Diaphorina citri psyllid: psy5528


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
MKALLHYTPSEDDIAHLLKEFTVDFLLKGYGRLVSQLYDLLVTDLHSQIDTSHFFWLVTYFLKFVVQLELDIDHVSSVISFDIISYLSFEGINLCEHLQIVKQHKGINLDPYVRRLHLIIHTMVRLFNQHKIYTTSLRRRMRKKKKVEKEEEEEKKKKNKRKGKRNNNNKKKKNEEEEEEEE
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccHHHHHcc
********PSEDDIAHLLKEFTVDFLLKGYGRLVSQLYDLLVTDLHSQIDTSHFFWLVTYFLKFVVQLELDIDHVSSVISFDIISYLSFEGINLCEHLQIVKQHKGINLDPYVRRLHLIIHTMVRLFNQHKIYTTS**********************************************
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MKALLHYTPSEDDIAHLLKEFTVDFLLKGYGRLVSQLYDLLVTDLHSQIDTSHFFWLVTYFLKFVVQLELDIDHVSSVISFDIISYLSFEGINLCEHLQIVKQHKGINLDPYVRRLHLIIHTMVRLFNQHKIYTTSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein timeless Required for the production of circadian rhythms. The biological cycle depends on the rhythmic formation and nuclear localization of the TIM-PER complex. Light induces the degradation of TIM, which promotes elimination of PER. Nuclear activity of the heterodimer coordinatively regulates PER and TIM transcription through a negative feedback loop. Behaves as a negative element in circadian transcriptional loop. Does not appear to bind DNA, suggesting indirect transcriptional inhibition.confidentP49021

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:2000678 [BP]negative regulation of transcription regulatory region DNA bindingprobableGO:0051098, GO:0051101, GO:0051100, GO:2000677, GO:0065007, GO:0043392, GO:0044092, GO:0008150, GO:0065009

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 136-182
View the alignment between query and template
View the model in PyMOL