Diaphorina citri psyllid: psy5570

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-----
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccEEccEEEccccccccccccccEEEEEEccccccCEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccccHHHHHHHHHcccccEEEEccccCCcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEEEEccEEHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEECccccccccccHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHcccccEEEEEEccHHHHHHHHHHHHcccccccEEEEEcccccccccccEEEEEEECccCEECcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHccccEEEEEHHHHHcccccccccccEEEccccccccccccccccccHHcccHHHHHHHHHHHcccccEEEccccHHHHHHHccccccccccccccccccccccccccccccccCEEEEEEEcccccccccccccccccEEEEEcccEEEcccccccccccEEEEEEcccccccccccccccc
MYLG*HPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNG*PGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDT*Q**LYF
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MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYExxxxxxxxxxxxxxxxxxxxxIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022625 [CC]cytosolic large ribosomal subunitprobableGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0005840, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0043226, GO:0044424, GO:0015934, GO:0043228, GO:0030529, GO:0032991, GO:0044422
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UGJ, chain A
Confidence level:very confident
Coverage over the Query: 457-500,526-684
View the alignment between query and template
View the model in PyMOL
Template: 4A17, chain P
Confidence level:very confident
Coverage over the Query: 237-310
View the alignment between query and template
View the model in PyMOL
Template: 4A17, chain P
Confidence level:very confident
Coverage over the Query: 359-423
View the alignment between query and template
View the model in PyMOL
Template: 3D54, chain D
Confidence level:very confident
Coverage over the Query: 671-800
View the alignment between query and template
View the model in PyMOL
Template: 1VK3, chain A
Confidence level:confident
Coverage over the Query: 117-231,261-282,369-377,392-408,425-493,513-598
View the alignment between query and template
View the model in PyMOL
Template: 1VK3, chain A
Confidence level:confident
Coverage over the Query: 2-181,192-233
View the alignment between query and template
View the model in PyMOL
Template: 1OI4, chain A
Confidence level:confident
Coverage over the Query: 668-729,740-814
View the alignment between query and template
View the model in PyMOL
Template: 2AAZ, chain A
Confidence level:confident
Coverage over the Query: 304-353
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3ugj, chain Avery confident Alignment | Template Structure