Diaphorina citri psyllid: psy5495


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270---
MSWYCGGGFLLIGNNKGRTGVFGIFNNTYNMYLEFEYPKIVNEYERKYATGCFSDIENEDKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIEVLFLGQVYHVYPKGPQYTVVDQGKDSDFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPIKDWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFIIKQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTYKVTEI
ccCECcccEEEEEcccccCEEEEEEcccCEEEEEECccHHHHHHHHHHcccccccccccccccccccEEEEEECccccCEEEHHHHHccHHHHHHccEEEccccccccccccccccccEEccccccccHHHHHccccccccccccccccccccEEEcccEEEEEEccccccCEEEEEEEccccEEEEEccEEEEEECcccccEEEEECcEEEcccEEEEcccccccEEEEEEEEccccEEEEEcccccccccccccccccccccccccccccc
*SWYCGGGFLLIGNNKGRTGVFGIFNNTYNMYLEFEYPKIVNEYERKYATGCFSDIE********QDVLAVTYQPKLSTFEMDIMEEHKIEVLFLGQVYHVYPKGPQYTVVDQGKDSDFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPIKDWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFIIKQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPG*******
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MSWYCGGGFLLIGNNKGRTGVFGIFNNTYNMYLEFEYPKIVNEYERKYATGCFSDIENEDKDTKEQDVLAVTYQPKLSTFEMDIMEEHKIEVLFLGQVYHVYPKGPQYTVVDQGKDSDFDFSTDRPWEVPFLARNRPWEKNKKKIPIEPIKDWSIFKGDRVEILVGKDKGKQGYVIQIFQEINSVIVEGLNTYLKKMGDSQFIIKQEAPLLVTNEVALVDPSDRMGCQVEWRYTEAGDRVRVSKRSGRIIPIPMAAYETHDYKTPGTYKVTEI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable 39S ribosomal protein L24, mitochondrial confidentQ29MA5
Probable 39S ribosomal protein L24, mitochondrial confidentQ9VMY1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044464 [CC]cell partprobableGO:0005575, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3V2D, chain Y
Confidence level:very confident
Coverage over the Query: 152-251
View the alignment between query and template
View the model in PyMOL
Template: 3U5E, chain Y
Confidence level:confident
Coverage over the Query: 122-225
View the alignment between query and template
View the model in PyMOL
Template: 2FTC, chain N
Confidence level:confident
Coverage over the Query: 6-58
View the alignment between query and template
View the model in PyMOL