255)
T d1fmca_          29 ITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMP  107 (255)
T ss_dssp             HHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT-TCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcc-cCC
Confidence            5678889998888743          234567899999999999999999999999 9999999999998877666 789


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT  152 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~  152 (182)
                      .++|+.++++|+.+++++++.+.|+|.+++.|+||++||.++..+.++..+|+++|+|+.+|+|+||.|+++.++.++.+
T Consensus       108 ~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I  187 (255)
T d1fmca_         108 MADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI  187 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876666666


Q ss_pred             CCCccccccccc
Q psy5462         153 TPLRSVTILYQR  164 (182)
Q Consensus       153 ~~~~~~~~~~~~  164 (182)
                      +|++..|+....
T Consensus       188 ~PG~i~T~~~~~  199 (255)
T d1fmca_         188 APGAILTDALKS  199 (255)
T ss_dssp             EECSBCSHHHHT
T ss_pred             eeCcCcChHhhc
Confidence            888888876654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.98  E-value=2.6e-32  Score=201.30  Aligned_cols=161  Identities=19%  Similarity=0.133  Sum_probs=143.8

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cC-CccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IG-YVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~-~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|...++..          ...+.++.++.||++|+++++++++.+.+ |+ ++|++|||||.....++.+.
T Consensus        26 ~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~  105 (259)
T d2ae2a_          26 EELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY  105 (259)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccC
Confidence            46778899888876432          23467899999999999999999999988 87 79999999999988899999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.++++++++++|+|++++.|+||++||..+..+.++...|+++|+|+.+|+|++|.|+++.++.++.
T Consensus       106 ~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  185 (259)
T d2ae2a_         106 TVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNG  185 (259)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEE
T ss_pred             CHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEE
Confidence            99999999999999999999999999999989999999999999999999999999999999999999999976566666


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|+++.|++.+.
T Consensus       186 I~PG~i~T~~~~~  198 (259)
T d2ae2a_         186 VGPGVIATSLVEM  198 (259)
T ss_dssp             EEECSBCSHHHHH
T ss_pred             eeeCcccCHHHHh
Confidence            6888888877644

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.98  E-value=1.8e-32  Score=202.11  Aligned_cols=161  Identities=24%  Similarity=0.196  Sum_probs=143.2

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|++.|+.|...++..          ...+.++.+++||++|+++++++++.+.+ ||+||+||||||....+++.+.+
T Consensus        20 ~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~   99 (257)
T d2rhca1          20 RRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELA   99 (257)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcC
Confidence            46778899888876432          24467899999999999999999999999 99999999999999889999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHH--HHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPD--MLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .++|+.++++|+.++++++|+++|+  |.+++.|+||+++|..+..+.+...+|+++|+|+.+|+|+||.|+++.++.++
T Consensus       100 ~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN  179 (257)
T d2rhca1         100 DELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN  179 (257)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence            9999999999999999999999997  55667799999999999999999999999999999999999999997766666


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      .++|++..|++...
T Consensus       180 ~I~PG~i~T~~~~~  193 (257)
T d2rhca1         180 AVCPGFVETPMAAS  193 (257)
T ss_dssp             EEEECSBCSHHHHH
T ss_pred             EEeeCCCCCHHHHH
Confidence            66888888877644

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.97  E-value=3.7e-32  Score=200.66  Aligned_cols=159  Identities=19%  Similarity=0.221  Sum_probs=142.6

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC-CCcccC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS-SSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~-~~~~~~   71 (182)
                      ++|.+.|+.|...+..          +...+.++.++.||++|+++++++++.+.+ ||++|++|||||.... +++.+.
T Consensus        23 ~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~  102 (260)
T d1zema1          23 LRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDY  102 (260)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccc
Confidence            4677888888877633          234577899999999999999999999999 9999999999998754 779999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.++++++++++|+|.+++.|+||++||.++..+.++..+|+++|+|+.+|+|+||.|+++.++.++.
T Consensus       103 ~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~  182 (260)
T d1zema1         103 PSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA  182 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            99999999999999999999999999999989999999999999999999999999999999999999999977666666


Q ss_pred             eCCCccccccc
Q psy5462         152 TTPLRSVTILY  162 (182)
Q Consensus       152 ~~~~~~~~~~~  162 (182)
                      .+|+++.|++.
T Consensus       183 I~PG~v~T~~~  193 (260)
T d1zema1         183 ISPGYMGPGFM  193 (260)
T ss_dssp             EEECSBCSSHH
T ss_pred             eccCcccCcch
Confidence            68888888764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.97  E-value=2.3e-31  Score=195.35  Aligned_cols=162  Identities=23%  Similarity=0.183  Sum_probs=140.8

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|.++|+.|...++..+         ..+.++.++.||++|+++++++++.+.+ ||+||+||||||....+++.+.+.
T Consensus        24 ~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~  103 (251)
T d1zk4a1          24 TKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTT  103 (251)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccc
Confidence            467888998888764321         2356899999999999999999999999 999999999999999899999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCC-CeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC--CCcccee
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNT-GHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG--YMLWGTT  150 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~--~~~~~i~  150 (182)
                      ++|+.++++|+.++++++++++|+|++++. ++||++||.++..+.+....|+++|+++.+|++++|.|++  +.++.++
T Consensus       104 ~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN  183 (251)
T d1zk4a1         104 AEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVN  183 (251)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             cchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEE
Confidence            999999999999999999999999998875 5899999999999999999999999999999999999954  4444444


Q ss_pred             eeCCCcccccccccc
Q psy5462         151 VTTPLRSVTILYQRS  165 (182)
Q Consensus       151 v~~~~~~~~~~~~~~  165 (182)
                      .++|++..|++.+..
T Consensus       184 ~I~PG~i~T~~~~~~  198 (251)
T d1zk4a1         184 TVHPGYIKTPLVDDL  198 (251)
T ss_dssp             EEEECCBCCHHHHTS
T ss_pred             EEeCCCCCChhHHhc
Confidence            458888888776553

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=9.8e-32  Score=198.17  Aligned_cols=161  Identities=24%  Similarity=0.207  Sum_probs=125.5

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|++.|+.|...++..          ...+.++.++.||++++++++++++.+.+ | |++|++|||||.....++.+.
T Consensus        26 ~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~  105 (259)
T d1xq1a_          26 EEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY  105 (259)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhC
Confidence            46778899888776432          23466899999999999999999999988 8 689999999999988999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.++++++|+++|+|++++.|+||++||..+..+.+....|+++|+|+.+|+|++|.|+++.++.++.
T Consensus       106 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~  185 (259)
T d1xq1a_         106 TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANA  185 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhHHHHHHhcccCeEEEE
Confidence            99999999999999999999999999999889999999999999999999999999999999999999999987667777


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      ++|++..|++.+.
T Consensus       186 V~PG~i~T~~~~~  198 (259)
T d1xq1a_         186 VAPAVIATPLAEA  198 (259)
T ss_dssp             EECCSCC------
T ss_pred             eccCcccCHHhhh
Confidence            7899888877654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.97  E-value=1.9e-31  Score=196.37  Aligned_cols=161  Identities=19%  Similarity=0.188  Sum_probs=143.0

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...++..+       +.+.++.++.||++|+++++++++.+.+ ||+||++|||||....+++.+.+.++
T Consensus        23 ~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~  102 (256)
T d1k2wa_          23 EAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES  102 (256)
T ss_dssp             HHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHH
Confidence            567888999888774432       2367899999999999999999999999 99999999999999889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTP  154 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~  154 (182)
                      |+..+++|+.+++++++++.|+|.+++ .|+||++||.++..+.+....|+++|+|+.+|++++|.|+++.++.++.++|
T Consensus       103 ~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~P  182 (256)
T d1k2wa_         103 YDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP  182 (256)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEec
Confidence            999999999999999999999877654 6999999999999999999999999999999999999999977666666688


Q ss_pred             Cccccccccc
Q psy5462         155 LRSVTILYQR  164 (182)
Q Consensus       155 ~~~~~~~~~~  164 (182)
                      ++..|++.+.
T Consensus       183 G~i~T~~~~~  192 (256)
T d1k2wa_         183 GVVDGEHWDG  192 (256)
T ss_dssp             CCBCCTTHHH
T ss_pred             CCCCchhhhh
Confidence            8888887654

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.7e-32  Score=198.08  Aligned_cols=161  Identities=27%  Similarity=0.318  Sum_probs=143.0

Q ss_pred             cccccccccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+...+...          ...+.+++++.||++|+++++++++.+.+ +|++|++|||||......+.+.+
T Consensus        25 ~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~  104 (244)
T d1yb1a_          25 YEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQ  104 (244)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccc
Confidence            46778899888887443          24567899999999999999999999999 99999999999999988899999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC---Cccce
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY---MLWGT  149 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~---~~~~i  149 (182)
                      .++|+.++++|+.++++++++++|+|++++.|+||++||.++..|.++++.|+++|+|+.+|+++|+.|+++   .++.+
T Consensus       105 ~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V  184 (244)
T d1yb1a_         105 DPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKT  184 (244)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred             hhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999875   23556


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|+++.|++.+.
T Consensus       185 ~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         185 TCLCPNFVNTGFIKN  199 (244)
T ss_dssp             EEEEETHHHHCSTTC
T ss_pred             EEEEcCCCCChhhhC
Confidence            666888888876654

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=197.05  Aligned_cols=160  Identities=18%  Similarity=0.234  Sum_probs=140.2

Q ss_pred             cccccccccceeccCCCC------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~~   75 (182)
                      ++|+++|+.|...++..+      +...++.++.||++|+++++++++.+.+ ||+||+||||||... ..++.+.+.++
T Consensus        24 ~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~  103 (250)
T d1ydea1          24 RAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQG  103 (250)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHH
Confidence            467888998888874321      2335688999999999999999999999 999999999999765 46688999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.++++++|+++|+|+++ +|+||++||.++..+.+...+|+++|+|+.+|+|+||.|+++.++.++..+|+
T Consensus       104 ~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG  182 (250)
T d1ydea1         104 FRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPG  182 (250)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             HHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeC
Confidence            99999999999999999999999875 49999999999999999999999999999999999999999776677777999


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|++.+.
T Consensus       183 ~i~T~~~~~  191 (250)
T d1ydea1         183 NIWTPLWEE  191 (250)
T ss_dssp             SBCCHHHHH
T ss_pred             CCCChhHHH
Confidence            888876643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=2.6e-31  Score=195.30  Aligned_cols=159  Identities=19%  Similarity=0.234  Sum_probs=139.1

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|...+....       +.+.+..+++||++|+++++++++.+.+ ||++|++|||||...+.++.+.+.++
T Consensus        24 ~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~  103 (253)
T d1hxha_          24 KLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLED  103 (253)
T ss_dssp             HHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHH
Confidence            467888999887764321       2367789999999999999999999999 99999999999999888999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee--C
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT--T  153 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~--~  153 (182)
                      |++++++|+.++++++++++|+|+++ +|+||++||.++..+.+...+|+++|+|+.+|++++|.|+++...+||||  +
T Consensus       104 ~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~  182 (253)
T d1hxha_         104 FSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH  182 (253)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEe
Confidence            99999999999999999999999765 59999999999999999999999999999999999999998654445555  7


Q ss_pred             CCcccccccc
Q psy5462         154 PLRSVTILYQ  163 (182)
Q Consensus       154 ~~~~~~~~~~  163 (182)
                      |++..|++..
T Consensus       183 PG~i~T~~~~  192 (253)
T d1hxha_         183 PDGIYTPMMQ  192 (253)
T ss_dssp             ESEECCHHHH
T ss_pred             ECCCcCHhHH
Confidence            7777776653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=8.8e-31  Score=191.26  Aligned_cols=161  Identities=18%  Similarity=0.107  Sum_probs=139.3

Q ss_pred             cccccccccceeccCCCCC-----CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|...++....     ...+++++.||++|+++++++++.+.+ ||+||+||||||...+.++.+.+.++|+
T Consensus        23 ~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~  102 (242)
T d1ulsa_          23 ELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWE  102 (242)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhh
Confidence            4678889988887743321     123577899999999999999999999 9999999999999988999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.++++++|+++|+|.+++.+.|+++||. +..+.++..+|+++|+|+.+|+|+||.|+++.++.++..+|++.
T Consensus       103 ~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v  181 (242)
T d1ulsa_         103 LVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFI  181 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             ccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcc
Confidence            99999999999999999999998887888887774 56788899999999999999999999999977666666689888


Q ss_pred             cccccccc
Q psy5462         158 VTILYQRS  165 (182)
Q Consensus       158 ~~~~~~~~  165 (182)
                      .|++....
T Consensus       182 ~T~~~~~~  189 (242)
T d1ulsa_         182 ETRMTAKV  189 (242)
T ss_dssp             CCTTTSSS
T ss_pred             cChhhhcC
Confidence            88877653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-30  Score=193.33  Aligned_cols=160  Identities=21%  Similarity=0.277  Sum_probs=137.7

Q ss_pred             cccccccccceecc----------------CCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIP----------------WCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~----------------~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.+..+.                .++...+.++..+.||++|++++.++++.+.+ |.+|++|||+|....++
T Consensus        20 ~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~-g~idilvnnag~~~~~~   98 (285)
T d1jtva_          20 VRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE-GRVDVLVCNAGLGLLGP   98 (285)
T ss_dssp             HHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-SCCSEEEECCCCCCCSC
T ss_pred             HHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-cchhhhhhccccccccc
Confidence            45667777655442                12234577899999999999999999887654 78999999999999899


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|+.++++|+.|+++++++++|+|++++.|+||++||.++..+.+....|+++|+|+.+|+++|+.|+++.++
T Consensus        99 ~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gI  178 (285)
T d1jtva_          99 LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV  178 (285)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             ccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCc
Confidence            99999999999999999999999999999999998999999999999999999999999999999999999999998777


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+++++|+++.|++.+.
T Consensus       179 rVn~V~PG~v~T~~~~~  195 (285)
T d1jtva_         179 HLSLIECGPVHTAFMEK  195 (285)
T ss_dssp             EEEEEEECCBCC-----
T ss_pred             EEEEEecCCCCChHHHH
Confidence            77778999999887754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.97  E-value=4.2e-31  Score=194.19  Aligned_cols=161  Identities=16%  Similarity=0.124  Sum_probs=139.9

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCC-CCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVA-SSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~-~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|...++.....    .....++.||++++++++++++.+.+ ||+||+||||||... .+++.+.+.++|+
T Consensus        18 ~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~   97 (252)
T d1zmta1          18 LRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYR   97 (252)
T ss_dssp             HHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHH
Confidence            46788899988876543321    11234568999999999999999999 999999999999865 4789999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      ..+++|+.++++++|+++|+|++++.|+||++||.++..+.+....|+++|+|+.+|+|+||.|+++.++.++..+|++.
T Consensus        98 ~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i  177 (252)
T d1zmta1          98 GAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYL  177 (252)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSB
T ss_pred             HHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCC
Confidence            99999999999999999999999989999999999999999999999999999999999999999987667777799888


Q ss_pred             ccccccc
Q psy5462         158 VTILYQR  164 (182)
Q Consensus       158 ~~~~~~~  164 (182)
                      .|+....
T Consensus       178 ~T~~~~~  184 (252)
T d1zmta1         178 HSEDSPY  184 (252)
T ss_dssp             CCBTCCS
T ss_pred             cCcchhh
Confidence            8876543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.96  E-value=1.4e-29  Score=187.60  Aligned_cols=161  Identities=20%  Similarity=0.283  Sum_probs=137.9

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC--CcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS--SVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~--~~~~~   71 (182)
                      ++|+++|+.|...+....         ....++.++.||++|+++++++++.+.+ ||++|++|||||.....  .+.+.
T Consensus        24 ~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  103 (268)
T d2bgka1          24 KLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEA  103 (268)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccC
Confidence            567888999888764321         1345688899999999999999999999 99999999999986543  47888


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCC-chhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNV-SAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~-~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+.++++|+.++++++|+++|+|.+++.|+||+++|..+..+.++. ..|+++|+|+.+|++++|.|+++.++.++
T Consensus       104 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN  183 (268)
T d2bgka1         104 GNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN  183 (268)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             cHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHHHhCHHHHHHHhChhCeEEE
Confidence            99999999999999999999999999999989999999999988866654 48999999999999999999997766666


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      ..+|++..|++...
T Consensus       184 ~I~PG~i~T~~~~~  197 (268)
T d2bgka1         184 CVSPYIVASPLLTD  197 (268)
T ss_dssp             EEEESCCSCCCCTT
T ss_pred             ecCCCCccChHHhh
Confidence            66888888876644

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=1.5e-29  Score=187.67  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=134.5

Q ss_pred             cccccccccceeccCCC----------CC---CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc-
Q psy5462           4 DRTTGHIHGILFIPWCL----------PT---KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV-   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~-   68 (182)
                      ++|.++|+.|...++..          ..   .+.++.++.||++|+++++++++.+.+ ||++|++|||||...+.++ 
T Consensus        23 ~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~  102 (272)
T d1xkqa_          23 ILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFG  102 (272)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCccccc
Confidence            56788899888876432          11   345799999999999999999999999 9999999999999876554 


Q ss_pred             ---ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEec-cccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          69 ---LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISS-IAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        69 ---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss-~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                         .+.+.++|+.++++|+.++++++++++|+|++++ |.+|+++| .++..+.+....|+++|+|+.+|+|+||.|+++
T Consensus       103 ~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~  181 (272)
T d1xkqa_         103 TTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK  181 (272)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcc
Confidence               4577889999999999999999999999998865 45555554 567888899999999999999999999999998


Q ss_pred             CccceeeeCCCccccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .++.++.++|+++.|++...
T Consensus       182 ~gIrVN~I~PG~i~T~~~~~  201 (272)
T d1xkqa_         182 FGIRVNSVSPGMVETGFTNA  201 (272)
T ss_dssp             TTCEEEEEEECCBCSSHHHH
T ss_pred             cCeEEEEEeeCCCcchhhhc
Confidence            76677777899888877654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=7.3e-30  Score=191.76  Aligned_cols=159  Identities=17%  Similarity=0.135  Sum_probs=137.7

Q ss_pred             cccccccccceeccCCCCCC----------------CceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----------------THVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----------------~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~   66 (182)
                      ++|.++|+.|.+.+......                +.+...+.+|++|.++++++++.+.+ ||+||+||||||...++
T Consensus        25 ~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~  104 (302)
T d1gz6a_          25 LAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR  104 (302)
T ss_dssp             HHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCC
T ss_pred             HHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence            46788899888775332211                13456788999999999999999999 99999999999999999


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      ++.+++.++|+.++++|+.++++++|+++|+|++++.|+||++||.++..+.++...|+++|+|+.+|+++|+.|+++.+
T Consensus       105 ~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~g  184 (302)
T d1gz6a_         105 SFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNN  184 (302)
T ss_dssp             CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGT
T ss_pred             ChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999899999999999999999999999999999999999999999765


Q ss_pred             cceeeeCCCccccccc
Q psy5462         147 WGTTVTTPLRSVTILY  162 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~  162 (182)
                      +.++..+|++..+...
T Consensus       185 IrVN~I~PG~~~t~~~  200 (302)
T d1gz6a_         185 IHCNTIAPNAGSRMTE  200 (302)
T ss_dssp             EEEEEEEEECCSTTTG
T ss_pred             CceeeeCCCCCCcchh
Confidence            5555557776655443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.7e-29  Score=185.82  Aligned_cols=159  Identities=15%  Similarity=0.129  Sum_probs=139.1

Q ss_pred             cccccccccceeccCCC---------------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCL---------------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~   67 (182)
                      ++|.+.|+.|.+.++..               ...+.++..+.||++|+++++++++.+.+ +|++|+||||||.....+
T Consensus        30 ~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~  109 (297)
T d1yxma1          30 KELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSP  109 (297)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCc
Confidence            56778899888776321               23467899999999999999999999999 999999999999988899


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.+.+.++|+..+++|+.++++++++++|+|.+++.++||++|+. +..+.+....|+++|+|+.+|+|++|.|+++.++
T Consensus       110 ~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gI  188 (297)
T d1yxma1         110 AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGI  188 (297)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred             hhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccccccccchhHHHHHHHHHHHHHHHhcccCc
Confidence            999999999999999999999999999999999888999998664 4567788999999999999999999999997766


Q ss_pred             ceeeeCCCcccccccc
Q psy5462         148 GTTVTTPLRSVTILYQ  163 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~  163 (182)
                      .++.++|+++.|+...
T Consensus       189 rVN~I~PG~i~T~~~~  204 (297)
T d1yxma1         189 RINCVAPGVIYSQTAV  204 (297)
T ss_dssp             EEEEEEECSBCCTGGG
T ss_pred             eEEEeeeCcCcCcchh
Confidence            6666688888777654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.96  E-value=1.6e-29  Score=186.16  Aligned_cols=161  Identities=23%  Similarity=0.251  Sum_probs=140.9

Q ss_pred             cccccccccceeccCC----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-c-CCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-I-GYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~-~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|...++.          +...+.+++++.||++++++++++++.+.+ + +++|++|||||.....++.++
T Consensus        24 ~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~  103 (258)
T d1ae1a_          24 EELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF  103 (258)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccC
Confidence            4678889988888743          234567889999999999999999999999 8 589999999999998999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++++++++.|+|.+++.|+||++||..+..+.+....|+++|+|+.+|++.||+|+++.++.++.
T Consensus       104 ~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~  183 (258)
T d1ae1a_         104 TEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNS  183 (258)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999977666666


Q ss_pred             eCCCccccccccc
Q psy5462         152 TTPLRSVTILYQR  164 (182)
Q Consensus       152 ~~~~~~~~~~~~~  164 (182)
                      .+|++..|++...
T Consensus       184 I~PG~i~T~~~~~  196 (258)
T d1ae1a_         184 VAPGVILTPLVET  196 (258)
T ss_dssp             EEECSBC------
T ss_pred             EeeCcccCcchhh
Confidence            6888888876544

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.96  E-value=1.6e-29  Score=186.92  Aligned_cols=160  Identities=20%  Similarity=0.157  Sum_probs=127.2

Q ss_pred             cccccccccceeccCCCC-------------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC---
Q psy5462           4 DRTTGHIHGILFIPWCLP-------------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS---   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~---   66 (182)
                      ++|+++|+.|...++...             ..+.++.++.||++|+++++++++.+.+ ||++|++|||||...+.   
T Consensus        23 ~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~  102 (264)
T d1spxa_          23 VLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQS  102 (264)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC--------
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccc
Confidence            567888999888764321             1235799999999999999999999999 99999999999986543   


Q ss_pred             -CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccc-cccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          67 -SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIA-ALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        67 -~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~-~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                       .+.+.+.++|+..+++|+.++++++++++|+|++++ |.+|+++|.. +..+.+....|+++|+|+.+|+|+||.|+++
T Consensus       103 ~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~  181 (264)
T d1spxa_         103 KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ  181 (264)
T ss_dssp             -----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcc
Confidence             355678999999999999999999999999998765 5666666654 5778899999999999999999999999997


Q ss_pred             CccceeeeCCCccccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .++.++.++|++..|++...
T Consensus       182 ~gIrVN~V~PG~v~T~~~~~  201 (264)
T d1spxa_         182 HGIRVNSISPGLVATGFGSA  201 (264)
T ss_dssp             GTCEEEEEEECCBCCCC---
T ss_pred             cCeEEEEEeeCCCCCcchhc
Confidence            76666667888888876543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.96  E-value=4.6e-29  Score=185.26  Aligned_cols=161  Identities=13%  Similarity=0.058  Sum_probs=138.6

Q ss_pred             cccccccccceeccCCCC----------C---CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------T---KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------~---~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~   67 (182)
                      ++|++.|+.|...++...          .   .+.++.++.||++|+++++++++.+.+ ||++|++|||||....  ..
T Consensus        22 ~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~  101 (274)
T d1xhla_          22 VIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTA  101 (274)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccc
Confidence            467788998888764321          1   235789999999999999999999999 9999999999997654  34


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      ..+.+.++|+..+++|+.++++++|++.|+|++++.+.|+++||.++..+.++...|+++|+|+.+|+|++|.|+++.++
T Consensus       102 ~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gI  181 (274)
T d1xhla_         102 NTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV  181 (274)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             cccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHhHhCC
Confidence            56678999999999999999999999999999988899999999888888899999999999999999999999997766


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .++.++|+++.|++...
T Consensus       182 rVN~I~PG~i~T~~~~~  198 (274)
T d1xhla_         182 RVNSVSPGAVATGFMGA  198 (274)
T ss_dssp             EEEEEEECCBCSSHHHH
T ss_pred             ceeeeccCCCcCchhhh
Confidence            66667898888876543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=7.9e-30  Score=186.15  Aligned_cols=158  Identities=22%  Similarity=0.199  Sum_probs=135.8

Q ss_pred             cccccccccceeccCCCC------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|...++..+      ....++.++.||++|++++++++++   ||++|+||||||....+++.+.+.++|+
T Consensus        23 ~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~---~g~iDilVnnAg~~~~~~~~~~~~~~~~   99 (242)
T d1cyda_          23 KALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG---IGPVDLLVNNAALVIMQPFLEVTKEAFD   99 (242)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT---CCCCSEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH---cCCCeEEEECCccccchhHHHHHHHHHH
Confidence            567888999888874332      1234678899999999998776543   6999999999999888999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      ..+++|+.++++++|.+.|+|.++ .+|+||+++|..+..+.+....|+++|+|+.+|+|+||.|+++.++.++..+|++
T Consensus       100 ~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~  179 (242)
T d1cyda_         100 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTV  179 (242)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCC
Confidence            999999999999999999987654 5799999999999999999999999999999999999999997766666668888


Q ss_pred             cccccccc
Q psy5462         157 SVTILYQR  164 (182)
Q Consensus       157 ~~~~~~~~  164 (182)
                      ..|++...
T Consensus       180 i~T~~~~~  187 (242)
T d1cyda_         180 VLTDMGKK  187 (242)
T ss_dssp             BTTHHHHH
T ss_pred             ccCHHHHh
Confidence            88877654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.96  E-value=3.7e-28  Score=179.11  Aligned_cols=161  Identities=17%  Similarity=0.138  Sum_probs=138.0

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|...++....           .+.++.++.||++|+++++++++.+.+ ||++|++|||||.....++.+.
T Consensus        27 ~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~  106 (260)
T d1h5qa_          27 RAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL  106 (260)
T ss_dssp             HHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGC
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHh
Confidence            5688899999888765432           256899999999999999999999999 9999999999999988999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEecccccc-------ccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALT-------AAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~-------~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.++|+..+++|+.+++++++++.|+|.++ ..+.|+++++.....       +.++...|+++|+|+.+|+|++|.|++
T Consensus       107 ~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~  186 (260)
T d1h5qa_         107 THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA  186 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhc
Confidence            999999999999999999999999998754 467777777765432       345678999999999999999999999


Q ss_pred             CCccceeeeCCCccccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.++.++..+|++..|+....
T Consensus       187 ~~gIrvN~I~PG~i~T~~~~~  207 (260)
T d1h5qa_         187 SAGIRVNALSPGYVNTDQTAH  207 (260)
T ss_dssp             GGTEEEEEEEECSBCCGGGGG
T ss_pred             hhCeEEeecCCCcccCcchhc
Confidence            776666666888888877654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-29  Score=183.25  Aligned_cols=159  Identities=19%  Similarity=0.183  Sum_probs=135.9

Q ss_pred             cccccccccceeccCCCCC------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+.|...++..+.      ....+..+.+|++|++++++++++   +|+||++|||||....+++.+.+.++|+
T Consensus        25 ~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~---~g~iDilVnnAg~~~~~~~~~~~~~~~~  101 (244)
T d1pr9a_          25 QALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS---VGPVDLLVNNAAVALLQPFLEVTKEAFD  101 (244)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT---CCCCCEEEECCCCCCCBCGGGCCHHHHH
T ss_pred             HHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHH---hCCceEEEeccccccccchhhhhHHHHH
Confidence            5678889998887744321      124578899999999998876643   6999999999999988999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHh-CCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCc
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLE-NNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~  156 (182)
                      ..+++|+.++++++++++|+|.+ ++.|+||++||.++..+.+....|+++|+|+.+|+|++|.|+++.++.++..+|++
T Consensus       102 ~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~  181 (244)
T d1pr9a_         102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTV  181 (244)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             HHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCc
Confidence            99999999999999999997654 45799999999999999999999999999999999999999997655666668888


Q ss_pred             ccccccccc
Q psy5462         157 SVTILYQRS  165 (182)
Q Consensus       157 ~~~~~~~~~  165 (182)
                      +.|++.+..
T Consensus       182 v~T~~~~~~  190 (244)
T d1pr9a_         182 VMTSMGQAT  190 (244)
T ss_dssp             BCSHHHHTT
T ss_pred             CcChHHhhh
Confidence            888876553

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.9e-28  Score=179.29  Aligned_cols=160  Identities=21%  Similarity=0.230  Sum_probs=134.2

Q ss_pred             cccccccccceeccCCC----------CC--CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCL----------PT--KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|...++..          ..  .+.++.+++||++++++++++++.+.+ ||+||+||||||...++++.+
T Consensus        28 ~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~  107 (257)
T d1xg5a_          28 RALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS  107 (257)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTT
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCcccc
Confidence            46778888887776332          12  235899999999999999999999999 999999999999998899999


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccc--cCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTA--AVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~--~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      .+.++|+..+++|+.+++++++.++|.|++++  +|+||++||.++...  .+....|+++|+++.+|+++|+.|+.+..
T Consensus       108 ~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~  187 (257)
T d1xg5a_         108 GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ  187 (257)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCC
Confidence            99999999999999999999999999998765  699999999998654  45567799999999999999999984333


Q ss_pred             cceeee--CCCcccccccc
Q psy5462         147 WGTTVT--TPLRSVTILYQ  163 (182)
Q Consensus       147 ~~i~v~--~~~~~~~~~~~  163 (182)
                      .+|+||  +|+...++...
T Consensus       188 ~~I~vn~i~PG~i~t~~~~  206 (257)
T d1xg5a_         188 THIRATCISPGVVETQFAF  206 (257)
T ss_dssp             CCCEEEEEEESCBCSSHHH
T ss_pred             CCEEEEEEeCCCCCChhhh
Confidence            355555  67776666554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.95  E-value=1.5e-28  Score=182.67  Aligned_cols=158  Identities=17%  Similarity=0.146  Sum_probs=134.7

Q ss_pred             cccccccccceeccCCCC-------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCC-----ccc
Q psy5462           4 DRTTGHIHGILFIPWCLP-------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSS-----VLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~-----~~~   70 (182)
                      ++|.++|+.|...++..+       +.+.++.++.||++++++++++++.+.+ ||++|++|||||......     ..+
T Consensus        23 ~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e  102 (276)
T d1bdba_          23 DRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEE  102 (276)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTT
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCcccccccc
Confidence            467888999888875432       2357899999999999999999999999 999999999999865432     234


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      .+.++|++++++|+.++++++|+++|+|++++ |+||+++|..+..+.+....|+++|+|+.+|+|+||.|+++. +.++
T Consensus       103 ~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN  180 (276)
T d1bdba_         103 SLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVN  180 (276)
T ss_dssp             THHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEE
T ss_pred             chhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEc
Confidence            45567999999999999999999999998764 899999999999999999999999999999999999999864 6666


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      .++|+++.|++..
T Consensus       181 ~I~PG~i~T~~~~  193 (276)
T d1bdba_         181 GVGSGGINSDLRG  193 (276)
T ss_dssp             EEEECCCCSCCCC
T ss_pred             ccCCCCEecCcCC
Confidence            6688888877653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-27  Score=174.61  Aligned_cols=153  Identities=24%  Similarity=0.289  Sum_probs=131.4

Q ss_pred             cccccccccceeccCCC----------C--CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCL----------P--TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~----------~--~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|.++|+.|...++..          .  ..+.++.++.||++|+++++++++.+.+ ||++|+||||||....     
T Consensus        21 ~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~-----   95 (254)
T d2gdza1          21 EALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-----   95 (254)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS-----
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc-----
Confidence            46778899888876432          1  2356899999999999999999999999 9999999999998643     


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHH--HHhhhCCC
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPS--IKCFSGYM  145 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~--la~e~~~~  145 (182)
                         ++|+..+++|+.+++++++.++|+|.+++   +|+||++||.++..|.+...+|+++|+|+.+|+|+  |+.|+++.
T Consensus        96 ---~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~  172 (254)
T d2gdza1          96 ---KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS  172 (254)
T ss_dssp             ---SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ---ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCC
Confidence               34788999999999999999999998764   48899999999999999999999999999999997  78899877


Q ss_pred             ccceeeeCCCccccccccc
Q psy5462         146 LWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       146 ~~~i~v~~~~~~~~~~~~~  164 (182)
                      ++.++..+|+++.|++.+.
T Consensus       173 gIrVN~I~PG~i~T~~~~~  191 (254)
T d2gdza1         173 GVRLNAICPGFVNTAILES  191 (254)
T ss_dssp             CEEEEEEEESCBSSHHHHG
T ss_pred             CEEEEEEEcCCCCChhhhh
Confidence            6666667999888887655

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.95  E-value=4.8e-28  Score=176.57  Aligned_cols=158  Identities=19%  Similarity=0.125  Sum_probs=131.1

Q ss_pred             cccccccccceeccCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      +.|.++|+.|....+..       .+.++++.+++||++++++++++++.+.+ ||++|++|||||.....++.+.+.++
T Consensus        23 ~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~  102 (241)
T d2a4ka1          23 DLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEA  102 (241)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccc
Confidence            46778888888776333       24578899999999999999999999999 99999999999998889999999999


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                      |+.++++|+.+++.+++++.|+|.++  +.|+++|+.+ ..+.+++..|+++|+|+++|+++||+|+++.++.++...|+
T Consensus       103 ~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a-~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG  179 (241)
T d2a4ka1         103 WEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVA-GLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG  179 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCT-TCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEEC
T ss_pred             cccccccccccccccccccccccccc--cceeeccccc-cccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccC
Confidence            99999999999999999999987653  4566555554 45557889999999999999999999999876777777888


Q ss_pred             ccccccccc
Q psy5462         156 RSVTILYQR  164 (182)
Q Consensus       156 ~~~~~~~~~  164 (182)
                      +..|++...
T Consensus       180 ~v~T~~~~~  188 (241)
T d2a4ka1         180 LIQTPMTAG  188 (241)
T ss_dssp             SBCCGGGTT
T ss_pred             cCCCHHHHh
Confidence            888876654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=1.3e-26  Score=169.67  Aligned_cols=158  Identities=16%  Similarity=0.110  Sum_probs=134.4

Q ss_pred             ccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh---cCCccEEEEcccCCCC-CCcccCCH
Q psy5462           7 TGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK---IGYVDILINNAGIVAS-SSVLAHTD   73 (182)
Q Consensus         7 ~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~id~li~~ag~~~~-~~~~~~~~   73 (182)
                      .++|+.|...++....         .+.++.++.||++|+++++++++.+.+   ++++|+||||||.... ..+.+.+.
T Consensus        26 a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~  105 (248)
T d1snya_          26 PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRS  105 (248)
T ss_dssp             SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCH
T ss_pred             HhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCH
Confidence            4678888877654432         246899999999999999999998743   6899999999998665 46788999


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhC-----------CCCeEEEEecccccc---ccCCCchhhhhHHHHHHHHHHHH
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLEN-----------NTGHIVCISSIAALT---AAVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~ii~iss~~~~~---~~~~~~~y~~sKaa~~~~~~~la  139 (182)
                      ++|+.++++|+.+++.++++++|+|+++           ++|++|+++|..+..   +.++..+|++||+|+.+|+++++
T Consensus       106 ~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la  185 (248)
T d1snya_         106 QELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLS  185 (248)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999864           468999999988764   45567799999999999999999


Q ss_pred             hhhCCCccceeeeCCCccccccccc
Q psy5462         140 CFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       140 ~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .|+++.++.+...+|+++.|++...
T Consensus       186 ~e~~~~gI~vn~v~PG~v~T~m~~~  210 (248)
T d1snya_         186 VDLYPQRIMCVSLHPGWVKTDMGGS  210 (248)
T ss_dssp             HHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             HHhCCCCeEEEEcCCCcccCCcccc
Confidence            9999877777778999999988754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.95  E-value=5.6e-28  Score=178.05  Aligned_cols=157  Identities=20%  Similarity=0.184  Sum_probs=135.9

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|.++|+.|.+....           +...+.+++++.||++|+++++++++.+.+ +|+||++|||||.....++.+.
T Consensus        24 ~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~  103 (259)
T d1ja9a_          24 IELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV  103 (259)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGC
T ss_pred             HHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccc
Confidence            4677889988765322           234577899999999999999999999999 9999999999999988999999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccc-ccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAA-LTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~-~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.++++++++++|+|+++  +++++++|..+ ..+.+.+..|+++|+|+.+|+|+||+|+++.++.++
T Consensus       104 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN  181 (259)
T d1ja9a_         104 TQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN  181 (259)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEe
Confidence            999999999999999999999999999764  67777766655 447889999999999999999999999998767777


Q ss_pred             eeCCCccccccc
Q psy5462         151 VTTPLRSVTILY  162 (182)
Q Consensus       151 v~~~~~~~~~~~  162 (182)
                      +++|++..|++.
T Consensus       182 ~I~PG~i~T~~~  193 (259)
T d1ja9a_         182 CIAPGGVKTDMF  193 (259)
T ss_dssp             EEEECCBSSHHH
T ss_pred             ccCcCCccChhh
Confidence            779998888764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.2e-27  Score=173.85  Aligned_cols=155  Identities=19%  Similarity=0.186  Sum_probs=130.7

Q ss_pred             cccccccccceeccCCCCC-CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.+.|+.|...++..+. ......++.||+++.      ++.+.+ ++++|++|||||....+++.+.+.++|+..++
T Consensus        22 ~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~   95 (234)
T d1o5ia_          22 DVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAID   95 (234)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhh
Confidence            5678889998888754321 112345678999864      344445 79999999999998888999999999999999


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccccc
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVTIL  161 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~  161 (182)
                      +|+.++++++|+++|+|++++.|+||+++|..+..+.+....|+++|+|+.+|+|++|.|+++.++.++..+|++..|++
T Consensus        96 ~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~  175 (234)
T d1o5ia_          96 SLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER  175 (234)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred             hhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhh
Confidence            99999999999999999998899999999999999999999999999999999999999999775666666888888876


Q ss_pred             ccc
Q psy5462         162 YQR  164 (182)
Q Consensus       162 ~~~  164 (182)
                      ...
T Consensus       176 ~~~  178 (234)
T d1o5ia_         176 VKE  178 (234)
T ss_dssp             HHH
T ss_pred             hhh
Confidence            544

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.94  E-value=1.8e-27  Score=174.75  Aligned_cols=153  Identities=25%  Similarity=0.234  Sum_probs=131.3

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCC-CHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCccc
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVS-DKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s-~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~   70 (182)
                      ++|+++|+.+.++.+..+           ..+.++.++.+|++ +.++++++++.+.+ +|+||+||||||..       
T Consensus        23 ~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~-------   95 (254)
T d1sbya1          23 RELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL-------   95 (254)
T ss_dssp             HHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC-------
T ss_pred             HHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC-------
Confidence            567888998888864432           23458999999998 67889999999999 99999999999963       


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC---CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN---TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                       +.+.|+.++++|+.++++++++++|+|.+++   .|+||++||..+..|.+++..|+++|+|+.+|+++|+.|+++.++
T Consensus        96 -~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gI  174 (254)
T d1sbya1          96 -DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGV  174 (254)
T ss_dssp             -CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSE
T ss_pred             -CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCe
Confidence             4567899999999999999999999998753   589999999999999999999999999999999999999987766


Q ss_pred             ceeeeCCCccccccccc
Q psy5462         148 GTTVTTPLRSVTILYQR  164 (182)
Q Consensus       148 ~i~v~~~~~~~~~~~~~  164 (182)
                      .+...+|+++.|++.+.
T Consensus       175 rVn~I~PG~v~T~~~~~  191 (254)
T d1sbya1         175 TAYSINPGITRTPLVHT  191 (254)
T ss_dssp             EEEEEEECSEESHHHHS
T ss_pred             EEEEEEeCCCcCccccc
Confidence            66777899888876543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.9e-28  Score=176.97  Aligned_cols=159  Identities=14%  Similarity=0.116  Sum_probs=131.0

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC----CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS----SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~----~~~~   69 (182)
                      ++|.++|+.|.+..+...         ..+.+..+++||++|+++++++++.+.+ ||++|++|||||....    ..+.
T Consensus        28 ~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~  107 (256)
T d1ulua_          28 AKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYI  107 (256)
T ss_dssp             HHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGG
T ss_pred             HHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchh
Confidence            567888999876653321         2245678899999999999999999999 9999999999998653    4567


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++.+++++.|+|++  .|+||++||..+..+.++...|+++|+|+.+|+|++|.|+++.++.+
T Consensus       108 ~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrV  185 (256)
T d1ulua_         108 DTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV  185 (256)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEE
Confidence            8899999999999999999999999998865  48999999999999999999999999999999999999999765566


Q ss_pred             eeeCCCccccccccc
Q psy5462         150 TVTTPLRSVTILYQR  164 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~  164 (182)
                      +..+|++..++....
T Consensus       186 N~I~PG~i~t~~~~~  200 (256)
T d1ulua_         186 NAISAGPVRTVAARS  200 (256)
T ss_dssp             EEEEECCC-------
T ss_pred             eeeccceeeeccccc
Confidence            666788777766554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=2.9e-26  Score=168.83  Aligned_cols=156  Identities=19%  Similarity=0.079  Sum_probs=131.2

Q ss_pred             ccccccceeccCCCC------------CCCceeEEEEccCCCHHHHHHHHHHHHh-c----CCccEEEEcccCCC---CC
Q psy5462           7 TGHIHGILFIPWCLP------------TKTHVAVYFKADVSDKAEIKKLNENVRK-I----GYVDILINNAGIVA---SS   66 (182)
Q Consensus         7 ~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~----~~id~li~~ag~~~---~~   66 (182)
                      ..+|+.|...++...            ..+.++.++.||++|+++++++++.+.+ .    +.+|++|||||...   .+
T Consensus        30 ~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~  109 (259)
T d1oaaa_          30 LSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKG  109 (259)
T ss_dssp             BCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSC
T ss_pred             ccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCC
Confidence            357888887764321            1356899999999999999999998876 2    46899999999764   35


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC--CCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN--TGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ++.+.++++|+.++++|+.++++++++++|+|++++  .|+||++||.++..+.+++..|+++|+|+.+|+++|+.|  .
T Consensus       110 ~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~  187 (259)
T d1oaaa_         110 FLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--E  187 (259)
T ss_dssp             GGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--C
T ss_pred             ccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC--C
Confidence            678899999999999999999999999999999875  589999999999999999999999999999999999999  3


Q ss_pred             CccceeeeCCCccccccccc
Q psy5462         145 MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       145 ~~~~i~v~~~~~~~~~~~~~  164 (182)
                      .++.++..+|+++.|++...
T Consensus       188 ~gIrVn~v~PG~i~T~~~~~  207 (259)
T d1oaaa_         188 PSVRVLSYAPGPLDNDMQQL  207 (259)
T ss_dssp             TTEEEEEEECCSBSSHHHHH
T ss_pred             CCCEEEEEEcCCCCCHHHHH
Confidence            34556666899888886543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-27  Score=176.97  Aligned_cols=158  Identities=22%  Similarity=0.194  Sum_probs=129.6

Q ss_pred             ccccc-cccceeccCCC----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCC
Q psy5462           5 RTTGH-IHGILFIPWCL----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         5 ~l~~~-g~~v~~~~~~~----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      +|+++ |+.|...++..          ...+.++.++.||++|.++++++++.+.+ +|+||+||||||...+..+.+.+
T Consensus        22 ~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~  101 (275)
T d1wmaa1          22 DLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPF  101 (275)
T ss_dssp             HHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCH
T ss_pred             HHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCC
Confidence            45554 67776665332          34567899999999999999999999999 99999999999998887888888


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----------------------------------
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----------------------------------  118 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----------------------------------  118 (182)
                      .++|+.++++|+.+++++++.++|+|++  .|+||++||..+..+.                                  
T Consensus       102 ~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~  179 (275)
T d1wmaa1         102 HIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK  179 (275)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccc
Confidence            8999999999999999999999999965  4899999997664321                                  


Q ss_pred             -------CCCchhhhhHHHHHHHHHHHHhhhCC----CccceeeeCCCccccccccc
Q psy5462         119 -------VNVSAYFASKYGVTENHPSIKCFSGY----MLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       119 -------~~~~~y~~sKaa~~~~~~~la~e~~~----~~~~i~v~~~~~~~~~~~~~  164 (182)
                             .+...|++||+++..|++.+++|++.    ..+.++..+|+++.|++...
T Consensus       180 ~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~  236 (275)
T d1wmaa1         180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  236 (275)
T ss_dssp             TCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC
Confidence                   12357999999999999999999874    23455556899988887654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.93  E-value=2.2e-26  Score=170.61  Aligned_cols=158  Identities=20%  Similarity=0.190  Sum_probs=136.7

Q ss_pred             cccccccccceeccCC-----------CCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWC-----------LPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----------~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|.+.+..           +...+.++.++.||++|++++.++++.+.+ +|++|++|||+|.....++.+.
T Consensus        36 ~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~  115 (272)
T d1g0oa_          36 MELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV  115 (272)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGC
T ss_pred             HHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhh
Confidence            4677889888776533           224567899999999999999999999999 9999999999999988899999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-ccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-AAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|+..+++|+.+++.+++++.|+|.+  .+++++++|..+.. +.+....|+++|+|+.+|+|++|.|+++.++.++
T Consensus       116 ~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN  193 (272)
T d1g0oa_         116 TPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVN  193 (272)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEE
Confidence            99999999999999999999999999976  47888888876544 5677788999999999999999999997766667


Q ss_pred             eeCCCcccccccc
Q psy5462         151 VTTPLRSVTILYQ  163 (182)
Q Consensus       151 v~~~~~~~~~~~~  163 (182)
                      .++|+++.|++..
T Consensus       194 ~I~PG~v~T~~~~  206 (272)
T d1g0oa_         194 VVAPGGIKTDMYH  206 (272)
T ss_dssp             EEEECCBSSHHHH
T ss_pred             EEccCCcCChHHH
Confidence            7788888887653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.2e-26  Score=168.78  Aligned_cols=159  Identities=21%  Similarity=0.178  Sum_probs=139.8

Q ss_pred             cccccccccceeccCCCC-----------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|+++|+.|...++..+           ..+..+..+.+|+++.+.+..+++.+.+ +|.+|++|+|||......+.+.
T Consensus        32 ~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~  111 (269)
T d1xu9a_          32 YHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD  111 (269)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCS
T ss_pred             HHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccC
Confidence            567888999888875432           3467889999999999999999999999 9999999999999888888999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTV  151 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v  151 (182)
                      +.++|+.++++|+.+++.+++.++|+|+++ +|+||++||.++..+.+....|++||+|+.+|+++|+.|++....+|+|
T Consensus       112 ~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V  190 (269)
T d1xu9a_         112 DIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSI  190 (269)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEE
Confidence            999999999999999999999999999754 6999999999999999999999999999999999999999754445554


Q ss_pred             --eCCCcccccccc
Q psy5462         152 --TTPLRSVTILYQ  163 (182)
Q Consensus       152 --~~~~~~~~~~~~  163 (182)
                        .+|+++.|++..
T Consensus       191 ~~v~PG~v~T~~~~  204 (269)
T d1xu9a_         191 TLCVLGLIDTETAM  204 (269)
T ss_dssp             EEEEECCBCCHHHH
T ss_pred             EEEecCcCCCcHHH
Confidence              588888887653

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-25  Score=162.85  Aligned_cols=157  Identities=23%  Similarity=0.219  Sum_probs=131.5

Q ss_pred             cccccccccceeccCCCC-----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP-----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +.|+++|+.|...++..+     .....+....+|+.+.+.++...+.   ++++|++|||||....+++.+.+.++|+.
T Consensus        24 ~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~id~lVn~ag~~~~~~~~~~~~~~~~~  100 (245)
T d2ag5a1          24 LAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE---VERLDVLFNVAGFVHHGTVLDCEEKDWDF  100 (245)
T ss_dssp             HHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH---CSCCSEEEECCCCCCCBCGGGCCHHHHHH
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccc---cccceeEEecccccCCCChhhCCHHHHHH
Confidence            567788998888874321     1234577888999988776665444   58999999999999888999999999999


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc-cccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL-TAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .+++|+.+++.+++++.|+|.+++.|+||+++|..+. .+.+...+|+++|+|+.+|+|+||.|+++.++.++..+|++.
T Consensus       101 ~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i  180 (245)
T d2ag5a1         101 SMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTV  180 (245)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCE
T ss_pred             HHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeecee
Confidence            9999999999999999999999989999999998764 577888999999999999999999999976555555688877


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|++..
T Consensus       181 ~T~~~~  186 (245)
T d2ag5a1         181 DTPSLQ  186 (245)
T ss_dssp             ECHHHH
T ss_pred             echhhH
Confidence            776654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=2.8e-25  Score=162.67  Aligned_cols=161  Identities=19%  Similarity=0.127  Sum_probs=124.5

Q ss_pred             cccccccccceec--cCCC-------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCC--ccEEEEcccCCCC-CCccc
Q psy5462           4 DRTTGHIHGILFI--PWCL-------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGY--VDILINNAGIVAS-SSVLA   70 (182)
Q Consensus         4 ~~l~~~g~~v~~~--~~~~-------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~--id~li~~ag~~~~-~~~~~   70 (182)
                      ++|+++|+.+.++  .+..       ...+.+++++.||++|.++++++++.+.+ ++.  +|++|||||...+ .++.+
T Consensus        21 ~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~  100 (250)
T d1yo6a1          21 QQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTE  100 (250)
T ss_dssp             HHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSC
T ss_pred             HHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCcccc
Confidence            4567778753333  3222       12456899999999999999999999988 764  9999999998654 67788


Q ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-----------CCeEEEEeccccccc-------cCCCchhhhhHHHHH
Q psy5462          71 HTDHEIERIMDVNLMSNIKMVREFLPDMLENN-----------TGHIVCISSIAALTA-------AVNVSAYFASKYGVT  132 (182)
Q Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~~~ii~iss~~~~~~-------~~~~~~y~~sKaa~~  132 (182)
                      .+.++|+..+++|+.|+++++++++|+|++++           .++++++++..+..+       ..+..+|++||+|+.
T Consensus       101 ~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~  180 (250)
T d1yo6a1         101 PNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN  180 (250)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHHHH
Confidence            89999999999999999999999999998642           378999888665432       233467999999999


Q ss_pred             HHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         133 ENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       133 ~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +|+++|+.|+++.++.+...+|+++.|++...
T Consensus       181 ~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~  212 (250)
T d1yo6a1         181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             HHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCCCCCCCC
Confidence            99999999999776677777899999987644

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.8e-25  Score=161.38  Aligned_cols=158  Identities=15%  Similarity=0.064  Sum_probs=133.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cC--CccEEEEcccCCCC-CCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IG--YVDILINNAGIVAS-SSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~--~id~li~~ag~~~~-~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..++............+.+|.++.++++.+.+.+.+ ++  ++|++|||||.... ..+.+.+.++|+.+
T Consensus        20 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~   99 (236)
T d1dhra_          20 QAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLM   99 (236)
T ss_dssp             HHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHH
T ss_pred             HHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHH
Confidence            5678899999888776666667778889999999999998888777 54  69999999997554 44566778999999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCC--ccceeeeCCCcc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYM--LWGTTVTTPLRS  157 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~--~~~i~v~~~~~~  157 (182)
                      +++|+.++++++++++|+|++  +|+||++||.++..+.+....|++||+|+.+|+++|+.|++..  ++.+...+|++.
T Consensus       100 ~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v  177 (236)
T d1dhra_         100 WKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL  177 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred             HHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccC
Confidence            999999999999999999965  5899999999999999999999999999999999999999843  344444578888


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|++..
T Consensus       178 ~T~~~~  183 (236)
T d1dhra_         178 DTPMNR  183 (236)
T ss_dssp             ECHHHH
T ss_pred             cCCcch
Confidence            887654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.92  E-value=4.2e-25  Score=160.34  Aligned_cols=158  Identities=12%  Similarity=0.042  Sum_probs=132.4

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh---cCCccEEEEcccCCCCC-CcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK---IGYVDILINNAGIVASS-SVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~~~id~li~~ag~~~~~-~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..++..............+|+.+.+......+.+..   +++||+||||||..... ++.+.+.++|+.+
T Consensus        20 ~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~   99 (235)
T d1ooea_          20 EFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLM   99 (235)
T ss_dssp             HHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhH
Confidence            5678899999999887766667777888999998888877766655   57899999999976553 4455566889999


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeee--CCCcc
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVT--TPLRS  157 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~--~~~~~  157 (182)
                      +++|+.+++.++++++|+|++  +|+||++||..+..+.++...|+++|+|+.+|+++|+.|++....+|+|+  +|+..
T Consensus       100 ~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~  177 (235)
T d1ooea_         100 IKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL  177 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred             hhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence            999999999999999999965  48999999999999999999999999999999999999998545566665  77777


Q ss_pred             cccccc
Q psy5462         158 VTILYQ  163 (182)
Q Consensus       158 ~~~~~~  163 (182)
                      .|++..
T Consensus       178 ~T~~~~  183 (235)
T d1ooea_         178 DTPMNR  183 (235)
T ss_dssp             CCHHHH
T ss_pred             cCcchh
Confidence            776543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.90  E-value=1.6e-23  Score=156.55  Aligned_cols=161  Identities=17%  Similarity=0.070  Sum_probs=135.8

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~   71 (182)
                      ++|++.|+.|...++..           ...+.++.++.||++++++++++++.+.+ ++++|++|||||.....++...
T Consensus        43 ~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~  122 (294)
T d1w6ua_          43 TLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERL  122 (294)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGC
T ss_pred             HHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccc
Confidence            56788899988887432           12367889999999999999999999999 9999999999999888889999


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCcccee
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLEN-NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTT  150 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~  150 (182)
                      +.++|...+.+|..+.+.+.+...+.+... ..+.+++++|..+..+.+....|+++|+|+.+|+|++|.|+++.++.++
T Consensus       123 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN  202 (294)
T d1w6ua_         123 SPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN  202 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence            999999999999999999988887777654 4678888888888888899999999999999999999999997766666


Q ss_pred             eeCCCccccccccc
Q psy5462         151 VTTPLRSVTILYQR  164 (182)
Q Consensus       151 v~~~~~~~~~~~~~  164 (182)
                      .++|+++.|+....
T Consensus       203 ~I~PG~i~T~~~~~  216 (294)
T d1w6ua_         203 VIQPGPIKTKGAFS  216 (294)
T ss_dssp             EEEECCBCC-----
T ss_pred             EEccCccccchhhh
Confidence            66888888776543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.90  E-value=4e-23  Score=153.52  Aligned_cols=133  Identities=15%  Similarity=0.109  Sum_probs=104.7

Q ss_pred             eeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHH--------------HHHHHHhHHHHHH
Q psy5462          26 VAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIE--------------RIMDVNLMSNIKM   90 (182)
Q Consensus        26 ~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l   90 (182)
                      .+..+.+|+++.++++++++.+.+ ||+||+||||||...+.++.+.+.++|+              ..+.+|+.+++++
T Consensus        71 ~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~  150 (284)
T d1e7wa_          71 SGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL  150 (284)
T ss_dssp             C----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeee
Confidence            445567889999999999999999 9999999999999888777766655544              5789999999999


Q ss_pred             HHHHhHHHH------hCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          91 VREFLPDML------ENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        91 ~~~~~~~l~------~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ++.+.+.+.      +.+.++||+++|.....+.++..+|+++|+|+.+|++++|.|+++.++.++..+|++..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~  224 (284)
T d1e7wa_         151 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV  224 (284)
T ss_dssp             HHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             eccccchhhhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccc
Confidence            999988754      33468999999999888999999999999999999999999999764445555666533

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.4e-23  Score=150.66  Aligned_cols=161  Identities=25%  Similarity=0.288  Sum_probs=135.4

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC------CCcc
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS------SSVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~------~~~~   69 (182)
                      ++|.++|+.|...++....       .+.+...+.+|+.+.+.++...+.+.. ++.+|.+++|++....      .++.
T Consensus        23 ~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (248)
T d2o23a1          23 ERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQ  102 (248)
T ss_dssp             HHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTE
T ss_pred             HHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccCCCcccccccc
Confidence            5688899999888755432       256788999999999999999999888 8899999999876543      3456


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC------CCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLEN------NTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      +.+.++|+.++++|+.+++++++++.|+|..+      ++|+||++||..+..+.++..+|+++|+|+.+|+|+|+.|++
T Consensus       103 ~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~~  182 (248)
T d2o23a1         103 THTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA  182 (248)
T ss_dssp             ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            67889999999999999999999999998754      468999999999999999999999999999999999999999


Q ss_pred             CCccceeeeCCCccccccccc
Q psy5462         144 YMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       144 ~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.++.++..+|++..|++...
T Consensus       183 ~~gIrvN~I~PG~i~T~~~~~  203 (248)
T d2o23a1         183 PIGIRVMTIAPGLFGTPLLTS  203 (248)
T ss_dssp             GGTEEEEEEEECCBCCC----
T ss_pred             ccCcceeeeccCceecchhhc
Confidence            776666666888888877654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.87  E-value=8.4e-23  Score=154.92  Aligned_cols=127  Identities=9%  Similarity=0.118  Sum_probs=110.4

Q ss_pred             EccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEE
Q psy5462          31 KADVSDKAEIKKLNENVRK-IGYVDILINNAGIVAS--SSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIV  107 (182)
Q Consensus        31 ~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii  107 (182)
                      .+|+++.++++++++.+.+ ||+||++|||+|....  +++.+.+.++|+..+++|+++++.++|++.|+|++  .|+||
T Consensus        91 ~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~--~GsIv  168 (329)
T d1uh5a_          91 RYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--QSSII  168 (329)
T ss_dssp             HHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEE
T ss_pred             hhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc--ccccc
Confidence            3477788899999999999 9999999999997653  57889999999999999999999999999999965  58999


Q ss_pred             EEeccccccccCC-CchhhhhHHHHHHHHHHHHhhhCC-CccceeeeCCCcccc
Q psy5462         108 CISSIAALTAAVN-VSAYFASKYGVTENHPSIKCFSGY-MLWGTTVTTPLRSVT  159 (182)
Q Consensus       108 ~iss~~~~~~~~~-~~~y~~sKaa~~~~~~~la~e~~~-~~~~i~v~~~~~~~~  159 (182)
                      ++||.++..+.|+ ...|+++|+++++|+|+||.||++ .++.++.++|+++.|
T Consensus       169 ~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         169 SLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             cceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            9999998887776 467999999999999999999985 445555558887777

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=1.8e-20  Score=135.79  Aligned_cols=160  Identities=19%  Similarity=0.164  Sum_probs=129.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCC----CCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVAS----SSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|...+...  .+.+...+.+|+++......+.+........+.++.+++....    ......+.+.|+..
T Consensus        19 ~~la~~Ga~V~i~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (241)
T d1uaya_          19 LALKARGYRVVVLDLRR--EGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRV   96 (241)
T ss_dssp             HHHHHHTCEEEEEESSC--CSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHH
T ss_pred             HHHHHCCCEEEEEECCc--ccccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHH
Confidence            56788999988887543  4567788999999999999998887773334555555554332    34456788999999


Q ss_pred             HHHHhHHHHHHHHHHhHHH------HhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeC
Q psy5462          80 MDVNLMSNIKMVREFLPDM------LENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTT  153 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l------~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~  153 (182)
                      +++|+.+++.+++.+.+.+      .+++.|+||++||..+..+.++...|+++|+|+.+|+|+||.|+++.++.++.++
T Consensus        97 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~  176 (241)
T d1uaya_          97 LEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVA  176 (241)
T ss_dssp             HHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeec
Confidence            9999999999999999984      4456799999999999999999999999999999999999999997766666668


Q ss_pred             CCcccccccccc
Q psy5462         154 PLRSVTILYQRS  165 (182)
Q Consensus       154 ~~~~~~~~~~~~  165 (182)
                      |++..|+.....
T Consensus       177 PG~i~T~~~~~~  188 (241)
T d1uaya_         177 PGLFDTPLLQGL  188 (241)
T ss_dssp             ECSCSSHHHHTS
T ss_pred             CCcccccccchh
Confidence            888888776553

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.83  E-value=5.4e-21  Score=140.29  Aligned_cols=146  Identities=14%  Similarity=0.054  Sum_probs=120.2

Q ss_pred             ccccccccc-ceeccC-------------CCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcc
Q psy5462           4 DRTTGHIHG-ILFIPW-------------CLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVL   69 (182)
Q Consensus         4 ~~l~~~g~~-v~~~~~-------------~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~   69 (182)
                      ++|.++|+. +..+.+             ++...+.++.++.||++|+++++++++.+.+.+++|++|||+|.....++.
T Consensus        27 ~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~  106 (259)
T d2fr1a1          27 RWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVD  106 (259)
T ss_dssp             HHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGG
T ss_pred             HHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccccccccccccccccccc
Confidence            456777875 333321             112356789999999999999999999887755799999999999999999


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      +.+.++|+..+++|+.+++++.+++    ...+.++||++||.++..+.++...|+++|+++++|++.++.+    +.++
T Consensus       107 ~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~~~~----Gi~v  178 (259)
T d2fr1a1         107 TLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSD----GLPA  178 (259)
T ss_dssp             GCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHHHT----TCCC
T ss_pred             cccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHHHHhC----CCCE
Confidence            9999999999999999999988865    3456789999999999999999999999999999998888766    3455


Q ss_pred             eeeCCCcc
Q psy5462         150 TVTTPLRS  157 (182)
Q Consensus       150 ~v~~~~~~  157 (182)
                      ...+|++.
T Consensus       179 ~~I~pg~~  186 (259)
T d2fr1a1         179 TAVAWGTW  186 (259)
T ss_dssp             EEEEECCB
T ss_pred             EECCCCcc
Confidence            66666643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=2.3e-20  Score=136.69  Aligned_cols=160  Identities=13%  Similarity=0.055  Sum_probs=134.0

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCc-----
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSV-----   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~-----   68 (182)
                      +.|++.|+.|...+....         ....+...+.+|+++..++...++.+.+ ++++|++|||++......+     
T Consensus        25 ~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~  104 (258)
T d1qsga_          25 QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV  104 (258)
T ss_dssp             HHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHH
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEEEeeccccccccccccc
Confidence            467788999887765422         1235678899999999999999999999 9999999999988654332     


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccc
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~  148 (182)
                      .....+.|...+++|+.+.+.+++++.+.+.+  ++.||++||..+..+.|....|+++|+|+.+|++++|.|+++.++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIr  182 (258)
T d1qsga_         105 NAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR  182 (258)
T ss_dssp             HHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCce
Confidence            34567889999999999999999999998754  4689999999998899999999999999999999999999987666


Q ss_pred             eeeeCCCcccccccccc
Q psy5462         149 TTVTTPLRSVTILYQRS  165 (182)
Q Consensus       149 i~v~~~~~~~~~~~~~~  165 (182)
                      ++..+|++..|+.....
T Consensus       183 VN~I~PG~i~T~~~~~~  199 (258)
T d1qsga_         183 VNAISAGPIRTLAASGI  199 (258)
T ss_dssp             EEEEEECCCCCTTGGGS
T ss_pred             eeccccccccccccccc
Confidence            66678998888877653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.78  E-value=1e-18  Score=128.48  Aligned_cols=157  Identities=11%  Similarity=0.105  Sum_probs=125.9

Q ss_pred             cccccccccceeccCCC--------CCCCceeEEEEccCCCHHHHHHHHHHHHh-c---CCccEEEEcccCCCC-----C
Q psy5462           4 DRTTGHIHGILFIPWCL--------PTKTHVAVYFKADVSDKAEIKKLNENVRK-I---GYVDILINNAGIVAS-----S   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~--------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~---~~id~li~~ag~~~~-----~   66 (182)
                      ++|++.|+.+.......        +..+.+...+.||++++++++.+++.+.+ +   +++|++|||+|....     .
T Consensus        26 ~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~  105 (268)
T d2h7ma1          26 RVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGIN  105 (268)
T ss_dssp             HHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTS
T ss_pred             HHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccc
Confidence            46778888887664221        34567788999999999999999998876 5   579999999997642     3


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCc
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYML  146 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~  146 (182)
                      ++.+.+.++|...+.+|+.+.+...+...+.+.   .+.+++++|.....+.|....|+++|+++.+|+++++.|+++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~g  182 (268)
T d2h7ma1         106 PFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG  182 (268)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccchhhccccchhhccccchhhhhccC
Confidence            567788999999999999999999998877543   24556666666677788899999999999999999999999776


Q ss_pred             cceeeeCCCcccccccc
Q psy5462         147 WGTTVTTPLRSVTILYQ  163 (182)
Q Consensus       147 ~~i~v~~~~~~~~~~~~  163 (182)
                      +.++..+|++..|+...
T Consensus       183 IrVN~V~PG~v~T~~~~  199 (268)
T d2h7ma1         183 VRSNLVAAGPIRTLAMS  199 (268)
T ss_dssp             CEEEEEEECCCCCHHHH
T ss_pred             CcceEEecCCCCChhhh
Confidence            66666688888877653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.78  E-value=2.3e-18  Score=126.32  Aligned_cols=161  Identities=14%  Similarity=0.087  Sum_probs=123.1

Q ss_pred             cccccccccceeccCCCC------------CCCceeEEEEccCCC----HHHHHHHHHHHHh-cCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP------------TKTHVAVYFKADVSD----KAEIKKLNENVRK-IGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~------------~~~~~~~~~~~D~s~----~~~~~~~~~~~~~-~~~id~li~~ag~~~~~   66 (182)
                      ++|+++|+.|...+....            ..+.+...+.+|+.+    .+.++++++.+.+ ||++|++|||||...+.
T Consensus        19 ~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~   98 (266)
T d1mxha_          19 VRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPT   98 (266)
T ss_dssp             HHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred             HHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCCC
Confidence            568889999988875532            124567777665543    6778888998888 99999999999987765


Q ss_pred             Cccc-----------CCHHHHHHHHHHHhHHHHHHHHHHhHHHHhC-----CCCeEEEEeccccccccCCCchhhhhHHH
Q psy5462          67 SVLA-----------HTDHEIERIMDVNLMSNIKMVREFLPDMLEN-----NTGHIVCISSIAALTAAVNVSAYFASKYG  130 (182)
Q Consensus        67 ~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~iss~~~~~~~~~~~~y~~sKaa  130 (182)
                      ++.+           .....+...+..|+.+.+...+...+.+...     ..+.++++++..+..+.+++..|++||++
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa  178 (266)
T d1mxha_          99 PLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHA  178 (266)
T ss_dssp             CSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             cccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccccCcchhhhhhhHHH
Confidence            4432           2345577888899999999998888876542     35788889999988899999999999999


Q ss_pred             HHHHHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         131 VTENHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       131 ~~~~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      +.+|++++|.|+++.++.++..+|++..++....
T Consensus       179 l~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         179 LGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred             HhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence            9999999999999765555555787766655443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.76  E-value=2e-18  Score=127.28  Aligned_cols=161  Identities=14%  Similarity=0.175  Sum_probs=121.6

Q ss_pred             cccccccccceeccCCCC---------CCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCC----Ccc
Q psy5462           4 DRTTGHIHGILFIPWCLP---------TKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASS----SVL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~----~~~   69 (182)
                      ++|+++|+.|.+.++...         +.+....++.+|+++++++.++++.+.+ +|++|++|||+|.....    ...
T Consensus        25 ~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~  104 (274)
T d2pd4a1          25 QSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL  104 (274)
T ss_dssp             HHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGG
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccc
Confidence            568889999998875432         2245678899999999999999999999 99999999999987643    233


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccce
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGT  149 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i  149 (182)
                      ....+.+...+.++..+...+.+...+..  +..+.|+++++.+...+.+....|+++|+++.+++++++.|+++.++.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrv  182 (274)
T d2pd4a1         105 ETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV  182 (274)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             cccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhcCcCcee
Confidence            34555566666666666666666555432  2235566677777677778889999999999999999999999876677


Q ss_pred             eeeCCCcccccccccch
Q psy5462         150 TVTTPLRSVTILYQRSV  166 (182)
Q Consensus       150 ~v~~~~~~~~~~~~~~~  166 (182)
                      +..+|++..|+......
T Consensus       183 N~I~PG~v~T~~~~~~~  199 (274)
T d2pd4a1         183 NALSAGPIRTLASSGIA  199 (274)
T ss_dssp             EEEEECCCCCTTGGGST
T ss_pred             cccccCcccCccccccC
Confidence            77788888887765543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.75  E-value=1e-18  Score=130.18  Aligned_cols=129  Identities=16%  Similarity=0.146  Sum_probs=106.1

Q ss_pred             CCHHHHHHHHHHHHh-cCCccEEEEcccCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEec
Q psy5462          35 SDKAEIKKLNENVRK-IGYVDILINNAGIVA--SSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISS  111 (182)
Q Consensus        35 s~~~~~~~~~~~~~~-~~~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss  111 (182)
                      ++..+++++++.+.+ ||+||++|||||...  ..++.+.+.++|+..+++|+.+++.+++++.+.+.++  +.++++++
T Consensus       101 ~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--g~~~~~~~  178 (297)
T d1d7oa_         101 SSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPG--GASISLTY  178 (297)
T ss_dssp             CCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcC--Ccceeeee
Confidence            556677889999999 999999999999864  4678899999999999999999999999999987654  55666666


Q ss_pred             cccc-cccCCCchhhhhHHHHHHHHHHHHhhhC-CCccceeeeCCCcccccccccc
Q psy5462         112 IAAL-TAAVNVSAYFASKYGVTENHPSIKCFSG-YMLWGTTVTTPLRSVTILYQRS  165 (182)
Q Consensus       112 ~~~~-~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~~~~i~v~~~~~~~~~~~~~~  165 (182)
                      .+.. ...+....|+++|+++..+++.++.|++ +.++.++..+|++..|+.....
T Consensus       179 ~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~  234 (297)
T d1d7oa_         179 IASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             GGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             hhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence            5543 3456778999999999999999999996 4555666668888888877653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.54  E-value=4e-14  Score=102.85  Aligned_cols=147  Identities=22%  Similarity=0.153  Sum_probs=104.5

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh--cCCccEEEEcccCCCCCCcccCCHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK--IGYVDILINNAGIVASSSVLAHTDHEIERIMD   81 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~   81 (182)
                      ++|.+.|+.|...+....+       ..+|+++.+..+.....+..  .+.+|++|+|||.....       +.|.....
T Consensus        19 ~~la~~Ga~V~~~~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~-------~~~~~~~~   84 (257)
T d1fjha_          19 KVLEAAGHQIVGIDIRDAE-------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-------KVLGNVVS   84 (257)
T ss_dssp             HHHHHTTCEEEEEESSSSS-------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC-------SSHHHHHH
T ss_pred             HHHHHCCCEEEEEECChHH-------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH-------HHHHHHHH
Confidence            5678889998887754321       36799999999887665554  56799999999875432       33667788


Q ss_pred             HHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccc---------------------------cc-cCCCchhhhhHHHHHH
Q psy5462          82 VNLMSNIKMVREFLPDMLENNTGHIVCISSIAAL---------------------------TA-AVNVSAYFASKYGVTE  133 (182)
Q Consensus        82 ~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~---------------------------~~-~~~~~~y~~sKaa~~~  133 (182)
                      +|..+...+.+...+.+.+.....+.++++....                           .+ .++...|+++|+|+.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~  164 (257)
T d1fjha_          85 VNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTV  164 (257)
T ss_dssp             HHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhc
Confidence            9999999999999998887666666666553321                           11 1123579999999999


Q ss_pred             HHHHHHhhhCCCccceeeeCCCccccccccc
Q psy5462         134 NHPSIKCFSGYMLWGTTVTTPLRSVTILYQR  164 (182)
Q Consensus       134 ~~~~la~e~~~~~~~i~v~~~~~~~~~~~~~  164 (182)
                      |+|++|.|+++.++.++..+|++..|+....
T Consensus       165 ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~  195 (257)
T d1fjha_         165 AVRKRAAAWGEAGVRLNTIAPGATETPLLQA  195 (257)
T ss_dssp             HHHHTHHHHHHTTCEEEEEEECC--------
T ss_pred             cccccccccccccccccccccCCcCChhHHh
Confidence            9999999999776666666888888877654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=1e-11  Score=94.08  Aligned_cols=141  Identities=13%  Similarity=-0.009  Sum_probs=102.2

Q ss_pred             cccccccccceeccCCC---------------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCL---------------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..+++..               .....++.++.+|++|.+++.++++.+    .+|+++|+|+...... 
T Consensus        19 ~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~d~v~h~aa~~~~~~-   93 (357)
T d1db3a_          19 EFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----QPDEVYNLGAMSHVAV-   93 (357)
T ss_dssp             HHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----CCSEEEECCCCCTTTT-
T ss_pred             HHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----CCCEEEEeecccccch-
Confidence            56778899988777532               123468899999999999999999886    5899999999865432 


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~  137 (182)
                         +.++....+++|+.|+.++++++...-. ++..++|++||...+-           +..+...|+.+|.+.+.+++.
T Consensus        94 ---~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~  169 (357)
T d1db3a_          94 ---SFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN  169 (357)
T ss_dssp             ---TTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ---hhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence               2344556789999999999999864321 2345799999876431           112357899999999999999


Q ss_pred             HHhhhCCCccceeeeCCCc
Q psy5462         138 IKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~  156 (182)
                      +++..+-   ++.+..|..
T Consensus       170 ~~~~~~l---~~~ilR~~~  185 (357)
T d1db3a_         170 YRESYGM---YACNGILFN  185 (357)
T ss_dssp             HHHHHCC---CEEEEEECC
T ss_pred             HHHHhCC---CEEEEEecc
Confidence            9988653   445555543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.23  E-value=6.3e-11  Score=88.95  Aligned_cols=138  Identities=14%  Similarity=0.180  Sum_probs=101.2

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.|..++.....           ...++.++++|++|.+.+.++++..    ++|+|||+|+.....    .+
T Consensus        18 ~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d~ViHlAa~~~~~----~~   89 (338)
T d1udca_          18 VQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH----AIDTVIHFAGLKAVG----ES   89 (338)
T ss_dssp             HHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT----TCSEEEECCSCCCHH----HH
T ss_pred             HHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc----CCCEEEECCCccchh----hH
Confidence            4677889999888643322           1347899999999999999998874    599999999964321    13


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------CCCchhhhhHHHHHHHHHHHHh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------VNVSAYFASKYGVTENHPSIKC  140 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------~~~~~y~~sKaa~~~~~~~la~  140 (182)
                      .++....+++|+.++.++++++...    +-.++|++||...+.+.            .+...|+.+|.+.+.+++....
T Consensus        90 ~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~  165 (338)
T d1udca_          90 VQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQK  165 (338)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             HhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHh
Confidence            3445678999999999999988643    44689999987755221            2367899999999999998777


Q ss_pred             hhCCCccceeeeCCC
Q psy5462         141 FSGYMLWGTTVTTPL  155 (182)
Q Consensus       141 e~~~~~~~i~v~~~~  155 (182)
                      +..  ..++.+..|.
T Consensus       166 ~~~--~~~~~ilR~~  178 (338)
T d1udca_         166 AQP--DWSIALLRYF  178 (338)
T ss_dssp             HST--TCEEEEEEEC
T ss_pred             hcc--CCeEEEEeec
Confidence            743  2344444443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.19  E-value=1e-10  Score=88.61  Aligned_cols=144  Identities=16%  Similarity=0.067  Sum_probs=101.1

Q ss_pred             cccccccccceeccCCC---------C--CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL---------P--TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~---------~--~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+.......         .  ....++.++.+|++|.+.+.++++..    .+|+|||+|+......    +
T Consensus        18 ~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~----~~d~VihlAa~~~~~~----~   89 (361)
T d1kewa_          18 RHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY----QPDAVMHLAAESHVDR----S   89 (361)
T ss_dssp             HHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHHH----H
T ss_pred             HHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC----CCCEEEECccccchhh----H
Confidence            45667787754432111         1  22458899999999999999998875    5999999998753221    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhC-----CCCeEEEEeccccccc---------------------cCCCchhhh
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLEN-----NTGHIVCISSIAALTA---------------------AVNVSAYFA  126 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~iss~~~~~~---------------------~~~~~~y~~  126 (182)
                      .++....+++|+.++.++.+++.......     +..++|++||...+..                     ..+...|+.
T Consensus        90 ~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~  169 (361)
T d1kewa_          90 ITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSA  169 (361)
T ss_dssp             HHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHH
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHH
Confidence            34445678999999999999998765432     2358999999775421                     113467999


Q ss_pred             hHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         127 SKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       127 sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      +|.+.+.+++.++...+-   ++.+..|..+.
T Consensus       170 sK~~~E~~~~~~~~~~~i---~~~~lR~~~vy  198 (361)
T d1kewa_         170 SKASSDHLVRAWRRTYGL---PTIVTNCSNNY  198 (361)
T ss_dssp             HHHHHHHHHHHHHHHHCC---CEEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHHhCC---CEEEEecCceE
Confidence            999999999999988642   44445454433

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.01  E-value=1.3e-09  Score=81.78  Aligned_cols=127  Identities=14%  Similarity=0.157  Sum_probs=94.9

Q ss_pred             cccccccccceeccCCCCC-----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPT-----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|+++|+.|..++.....           ...++.++.+|++|.+.++.+++..    ++|+|||+|+......    .
T Consensus        19 ~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~d~VihlAa~~~~~~----~   90 (347)
T d1z45a2          19 VELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY----KIDSVIHFAGLKAVGE----S   90 (347)
T ss_dssp             HHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS----CCCEEEECCSCCCHHH----H
T ss_pred             HHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc----CCCEEEEccccccccc----c
Confidence            4678889999887643221           1357889999999999999988764    6999999999764321    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc---------------cCCCchhhhhHHHHHHHHHH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA---------------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~---------------~~~~~~y~~sKaa~~~~~~~  137 (182)
                      .+.....+.+|+.++.++..++..    .+..++|++||...+..               ..+...|+.+|.+.+.+++.
T Consensus        91 ~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~  166 (347)
T d1z45a2          91 TQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILND  166 (347)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHH
Confidence            334456788999999999999854    34458999999765421               11346899999999999999


Q ss_pred             HHhhh
Q psy5462         138 IKCFS  142 (182)
Q Consensus       138 la~e~  142 (182)
                      +....
T Consensus       167 ~~~~~  171 (347)
T d1z45a2         167 LYNSD  171 (347)
T ss_dssp             HHHHS
T ss_pred             HHHhh
Confidence            87653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=2.4e-09  Score=80.08  Aligned_cols=131  Identities=12%  Similarity=-0.065  Sum_probs=94.7

Q ss_pred             cccccccccceeccCCCC----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      ++|.++|+.|..+++...                ....++.++.+|++|.+.+.++++..    .+++++|.++......
T Consensus        19 ~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~~v~~~~a~~~~~~   94 (347)
T d1t2aa_          19 EFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV----KPTEIYNLGAQSHVKI   94 (347)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHHH
T ss_pred             HHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc----ccceeeeeeeccccch
Confidence            457788999888775321                11246889999999999999999886    5888998887643321


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~  136 (182)
                          +.+.....+++|+.++.+++.++..+-. .+..++|++||.+.+-           +..+...|+.+|.+.+.+++
T Consensus        95 ----~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~  169 (347)
T d1t2aa_          95 ----SFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV  169 (347)
T ss_dssp             ----HHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ----hhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence                3444556789999999999998865422 1235899999876431           11235689999999999999


Q ss_pred             HHHhhhC
Q psy5462         137 SIKCFSG  143 (182)
Q Consensus       137 ~la~e~~  143 (182)
                      .++....
T Consensus       170 ~~~~~~~  176 (347)
T d1t2aa_         170 NFREAYN  176 (347)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9988754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.99  E-value=9e-09  Score=78.36  Aligned_cols=133  Identities=10%  Similarity=0.023  Sum_probs=96.7

Q ss_pred             cccccccccceeccC-------------CCCC--------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEE
Q psy5462           4 DRTTGHIHGILFIPW-------------CLPT--------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDIL   56 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~-------------~~~~--------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~l   56 (182)
                      ++|+++|+.|..++.             .+..              .+.++.++.+|++|.+.++++++..    ++|+|
T Consensus        19 ~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~----~~d~V   94 (393)
T d1i24a_          19 LHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFLAESFKSF----EPDSV   94 (393)
T ss_dssp             HHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHHHHHHHHH----CCSEE
T ss_pred             HHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHHHHHHHhh----cchhe
Confidence            567888999987751             1111              1357899999999999999999886    59999


Q ss_pred             EEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--------------------
Q psy5462          57 INNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--------------------  116 (182)
Q Consensus        57 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--------------------  116 (182)
                      ||.|+..... ....+.+.....+.+|+.|+.+++.++...   ....++++.||...+.                    
T Consensus        95 iHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~  170 (393)
T d1i24a_          95 VHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTD  170 (393)
T ss_dssp             EECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEE
T ss_pred             eccccccccc-cccccccccccccccccccccHHHHHHHHh---ccccceeecccccccccccccccccccccccccccc
Confidence            9999875421 222356777788899999999999988643   2234666777654431                    


Q ss_pred             ----ccCCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         117 ----AAVNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       117 ----~~~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                          +..+...|+.+|.+.+.+++.++.+.+-
T Consensus       171 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l  202 (393)
T d1i24a_         171 TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGI  202 (393)
T ss_dssp             EEECCCCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccccccccHHHHHhhhhcccccccccccce
Confidence                1123357999999999999999888653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.98  E-value=4.9e-09  Score=77.82  Aligned_cols=129  Identities=13%  Similarity=0.079  Sum_probs=94.0

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      +.|+++|+.|..++.....          ...++.++.+|++|.+++.++++..    ++|++||+|+......    ..
T Consensus        18 ~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~----~~d~Vih~aa~~~~~~----~~   89 (338)
T d1orra_          18 SFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY----MPDSCFHLAGQVAMTT----SI   89 (338)
T ss_dssp             HHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH----CCSEEEECCCCCCHHH----HH
T ss_pred             HHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc----CCceEEeecccccccc----cc
Confidence            4677889998887532211          2357899999999999999998876    5899999998754321    23


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----------------------------CCCchhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----------------------------VNVSAYF  125 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----------------------------~~~~~y~  125 (182)
                      ++....+++|+.|+.++++++..    .+..++|+.||.....+.                            .+...|+
T Consensus        90 ~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  165 (338)
T d1orra_          90 DNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYG  165 (338)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHH
T ss_pred             cChHHHHHHHHHHHHHHHHhhhc----ccccccccccccccccccccccccccccccccccccccCcccCCccccccccc
Confidence            45567889999999999998754    244455555554433221                            1357899


Q ss_pred             hhHHHHHHHHHHHHhhhCC
Q psy5462         126 ASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       126 ~sKaa~~~~~~~la~e~~~  144 (182)
                      .+|...+.+..........
T Consensus       166 ~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         166 CSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHCC
T ss_pred             cccchhhhhhhhhhhccCc
Confidence            9999999999998888664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.81  E-value=5.6e-08  Score=72.17  Aligned_cols=143  Identities=12%  Similarity=0.020  Sum_probs=99.9

Q ss_pred             cccccccccceeccCCCC----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS   67 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~   67 (182)
                      +.|.++|++|..+++...                .....+.++.+|+++.+++.+.++..    ++|++||+|+......
T Consensus        19 ~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~----~~D~Vih~Aa~~~~~~   94 (339)
T d1n7ha_          19 EFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI----KPDEVYNLAAQSHVAV   94 (339)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHHH
T ss_pred             HHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh----ccchhhhccccccccc
Confidence            467788999998875321                11246788999999999999998875    6999999998754321


Q ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC-CCeEEEEecccccc----------ccCCCchhhhhHHHHHHHHH
Q psy5462          68 VLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN-TGHIVCISSIAALT----------AAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~iss~~~~~----------~~~~~~~y~~sKaa~~~~~~  136 (182)
                          +.+.....+..|+.+...+..++.....+.. ..++++.||...+.          +..+...|+.+|.+.+.+++
T Consensus        95 ----~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  170 (339)
T d1n7ha_          95 ----SFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTV  170 (339)
T ss_dssp             ----HHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             ----cccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHH
Confidence                2345567788999999999888865544332 34566666654322          12346799999999999999


Q ss_pred             HHHhhhCCCccceeeeCCCcc
Q psy5462         137 SIKCFSGYMLWGTTVTTPLRS  157 (182)
Q Consensus       137 ~la~e~~~~~~~i~v~~~~~~  157 (182)
                      .++....   .++.+..|...
T Consensus       171 ~~~~~~~---~~~~ilR~~~v  188 (339)
T d1n7ha_         171 NYREAYG---LFACNGILFNH  188 (339)
T ss_dssp             HHHHHHC---CEEEEEEECCE
T ss_pred             HHHHHhC---CCEEEEEEccc
Confidence            9988754   24455555433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.79  E-value=6.5e-08  Score=71.34  Aligned_cols=129  Identities=9%  Similarity=-0.104  Sum_probs=93.3

Q ss_pred             cccccccccceeccCCCCC----------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT----------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      ++|+++|+.|..+++....          ...++.++.+|++|.+.+.+++...    ..++++|+++......    ..
T Consensus        18 ~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~~~~~~~a~~~~~~~----~~   89 (321)
T d1rpna_          18 KLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA----QPQEVYNLAAQSFVGA----SW   89 (321)
T ss_dssp             HHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHHH----HT
T ss_pred             HHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc----cccccccccccccccc----cc
Confidence            4677889999888754432          2357899999999999999988886    4788888876643321    12


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      ++....+++|+.++.+++.++...   ....++++.|+...+.           +..+...|+.+|.+.+.+++.++.+.
T Consensus        90 ~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  166 (321)
T d1rpna_          90 NQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF  166 (321)
T ss_dssp             TSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence            334577899999999999988543   2234667666654321           11245899999999999999999886


Q ss_pred             C
Q psy5462         143 G  143 (182)
Q Consensus       143 ~  143 (182)
                      .
T Consensus       167 ~  167 (321)
T d1rpna_         167 G  167 (321)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.78  E-value=2.6e-08  Score=75.50  Aligned_cols=109  Identities=17%  Similarity=0.161  Sum_probs=83.0

Q ss_pred             CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCC
Q psy5462          24 THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNT  103 (182)
Q Consensus        24 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~  103 (182)
                      ...+.++.+|++|.+.++++++..   .++|+|||.|+......    ..+.....+++|+.++.+++.++..    .+.
T Consensus        68 ~~~~~~~~~Di~d~~~l~~~~~~~---~~~d~ViH~Aa~~~~~~----~~~~~~~~~~~N~~~t~~~l~~~~~----~~~  136 (383)
T d1gy8a_          68 DRYAALEVGDVRNEDFLNGVFTRH---GPIDAVVHMCAFLAVGE----SVRDPLKYYDNNVVGILRLLQAMLL----HKC  136 (383)
T ss_dssp             TCCCEEEESCTTCHHHHHHHHHHS---CCCCEEEECCCCCCHHH----HHHCHHHHHHHHHHHHHHHHHHHHH----TTC
T ss_pred             ccceEEEECcccCHHHhhhhhhcc---ceeehhhcccccccccc----cccccccccccccccccccchhhhc----cCC
Confidence            346889999999999999988765   57899999999765322    2344566788999999999988854    345


Q ss_pred             CeEEEEeccccccc------------------cCCCchhhhhHHHHHHHHHHHHhhhC
Q psy5462         104 GHIVCISSIAALTA------------------AVNVSAYFASKYGVTENHPSIKCFSG  143 (182)
Q Consensus       104 ~~ii~iss~~~~~~------------------~~~~~~y~~sKaa~~~~~~~la~e~~  143 (182)
                      .+++++++...+..                  ..+...|+.+|.+.+.+++.+....+
T Consensus       137 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g  194 (383)
T d1gy8a_         137 DKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG  194 (383)
T ss_dssp             CEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC
Confidence            67777776554321                  12357899999999999999988765

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.78  E-value=1.9e-08  Score=74.55  Aligned_cols=120  Identities=14%  Similarity=0.108  Sum_probs=87.3

Q ss_pred             CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCC
Q psy5462          23 KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENN  102 (182)
Q Consensus        23 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~  102 (182)
                      ...++.++.+|.++........      ..+|.++|.|+......    ........+++|+.++.++++++..    .+
T Consensus        53 ~~~~~~~~~~d~~~~~~~~~~~------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~----~~  118 (322)
T d1r6da_          53 ADPRLRFVHGDIRDAGLLAREL------RGVDAIVHFAAESHVDR----SIAGASVFTETNVQGTQTLLQCAVD----AG  118 (322)
T ss_dssp             TCTTEEEEECCTTCHHHHHHHT------TTCCEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHHHH----TT
T ss_pred             cCCCeEEEEeccccchhhhccc------cccceEEeecccccccc----cccchHHHhhhhHHHHHHHHHHHHH----cC
Confidence            3467899999999998666442      35899999998754322    3344556788999999999998854    34


Q ss_pred             CCeEEEEecccccccc-----------CCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCcccc
Q psy5462         103 TGHIVCISSIAALTAA-----------VNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSVT  159 (182)
Q Consensus       103 ~~~ii~iss~~~~~~~-----------~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~~  159 (182)
                      ..++|++||.+.+.+.           .+...|+.+|.+.+.+++.++++..   .++.+..|.....
T Consensus       119 ~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~lR~~~vyG  183 (322)
T d1r6da_         119 VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYG---LDVRITRCCNNYG  183 (322)
T ss_dssp             CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC---CCEEEEEECEEEC
T ss_pred             CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCEEEEEeeeEEC
Confidence            5689999998765322           2347899999999999999998854   3555555554433

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=5.9e-08  Score=71.44  Aligned_cols=130  Identities=11%  Similarity=0.044  Sum_probs=91.8

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|+.+..+....          .+|++|.+.+..+++.-    .+|.++|+|+......   ....+....+++|
T Consensus        20 ~~L~~~g~~vi~~~~~~----------~~~~~~~~~~~~~~~~~----~~d~v~~~a~~~~~~~---~~~~~~~~~~~~N   82 (315)
T d1e6ua_          20 RQLEQRGDVELVLRTRD----------ELNLLDSRAVHDFFASE----RIDQVYLAAAKVGGIV---ANNTYPADFIYQN   82 (315)
T ss_dssp             HHHTTCTTEEEECCCTT----------TCCTTCHHHHHHHHHHH----CCSEEEECCCCCCCHH---HHHHCHHHHHHHH
T ss_pred             HHHHHCcCEEEEecCch----------hccccCHHHHHHHHhhc----CCCEEEEcchhccccc---cchhhHHHHHHHH
Confidence            46777888776654321          37999999999888763    6899999987654321   1234445567899


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc----------------CCCchhhhhHHHHHHHHHHHHhhhCCCcc
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA----------------VNVSAYFASKYGVTENHPSIKCFSGYMLW  147 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~----------------~~~~~y~~sKaa~~~~~~~la~e~~~~~~  147 (182)
                      +.++.+++.++..    .+-.++|++||.+.+.+.                ++...|+.+|.+.+.+++.+..+.+.   
T Consensus        83 v~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl---  155 (315)
T d1e6ua_          83 MMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGR---  155 (315)
T ss_dssp             HHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence            9999999998854    344589999998765321                12347999999999999999988653   


Q ss_pred             ceeeeCCCcc
Q psy5462         148 GTTVTTPLRS  157 (182)
Q Consensus       148 ~i~v~~~~~~  157 (182)
                      ++.+..|...
T Consensus       156 ~~~ilR~~~v  165 (315)
T d1e6ua_         156 DYRSVMPTNL  165 (315)
T ss_dssp             EEEEEEECEE
T ss_pred             CEEEEeeccE
Confidence            5555555443

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.72  E-value=4.4e-08  Score=73.26  Aligned_cols=137  Identities=9%  Similarity=0.013  Sum_probs=93.5

Q ss_pred             cccccccccceeccCCC-----------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCC
Q psy5462           4 DRTTGHIHGILFIPWCL-----------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHT   72 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~   72 (182)
                      ++|.++|+.+.++....           ...+.++.++.+|++|.+.+..+++      ..+.++|.|+......    .
T Consensus        20 ~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~------~~~~v~~~a~~~~~~~----~   89 (346)
T d1oc2a_          20 HYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA------KADAIVHYAAESHNDN----S   89 (346)
T ss_dssp             HHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT------TCSEEEECCSCCCHHH----H
T ss_pred             HHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh------hhhhhhhhhhcccccc----h
Confidence            45677788766553110           1134688999999999999888765      3688899887754321    2


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------------------cCCCchhhhhHH
Q psy5462          73 DHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------------------AVNVSAYFASKY  129 (182)
Q Consensus        73 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------------------~~~~~~y~~sKa  129 (182)
                      ..+....+++|+.++.+++.++...     +.++|++||...+..                       ..+...|+.+|.
T Consensus        90 ~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~  164 (346)
T d1oc2a_          90 LNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKA  164 (346)
T ss_dssp             HHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHH
T ss_pred             hhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHH
Confidence            2334567899999999999887543     257888877654311                       112467999999


Q ss_pred             HHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462         130 GVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus       130 a~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      +.+.+++.+.++..   .++.+..|....
T Consensus       165 ~~E~~~~~~~~~~~---i~~~ilR~~~vy  190 (346)
T d1oc2a_         165 ASDLIVKAWVRSFG---VKATISNCSNNY  190 (346)
T ss_dssp             HHHHHHHHHHHHHC---CEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHcC---CCEEEEeeccee
Confidence            99999999988864   355555555433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=1.3e-07  Score=70.50  Aligned_cols=126  Identities=15%  Similarity=0.068  Sum_probs=91.9

Q ss_pred             cccccccccceeccCCCC-----------------CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCC
Q psy5462           4 DRTTGHIHGILFIPWCLP-----------------TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASS   66 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~-----------------~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~   66 (182)
                      ++|+++|+.|..++....                 ....++.++.+|++|.+.+.+++..    ..+++++|.|+.....
T Consensus        20 ~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~----~~~~~i~h~Aa~~~~~   95 (346)
T d1ek6a_          20 LELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK----YSFMAVIHFAGLKAVG   95 (346)
T ss_dssp             HHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH----CCEEEEEECCSCCCHH
T ss_pred             HHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc----cccccccccccccCcH
Confidence            467788998887753111                 0135788999999999999998877    4689999999875432


Q ss_pred             CcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------cCCCchhhhhHHHHHHH
Q psy5462          67 SVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------AVNVSAYFASKYGVTEN  134 (182)
Q Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~  134 (182)
                      .    +.++....+++|+.++.++.+++..    .+-.+++++||...+..            ..+...|+.+|...+..
T Consensus        96 ~----~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~  167 (346)
T d1ek6a_          96 E----SVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM  167 (346)
T ss_dssp             H----HHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred             h----hHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHH
Confidence            1    2334556789999999999988743    34468999988664421            12346899999999999


Q ss_pred             HHHHHhh
Q psy5462         135 HPSIKCF  141 (182)
Q Consensus       135 ~~~la~e  141 (182)
                      ++.++..
T Consensus       168 ~~~~~~~  174 (346)
T d1ek6a_         168 IRDLCQA  174 (346)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988765

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.61  E-value=1.6e-07  Score=70.54  Aligned_cols=127  Identities=18%  Similarity=0.103  Sum_probs=91.5

Q ss_pred             cccccccccceeccCCCCCC----CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK----THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|.++|+.|..++..-...    .....+..+|+.+.+.+..+++      .+|.+||.|+.......   ..+.....
T Consensus        33 ~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~d~Vih~a~~~~~~~~---~~~~~~~~  103 (363)
T d2c5aa1          33 RRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE------GVDHVFNLAADMGGMGF---IQSNHSVI  103 (363)
T ss_dssp             HHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT------TCSEEEECCCCCCCHHH---HTTCHHHH
T ss_pred             HHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhh------cCCeEeecccccccccc---cccccccc
Confidence            45778899998886433221    2345788899999887766553      48999999987644221   12335567


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------------cCCCchhhhhHHHHHHHHHHHHhh
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------------AVNVSAYFASKYGVTENHPSIKCF  141 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------------~~~~~~y~~sKaa~~~~~~~la~e  141 (182)
                      +.+|+.++.+++.++..    .+-.++|++||...+..                  ..+...|+.+|.+.+.+++.+..+
T Consensus       104 ~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~  179 (363)
T d2c5aa1         104 MYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD  179 (363)
T ss_dssp             HHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhHHHHhHHh----hCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            78999999999998754    34568999999765431                  123568999999999999999988


Q ss_pred             hC
Q psy5462         142 SG  143 (182)
Q Consensus       142 ~~  143 (182)
                      .+
T Consensus       180 ~g  181 (363)
T d2c5aa1         180 FG  181 (363)
T ss_dssp             HC
T ss_pred             hC
Confidence            65

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.61  E-value=1.5e-07  Score=70.04  Aligned_cols=126  Identities=13%  Similarity=0.092  Sum_probs=87.0

Q ss_pred             cccccccc-cceeccCCCC-----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHH
Q psy5462           4 DRTTGHIH-GILFIPWCLP-----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIE   77 (182)
Q Consensus         4 ~~l~~~g~-~v~~~~~~~~-----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~   77 (182)
                      ++|.++|+ .|..++..-.     ....++.++.+|+++.+++.+.+..     ++|++||+|+......    ..++..
T Consensus        18 ~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~-----~~d~Vih~a~~~~~~~----~~~~~~   88 (342)
T d2blla1          18 ERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVAIATPIE----YTRNPL   88 (342)
T ss_dssp             HHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBCCCCHHH----HHHSHH
T ss_pred             HHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh-----CCCccccccccccccc----cccCCc
Confidence            34566775 5665543221     2346799999999988776554322     3899999999764322    234455


Q ss_pred             HHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccccc------------------CCCchhhhhHHHHHHHHHHHH
Q psy5462          78 RIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAA------------------VNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        78 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~------------------~~~~~y~~sKaa~~~~~~~la  139 (182)
                      ..+++|+.++.++++++...     +.+++++||...+.+.                  .+...|+.+|.+.+.+++.++
T Consensus        89 ~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  163 (342)
T d2blla1          89 RVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYG  163 (342)
T ss_dssp             HHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccc-----cccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhh
Confidence            67899999999999998542     3567777776643221                  123679999999999999999


Q ss_pred             hhhC
Q psy5462         140 CFSG  143 (182)
Q Consensus       140 ~e~~  143 (182)
                      ...+
T Consensus       164 ~~~~  167 (342)
T d2blla1         164 EKEG  167 (342)
T ss_dssp             HHHC
T ss_pred             cccC
Confidence            8864

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.56  E-value=2.2e-07  Score=69.18  Aligned_cols=135  Identities=10%  Similarity=0.044  Sum_probs=96.4

Q ss_pred             cccccccccceeccCCCCC---------------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCc
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSV   68 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~   68 (182)
                      ++|.++|+.|..++.....               ...++.++.+|..|........      ...+.++|.++...... 
T Consensus        34 ~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~------~~~~~v~~~~a~~~~~~-  106 (341)
T d1sb8a_          34 ETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC------AGVDYVLHQAALGSVPR-  106 (341)
T ss_dssp             HHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH------TTCSEEEECCSCCCHHH-
T ss_pred             HHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc------ccccccccccccccccc-
Confidence            4677889998887643221               1246889999999988765443      34788888877643221 


Q ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------cCCCchhhhhHHHHHHHHHH
Q psy5462          69 LAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~  137 (182)
                         +.++....+++|+.++.++.+++..    .+..++|++||...+..           ..+...|+.+|.+.+.+++.
T Consensus       107 ---~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~  179 (341)
T d1sb8a_         107 ---SINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV  179 (341)
T ss_dssp             ---HHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHH
T ss_pred             ---cccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHH
Confidence               4566777889999999999998854    34569999999875421           22458999999999999999


Q ss_pred             HHhhhCCCccceeeeCCC
Q psy5462         138 IKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~  155 (182)
                      ++....-   ++.+..|.
T Consensus       180 ~~~~~~i---~~~ilR~~  194 (341)
T d1sb8a_         180 FSRCYGF---STIGLRYF  194 (341)
T ss_dssp             HHHHHCC---CCEEEEEC
T ss_pred             HHHHhCC---CeEEEEec
Confidence            9988653   44444444

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-07  Score=69.20  Aligned_cols=129  Identities=11%  Similarity=0.005  Sum_probs=84.1

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTD   73 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~   73 (182)
                      .+|.++|+.|..++.....         ...++.....|+.            .. +.++|+|||+|+.......    .
T Consensus        19 ~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~~~~~~d~VihlAa~~~~~~~----~   82 (312)
T d2b69a1          19 DKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV------------EPLYIEVDQIYHLASPASPPNY----M   82 (312)
T ss_dssp             HHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT------------SCCCCCCSEEEECCSCCSHHHH----T
T ss_pred             HHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH------------HHHHcCCCEEEECcccCCchhH----H
Confidence            3567789998887643221         1123444444442            22 3469999999987543211    1


Q ss_pred             HHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc----------------cCCCchhhhhHHHHHHHHHH
Q psy5462          74 HEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA----------------AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        74 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~----------------~~~~~~y~~sKaa~~~~~~~  137 (182)
                      ++....+++|+.++.++++++..    .+ .++|++||.+.+..                ..+...|+.+|.+.+.+++.
T Consensus        83 ~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~  157 (312)
T d2b69a1          83 YNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA  157 (312)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            23456788999999999998754    23 48999999765421                12457899999999999999


Q ss_pred             HHhhhCCCccceeeeCCCc
Q psy5462         138 IKCFSGYMLWGTTVTTPLR  156 (182)
Q Consensus       138 la~e~~~~~~~i~v~~~~~  156 (182)
                      ++.+.+-   ++.+..|..
T Consensus       158 ~~~~~~~---~~~~lR~~~  173 (312)
T d2b69a1         158 YMKQEGV---EVRVARIFN  173 (312)
T ss_dssp             HHHHHCC---CEEEEEECC
T ss_pred             HHHHhCC---cEEEEEeee
Confidence            9988642   444444443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.54  E-value=6e-07  Score=66.89  Aligned_cols=129  Identities=12%  Similarity=-0.022  Sum_probs=93.8

Q ss_pred             cccccccccceeccCCCCCC---------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTK---------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~---------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      +.|.++|+.|..++......         ...+.++.+|++|++.+.++++..    .+|+++|.|+.....    .+.+
T Consensus        26 ~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~----~~~~v~~~aa~~~~~----~~~~   97 (356)
T d1rkxa_          26 LWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF----QPEIVFHMAAQPLVR----LSYS   97 (356)
T ss_dssp             HHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH----CCSEEEECCSCCCHH----HHHH
T ss_pred             HHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc----hhhhhhhhhcccccc----cccc
Confidence            45778899999887554322         246999999999999999988875    589999999875432    1345


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc------------cCCCchhhhhHHHHHHHHHHHHhhh
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA------------AVNVSAYFASKYGVTENHPSIKCFS  142 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~------------~~~~~~y~~sKaa~~~~~~~la~e~  142 (182)
                      .....+.+|+.++.++++++...   .....+++.|+......            ..+...|+.+|...+.+++.++.++
T Consensus        98 ~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~  174 (356)
T d1rkxa_          98 EPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF  174 (356)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhc
Confidence            56778899999999999988642   22345555555443321            1235679999999999999888875


Q ss_pred             C
Q psy5462         143 G  143 (182)
Q Consensus       143 ~  143 (182)
                      .
T Consensus       175 ~  175 (356)
T d1rkxa_         175 F  175 (356)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=5.8e-06  Score=56.92  Aligned_cols=125  Identities=13%  Similarity=0.007  Sum_probs=77.4

Q ss_pred             cccccccccceeccCCCC----CCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLP----TKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERI   79 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~   79 (182)
                      ++|+++|+.+..+.+...    ....++.++.+|++|.+++.++++      +.|++|+++|........          
T Consensus        21 ~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~------~~d~vi~~~g~~~~~~~~----------   84 (205)
T d1hdoa_          21 AQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA------GQDAVIVLLGTRNDLSPT----------   84 (205)
T ss_dssp             HHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT------TCSEEEECCCCTTCCSCC----------
T ss_pred             HHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhc------CCCEEEEEeccCCchhhh----------
Confidence            467888999988864332    234568899999999998877755      479999999875432211          


Q ss_pred             HHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCC----CchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCC
Q psy5462          80 MDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVN----VSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPL  155 (182)
Q Consensus        80 ~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~----~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~  155 (182)
                       +++..+..++++++    ++.+-.++|++||.......+.    ...|...|...+.+.+.       ...+.++..|+
T Consensus        85 -~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~-------~~~~~tiirp~  152 (205)
T d1hdoa_          85 -TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPP  152 (205)
T ss_dssp             -CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCS
T ss_pred             -hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHh-------cCCceEEEecc
Confidence             12334455555544    4556679999998765432221    23455556555544432       23355566665


Q ss_pred             c
Q psy5462         156 R  156 (182)
Q Consensus       156 ~  156 (182)
                      .
T Consensus       153 ~  153 (205)
T d1hdoa_         153 H  153 (205)
T ss_dssp             E
T ss_pred             e
Confidence            3

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.22  E-value=8.1e-10  Score=76.43  Aligned_cols=123  Identities=9%  Similarity=-0.006  Sum_probs=78.2

Q ss_pred             cccccccccceeccCCCCC---------CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT---------KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDH   74 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~   74 (182)
                      +.|.++|+.+..+++....         ...++....+|++|.+++.+++      +++|+||||||..    +...+.+
T Consensus        41 ~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~iDilin~Ag~g----~~~~~~e  110 (191)
T d1luaa1          41 ALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV------KGAHFVFTAGAIG----LELLPQA  110 (191)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT------TTCSEEEECCCTT----CCCBCHH
T ss_pred             HHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh------cCcCeeeecCccc----cccCCHH
Confidence            4677888888887754421         1135567889999999877654      5689999999864    3346889


Q ss_pred             HHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-cCCCchhhhhHHHHHHHHHH
Q psy5462          75 EIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-AVNVSAYFASKYGVTENHPS  137 (182)
Q Consensus        75 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-~~~~~~y~~sKaa~~~~~~~  137 (182)
                      +|+..+++|+.+.++....+.+.+... ......+++...+.+ ..+...|+++|+++..|+++
T Consensus       111 ~~~~~~~~nv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~s  173 (191)
T d1luaa1         111 AWQNESSIEIVADYNAQPPLGIGGIDA-TDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFES  173 (191)
T ss_dssp             HHHTCTTCCEEEECCCSSSCSBTTCCT-TCEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             HHHhhhcceeehhHhhHHHHHHHhhhh-ccCcEEecceEEEeccCcCcHHHHHHHHHHHHHHhc
Confidence            999999999888776654443322221 122222222222111 11235699999998877653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.22  E-value=2.5e-06  Score=63.36  Aligned_cols=125  Identities=10%  Similarity=-0.010  Sum_probs=84.4

Q ss_pred             cccccccccceeccCCC------------CCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccC
Q psy5462           4 DRTTGHIHGILFIPWCL------------PTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAH   71 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~------------~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~   71 (182)
                      +.|+++|+.|..+.+..            .........+.+|++|.+++..++.      ..|+++|+++.....    .
T Consensus        29 ~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~~~v~~~a~~~~~~----~   98 (342)
T d1y1pa1          29 EQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------GAAGVAHIASVVSFS----N   98 (342)
T ss_dssp             HHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------TCSEEEECCCCCSCC----S
T ss_pred             HHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------cchhhhhhccccccc----c
Confidence            35667788887654322            1223344567789999887665543      479999998875422    2


Q ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-c------------------------------CC
Q psy5462          72 TDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-A------------------------------VN  120 (182)
Q Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-~------------------------------~~  120 (182)
                      +.   ...+..|+.++.++++++...   .+-.++|++||..+... .                              .+
T Consensus        99 ~~---~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p  172 (342)
T d1y1pa1          99 KY---DEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS  172 (342)
T ss_dssp             CH---HHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHH
T ss_pred             cc---cccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCC
Confidence            33   345678999999999987542   23578999998653211 1                              11


Q ss_pred             CchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         121 VSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       121 ~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      ...|+.+|.+.+.++..++++...
T Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~  196 (342)
T d1y1pa1         173 LWVYAASKTEAELAAWKFMDENKP  196 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCcccchhHhHHHHHHHhhhhccc
Confidence            247999999999999999887653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=98.16  E-value=3.8e-06  Score=60.55  Aligned_cols=96  Identities=16%  Similarity=0.131  Sum_probs=68.4

Q ss_pred             EEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEE
Q psy5462          30 FKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCI  109 (182)
Q Consensus        30 ~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~i  109 (182)
                      +.+|++|.+.++++++..    ++|+|||+||.......    .+.-...+++|+.++.++..++..     .+.+++++
T Consensus        36 ~~~Dl~~~~~~~~~i~~~----~~D~Vih~Aa~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~  102 (298)
T d1n2sa_          36 FCGDFSNPKGVAETVRKL----RPDVIVNAAAHTAVDKA----ESEPELAQLLNATSVEAIAKAANE-----TGAWVVHY  102 (298)
T ss_dssp             SCCCTTCHHHHHHHHHHH----CCSEEEECCCCCCHHHH----TTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEE
T ss_pred             ccCcCCCHHHHHHHHHHc----CCCEEEEeccccccccc----ccCccccccccccccccchhhhhc-----cccccccc
Confidence            457999999999998876    58999999997643221    222346678999999999888742     24678888


Q ss_pred             eccccccc-----------cCCCchhhhhHHHHHHHHHHH
Q psy5462         110 SSIAALTA-----------AVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus       110 ss~~~~~~-----------~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      ||...+.+           ..+...|+.+|.+.+.+.+..
T Consensus       103 ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         103 STDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             EEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhh
Confidence            77654321           123478999998887766543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=4.6e-05  Score=53.28  Aligned_cols=131  Identities=13%  Similarity=-0.036  Sum_probs=83.7

Q ss_pred             ccccccc--cceeccCCCCC----CCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHH
Q psy5462           5 RTTGHIH--GILFIPWCLPT----KTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIER   78 (182)
Q Consensus         5 ~l~~~g~--~v~~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~   78 (182)
                      +|.++|.  .+..+.+.-..    ....+....+|+.+.+++...      +...|++||++|...       .......
T Consensus        33 ~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~------~~~~d~vi~~~~~~~-------~~~~~~~   99 (232)
T d2bkaa1          33 EILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA------FQGHDVGFCCLGTTR-------GKAGAEG   99 (232)
T ss_dssp             HHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG------GSSCSEEEECCCCCH-------HHHHHHH
T ss_pred             HHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccc------ccccccccccccccc-------cccchhh
Confidence            4555663  56666643322    235677777888776544322      356899999998532       2334556


Q ss_pred             HHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHHHHHhhhCCCccceeeeCCCccc
Q psy5462          79 IMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHPSIKCFSGYMLWGTTVTTPLRSV  158 (182)
Q Consensus        79 ~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~~~~i~v~~~~~~~  158 (182)
                      ..++|+.++..+.+++..    .+-.++|++|+.....  .....|+.+|...+...+.+    +.  ..+++..|+...
T Consensus       100 ~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~--~~~~~Y~~~K~~~E~~l~~~----~~--~~~~IlRP~~i~  167 (232)
T d2bkaa1         100 FVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEEL----KF--DRYSVFRPGVLL  167 (232)
T ss_dssp             HHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTT----CC--SEEEEEECCEEE
T ss_pred             hhhhcccccceeeecccc----cCccccccCCcccccc--CccchhHHHHHHhhhccccc----cc--cceEEecCceee
Confidence            678899999999888743    4556899999977643  33467999998877655432    21  145666776544


Q ss_pred             cc
Q psy5462         159 TI  160 (182)
Q Consensus       159 ~~  160 (182)
                      .+
T Consensus       168 G~  169 (232)
T d2bkaa1         168 CD  169 (232)
T ss_dssp             CT
T ss_pred             cC
Confidence            43

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.56  E-value=0.00044  Score=48.98  Aligned_cols=111  Identities=14%  Similarity=0.129  Sum_probs=72.9

Q ss_pred             cccccccccceeccCCCCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHHHHHHHHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSSVLAHTDHEIERIMDVN   83 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n   83 (182)
                      ++|.++|++|..++..           .+|++|.++++++++..    ++|++||+|+......    ........+..|
T Consensus        19 ~~L~~~g~~Vi~~~r~-----------~~D~~d~~~~~~~l~~~----~~d~vih~a~~~~~~~----~~~~~~~~~~~n   79 (281)
T d1vl0a_          19 KQLKGKNVEVIPTDVQ-----------DLDITNVLAVNKFFNEK----KPNVVINCAAHTAVDK----CEEQYDLAYKIN   79 (281)
T ss_dssp             HHHTTSSEEEEEECTT-----------TCCTTCHHHHHHHHHHH----CCSEEEECCCCCCHHH----HHHCHHHHHHHH
T ss_pred             HHHHhCCCEEEEeech-----------hccCCCHHHHHHHHHHc----CCCEEEeecccccccc----ccccchhhcccc
Confidence            4567778887776643           26999999999998875    5899999988754322    223345566778


Q ss_pred             hHHHHHHHHHHhHHHHhCCCCeEEEEecccccc-----------ccCCCchhhhhHHHHHHHHHHH
Q psy5462          84 LMSNIKMVREFLPDMLENNTGHIVCISSIAALT-----------AAVNVSAYFASKYGVTENHPSI  138 (182)
Q Consensus        84 ~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~-----------~~~~~~~y~~sKaa~~~~~~~l  138 (182)
                      +.....+...+...     ...+++.||...+.           +..+...|+.+|...+.+.+..
T Consensus        80 ~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~  140 (281)
T d1vl0a_          80 AIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL  140 (281)
T ss_dssp             THHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccc-----cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh
Confidence            77777776665442     34566666644321           1234567888888877666543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.31  E-value=0.00012  Score=50.45  Aligned_cols=140  Identities=11%  Similarity=-0.016  Sum_probs=80.7

Q ss_pred             cccccccccceeccCC-----CCCCCceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCCCCCC---------cc
Q psy5462           4 DRTTGHIHGILFIPWC-----LPTKTHVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIVASSS---------VL   69 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~---------~~   69 (182)
                      ++|.++|+.+.+.+..     ......++.++.+|+++.+++.++++      .+|.+||+++......         ..
T Consensus        21 ~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vi~~a~~~~~~~~~~~~~~~~~~   94 (252)
T d2q46a1          21 KKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ------GIDALVILTSAVPKMKPGFDPTKGGRP   94 (252)
T ss_dssp             HHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT------TCSEEEECCCCCCEECTTCCTTSCCCC
T ss_pred             HHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccc------cceeeEEEEeeccccccccchhhhhhc
Confidence            4677888887665421     12235678899999999998887765      4799999987643211         01


Q ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhH-HHHHHHHHHHHhhhCCCccc
Q psy5462          70 AHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASK-YGVTENHPSIKCFSGYMLWG  148 (182)
Q Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sK-aa~~~~~~~la~e~~~~~~~  148 (182)
                      ......+.....+|+.++..+.......    ..+...+.++.....+..+...+...+ .......+.+..+.   ..+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  167 (252)
T d2q46a1          95 EFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADS---GTP  167 (252)
T ss_dssp             CEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHHS---SSC
T ss_pred             ccccccchhhhccccccceeeccccccc----cccccccccccccCCCCcccccccccchhhhhhhhhhhhhcc---ccc
Confidence            1112334455678888888887766443    356777777766544433333333333 22223333333332   335


Q ss_pred             eeeeCCCc
Q psy5462         149 TTVTTPLR  156 (182)
Q Consensus       149 i~v~~~~~  156 (182)
                      .++..|++
T Consensus       168 ~~ilRp~~  175 (252)
T d2q46a1         168 YTIIRAGG  175 (252)
T ss_dssp             EEEEEECE
T ss_pred             ceeecceE
Confidence            55555543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.03  E-value=0.00099  Score=45.36  Aligned_cols=112  Identities=16%  Similarity=0.094  Sum_probs=68.1

Q ss_pred             cccccccccceec--cCCCCCCCceeEEEEccCCCHHHHHHHHHHHHh-cCCccEEEEcccCCCCCCcccCCHHHHHHHH
Q psy5462           4 DRTTGHIHGILFI--PWCLPTKTHVAVYFKADVSDKAEIKKLNENVRK-IGYVDILINNAGIVASSSVLAHTDHEIERIM   80 (182)
Q Consensus         4 ~~l~~~g~~v~~~--~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~id~li~~ag~~~~~~~~~~~~~~~~~~~   80 (182)
                      ++|.++|+.+.+.  .+.......++   ..+..|..++      ... .+.+|.+|+++|.....      ...-....
T Consensus        20 ~~L~~~~~~~~v~~~~r~~~~~~~~~---~~~~~d~~~~------~~~~~~~~d~vi~~~g~~~~~------~~~~~~~~   84 (212)
T d2a35a1          20 DRILSEPTLAKVIAPARKALAEHPRL---DNPVGPLAEL------LPQLDGSIDTAFCCLGTTIKE------AGSEEAFR   84 (212)
T ss_dssp             HHHHHCTTCCEEECCBSSCCCCCTTE---ECCBSCHHHH------GGGCCSCCSEEEECCCCCHHH------HSSHHHHH
T ss_pred             HHHHhCCCeEEEEEEeCCchhhcccc---cccccchhhh------hhccccchheeeeeeeeeccc------cccccccc
Confidence            4566777744433  33322223333   3444444322      223 46789999998764221      11124567


Q ss_pred             HHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccccCCCchhhhhHHHHHHHHH
Q psy5462          81 DVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTAAVNVSAYFASKYGVTENHP  136 (182)
Q Consensus        81 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~~~~~~~y~~sKaa~~~~~~  136 (182)
                      ++|+.++.++++++.    +.+-.+++++|+..+..  .....|..+|...+...+
T Consensus        85 ~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~~l~  134 (212)
T d2a35a1          85 AVDFDLPLAVGKRAL----EMGARHYLVVSALGADA--KSSIFYNRVKGELEQALQ  134 (212)
T ss_dssp             HHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHT
T ss_pred             cchhhhhhhcccccc----ccccccccccccccccc--ccccchhHHHHHHhhhcc
Confidence            789999999888774    34557899999876543  345789999988776554

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.00087  Score=47.79  Aligned_cols=84  Identities=17%  Similarity=0.147  Sum_probs=55.7

Q ss_pred             cCCccEEEEcccCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEeccccccc-----------c
Q psy5462          50 IGYVDILINNAGIVASSSVLAHTDHEIERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALTA-----------A  118 (182)
Q Consensus        50 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~~-----------~  118 (182)
                      +..+++++|.|+......   .+.   ......|+.+...+..++...    + .++++.||.....+           .
T Consensus        66 ~~~~~~i~~~aa~~~~~~---~~~---~~~~~~~~~~~~~~l~~~~~~----~-i~~v~~ss~~~~~~~~~~~~~~~~~~  134 (307)
T d1eq2a_          66 FGDVEAIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATYGGRTSDFIESREYE  134 (307)
T ss_dssp             CSSCCEEEECCSCCCTTC---CCH---HHHHHHTHHHHHHHHHHHHHH----T-CCEEEEEEGGGGTTCCSCBCSSGGGC
T ss_pred             ccchhhhhhhcccccccc---ccc---ccccccccccccccccccccc----c-cccccccccccccccccccccccccc
Confidence            466889999887543321   122   335567788888887776542    2 34666666554322           1


Q ss_pred             CCCchhhhhHHHHHHHHHHHHhhhCC
Q psy5462         119 VNVSAYFASKYGVTENHPSIKCFSGY  144 (182)
Q Consensus       119 ~~~~~y~~sKaa~~~~~~~la~e~~~  144 (182)
                      .+...|+.+|.+.+.+++.+..+...
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~~~~~  160 (307)
T d1eq2a_         135 KPLNVYGYSKFLFDEYVRQILPEANS  160 (307)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred             ccccccccccchhhhhcccccccccc
Confidence            34578999999999999999888653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=95.04  E-value=0.09  Score=36.81  Aligned_cols=54  Identities=13%  Similarity=0.031  Sum_probs=39.6

Q ss_pred             cccccccccceeccCCCCCC------------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK------------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~------------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~   63 (182)
                      ++|.++|+.|..+.+.....            ..++.++.+|++|.+.+.+.++      ..+.++++++..
T Consensus        21 ~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~------~~~~~~~~~~~~   86 (312)
T d1qyda_          21 NASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK------QVDVVISALAGG   86 (312)
T ss_dssp             HHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT------TCSEEEECCCCS
T ss_pred             HHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc------Ccchhhhhhhhc
Confidence            45778899998887654322            2458899999999988877655      367888877654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=91.89  E-value=0.87  Score=31.11  Aligned_cols=54  Identities=17%  Similarity=0.221  Sum_probs=39.5

Q ss_pred             cccccccccceeccCCCCCC-------------CceeEEEEccCCCHHHHHHHHHHHHhcCCccEEEEcccCC
Q psy5462           4 DRTTGHIHGILFIPWCLPTK-------------THVAVYFKADVSDKAEIKKLNENVRKIGYVDILINNAGIV   63 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~~-------------~~~~~~~~~D~s~~~~~~~~~~~~~~~~~id~li~~ag~~   63 (182)
                      +.|.++|+.|..+.+.-...             ...+.++.+|+.+.+.....++.      .+.+|++++..
T Consensus        21 ~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------~~~vi~~~~~~   87 (307)
T d1qyca_          21 KASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN------VDVVISTVGSL   87 (307)
T ss_dssp             HHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT------CSEEEECCCGG
T ss_pred             HHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhh------ceeeeeccccc
Confidence            45678899998887544322             23578899999999987777653      68888887653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=90.17  E-value=1  Score=31.94  Aligned_cols=110  Identities=11%  Similarity=0.049  Sum_probs=64.5

Q ss_pred             cccccccccceeccCCCCC-------CCceeEEEEccCCCHHHH-HHHHHHHHhcCCccEEEEcccCCCCCCcccCCHHH
Q psy5462           4 DRTTGHIHGILFIPWCLPT-------KTHVAVYFKADVSDKAEI-KKLNENVRKIGYVDILINNAGIVASSSVLAHTDHE   75 (182)
Q Consensus         4 ~~l~~~g~~v~~~~~~~~~-------~~~~~~~~~~D~s~~~~~-~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~   75 (182)
                      ++|.++|+.|..+.+....       ...++.++.+|+.|..++ +.+      +...|.++++......          
T Consensus        21 ~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a------~~~~~~~~~~~~~~~~----------   84 (350)
T d1xgka_          21 RVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL------FEGAHLAFINTTSQAG----------   84 (350)
T ss_dssp             HHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH------HTTCSEEEECCCSTTS----------
T ss_pred             HHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHH------hcCCceEEeecccccc----------
Confidence            5677889999998765432       224688999999986543 323      2457877766443211          


Q ss_pred             HHHHHHHHhHHHHHHHHHHhHHHHhCCCCeEEEEecccccc--ccCCCchhhhhHHHHHHHHHHHH
Q psy5462          76 IERIMDVNLMSNIKMVREFLPDMLENNTGHIVCISSIAALT--AAVNVSAYFASKYGVTENHPSIK  139 (182)
Q Consensus        76 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~iss~~~~~--~~~~~~~y~~sKaa~~~~~~~la  139 (182)
                            .++....++..++.    +.+..++++.||.....  +......|..+|.....+.+...
T Consensus        85 ------~~~~~~~~~~~aa~----~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~  140 (350)
T d1xgka_          85 ------DEIAIGKDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLG  140 (350)
T ss_dssp             ------CHHHHHHHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSS
T ss_pred             ------hhhhhhhHHHHHHH----HhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhc
Confidence                  12223344455543    33445677777755432  23334567778877776655443