Psyllid ID: psy5570


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-----
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccEEccEEEccccccccccccccEEEEEEccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccccHHHHHHHHHHccccEEEEccccEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccEEEEEcccccccccccccEEEEEEEEccEEHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccccEEEEcccccHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHccccccEEEEEcccccccccccEEEEEEEEccEEEEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHccccEEEEEHHHHHcccccccccccEEEccccccccccccccccccHHcccHHHHHHHHHHHcccccEEEccccHHHHHHHccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccccccEEEEEcccEEEcccccccccccEEEEEEcccccccccccccccc
cEEEEccccHccccHHHHHHHHHHccccEEEEEccccccEEEcccccccccHHHccccccccccccccccccHHHHHHHHHcccHHcccEEEEEEcccccccHEEHHccccccccccccEEEEEccccccccHHHHccccccEEEEccHHHHHHHHHHHHHHHHHccHHHHHHcEEcHHHHHHHHHHHHcccccHHHHHHHHHHccccccEEEEcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccEEEEEEccEEEEEEEccEEEEEccccHHHHcccccccHHEEEEEEEccEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccEcccccccccccccccccHccccccccccccHHHHccEcccccEEEEEEcccccccccEEEEEccHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEcHccccHHHHHHHHHHHccEEEcccHHHHHHHHHHHccccccEEEEEEEEEEccccccccccEEEEEccccEEccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccEEEEEEEcHHcccccccccccccEEcccccHHcHHHHHHcccccHEEEEEccccccHHHHHHHHHHccccEEEEcHHHHHcccccHHHccEEEEcccccccccccccccHHHHHHccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHccccccccccEEcEEEEEEEEcccccccccEEEEEEEEcccccHHHHHcccccEEHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHccccccc
mylgihpgafsrvpyhgahssqhirapgpeqrhapcishivtltsyisipqvftlarapgfpttahtppniSVLQALNNVMRLVSVGskrfltnkVDRCVTGLiaqqqcvgplhtplADVAVVALVHNDLrgaatsigeqpikglvdpkrgARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSfsgrfafknhgiydhldrsqclpiryvddnnkitedypmnpngspgkrerkkktgrylgkyghgavqkgmpfkdyhgktgrvfnVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQrsadmglgvpfniASYSLLTYMIAHVTglqrtsnmtnskgyrrgtrdlfsrpfrrhgtiplsVYMKVYKVGDIVDIKCAESFYDRmtecvysspltsfnhgikpdpwfyvdvmgkgkvafnsNSLVFFQCAESFYDrmtecvysspltsfnhgikpdpwfyvdvmgKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRnklkrnptsvecfdlaqsnsehsrHWFFKISVAvnnepvlnedlgTLFLIWERTSYELEKLQMNARCADEEYNSLVtrigpkyqyqpvrddivGATLGkkvtrigpkyqyqpvrddivgaTLGKKVISIAVLReegingdrEMSAMAQVCGFEVWDITVQDLLENKitldrfkglvfpggfsyADALGSAKGWAASLLLNEGIKTQLNKFIarsdtfsfgvcngcqlmNLLGWfsvstqarqpyiksrvrcpplkkeksgvnitrlsitlnfstsdTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREhdldtlqghlyf
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRgaatsigeqpikglvdpKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNkitedypmnpngspgkrerkkKTGRYLGkyghgavqkgmpFKDYHGKTGRVfnvtqhavgvivnkrvrtriipksaekisssvsrkTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVtglqrtsnmtnskgyrrgtrdlfsrpfrrhgtiplsvymkvYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTrigpkyqyqpvRDDIVGATLGKKvtrigpkyqyqpvrddivgatlgkKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPyiksrvrcpplkkeksgvnitrlsITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFstsdtlswlldsNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
*********************************APCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNN*************************YLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRT********YRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREH***********
MYLG*HPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDL********************KVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMN**CADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDT*Q**LYF
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNP************TGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNG*PGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKI*SSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSN*T******RGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQ**LYF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
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MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYExxxxxxxxxxxxxxxxxxxxxIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWAFMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query875 2.2.26 [Sep-21-2011]
O150671338 Phosphoribosylformylglyci yes N/A 0.276 0.180 0.386 2e-44
Q5SUR01337 Phosphoribosylformylglyci yes N/A 0.251 0.164 0.400 3e-43
P354211354 Phosphoribosylformylglyci yes N/A 0.193 0.124 0.469 1e-40
Q9M8D31407 Probable phosphoribosylfo yes N/A 0.205 0.127 0.455 2e-40
Q54JC81355 Phosphoribosylformylglyci yes N/A 0.221 0.143 0.418 9e-38
Q193111324 Probable phosphoribosylfo yes N/A 0.109 0.072 0.606 1e-34
P389721358 Phosphoribosylformylglyci yes N/A 0.282 0.181 0.333 8e-34
Q9HXN21298 Phosphoribosylformylglyci yes N/A 0.227 0.153 0.351 3e-32
Q88P161299 Phosphoribosylformylglyci yes N/A 0.226 0.152 0.330 4e-31
Q4ZX021298 Phosphoribosylformylglyci yes N/A 0.206 0.139 0.352 2e-30
>sp|O15067|PUR4_HUMAN Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=4 Back     alignment and function desciption
 Score =  181 bits (459), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/277 (38%), Positives = 140/277 (50%), Gaps = 35/277 (12%)

Query: 503  GQIGLLFIYFIVQRTKLCIVQRHEVGLAFD--EWDLEYYTDIFRNKLKRNPTSVECFDLA 560
            G  GL     + +   L ++   E GL  +  E DL      +R+        + C +L 
Sbjct: 926  GNCGLQVDVPVPRVDVLSVLFAEEPGLVLEVQEPDLAQVLKRYRD------AGLHCLELG 979

Query: 561  QSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLV 620
             +  E   H   ++SV  N   VL E +G L  +WE TS++L++LQ   RC  EE   L 
Sbjct: 980  HTG-EAGPHAMVRVSV--NGAVVLEEPVGELRALWEETSFQLDRLQAEPRCVAEEERGLR 1036

Query: 621  TRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEG 680
             R+GP Y   P        T  K      P                G     +A+LREEG
Sbjct: 1037 ERMGPSYCLPP--------TFPKASVPREP----------------GGPSPRVAILREEG 1072

Query: 681  INGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAAS 740
             NGDREM+    + GFEVWD+T+QDL    I LD F+G+ F GGFSYAD LGSAKGWAA+
Sbjct: 1073 SNGDREMADAFHLAGFEVWDVTMQDLCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAA 1132

Query: 741  LLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGW 777
            +  +     +L +F  R DTFS GVCNGCQL+ LLGW
Sbjct: 1133 VTFHPRAGAELRRFRKRPDTFSLGVCNGCQLLALLGW 1169





Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 3
>sp|Q5SUR0|PUR4_MOUSE Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1 Back     alignment and function description
>sp|P35421|PUR4_DROME Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2 Back     alignment and function description
>sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=3 Back     alignment and function description
>sp|Q54JC8|PUR4_DICDI Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=1 SV=1 Back     alignment and function description
>sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=3 SV=3 Back     alignment and function description
>sp|P38972|PUR4_YEAST Phosphoribosylformylglycinamidine synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADE6 PE=1 SV=2 Back     alignment and function description
>sp|Q9HXN2|PUR4_PSEAE Phosphoribosylformylglycinamidine synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=purL PE=3 SV=1 Back     alignment and function description
>sp|Q88P16|PUR4_PSEPK Phosphoribosylformylglycinamidine synthase OS=Pseudomonas putida (strain KT2440) GN=purL PE=3 SV=1 Back     alignment and function description
>sp|Q4ZX02|PUR4_PSEU2 Phosphoribosylformylglycinamidine synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=purL PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query875
380025190 1326 PREDICTED: phosphoribosylformylglycinami 0.212 0.140 0.492 3e-50
345490285 1324 PREDICTED: phosphoribosylformylglycinami 0.213 0.141 0.507 3e-50
328791126 1325 PREDICTED: phosphoribosylformylglycinami 0.208 0.137 0.507 6e-50
383857210 1325 PREDICTED: phosphoribosylformylglycinami 0.208 0.137 0.487 1e-49
189236168 1309 PREDICTED: similar to phosphoribosylform 0.270 0.181 0.404 3e-47
332028851 1326 Phosphoribosylformylglycinamidine syntha 0.208 0.137 0.485 4e-47
307202110587 Phosphoribosylformylglycinamidine syntha 0.209 0.311 0.492 1e-46
242003452 1316 Phosphoribosylformylglycinamidine syntha 0.206 0.137 0.471 2e-46
241148658 1311 phosphoribosylformylglycinamidine syntha 0.203 0.135 0.478 6e-46
322798297 1269 hypothetical protein SINV_11838 [Solenop 0.204 0.141 0.492 6e-46
>gi|380025190|ref|XP_003696360.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Apis florea] Back     alignment and taxonomy information
 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 104/211 (49%), Positives = 131/211 (62%), Gaps = 25/211 (11%)

Query: 573  KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPV 632
            KI + V  + V++  + +L  +WE TSY+LE+ Q N  CA EE+N +  R  P Y     
Sbjct: 987  KIKIQVQEKLVVDSTVLSLMTLWEETSYQLERRQTNIECAFEEFNGIKDRTAPTY----- 1041

Query: 633  RDDIVGATLGKKVTRIGPKYQYQP-VRDDIVGATLGKKVISIAVLREEGINGDREMSAMA 691
                              K  + P +R   +   L  K I++ VLREEGINGDREM+A  
Sbjct: 1042 ------------------KLSFNPDIRPIAIYKNLSSK-IAVVVLREEGINGDREMAASL 1082

Query: 692  QVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQL 751
               GFEVWD+T+QD L+NKIT DRF+G++FPGGFSYAD LGSAKGWAASLL N  ++ QL
Sbjct: 1083 MEAGFEVWDVTMQDFLQNKITFDRFRGVIFPGGFSYADVLGSAKGWAASLLFNPSLQKQL 1142

Query: 752  NKFIARSDTFSFGVCNGCQLMNLLGWFSVST 782
              FI+R D FS GVCNGCQLM+LLGW    T
Sbjct: 1143 KAFISRKDIFSLGVCNGCQLMSLLGWIGTKT 1173




Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490285|ref|XP_001605732.2| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|328791126|ref|XP_625036.3| PREDICTED: phosphoribosylformylglycinamidine synthase [Apis mellifera] Back     alignment and taxonomy information
>gi|383857210|ref|XP_003704098.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|189236168|ref|XP_001809512.1| PREDICTED: similar to phosphoribosylformylglycinamidine synthase, putative [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332028851|gb|EGI68877.1| Phosphoribosylformylglycinamidine synthase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307202110|gb|EFN81618.1| Phosphoribosylformylglycinamidine synthase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|242003452|ref|XP_002422737.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] gi|212505570|gb|EEB09999.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|241148658|ref|XP_002405859.1| phosphoribosylformylglycinamidine synthase, putative [Ixodes scapularis] gi|215493774|gb|EEC03415.1| phosphoribosylformylglycinamidine synthase, putative [Ixodes scapularis] Back     alignment and taxonomy information
>gi|322798297|gb|EFZ20043.1| hypothetical protein SINV_11838 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query875
UNIPROTKB|F5GWT9914 PFAS "Phosphoribosylformylglyc 0.137 0.131 0.658 3.7e-73
RGD|13049261271 Pfas "phosphoribosylformylglyc 0.141 0.097 0.64 7.7e-73
UNIPROTKB|O150671338 PFAS "Phosphoribosylformylglyc 0.137 0.089 0.658 3.3e-72
MGI|MGI:26848641337 Pfas "phosphoribosylformylglyc 0.141 0.092 0.64 4e-72
UNIPROTKB|E2QYQ91341 PFAS "Uncharacterized protein" 0.12 0.078 0.714 7.2e-72
ZFIN|ZDB-GENE-030131-44201314 pfas "phosphoribosylformylglyc 0.12 0.079 0.742 3.6e-71
UNIPROTKB|I3L7121338 PFAS "Uncharacterized protein" 0.12 0.078 0.714 4.5e-70
UNIPROTKB|F1N4K11338 PFAS "Uncharacterized protein" 0.141 0.092 0.64 1.1e-68
TAIR|locus:20196371407 PUR4 "purine biosynthesis 4" [ 0.12 0.074 0.657 3.5e-64
FB|FBgn00000521354 ade2 "adenosine 2" [Drosophila 0.118 0.076 0.653 6.4e-63
UNIPROTKB|F5GWT9 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 385 (140.6 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
 Identities = 79/120 (65%), Positives = 93/120 (77%)

Query:    53 FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGP 112
             F L R P        PP +SV QAL  V+RL +V SKR+LTNKVDR V GL+AQQQCVGP
Sbjct:   217 FFLQRKPPMLQPLALPPGLSVHQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGP 276

Query:   113 LHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
             L TPLADVAVVAL H +L GAAT++GEQP+K L+DPK  AR+AVAEALTNLVFA ++DL+
Sbjct:   277 LQTPLADVAVVALSHEELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLR 336


GO:0004642 "phosphoribosylformylglycinamidine synthase activity" evidence=IEA
GO:0006189 "'de novo' IMP biosynthetic process" evidence=IEA
GO:0006541 "glutamine metabolic process" evidence=IEA
GO:0042493 "response to drug" evidence=IEA
RGD|1304926 Pfas "phosphoribosylformylglycinamidine synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O15067 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2684864 Pfas "phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QYQ9 PFAS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-4420 pfas "phosphoribosylformylglycinamidine synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|I3L712 PFAS "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1N4K1 PFAS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2019637 PUR4 "purine biosynthesis 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0000052 ade2 "adenosine 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.1.1LOW CONFIDENCE prediction!
4th Layer2.1.1.45LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query875
PLN032061307 PLN03206, PLN03206, phosphoribosylformylglycinamid 5e-58
TIGR017351310 TIGR01735, FGAM_synt, phosphoribosylformylglycinam 2e-54
PRK052971290 PRK05297, PRK05297, phosphoribosylformylglycinamid 2e-50
PLN032061307 PLN03206, PLN03206, phosphoribosylformylglycinamid 3e-50
pfam13507259 pfam13507, GATase_5, CobB/CobQ-like glutamine amid 8e-47
TIGR017351310 TIGR01735, FGAM_synt, phosphoribosylformylglycinam 5e-42
cd01740238 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotr 9e-40
PRK052971290 PRK05297, PRK05297, phosphoribosylformylglycinamid 3e-39
PLN03206 1307 PLN03206, PLN03206, phosphoribosylformylglycinamid 2e-37
TIGR01735 1310 TIGR01735, FGAM_synt, phosphoribosylformylglycinam 9e-28
PRK01827264 PRK01827, thyA, thymidylate synthase; Reviewed 4e-27
pfam00303262 pfam00303, Thymidylat_synt, Thymidylate synthase 2e-26
TIGR03284295 TIGR03284, thym_sym, thymidylate synthase 2e-25
PTZ00164514 PTZ00164, PTZ00164, bifunctional dihydrofolate red 2e-25
PRK05297 1290 PRK05297, PRK05297, phosphoribosylformylglycinamid 7e-23
COG0207268 COG0207, ThyA, Thymidylate synthase [Nucleotide tr 1e-22
cd00351215 cd00351, TS_Pyrimidine_HMase, Thymidylate synthase 1e-22
COG0047231 COG0047, PurL, Phosphoribosylformylglycinamidine ( 1e-21
PTZ00189160 PTZ00189, PTZ00189, 60S ribosomal protein L21; Pro 2e-20
PHA033661304 PHA03366, PHA03366, FGAM-synthase; Provisional 2e-17
TIGR017391202 TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr 6e-17
PTZ00189160 PTZ00189, PTZ00189, 60S ribosomal protein L21; Pro 1e-16
pfam0115799 pfam01157, Ribosomal_L21e, Ribosomal protein L21e 2e-16
pfam0115799 pfam01157, Ribosomal_L21e, Ribosomal protein L21e 2e-16
PLN00190158 PLN00190, PLN00190, 60S ribosomal protein L21; Pro 6e-16
PLN00190158 PLN00190, PLN00190, 60S ribosomal protein L21; Pro 4e-14
cd02204264 cd02204, PurL_repeat2, PurL subunit of the formylg 8e-14
COG213998 COG2139, RPL21A, Ribosomal protein L21E [Translati 4e-13
COG0046743 COG0046, PurL, Phosphoribosylformylglycinamidine ( 3e-12
PHA033661304 PHA03366, PHA03366, FGAM-synthase; Provisional 6e-11
TIGR017351310 TIGR01735, FGAM_synt, phosphoribosylformylglycinam 2e-10
PLN032061307 PLN03206, PLN03206, phosphoribosylformylglycinamid 2e-09
pfam13507259 pfam13507, GATase_5, CobB/CobQ-like glutamine amid 3e-09
PRK0430698 PRK04306, PRK04306, 50S ribosomal protein L21e; Re 3e-09
TIGR017391202 TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr 4e-09
PLN03206 1307 PLN03206, PLN03206, phosphoribosylformylglycinamid 8e-08
COG213998 COG2139, RPL21A, Ribosomal protein L21E [Translati 1e-07
PRK01175261 PRK01175, PRK01175, phosphoribosylformylglycinamid 2e-07
PRK052971290 PRK05297, PRK05297, phosphoribosylformylglycinamid 3e-07
TIGR018571239 TIGR01857, FGAM-synthase, phosphoribosylformylglyc 8e-07
TIGR01736715 TIGR01736, FGAM_synth_II, phosphoribosylformylglyc 2e-06
cd01740238 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotr 6e-06
cd01653115 cd01653, GATase1, Type 1 glutamine amidotransferas 6e-06
cd0312892 cd03128, GAT_1, Type 1 glutamine amidotransferase 1e-05
TIGR01737227 TIGR01737, FGAM_synth_I, phosphoribosylformylglyci 1e-05
cd02203313 cd02203, PurL_repeat1, PurL subunit of the formylg 6e-04
PRK03619219 PRK03619, PRK03619, phosphoribosylformylglycinamid 0.001
>gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
 Score =  216 bits (551), Expect = 5e-58
 Identities = 92/207 (44%), Positives = 116/207 (56%), Gaps = 28/207 (13%)

Query: 573  KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ--YQ 630
             I V V+    L+E   +L  +WE TS++LEKLQ    C  +E   L +R  P ++  + 
Sbjct: 964  LIEVKVDGATCLSEKTASLRDMWEETSFQLEKLQRLESCVAQEKEGLKSRKAPTWKLSFT 1023

Query: 631  PVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAM 690
            P   D                         I+ AT   KV   A++REEG NGDREM+A 
Sbjct: 1024 PAFTD-----------------------KKIMNATSKPKV---AIIREEGSNGDREMAAA 1057

Query: 691  AQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQ 750
                GFE WD+T+ DLL  +I+LD F+G+VF GGFSYAD L SAKGWA S+  NE +  Q
Sbjct: 1058 FYAAGFEPWDVTMSDLLNGRISLDDFRGIVFVGGFSYADVLDSAKGWAGSIRFNEPLLQQ 1117

Query: 751  LNKFIARSDTFSFGVCNGCQLMNLLGW 777
              +F  R DTFS GVCNGCQLM LLGW
Sbjct: 1118 FQEFYNRPDTFSLGVCNGCQLMALLGW 1144


Length = 1307

>gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|222184 pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>gnl|CDD|153211 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>gnl|CDD|234984 PRK01827, thyA, thymidylate synthase; Reviewed Back     alignment and domain information
>gnl|CDD|215846 pfam00303, Thymidylat_synt, Thymidylate synthase Back     alignment and domain information
>gnl|CDD|213790 TIGR03284, thym_sym, thymidylate synthase Back     alignment and domain information
>gnl|CDD|240299 PTZ00164, PTZ00164, bifunctional dihydrofolate reductase-thymidylate synthase; Provisional Back     alignment and domain information
>gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|223285 COG0207, ThyA, Thymidylate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|238211 cd00351, TS_Pyrimidine_HMase, Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides Back     alignment and domain information
>gnl|CDD|223125 COG0047, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|240309 PTZ00189, PTZ00189, 60S ribosomal protein L21; Provisional Back     alignment and domain information
>gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional Back     alignment and domain information
>gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>gnl|CDD|240309 PTZ00189, PTZ00189, 60S ribosomal protein L21; Provisional Back     alignment and domain information
>gnl|CDD|110179 pfam01157, Ribosomal_L21e, Ribosomal protein L21e Back     alignment and domain information
>gnl|CDD|110179 pfam01157, Ribosomal_L21e, Ribosomal protein L21e Back     alignment and domain information
>gnl|CDD|177784 PLN00190, PLN00190, 60S ribosomal protein L21; Provisional Back     alignment and domain information
>gnl|CDD|177784 PLN00190, PLN00190, 60S ribosomal protein L21; Provisional Back     alignment and domain information
>gnl|CDD|100035 cd02204, PurL_repeat2, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat Back     alignment and domain information
>gnl|CDD|225050 COG2139, RPL21A, Ribosomal protein L21E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional Back     alignment and domain information
>gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|222184 pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain Back     alignment and domain information
>gnl|CDD|235275 PRK04306, PRK04306, 50S ribosomal protein L21e; Reviewed Back     alignment and domain information
>gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|225050 COG2139, RPL21A, Ribosomal protein L21E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234913 PRK01175, PRK01175, phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>gnl|CDD|130916 TIGR01857, FGAM-synthase, phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine synthase II Back     alignment and domain information
>gnl|CDD|153211 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|233553 TIGR01737, FGAM_synth_I, phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat Back     alignment and domain information
>gnl|CDD|235140 PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 875
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 100.0
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 100.0
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 100.0
KOG1907|consensus1320 100.0
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 100.0
PHA033661304 FGAM-synthase; Provisional 100.0
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 100.0
COG0046743 PurL Phosphoribosylformylglycinamidine (FGAM) synt 100.0
PRK01213724 phosphoribosylformylglycinamidine synthase II; Pro 100.0
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 100.0
TIGR01736715 FGAM_synth_II phosphoribosylformylglycinamidine sy 100.0
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 100.0
PRK14090601 phosphoribosylformylglycinamidine synthase II; Pro 99.97
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 99.97
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 99.92
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 99.92
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.9
cd02193272 PurL Formylglycinamide ribonucleotide amidotransfe 99.82
cd02204264 PurL_repeat2 PurL subunit of the formylglycinamide 99.8
KOG1907|consensus 1320 99.79
PLN03206 1307 phosphoribosylformylglycinamidine synthase; Provis 99.76
PRK0430698 50S ribosomal protein L21e; Reviewed 99.73
TIGR01735 1310 FGAM_synt phosphoribosylformylglycinamidine syntha 99.72
PTZ00189160 60S ribosomal protein L21; Provisional 99.7
PLN00190158 60S ribosomal protein L21; Provisional 99.7
PRK14090601 phosphoribosylformylglycinamidine synthase II; Pro 99.69
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.66
PF0115799 Ribosomal_L21e: Ribosomal protein L21e; InterPro: 99.66
TIGR03267323 methan_mark_2 putative methanogenesis marker prote 99.66
COG213998 RPL21A Ribosomal protein L21E [Translation, riboso 99.59
cd02203313 PurL_repeat1 PurL subunit of the formylglycinamide 99.58
PRK05297 1290 phosphoribosylformylglycinamidine synthase; Provis 99.57
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 99.5
TIGR01857 1239 FGAM-synthase phosphoribosylformylglycinamidine sy 99.4
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.36
PRK11780217 isoprenoid biosynthesis protein with amidotransfer 99.35
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.34
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.32
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.31
TIGR01736715 FGAM_synth_II phosphoribosylformylglycinamidine sy 99.28
COG0693188 ThiJ Putative intracellular protease/amidase [Gene 99.27
PTZ00189160 60S ribosomal protein L21; Provisional 99.26
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.26
PLN00190158 60S ribosomal protein L21; Provisional 99.26
cd00396222 PurM-like AIR (aminoimidazole ribonucleotide) synt 99.25
cd02192283 PurM-like3 AIR synthase (PurM) related protein, su 99.25
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.24
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.22
PRK05731318 thiamine monophosphate kinase; Provisional 99.2
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.19
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.18
KOG1732|consensus160 99.17
PRK01213724 phosphoribosylformylglycinamidine synthase II; Pro 99.17
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.16
TIGR01379317 thiL thiamine-monophosphate kinase. Proteins scori 99.15
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.14
cd03133213 GATase1_ES1 Type 1 glutamine amidotransferase (GAT 99.14
TIGR01382166 PfpI intracellular protease, PfpI family. The memb 99.12
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.12
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 99.1
cd03134165 GATase1_PfpI_like A type 1 glutamine amidotransfer 99.06
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.04
cd02194291 ThiL ThiL (Thiamine-monophosphate kinase) plays a 99.04
cd03169180 GATase1_PfpI_1 Type 1 glutamine amidotransferase ( 99.04
COG0207268 ThyA Thymidylate synthase [Nucleotide transport an 99.03
PF0115799 Ribosomal_L21e: Ribosomal protein L21e; InterPro: 99.03
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.01
cd02196297 PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn 99.01
cd03147231 GATase1_Ydr533c_like Type 1 glutamine amidotransfe 98.99
KOG0623|consensus 541 98.99
cd02195287 SelD Selenophosphate synthetase (SelD) catalyzes t 98.96
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 98.96
PRK04155287 chaperone protein HchA; Provisional 98.96
TIGR02124320 hypE hydrogenase expression/formation protein HypE 98.96
KOG0673|consensus293 98.96
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 98.93
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 98.89
cd03135163 GATase1_DJ-1 Type 1 glutamine amidotransferase (GA 98.89
PRK11574196 oxidative-stress-resistance chaperone; Provisional 98.83
PRK13821323 thyA thymidylate synthase; Provisional 98.8
cd03148232 GATase1_EcHsp31_like Type 1 glutamine amidotransfe 98.8
COG0046743 PurL Phosphoribosylformylglycinamidine (FGAM) synt 98.79
TIGR01383179 not_thiJ DJ-1 family protein. This model represent 98.78
cd02197293 HypE HypE (Hydrogenase expression/formation protei 98.78
KOG2764|consensus247 98.78
cd03141221 GATase1_Hsp31_like Type 1 glutamine amidotransfera 98.76
TIGR03284296 thym_sym thymidylate synthase. Members of this pro 98.76
PF01965147 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T 98.74
cd03140170 GATase1_PfpI_3 Type 1 glutamine amidotransferase ( 98.72
cd03137187 GATase1_AraC_1 AraC transcriptional regulators hav 98.72
PRK0430698 50S ribosomal protein L21e; Reviewed 98.71
cd03132142 GATase1_catalase Type 1 glutamine amidotransferase 98.71
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 98.71
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 98.7
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 98.67
KOG1732|consensus160 98.65
cd03139183 GATase1_PfpI_2 Type 1 glutamine amidotransferase ( 98.63
TIGR00878332 purM phosphoribosylaminoimidazole synthetase. This 98.62
cd06061298 PurM-like1 AIR synthase (PurM) related protein, su 98.6
PRK01827264 thyA thymidylate synthase; Reviewed 98.59
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 98.58
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 98.57
COG2144324 Selenophosphate synthetase-related proteins [Gener 98.54
PTZ00164514 bifunctional dihydrofolate reductase-thymidylate s 98.54
PRK00784488 cobyric acid synthase; Provisional 98.53
PRK00758184 GMP synthase subunit A; Validated 98.52
PRK06490239 glutamine amidotransferase; Provisional 98.52
PRK06895190 putative anthranilate synthase component II; Provi 98.51
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 98.5
cd03136185 GATase1_AraC_ArgR_like AraC transcriptional regula 98.5
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 98.49
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 98.48
PF0058696 AIRS: AIR synthase related protein, N-terminal dom 98.46
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 98.41
cd03138195 GATase1_AraC_2 AraC transcriptional regulators hav 98.4
PRK06186229 hypothetical protein; Validated 98.38
PRK05385327 phosphoribosylaminoimidazole synthetase; Provision 98.36
cd00351215 TS_Pyrimidine_HMase Thymidylate synthase and pyrim 98.36
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 98.35
PRK08250235 glutamine amidotransferase; Provisional 98.35
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 98.31
PRK07053234 glutamine amidotransferase; Provisional 98.29
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 98.28
TIGR00313475 cobQ cobyric acid synthase CobQ. 98.26
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 98.22
TIGR03283199 thy_syn_methano thymidylate synthase, methanogen t 98.22
PLN02347 536 GMP synthetase 98.21
PRK00074 511 guaA GMP synthase; Reviewed 98.2
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 98.2
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 98.2
PRK05380533 pyrG CTP synthetase; Validated 98.2
PRK00956208 thyA thymidylate synthase; Provisional 98.19
PLN02327557 CTP synthase 98.17
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 98.16
PRK00943347 selenophosphate synthetase; Provisional 98.16
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 98.15
PF00303269 Thymidylat_synt: Thymidylate synthase; InterPro: I 98.15
PRK11249752 katE hydroperoxidase II; Provisional 98.11
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 98.09
PRK07765214 para-aminobenzoate synthase component II; Provisio 98.08
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 98.06
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 98.06
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 98.04
cd02691346 PurM-like2 AIR synthase (PurM) related protein, ar 98.04
PRK12564360 carbamoyl phosphate synthase small subunit; Review 98.04
PRK09393322 ftrA transcriptional activator FtrA; Provisional 98.03
PRK13566720 anthranilate synthase; Provisional 98.02
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 98.02
PLN02335222 anthranilate synthase 98.01
cd0312892 GAT_1 Type 1 glutamine amidotransferase (GATase1)- 98.0
PF13278166 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M 98.0
COG0311194 PDX2 Predicted glutamine amidotransferase involved 98.0
CHL00101190 trpG anthranilate synthase component 2 97.93
COG213998 RPL21A Ribosomal protein L21E [Translation, riboso 97.92
PRK05665240 amidotransferase; Provisional 97.91
PRK05637208 anthranilate synthase component II; Provisional 97.88
PRK12838354 carbamoyl phosphate synthase small subunit; Review 97.88
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 97.88
PRK05670189 anthranilate synthase component II; Provisional 97.88
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 97.84
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 97.82
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 97.81
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 97.79
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 97.78
PF02769153 AIRS_C: AIR synthase related protein, C-terminal d 97.76
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 97.72
PRK07567242 glutamine amidotransferase; Provisional 97.68
PRK06774191 para-aminobenzoate synthase component II; Provisio 97.68
PRK08007187 para-aminobenzoate synthase component II; Provisio 97.64
PRK09065237 glutamine amidotransferase; Provisional 97.57
COG0611317 ThiL Thiamine monophosphate kinase [Coenzyme metab 97.55
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 97.53
PRK14105345 selenophosphate synthetase; Provisional 97.47
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 97.32
TIGR00476347 selD selenium donor protein. In prokaryotes, the i 97.25
PRK08857193 para-aminobenzoate synthase component II; Provisio 97.23
KOG2387|consensus585 97.21
COG2071243 Predicted glutamine amidotransferases [General fun 97.2
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 97.09
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 97.09
COG1797451 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme 96.78
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 96.76
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 96.6
PLN02889 918 oxo-acid-lyase/anthranilate synthase 96.51
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 96.47
PRK05282233 (alpha)-aspartyl dipeptidase; Validated 96.34
PF09825 367 BPL_N: Biotin-protein ligase, N terminal; InterPro 96.24
COG3442250 Predicted glutamine amidotransferase [General func 95.93
KOG0370|consensus 1435 95.19
cd03129210 GAT1_Peptidase_E_like Type 1 glutamine amidotransf 94.87
PLN02557379 phosphoribosylformylglycinamidine cyclo-ligase 94.49
KOG1224|consensus 767 94.24
KOG3210|consensus226 94.2
KOG1559|consensus340 94.16
KOG1622|consensus 552 93.5
COG3155217 ElbB Uncharacterized protein involved in an early 93.46
KOG3179|consensus245 93.4
COG4977 328 Transcriptional regulator containing an amidase do 93.26
COG4285253 Uncharacterized conserved protein [Function unknow 88.71
PRK05368302 homoserine O-succinyltransferase; Provisional 88.04
TIGR02069250 cyanophycinase cyanophycinase. This model describe 87.45
cd03145217 GAT1_cyanophycinase Type 1 glutamine amidotransfer 87.1
PF03575154 Peptidase_S51: Peptidase family S51; InterPro: IPR 86.48
cd02203313 PurL_repeat1 PurL subunit of the formylglycinamide 81.07
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
Probab=100.00  E-value=1.9e-101  Score=952.07  Aligned_cols=607  Identities=35%  Similarity=0.517  Sum_probs=500.7

Q ss_pred             CeeeeCCCCcCccccccccccccccCCCC------CCCcc-------------------cEEEecccccccCCCCc-ccc
Q psy5570           1 MYLGIHPGAFSRVPYHGAHSSQHIRAPGP------EQRHA-------------------PCISHIVTLTSYISIPQ-VFT   54 (875)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------------------~~~~~~~~~~l~~~~P~-~~~   54 (875)
                      |.|+|.|++++++..    +|+++++|+.      +++++                   ..++|||...|++++|+ .|+
T Consensus       546 m~l~V~p~~~~~f~~----i~~re~~~~~vVG~vT~~~rl~v~~~~~~~~~~~~g~~~~~~~~dlp~~~l~~~~P~~~~~  621 (1307)
T PLN03206        546 DALLIKPESRDLLQS----ICDRERCSMAVIGTIDGSGRVVLVDSAAPEKCEANGLPPPPPAVDLDLEKVLGDMPQKTFE  621 (1307)
T ss_pred             heeeECcccHHHHHH----HHHHcCCCeEEEEEEecCCeEEEEECCccccccccccccCceeEEEEhHHhcCCCCccccc
Confidence            899999999999999    9999999996      33232                   34578988889999999 998


Q ss_pred             cccCCCCCCCCCCCCCcCHHHHHHHHhcCcccccccceeecccccccceeEeccccCCCCCCcCceEEEEEecCCcEEEE
Q psy5570          55 LARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAA  134 (875)
Q Consensus        55 ~~~~~~~~~~~~~p~~~dl~~~l~~vL~~pnVaSK~~l~~qyD~~Vgg~tv~~P~vGp~~~p~sDaaV~~~~~~~~~g~a  134 (875)
                      .++.++...+.++|...+++++|+++|++||||||+||++||||+|||+||+||+|||||.|++|++|+++...+.+|+|
T Consensus       622 ~~~~~~~~~~~~~~~~~~~~~~l~~vL~~pnVaSK~~l~~~~D~~V~g~vv~~~~vGp~q~p~aD~aV~~~~~~~~~g~a  701 (1307)
T PLN03206        622 FKRVANKLEPLDIPPGITVMDALKRVLRLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTHTGLTGGA  701 (1307)
T ss_pred             cccccccccccccCCCcCHHHHHHHHhcCCccccccchhhhcccccCceEcccCccCCccCCCcceeEEEEeCCCCeEEE
Confidence            88865444444444456899999999999999999999999999999999999999999999999999998765679999


Q ss_pred             EEecCCCcccccCHHHHHHHHHHHHHhhccccCCcccccceeccccccccccCCcccccccCcc----hhcccccccccc
Q psy5570         135 TSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHG----IYDHLDRSQCLP  210 (875)
Q Consensus       135 ms~G~~p~~~~~dPy~GA~~AV~EAl~Nlva~g~~~l~~i~ls~n~~~~~~~~~~~~w~~g~P~----l~~a~~a~~~~~  210 (875)
                      ||+|+||+++.+|||+||++||+||+|||+|++..+++++.+++|||          |++++|+    ||++     |+|
T Consensus       702 ~s~G~~p~~~~~dp~~ga~~AV~Ea~~Nlvaa~~~~l~di~~s~nw~----------~~~~~p~~~~~l~~a-----v~g  766 (1307)
T PLN03206        702 CAIGEQPIKGLVDPKAMARLAVGEALTNLVWAKVTALSDVKASGNWM----------YAAKLDGEGADMYDA-----AVA  766 (1307)
T ss_pred             EEecCCCceeeeCHHHHHHHHHHHHHhHhhccCCCcHHHeEEEcChh----------HhhcCCCCHHHHHHH-----HHH
Confidence            99999999999999999999999999999999877899999999999          8888886    6666     999


Q ss_pred             hHHhhhhcCCcccCCCCCCCCCCc--cccccccccc-cccccccccccCCCccccCCCcceecceeeecccEEEEccccc
Q psy5570         211 IRYVDDNNKITEDYPMNPNGSPGK--RERKKKTGRY-LGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRT  287 (875)
Q Consensus       211 l~d~~~~lgiP~i~gkdsm~~~~~--~~~~~~~~~~-~~~~~~~si~~g~p~kd~~g~Tg~v~~~~~~a~g~~v~k~v~~  287 (875)
                      ++|+|++||||+|+|||||||++.  ++.+..|+|| |++++.                  +             .+++.
T Consensus       767 ~~~~~~~Lgipii~GKdSls~~~~~~~~~~~~P~TLvIs~~~~------------------v-------------~Dv~~  815 (1307)
T PLN03206        767 LRDAMIELGVAIDGGKDSLSMAAQAGGEVVKAPGNLVISAYVT------------------C-------------PDITK  815 (1307)
T ss_pred             HHHHHHHcCCCcccCeecCCCCCCCCCCCcCCCCCEEEEEEEE------------------c-------------CCccc
Confidence            999999999999999999999875  3567777777 555542                  1             12222


Q ss_pred             ccccccccccCCCCCcceEEEEEEeeCCcccccccccccccccchhHHHHHHHHHHHHHHhhccccccccccCCCCccCC
Q psy5570         288 RIIPKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRG  367 (875)
Q Consensus       288 ritp~l~~~~~~sk~~~s~laq~~v~~g~l~~~l~qrS~D~~Lg~~fn~~qya~l~~~~a~~~~l~~~~~m~~skG~r~~  367 (875)
                      .+                                                                              
T Consensus       816 ~v------------------------------------------------------------------------------  817 (1307)
T PLN03206        816 TV------------------------------------------------------------------------------  817 (1307)
T ss_pred             Cc------------------------------------------------------------------------------
Confidence            33                                                                              


Q ss_pred             ccccccccccccCCCCcceeeEEeecCCEEEE---ecccccccCccccccC-CcccccCC--CCCCCCCcccCchHHHHH
Q psy5570         368 TRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDI---KCAESFYDRMTECVYS-SPLTSFNH--GIKPDPWFYVDVMGKGKV  441 (875)
Q Consensus       368 Tr~~~Sk~fr~~G~~pls~~l~~yk~GD~V~I---~~~~sv~kg~p~~~~g-~~~~v~~~--G~~p~~~~~~~~~~~~~~  441 (875)
                           +++||+.              ||.+++   .|...      .++-| .+.+++++  +..|+    +++++.+|.
T Consensus       818 -----tp~lK~~--------------G~~vlL~idlG~~~------~~LGGS~~~q~~~~~g~~~Pd----v~d~~~lK~  868 (1307)
T PLN03206        818 -----TPDLKLG--------------DDGVLLHVDLGKGK------RRLGGSALAQAYDQIGDDCPD----LDDVAYLKK  868 (1307)
T ss_pred             -----ChhhcCC--------------CCEEEEEEecCCCC------cCccccHHHHHhCccCCCCCC----CCCHHHHHH
Confidence                 3334321              333222   11110      11111 12334555  44899    888999999


Q ss_pred             HHHHHH-hH---HhhhhcccCC-ChHHHHhcCCcccccCCCCCCCceEEEeCCcchhHHHHhhhhccccchhhhhhhhcc
Q psy5570         442 AFNSNS-LV---FFQCAESFYD-RMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQR  516 (875)
Q Consensus       442 ~f~~~~-li---~i~s~hdvsD-GL~~al~eMa~~~~~~G~~~~~~~~Idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  516 (875)
                      +|+.++ +|   +|.|+||+|| ||++||+||| |++++|++      ||+....                        .
T Consensus       869 ~f~av~~Li~~glV~A~HDvSdGGL~~ALaEMA-fag~~G~~------Idl~~~~------------------------~  917 (1307)
T PLN03206        869 AFEATQDLIAKRLISAGHDISDGGLVVTLLEMA-FAGNCGIN------VDLPSSG------------------------H  917 (1307)
T ss_pred             HHHHHHHHHHCCCeeEEEeCCcCHHHHHHHHHH-hhcCCcEE------EEeCCcc------------------------c
Confidence            999999 88   8999999999 8999999999 99999999      8875311                        0


Q ss_pred             hhhhhhccccceee--EecCCHHHHHHHHHhhcCCCCCCCceeecccccCcccccceeeEEEEECCEeeccccHHHHHHH
Q psy5570         517 TKLCIVQRHEVGLA--FDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLI  594 (875)
Q Consensus       517 ~~~~~LFsE~~G~v--v~~~d~~~v~~~f~~~l~r~p~~ve~~~IGqvnseh~~h~~~~~~i~~~g~~i~~~~l~~L~~~  594 (875)
                      +.++.||+|++|++  |.+++.+.+.++++.      .++.+..||+++++      ..+.|..+|+.+.+.++++|+++
T Consensus       918 ~~~~~LFsEs~G~VieV~~e~~~~v~~~l~~------~gi~~~vIG~vt~~------~~i~I~~~g~~~l~~~l~eL~~~  985 (1307)
T PLN03206        918 SAFETLFAEELGLVLEVSRKNLDAVMEKLAA------AGVTAEVIGQVTAS------PLIEVKVDGATCLSEKTASLRDM  985 (1307)
T ss_pred             hHHHHHhCCCccEEEEEehhHHHHHHHHHHH------CCCCeEEEEEECCC------CeEEEEECCEEEEecCHHHHHHH
Confidence            13478999999977  556677888898987      68889999999875      35777778888888999999999


Q ss_pred             HHHHHHHHHhhhcCccchhhhhhhccccCCCcee--cCCCCcccccccccccccccCCcccCCCCccccccccccccceE
Q psy5570         595 WERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ--YQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVIS  672 (875)
Q Consensus       595 w~~ts~~i~~~~~np~~a~~e~~~~~~~~~p~~~--f~p~~~~~~~~~~~~~~~~~~~thn~p~~~~p~~ga~~~~~~~k  672 (875)
                      |++|||+++++|+||.|+++|+..+.++.++.++  |+|...                       ..++   ..+.++||
T Consensus       986 W~~tS~~le~l~~~~~~~~~e~~~~~~~~~~~~~l~f~~~~~-----------------------~~~~---~~~~~~pk 1039 (1307)
T PLN03206        986 WEETSFQLEKLQRLESCVAQEKEGLKSRKAPTWKLSFTPAFT-----------------------DKKI---MNATSKPK 1039 (1307)
T ss_pred             HhccChhhhhccCCchhhhHHHhhhhccCCceeecccCcccc-----------------------cccc---ccCCCCCe
Confidence            9999999999999999999998766665555332  444310                       0011   12457899


Q ss_pred             EEEEecCCCCCHHHHHHHHHHcCCeeEEEEeecccccccCccCccEEEEcCCcCccccccchhHHHHHHhhchhHHHHHH
Q psy5570         673 IAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLN  752 (875)
Q Consensus       673 VaIlv~pG~n~~~e~~~A~~~aG~~v~~V~~~dl~~~~~~l~~~d~lvlPGGfS~gD~l~~s~~~a~ail~~~~i~~~v~  752 (875)
                      |+|++|||+||++||++||+++||++++||++||.++...|++|++|+|||||||||+++++++||+++++|++++++|+
T Consensus      1040 VaVl~~pGtN~~~e~~~Af~~aGf~~~~V~~~dl~~~~~~L~~~~glv~pGGFSyGD~l~sg~~wa~~i~~n~~~~~~~~ 1119 (1307)
T PLN03206       1040 VAIIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNGRISLDDFRGIVFVGGFSYADVLDSAKGWAGSIRFNEPLLQQFQ 1119 (1307)
T ss_pred             EEEEECCCCCCHHHHHHHHHHcCCceEEEEeeecccccccccceeEEEEcCcCCCccccchHHHHHHHHHhChHHHHHHH
Confidence            99999999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             HHHHCCCceEEEEehhHHHHHhcCCCCCCc-------------cccccCCCCeEEeccEEec--cC------Cc--eEEE
Q psy5570         753 KFIARSDTFSFGVCNGCQLMNLLGWFSVST-------------QARQPYIKSRVRCPPLKKE--KS------GV--NITR  809 (875)
Q Consensus       753 ~f~~r~g~~vLGICnGfQiL~elGlLpg~~-------------~t~~~n~~~~f~~~~v~v~--~~------~~--~~~r  809 (875)
                      +|++++|+|+||||||||||+++|||||..             +++.+|.++||+||||.+.  ++      ++  ..+.
T Consensus      1120 ~f~~~~d~~~LGICNGfQiL~~lgllPg~~~~~~~~~~~~e~~p~l~~N~s~rfesr~v~v~V~~s~si~l~~~~G~~l~ 1199 (1307)
T PLN03206       1120 EFYNRPDTFSLGVCNGCQLMALLGWVPGPQVGGGLGAGGDPSQPRFVHNESGRFECRFTSVTIEDSPAIMLKGMEGSTLG 1199 (1307)
T ss_pred             HHHhCCCceEEEEcHHHHHHHHcCCCCCCccccccccccccCCceeeecCCCCeEEeceEEEECCCCChhhcccCCCEEE
Confidence            999878999999999999999999999862             4568899999999999984  21      23  4688


Q ss_pred             eecce-----eecCHHHHHHHHhCCCcee
Q psy5570         810 LSITL-----NFSTSDTLSWLLDSNTNVT  833 (875)
Q Consensus       810 ~pi~~-----~f~~~~~l~~l~~~~~~~~  833 (875)
                      +||+|     ||.+++++++|++|||-++
T Consensus      1200 i~vaHgEGr~~~~~~~~l~~l~~~gqva~ 1228 (1307)
T PLN03206       1200 VWAAHGEGRAYFPDESVLDEVLKSNLAPV 1228 (1307)
T ss_pred             EEEEcCCCCeecCCHHHHHHHHhcCeEEE
Confidence            88999     5567778999999998653



>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>KOG1907|consensus Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway Back     alignment and domain information
>cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat Back     alignment and domain information
>KOG1907|consensus Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK04306 50S ribosomal protein L21e; Reviewed Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>PTZ00189 60S ribosomal protein L21; Provisional Back     alignment and domain information
>PLN00190 60S ribosomal protein L21; Provisional Back     alignment and domain information
>PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01157 Ribosomal_L21e: Ribosomal protein L21e; InterPro: IPR001147 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 Back     alignment and domain information
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II Back     alignment and domain information
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] Back     alignment and domain information
>PTZ00189 60S ribosomal protein L21; Provisional Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>PLN00190 60S ribosomal protein L21; Provisional Back     alignment and domain information
>cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein Back     alignment and domain information
>cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK05731 thiamine monophosphate kinase; Provisional Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>KOG1732|consensus Back     alignment and domain information
>PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01379 thiL thiamine-monophosphate kinase Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 Back     alignment and domain information
>TIGR01382 PfpI intracellular protease, PfpI family Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine Back     alignment and domain information
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>COG0207 ThyA Thymidylate synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01157 Ribosomal_L21e: Ribosomal protein L21e; InterPro: IPR001147 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis Back     alignment and domain information
>cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein Back     alignment and domain information
>KOG0623|consensus Back     alignment and domain information
>cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>PRK04155 chaperone protein HchA; Provisional Back     alignment and domain information
>TIGR02124 hypE hydrogenase expression/formation protein HypE Back     alignment and domain information
>KOG0673|consensus Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 Back     alignment and domain information
>PRK11574 oxidative-stress-resistance chaperone; Provisional Back     alignment and domain information
>PRK13821 thyA thymidylate synthase; Provisional Back     alignment and domain information
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) Back     alignment and domain information
>COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR01383 not_thiJ DJ-1 family protein Back     alignment and domain information
>cd02197 HypE HypE (Hydrogenase expression/formation protein) Back     alignment and domain information
>KOG2764|consensus Back     alignment and domain information
>cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein Back     alignment and domain information
>TIGR03284 thym_sym thymidylate synthase Back     alignment and domain information
>PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity Back     alignment and domain information
>cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK04306 50S ribosomal protein L21e; Reviewed Back     alignment and domain information
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>KOG1732|consensus Back     alignment and domain information
>cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>TIGR00878 purM phosphoribosylaminoimidazole synthetase Back     alignment and domain information
>cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function Back     alignment and domain information
>PRK01827 thyA thymidylate synthase; Reviewed Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>COG2144 Selenophosphate synthetase-related proteins [General function prediction only] Back     alignment and domain information
>PTZ00164 bifunctional dihydrofolate reductase-thymidylate synthase; Provisional Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>PRK05385 phosphoribosylaminoimidazole synthetase; Provisional Back     alignment and domain information
>cd00351 TS_Pyrimidine_HMase Thymidylate synthase and pyrimidine hydroxymethylase: Thymidylate synthase (TS) and deoxycytidylate hydroxymethylase (dCMP-HMase) are homologs that catalyze analogous alkylation of C5 of pyrimidine nucleotides Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>TIGR03283 thy_syn_methano thymidylate synthase, methanogen type Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>PRK00956 thyA thymidylate synthase; Provisional Back     alignment and domain information
>PLN02327 CTP synthase Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>PRK00943 selenophosphate synthetase; Provisional Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PF00303 Thymidylat_synt: Thymidylate synthase; InterPro: IPR000398 Thymidylate synthase (2 Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PRK09393 ftrA transcriptional activator FtrA; Provisional Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism] Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PRK14105 selenophosphate synthetase; Provisional Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>TIGR00476 selD selenium donor protein Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>KOG2387|consensus Back     alignment and domain information
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05282 (alpha)-aspartyl dipeptidase; Validated Back     alignment and domain information
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>KOG0370|consensus Back     alignment and domain information
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins Back     alignment and domain information
>PLN02557 phosphoribosylformylglycinamidine cyclo-ligase Back     alignment and domain information
>KOG1224|consensus Back     alignment and domain information
>KOG3210|consensus Back     alignment and domain information
>KOG1559|consensus Back     alignment and domain information
>KOG1622|consensus Back     alignment and domain information
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG3179|consensus Back     alignment and domain information
>COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription] Back     alignment and domain information
>COG4285 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>TIGR02069 cyanophycinase cyanophycinase Back     alignment and domain information
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase Back     alignment and domain information
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query875
3ugj_A1303 Formyl Glycinamide Ribonucletide Amidotransferase F 1e-27
1t3t_A1303 Structure Of Formylglycinamide Synthetase Length = 2e-26
3ihi_A307 Crystal Structure Of Mouse Thymidylate Synthase Len 4e-18
1rts_A307 Thymidylate Synthase From Rat In Ternary Complex Wi 4e-18
3egy_X313 Crystal Structure Of Human Thymidyalte Synthase A19 5e-17
1hw3_A313 Structure Of Human Thymidylate Synthase Suggests Ad 6e-17
3n5g_A325 Crystal Structure Of Histidine-Tagged Human Thymidy 6e-17
3ebu_A313 Replacement Of Val3 In Human Thymidylate Synthase A 7e-17
3n5e_A325 Crystal Structure Of Human Thymidylate Synthase Bou 7e-17
4e28_A325 Structure Of Human Thymidylate Synthase In Inactive 8e-17
3n5e_B325 Crystal Structure Of Human Thymidylate Synthase Bou 8e-17
3ehi_X313 Crystal Structure Of Human Thymidyalte Synthase M19 8e-17
3eaw_X313 Replacement Of Val3 In Human Thymidylate Synthase A 8e-17
1hw4_A355 Structure Of Thymidylate Synthase Suggests Advantag 9e-17
3gh2_X313 Replacement Of Val3 In Human Thymidylate Synthase A 9e-17
2rd8_B313 Human Thymidylate Synthase Stabilized In Active Con 9e-17
1ju6_A313 Human Thymidylate Synthase Complex With Dump And Ly 9e-17
2rd8_A313 Human Thymidylate Synthase Stabilized In Active Con 9e-17
3ef9_A313 Replacement Of Val3 In Human Thymidylate Synthase A 1e-16
4gyh_A318 Structure Of Human Thymidylate Synthase At High Sal 1e-16
3edw_X313 Replacement Of Val3 In Human Thymidylate Synthase A 1e-16
3gg5_A313 Replacement Of Val3 In Human Thymidylate Synthase A 1e-16
1hvy_A288 Human Thymidylate Synthase Complexed With Dump And 1e-16
1hzw_A290 Crystal Structure Of Human Thymidylate Synthase Len 1e-16
3ed7_A295 Replacement Of Val3 In Human Thymidylate Synthase A 1e-16
3uwl_A315 Crystal Structure Of Enteroccocus Faecalis Thymidyl 2e-16
3ix6_A360 Crystal Structure Of Thymidylate Synthase Thya From 2e-16
3uwl_B315 Crystal Structure Of Enteroccocus Faecalis Thymidyl 5e-16
3kgb_A294 Crystal Structure Of Thymidylate Synthase 12 FROM E 2e-15
1bo8_A316 Thymidylate Synthase R178t Mutant Length = 316 3e-15
1bp6_A316 Thymidylate Synthase R23i, R179t Double Mutant Leng 3e-15
1bo7_A316 Thymidylate Synthase R179t Mutant Length = 316 3e-15
4dq1_A321 Thymidylate Synthase From Staphylococcus Aureus. Le 4e-15
3inv_A521 Trypanosoma Cruzi Dihydrofolate Reductase-Thymidyla 7e-15
2h2q_A521 Crystal Structure Of Trypanosoma Cruzi Dihydrofolat 7e-15
1tsv_A316 Thymidylate Synthase R179a Mutant Length = 316 1e-14
1tsx_A316 Thymidylate Synthase R179e Mutant Length = 316 1e-14
2g8d_A316 Lactobacillus Casei Thymidylate Synthase Y261w-dump 1e-14
2g86_A316 L. Casei Thymidylate Synthase Y261f In Complex With 1e-14
1tsy_A316 Thymidylate Synthase R179k Mutant Length = 316 1e-14
2g8a_A316 Lactobacillus Casei Y261m In Complex With Substrate 1e-14
2g89_A316 L. Casei Thymidylate Synthase Y261a In Complex With 1e-14
1lca_A316 Lactobacillus Casei Thymidylate Synthase Ternary Co 1e-14
1vza_A316 Thymidylate Synthase E60d Mutant Binary Complex Wit 1e-14
1bp0_A316 Thymidylate Synthase R23i Mutant Length = 316 1e-14
1vzb_A316 L. Casei Thymidylate Synthase Mutant E60q Binary Co 1e-14
1tda_A315 Structures Of Thymidylate Synthase With A C-Termina 1e-14
3um5_A608 Double Mutant (A16v+s108t) Plasmodium Falciparum Di 2e-14
3qgt_A608 Crystal Structure Of Wild-Type Pfdhfr-Ts Complexed 2e-14
3jsu_A608 Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium 2e-14
1bpj_A316 Thymidylate Synthase R178t, R179t Double Mutant Len 2e-14
1njc_A316 Thymidylate Synthase, Mutation, N229d With 2'-Deoxy 4e-14
1j3i_C328 Wild-Type Plasmodium Falciparum Dihydrofolate Reduc 5e-14
1jmi_A316 Contributions Of Orientation And Hydrogen Bonding T 6e-14
3qj7_A264 Crystal Structure Of The Mycobacterium Tuberculosis 7e-14
3i3r_A511 X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE 8e-14
1jmg_A316 Contributions Of Orientation And Hydrogen Bonding T 8e-14
3nrr_A515 Co-Crystal Structure Of Dihydrofolate Reductase-Thy 8e-14
1jmf_A316 Contributions Of Orientation And Hydrogen Bonding T 1e-13
2zkr_q160 Structure Of A Mammalian Ribosomal 60s Subunit With 1e-13
1nja_A316 Thymidylate Synthase, Mutation, N229c With 2'-deoxy 2e-13
1jmh_A316 Contributions Of Orientation And Hydrogen Bonding T 2e-13
3bgx_A264 E. Coli Thymidylate Synthase C146s Mutant Complexed 2e-12
1qqq_A264 Crystal Structure Analysis Of Ser254 Mutant Of Esch 3e-12
2g8m_B264 Escherichia Coli Thymidylate Synthase Y209w In Comp 3e-12
3bfi_A264 E. Coli Thymidylate Synthase Y209m Mutant Complexed 3e-12
2ftn_A264 E. Coli Thymidylate Synthase Y94f Mutant Length = 2 3e-12
1f4d_A264 Crystal Structure Of E. Coli Thymidylate Synthase C 3e-12
1aiq_A264 Crystal Structure Of Thymidylate Synthase R126e Mut 3e-12
1kce_A264 E. Coli Thymidylate Synthase Mutant E58q In Complex 3e-12
2tsc_A264 Structure, Multiple Site Binding, And Segmental Acc 4e-12
1tlc_A265 Thymidylate Synthase Complexed With Dgmp And Folate 4e-12
2bbq_A264 Structural Basis For Recognition Of Polyglutamyl Fo 4e-12
2vf0_A264 Crystal Structure Of The Thymidylate Synthase K48q 4e-12
1zpr_A264 E. Coli Thymidylate Synthase Mutant E58q In Complex 4e-12
2vet_A264 Crystal Structure Of The Thymidylate Synthase K48q 4e-12
1jg0_A264 Crystal Structure Of Escherichia Coli Thymidylate S 4e-12
1kzj_A264 Crystal Structure Of Ects W80g/dump/cb3717 Complex 4e-12
1evf_A264 Crystal Structure Analysis Of Cys167 Mutant Of Esch 5e-12
1evg_A264 Crystal Structure Analysis Of Cys167 Mutant Of Esch 6e-12
1ev5_A264 Crystal Structure Analysis Of Ala167 Mutant Of Esch 6e-12
1f4g_A264 Crystal Structure Of E. Coli Thymidylate Synthase C 6e-12
1ci7_A297 Ternary Complex Of Thymidylate Synthase From Pneumo 9e-12
1ev8_A264 Crystal Structure Analysis Of Cys167 Mutant Of Esch 1e-11
1ffl_A264 Crystal Structure Of The Apo-Thymidylate Synthase R 1e-11
1dna_A264 D221(169)n Mutant Does Not Promote Opening Of The C 1e-11
1bq1_A264 E. Coli Thymidylate Synthase Mutant N177a In Comple 3e-11
1nce_A264 Crystal Structure Of A Ternary Complex Of E. Coli T 4e-11
2aaz_B317 Cryptococcus Neoformans Thymidylate Synthase Comple 8e-11
2oip_A519 Crystal Structure Of The S290g Active Site Mutant O 2e-10
3hj3_A521 Crystal Structure Of The Chts-Dhfr F207a Non-Active 2e-10
1qzf_A521 Crystal Structure Of Dhfr-Ts From Cryptosporidium H 2e-10
3dl6_A521 Crystal Structure Of The A287fS290G ACTIVE SITE MUT 2e-10
3dl5_A521 Crystal Structure Of The A287f Active Site Mutant O 2e-10
1s1i_Q100 Structure Of The Ribosomal 80s-Eef2-Sordarin Comple 3e-10
3izs_U160 Localization Of The Large Subunit Ribosomal Protein 5e-10
3jyw_Q116 Structure Of The 60s Proteins For Eukaryotic Riboso 9e-10
3izr_U164 Localization Of The Large Subunit Ribosomal Protein 2e-09
3izr_U164 Localization Of The Large Subunit Ribosomal Protein 4e-08
4f2v_A272 Crystal Structure Of De Novo Designed Serine Hydrol 5e-08
3zf7_U159 High-resolution Cryo-electron Microscopy Structure 2e-07
3zf7_U159 High-resolution Cryo-electron Microscopy Structure 1e-04
4a17_P157 T.Thermophila 60s Ribosomal Subunit In Complex With 6e-07
4a17_P157 T.Thermophila 60s Ribosomal Subunit In Complex With 1e-04
1tis_A286 Crystal Structure Of Thymidylate Synthase From T4 P 2e-06
1b02_A279 Crystal Structure Of Thymidylate Synthase A From Ba 3e-06
1bko_A278 Thermostable Thymidylate Synthase A From Bacillus S 3e-06
>pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 Back     alignment and structure

Iteration: 1

Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 27/206 (13%) Query: 573 KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQ-- 630 + + N++ V +E TL + W T++++++L+ N +CAD+E+ + P + Sbjct: 971 RFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDTDPGLNVKLS 1030 Query: 631 -PVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSA 689 + +DI + T PK +AVLRE+G+N EM+A Sbjct: 1031 FDINEDIAAPYI---ATGARPK---------------------VAVLREQGVNSHVEMAA 1066 Query: 690 MAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKT 749 GF+ D+ + DLL +I L F LV GGFSY D LG+ +GWA S+L N ++ Sbjct: 1067 AFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRD 1126 Query: 750 QLNKFIARSDTFSFGVCNGCQLMNLL 775 + F R T + GVCNGCQ+M+ L Sbjct: 1127 EFETFFHRPQTLALGVCNGCQMMSNL 1152
>pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 Back     alignment and structure
>pdb|3IHI|A Chain A, Crystal Structure Of Mouse Thymidylate Synthase Length = 307 Back     alignment and structure
>pdb|1RTS|A Chain A, Thymidylate Synthase From Rat In Ternary Complex With Dump And Tomudex Length = 307 Back     alignment and structure
>pdb|3EGY|X Chain X, Crystal Structure Of Human Thymidyalte Synthase A191k With Loop 181- 197 Stabilized In The Inactive Conformation Length = 313 Back     alignment and structure
>pdb|1HW3|A Chain A, Structure Of Human Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 313 Back     alignment and structure
>pdb|3N5G|A Chain A, Crystal Structure Of Histidine-Tagged Human Thymidylate Synthase Length = 325 Back     alignment and structure
>pdb|3EBU|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|3N5E|A Chain A, Crystal Structure Of Human Thymidylate Synthase Bound To A Peptide Inhibitor Length = 325 Back     alignment and structure
>pdb|4E28|A Chain A, Structure Of Human Thymidylate Synthase In Inactive Conformation With A Novel Non-Peptidic Inhibitor Length = 325 Back     alignment and structure
>pdb|3N5E|B Chain B, Crystal Structure Of Human Thymidylate Synthase Bound To A Peptide Inhibitor Length = 325 Back     alignment and structure
>pdb|3EHI|X Chain X, Crystal Structure Of Human Thymidyalte Synthase M190k With Loop 181- 197 Stabilized In The Inactive Conformation Length = 313 Back     alignment and structure
>pdb|3EAW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of Chemotherapy With Noncompetitive Inhibitors Length = 355 Back     alignment and structure
>pdb|3GH2|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|2RD8|B Chain B, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 Back     alignment and structure
>pdb|1JU6|A Chain A, Human Thymidylate Synthase Complex With Dump And Ly231514, A Pyrrolo(2,3-D)pyrimidine-Based Antifolate Length = 313 Back     alignment and structure
>pdb|2RD8|A Chain A, Human Thymidylate Synthase Stabilized In Active Conformation By R163k Mutation: Asymmetry And Reactivity Of Cys195 Length = 313 Back     alignment and structure
>pdb|3EF9|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|4GYH|A Chain A, Structure Of Human Thymidylate Synthase At High Salt Conditions Length = 318 Back     alignment and structure
>pdb|3EDW|X Chain X, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|3GG5|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 313 Back     alignment and structure
>pdb|1HVY|A Chain A, Human Thymidylate Synthase Complexed With Dump And Raltitrexed, An Antifolate Drug, Is In The Closed Conformation Length = 288 Back     alignment and structure
>pdb|1HZW|A Chain A, Crystal Structure Of Human Thymidylate Synthase Length = 290 Back     alignment and structure
>pdb|3ED7|A Chain A, Replacement Of Val3 In Human Thymidylate Synthase Affects Its Kinetic Properties And Intracellular Stability Length = 295 Back     alignment and structure
>pdb|3UWL|A Chain A, Crystal Structure Of Enteroccocus Faecalis Thymidylate Synthase (efts) In Complex With 5-formyl Tetrahydrofolate Length = 315 Back     alignment and structure
>pdb|3IX6|A Chain A, Crystal Structure Of Thymidylate Synthase Thya From Brucella Melitensis Length = 360 Back     alignment and structure
>pdb|3UWL|B Chain B, Crystal Structure Of Enteroccocus Faecalis Thymidylate Synthase (efts) In Complex With 5-formyl Tetrahydrofolate Length = 315 Back     alignment and structure
>pdb|3KGB|A Chain A, Crystal Structure Of Thymidylate Synthase 12 FROM ENCEPHALITOZOON Cuniculi At 2.2 A Resolution Length = 294 Back     alignment and structure
>pdb|1BO8|A Chain A, Thymidylate Synthase R178t Mutant Length = 316 Back     alignment and structure
>pdb|1BP6|A Chain A, Thymidylate Synthase R23i, R179t Double Mutant Length = 316 Back     alignment and structure
>pdb|1BO7|A Chain A, Thymidylate Synthase R179t Mutant Length = 316 Back     alignment and structure
>pdb|4DQ1|A Chain A, Thymidylate Synthase From Staphylococcus Aureus. Length = 321 Back     alignment and structure
>pdb|3INV|A Chain A, Trypanosoma Cruzi Dihydrofolate Reductase-Thymidylate Synthase Complexed With Nadph, Dump And C-448 Antifolate Length = 521 Back     alignment and structure
>pdb|2H2Q|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydrofolate Reductase- Thymidylate Synthase Length = 521 Back     alignment and structure
>pdb|1TSV|A Chain A, Thymidylate Synthase R179a Mutant Length = 316 Back     alignment and structure
>pdb|1TSX|A Chain A, Thymidylate Synthase R179e Mutant Length = 316 Back     alignment and structure
>pdb|2G8D|A Chain A, Lactobacillus Casei Thymidylate Synthase Y261w-dump Complex Length = 316 Back     alignment and structure
>pdb|2G86|A Chain A, L. Casei Thymidylate Synthase Y261f In Complex With Substrate, Dump Length = 316 Back     alignment and structure
>pdb|1TSY|A Chain A, Thymidylate Synthase R179k Mutant Length = 316 Back     alignment and structure
>pdb|2G8A|A Chain A, Lactobacillus Casei Y261m In Complex With Substrate, Dump Length = 316 Back     alignment and structure
>pdb|2G89|A Chain A, L. Casei Thymidylate Synthase Y261a In Complex With Substrate, Dump Length = 316 Back     alignment and structure
>pdb|1LCA|A Chain A, Lactobacillus Casei Thymidylate Synthase Ternary Complex With Dump And Cb3717 Length = 316 Back     alignment and structure
>pdb|1VZA|A Chain A, Thymidylate Synthase E60d Mutant Binary Complex With 2'- Deoxyuridine 5'-Monophosphate (Dump) Length = 316 Back     alignment and structure
>pdb|1BP0|A Chain A, Thymidylate Synthase R23i Mutant Length = 316 Back     alignment and structure
>pdb|1VZB|A Chain A, L. Casei Thymidylate Synthase Mutant E60q Binary Complex With Dump Length = 316 Back     alignment and structure
>pdb|1TDA|A Chain A, Structures Of Thymidylate Synthase With A C-Terminal Deletion: Role Of The C-Terminus In Alignment Of DUMP AND CH2H4FOLATE Length = 315 Back     alignment and structure
>pdb|3UM5|A Chain A, Double Mutant (A16v+s108t) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase (Pfdhfr-Ts-T994) COMPLEXED WITH Pyrimethamine, Nadph, And Dump Length = 608 Back     alignment and structure
>pdb|3QGT|A Chain A, Crystal Structure Of Wild-Type Pfdhfr-Ts Complexed With Nadph, Dump And Pyrimethamine Length = 608 Back     alignment and structure
>pdb|3JSU|A Chain A, Quadruple Mutant(N51i+c59r+s108n+i164l) Plasmodium Falciparum Dihydrofolate Reductase-Thymidylate Synthase(Pfdhfr-Ts) Complexed With Qn254, Nadph, And Dump Length = 608 Back     alignment and structure
>pdb|1BPJ|A Chain A, Thymidylate Synthase R178t, R179t Double Mutant Length = 316 Back     alignment and structure
>pdb|1NJC|A Chain A, Thymidylate Synthase, Mutation, N229d With 2'-Deoxycytidine 5'- Monophosphate (Dcmp) Length = 316 Back     alignment and structure
>pdb|1J3I|C Chain C, Wild-Type Plasmodium Falciparum Dihydrofolate Reductase- Thymidylate Synthase (Pfdhfr-Ts) Complexed With Wr99210, Nadph, And Dump Length = 328 Back     alignment and structure
>pdb|1JMI|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 Back     alignment and structure
>pdb|3QJ7|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Thymidylate Synthase (Thya) Bound To Dump Length = 264 Back     alignment and structure
>pdb|3I3R|A Chain A, X-Ray Structure Dihydrofolate ReductaseTHYMIDYLATE SYNTHASE FROM Babesia Bovis At 2.35a Resolution Length = 511 Back     alignment and structure
>pdb|1JMG|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 Back     alignment and structure
>pdb|3NRR|A Chain A, Co-Crystal Structure Of Dihydrofolate Reductase-Thymidylate Synthase From Babesia Bovis With Dump, Raltitrexed And Nadp Length = 515 Back     alignment and structure
>pdb|1JMF|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 Back     alignment and structure
>pdb|2ZKR|QQ Chain q, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 160 Back     alignment and structure
>pdb|1NJA|A Chain A, Thymidylate Synthase, Mutation, N229c With 2'-deoxycytidine 5'- Monophosphate (dcmp) Length = 316 Back     alignment and structure
>pdb|1JMH|A Chain A, Contributions Of Orientation And Hydrogen Bonding To Catalysis In Asn- 229 Mutants Of Thymidylate Synthase Length = 316 Back     alignment and structure
>pdb|3BGX|A Chain A, E. Coli Thymidylate Synthase C146s Mutant Complexed With Dtmp And Mtf Length = 264 Back     alignment and structure
>pdb|1QQQ|A Chain A, Crystal Structure Analysis Of Ser254 Mutant Of Escherichia Coli Thymidylate Synthase Length = 264 Back     alignment and structure
>pdb|3BFI|A Chain A, E. Coli Thymidylate Synthase Y209m Mutant Complexed With 5-nitro-dump Length = 264 Back     alignment and structure
>pdb|2FTN|A Chain A, E. Coli Thymidylate Synthase Y94f Mutant Length = 264 Back     alignment and structure
>pdb|1F4D|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase C146s, L143c Covalently Modified At C143 With N-[tosyl-D-Prolinyl]amino- Ethanethiol Length = 264 Back     alignment and structure
>pdb|1AIQ|A Chain A, Crystal Structure Of Thymidylate Synthase R126e Mutant Length = 264 Back     alignment and structure
>pdb|1KCE|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 Back     alignment and structure
>pdb|2TSC|A Chain A, Structure, Multiple Site Binding, And Segmental Accomodation In Thymidylate Synthase On Binding DUMP AND An Anti-Folate Length = 264 Back     alignment and structure
>pdb|1TLC|A Chain A, Thymidylate Synthase Complexed With Dgmp And Folate Analog 1843u89 Length = 265 Back     alignment and structure
>pdb|2BBQ|A Chain A, Structural Basis For Recognition Of Polyglutamyl Folates By Thymidylate Synthase Length = 264 Back     alignment and structure
>pdb|2VF0|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With 5no2dump And Bw1843u89 Length = 264 Back     alignment and structure
>pdb|1ZPR|A Chain A, E. Coli Thymidylate Synthase Mutant E58q In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 Back     alignment and structure
>pdb|2VET|A Chain A, Crystal Structure Of The Thymidylate Synthase K48q Complexed With Dump Length = 264 Back     alignment and structure
>pdb|1JG0|A Chain A, Crystal Structure Of Escherichia Coli Thymidylate Synthase Complexed With 2'-Deoxyuridine-5'-Monophosphate And N,O-Didansyl-L-Tyrosine Length = 264 Back     alignment and structure
>pdb|1KZJ|A Chain A, Crystal Structure Of Ects W80g/dump/cb3717 Complex Length = 264 Back     alignment and structure
>pdb|1EVF|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Back     alignment and structure
>pdb|1EVG|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli With Unmodified Catalytic Cysteine Length = 264 Back     alignment and structure
>pdb|1EV5|A Chain A, Crystal Structure Analysis Of Ala167 Mutant Of Escherichia Coli Length = 264 Back     alignment and structure
>pdb|1F4G|A Chain A, Crystal Structure Of E. Coli Thymidylate Synthase Complexed With Sp- 876 Length = 264 Back     alignment and structure
>pdb|1CI7|A Chain A, Ternary Complex Of Thymidylate Synthase From Pneumocystis Carinii Length = 297 Back     alignment and structure
>pdb|1EV8|A Chain A, Crystal Structure Analysis Of Cys167 Mutant Of Escherichia Coli Length = 264 Back     alignment and structure
>pdb|1FFL|A Chain A, Crystal Structure Of The Apo-Thymidylate Synthase R166q Mutant Length = 264 Back     alignment and structure
>pdb|1DNA|A Chain A, D221(169)n Mutant Does Not Promote Opening Of The Cofactor Imidazolidine Ring Length = 264 Back     alignment and structure
>pdb|1BQ1|A Chain A, E. Coli Thymidylate Synthase Mutant N177a In Complex With Cb3717 And 2'-Deoxyuridine 5'-Monophosphate (Dump) Length = 264 Back     alignment and structure
>pdb|1NCE|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli Thymidylate Synthase D169c With Dump And The Antifolate Cb3717 Length = 264 Back     alignment and structure
>pdb|2OIP|A Chain A, Crystal Structure Of The S290g Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 519 Back     alignment and structure
>pdb|3HJ3|A Chain A, Crystal Structure Of The Chts-Dhfr F207a Non-Active Site Mut Length = 521 Back     alignment and structure
>pdb|1QZF|A Chain A, Crystal Structure Of Dhfr-Ts From Cryptosporidium Hominis Length = 521 Back     alignment and structure
>pdb|3DL6|A Chain A, Crystal Structure Of The A287fS290G ACTIVE SITE MUTANT OF Ts-Dhfr From Cryptosporidium Hominis Length = 521 Back     alignment and structure
>pdb|3DL5|A Chain A, Crystal Structure Of The A287f Active Site Mutant Of Ts- Dhfr From Cryptosporidium Hominis Length = 521 Back     alignment and structure
>pdb|1S1I|Q Chain Q, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From Yeast Obtained By Docking Atomic Models For Rna And Protein Components Into A 11.7 A Cryo-Em Map. This File, 1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is In File 1s1h Length = 100 Back     alignment and structure
>pdb|3IZS|U Chain U, Localization Of The Large Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 160 Back     alignment and structure
>pdb|3JYW|Q Chain Q, Structure Of The 60s Proteins For Eukaryotic Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 116 Back     alignment and structure
>pdb|3IZR|U Chain U, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 164 Back     alignment and structure
>pdb|3IZR|U Chain U, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 164 Back     alignment and structure
>pdb|4F2V|A Chain A, Crystal Structure Of De Novo Designed Serine Hydrolase, Northeast Structural Genomics Consortium (Nesg) Target Or165 Length = 272 Back     alignment and structure
>pdb|3ZF7|U Chain U, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 159 Back     alignment and structure
>pdb|3ZF7|U Chain U, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 159 Back     alignment and structure
>pdb|4A17|P Chain P, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 5s Rrna, 5.8s Rrna And Proteins Of Molecule 2. Length = 157 Back     alignment and structure
>pdb|4A17|P Chain P, T.Thermophila 60s Ribosomal Subunit In Complex With Initiation Factor 6. This File Contains 5s Rrna, 5.8s Rrna And Proteins Of Molecule 2. Length = 157 Back     alignment and structure
>pdb|1TIS|A Chain A, Crystal Structure Of Thymidylate Synthase From T4 Phage Length = 286 Back     alignment and structure
>pdb|1B02|A Chain A, Crystal Structure Of Thymidylate Synthase A From Bacillus Subtilis Length = 279 Back     alignment and structure
>pdb|1BKO|A Chain A, Thermostable Thymidylate Synthase A From Bacillus Subtilis Length = 278 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query875
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 7e-51
3ugj_A 1303 Phosphoribosylformylglycinamidine synthase; amidot 2e-29
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 1e-27
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 3e-10
3ed7_A295 Tsase, TS, thymidylate synthase; transferase, meth 2e-32
3kgb_A294 Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI 4e-32
1j3k_C328 Bifunctional dihydrofolate reductase-thymidylate s 4e-32
1hw4_A355 TS, thymidylate synthase; methyltransferase, trans 1e-31
1bkp_A278 Thymidylate synthase A; methyltransferase, DTMP sy 7e-31
1tis_A286 Thymidylate synthase; transferase(methyltransferas 9e-31
2g8o_A264 TS, tsase, thymidylate synthase; methyltransferase 1e-30
3qj7_A264 TS, tsase, thymidylate synthase; thymidilate synth 1e-30
3nrr_A515 Dihydrofolate reductase-thymidylate synthase; stru 3e-30
3irm_A521 Bifunctional dihydrofolate reductase-thymidylate; 3e-30
3qg2_A608 Bifunctional dihydrofolate reductase-thymidylate; 4e-30
3ix6_A360 TS, tsase, thymidylate synthase; niaid, ssgcid, se 4e-30
1f28_A297 Thymidylate synthase; beta-sheet, protein-inhibito 6e-30
4dq1_A321 TS, tsase, thymidylate synthase; structural genomi 7e-30
3ik0_A316 TS, tsase, thymidylate synthase; transferase, nucl 8e-30
2aaz_A317 TS, tsase, thymidylate synthase; methyl transferas 1e-29
3hj3_A521 Chain A, crystal structure of DHFR; TS, enzyme, cr 2e-28
1b5e_A246 Protein (deoxycytidylate hydroxymethylase); DNTP s 5e-27
3v8h_A327 TS, tsase, thymidylate synthase; ssgcid, structura 1e-26
1vq8_Q96 50S ribosomal protein L21E; ribosome 50S, protein- 4e-20
1vq8_Q96 50S ribosomal protein L21E; ribosome 50S, protein- 2e-13
3izc_U160 60S ribosomal protein RPL21 (L21E); eukaryotic rib 7e-20
3izc_U160 60S ribosomal protein RPL21 (L21E); eukaryotic rib 5e-12
3iz5_U164 60S ribosomal protein L21 (L21E); eukaryotic ribos 4e-19
3iz5_U164 60S ribosomal protein L21 (L21E); eukaryotic ribos 3e-10
4a17_P157 RPL21, 60S ribosomal protein L21; eukaryotic ribos 6e-19
4a17_P157 RPL21, 60S ribosomal protein L21; eukaryotic ribos 2e-12
2zkr_q160 60S ribosomal protein L21; protein-RNA complex, 60 1e-18
2zkr_q160 60S ribosomal protein L21; protein-RNA complex, 60 4e-13
3jyw_Q116 60S ribosomal protein L21(A); eukaryotic ribosome, 6e-17
3jyw_Q116 60S ribosomal protein L21(A); eukaryotic ribosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 6e-09
3ac6_A725 Phosphoribosylformylglycinamidine synthase 2; puri 1e-06
1vk3_A615 Phosphoribosylformylglycinamidine synthase II; TM1 1e-04
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 5e-04
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 Back     alignment and structure
 Score =  193 bits (492), Expect = 7e-51
 Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 21/206 (10%)

Query: 572  FKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQP 631
             +  +  N++ V +E   TL + W  T++++++L+ N +CAD+E+ +      P      
Sbjct: 970  DRFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDTDPGLNV-- 1027

Query: 632  VRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMA 691
                               K  +    D             +AVLRE+G+N   EM+A  
Sbjct: 1028 -------------------KLSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAF 1068

Query: 692  QVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQL 751
               GF+  D+ + DLL  +I L  F  LV  GGFSY D LG+ +GWA S+L N  ++ + 
Sbjct: 1069 HRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEF 1128

Query: 752  NKFIARSDTFSFGVCNGCQLMNLLGW 777
              F  R  T + GVCNGCQ+M+ L  
Sbjct: 1129 ETFFHRPQTLALGVCNGCQMMSNLRE 1154


>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 Back     alignment and structure
>3ed7_A Tsase, TS, thymidylate synthase; transferase, methyltransferase, nucleotide biosynthesis; 1.56A {Homo sapiens} PDB: 3ebu_A* 1hvy_A* 1ypv_A* 1hw3_A* 2onb_A* 3eaw_X* 3gg5_A 3gh0_A 3ef9_A 3edw_X 3ejl_A* 3gh2_X* 2rd8_A* 2rda_A 3h9k_A* 3hb8_A* 3ob7_A* 1ju6_A* 1juj_A* 3egy_X* ... Length = 295 Back     alignment and structure
>3kgb_A Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI, UW, decode, methyltransferase, nucleotide biosynt transferase, structural genomics; 2.20A {Encephalitozoon cuniculi} Length = 294 Back     alignment and structure
>1j3k_C Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: d.117.1.1 PDB: 1j3i_C* 1j3j_C* 3dg8_C* 3dga_C* Length = 328 Back     alignment and structure
>1hw4_A TS, thymidylate synthase; methyltransferase, transferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1 PDB: 3n5e_A 3n5g_A* Length = 355 Back     alignment and structure
>1bkp_A Thymidylate synthase A; methyltransferase, DTMP synthase; 1.70A {Bacillus subtilis} SCOP: d.117.1.1 PDB: 1bko_A 1bsf_A 1bsp_A 1b02_A* Length = 278 Back     alignment and structure
>1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1 Length = 286 Back     alignment and structure
>2g8o_A TS, tsase, thymidylate synthase; methyltransferase, DUMP, antifolate, high-resolution, ternar complex, beta sheet, alpha/beta protein; HET: CXM UMP CB3; 1.30A {Escherichia coli} SCOP: d.117.1.1 PDB: 1aob_A* 1f4c_A* 1f4e_A* 1f4f_A* 1jtq_A* 1jtu_A* 1jut_A* 1kce_A* 1kzi_A* 1tls_A* 1tsn_A* 1f4b_A* 2bbq_A* 2ftq_A* 2a9w_A* 2kce_A* 3b9h_A* 3bhl_A* 3bhr_A* 3tms_A ... Length = 264 Back     alignment and structure
>3qj7_A TS, tsase, thymidylate synthase; thymidilate synthase, structural genomics, TB structural GEN consortium, TBSGC, transferase; HET: UMP SPM; 2.50A {Mycobacterium tuberculosis} Length = 264 Back     alignment and structure
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A* Length = 515 Back     alignment and structure
>3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A* Length = 521 Back     alignment and structure
>3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 3qgt_A* Length = 608 Back     alignment and structure
>3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis} Length = 360 Back     alignment and structure
>1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A* Length = 297 Back     alignment and structure
>4dq1_A TS, tsase, thymidylate synthase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: UMP; 2.71A {Staphylococcus aureus} Length = 321 Back     alignment and structure
>3ik0_A TS, tsase, thymidylate synthase; transferase, nucleotide synthase, methyltransferase, nucleot biosynthesis; HET: 7C1 UMP; 2.10A {Lactobacillus casei} PDB: 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 1tdb_A* 1tda_A* ... Length = 316 Back     alignment and structure
>3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A* Length = 521 Back     alignment and structure
>1b5e_A Protein (deoxycytidylate hydroxymethylase); DNTP synthesizing complex, transferase; HET: DCM; 1.60A {Enterobacteria phage T4} SCOP: d.117.1.1 PDB: 1b49_A* 1b5d_A* Length = 246 Back     alignment and structure
>3v8h_A TS, tsase, thymidylate synthase; ssgcid, structural genomics, seattle S genomics center for infectious disease, transferase; HET: CIT; 1.65A {Burkholderia thailandensis} Length = 327 Back     alignment and structure
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ... Length = 96 Back     alignment and structure
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ... Length = 96 Back     alignment and structure
>4a17_P RPL21, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_P 4a1c_P 4a1e_P Length = 157 Back     alignment and structure
>4a17_P RPL21, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_P 4a1c_P 4a1e_P Length = 157 Back     alignment and structure
>2zkr_q 60S ribosomal protein L21; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Length = 160 Back     alignment and structure
>2zkr_q 60S ribosomal protein L21; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Length = 160 Back     alignment and structure
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q Length = 116 Back     alignment and structure
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q Length = 116 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Length = 213 Back     alignment and structure
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query875
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 100.0
3ac6_A725 Phosphoribosylformylglycinamidine synthase 2; puri 100.0
1vk3_A615 Phosphoribosylformylglycinamidine synthase II; TM1 99.96
1vq8_Q96 50S ribosomal protein L21E; ribosome 50S, protein- 99.78
3j21_R97 50S ribosomal protein L21E; archaea, archaeal, KIN 99.78
3jyw_Q116 60S ribosomal protein L21(A); eukaryotic ribosome, 99.75
2zkr_q160 60S ribosomal protein L21; protein-RNA complex, 60 99.72
3iz5_U164 60S ribosomal protein L21 (L21E); eukaryotic ribos 99.71
3izc_U160 60S ribosomal protein RPL21 (L21E); eukaryotic rib 99.71
4a17_P157 RPL21, 60S ribosomal protein L21; eukaryotic ribos 99.71
4hcj_A177 THIJ/PFPI domain protein; structural genomics, PSI 99.52
3jyw_Q116 60S ribosomal protein L21(A); eukaryotic ribosome, 99.48
1vk3_A615 Phosphoribosylformylglycinamidine synthase II; TM1 99.46
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.41
3ugj_A 1303 Phosphoribosylformylglycinamidine synthase; amidot 99.41
2zkr_q160 60S ribosomal protein L21; protein-RNA complex, 60 99.38
3iz5_U164 60S ribosomal protein L21 (L21E); eukaryotic ribos 99.36
4a17_P157 RPL21, 60S ribosomal protein L21; eukaryotic ribos 99.36
3l18_A168 Intracellular protease I; gatase1_PFPI_LIKE, hydro 99.36
3izc_U160 60S ribosomal protein RPL21 (L21E); eukaryotic rib 99.36
4gdh_A194 DJ-1, uncharacterized protein C22E12.03C; unknown 99.35
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.35
2yxz_A311 Thiamin-monophosphate kinase; alpha/beta structure 99.3
3ac6_A725 Phosphoribosylformylglycinamidine synthase 2; puri 99.27
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 99.26
2vrn_A190 Protease I, DR1199; cysteine sulfenic acid, DJ-1/T 99.2
3l3b_A242 ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, 99.19
1vq8_Q96 50S ribosomal protein L21E; ribosome 50S, protein- 99.17
4e08_A190 DJ-1 beta; flavodoxin-like fold, stress response, 99.17
2z1e_A338 Hydrogenase expression/formation protein HYPE; [NI 99.14
2ab0_A205 YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase 99.13
2rk3_A197 Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha 99.13
3cne_A175 Putative protease I; structural genomics, PSI-2, M 99.11
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.1
3ot1_A208 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate 99.1
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.09
3fd5_A394 Selenide, water dikinase 1; selenophosphate synthe 99.08
2z01_A348 Phosphoribosylformylglycinamidine cyclo-ligase; al 99.08
3n7t_A247 Macrophage binding protein; seattle structural gen 99.05
1u9c_A224 APC35852; structural genomics, protein structure i 99.01
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 99.01
3f5d_A206 Protein YDEA; unknow protein, PSI-II, nysgrc, stru 99.0
3kkl_A244 Probable chaperone protein HSP33; peptidase, heat 99.0
3j21_R97 50S ribosomal protein L21E; archaea, archaeal, KIN 98.99
2fex_A188 Conserved hypothetical protein; structural genomic 98.99
1q7r_A219 Predicted amidotransferase; structural genomics, Y 98.98
3uk7_A 396 Class I glutamine amidotransferase-like domain-CO 98.98
3fse_A 365 Two-domain protein containing DJ-1/THIJ/PFPI-like 98.98
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 98.96
3mcq_A319 Thiamine-monophosphate kinase; structural genomics 98.96
3vti_C314 Hydrogenase maturation factor; transferase, carbam 98.96
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 98.96
2btu_A346 Phosphoribosyl-aminoimidazole synthetase; synthase 98.95
3gra_A202 Transcriptional regulator, ARAC family; transcript 98.94
3mgk_A211 Intracellular protease/amidase related enzyme (THI 98.94
3noq_A231 THIJ/PFPI family protein; DJ-1 superfamily, isocya 98.93
3kgb_A294 Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI 98.92
3ewn_A253 THIJ/PFPI family protein; monomer, PSI nysgrc, str 98.91
3efe_A212 THIJ/PFPI family protein; structural GEN csgid, ce 98.91
2aaz_A317 TS, tsase, thymidylate synthase; methyl transferas 98.91
1rw7_A243 YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI supe 98.9
1f28_A297 Thymidylate synthase; beta-sheet, protein-inhibito 98.9
1j3k_C328 Bifunctional dihydrofolate reductase-thymidylate s 98.9
3ed7_A295 Tsase, TS, thymidylate synthase; transferase, meth 98.9
3qj7_A264 TS, tsase, thymidylate synthase; thymidilate synth 98.9
1hw4_A355 TS, thymidylate synthase; methyltransferase, trans 98.9
3u0o_A347 Selenide, water dikinase; ATP binding protein, sel 98.89
3er6_A209 Putative transcriptional regulator protein; struct 98.89
2yyd_A345 Selenide, water dikinase; FULL-length selenophosph 98.89
2g8o_A264 TS, tsase, thymidylate synthase; methyltransferase 98.88
1tis_A286 Thymidylate synthase; transferase(methyltransferas 98.86
1bkp_A278 Thymidylate synthase A; methyltransferase, DTMP sy 98.85
4dq1_A321 TS, tsase, thymidylate synthase; structural genomi 98.85
3uwl_A315 TS, tsase, thymidylate synthase; methyltransferase 98.84
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 98.83
3v8h_A327 TS, tsase, thymidylate synthase; ssgcid, structura 98.82
3ix6_A360 TS, tsase, thymidylate synthase; niaid, ssgcid, se 98.81
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 98.81
3bhn_A236 THIJ/PFPI domain protein; structural genomics, joi 98.79
3nrr_A515 Dihydrofolate reductase-thymidylate synthase; stru 98.78
2a9v_A212 GMP synthase; structural genomics, joint center fo 98.78
3l7n_A236 Putative uncharacterized protein; glutamine amidot 98.78
1vhq_A232 Enhancing lycopene biosynthesis protein 2; structu 98.77
2rb9_A334 HYPE protein; hydrogenase maturation, dimer, enzym 98.77
3irm_A521 Bifunctional dihydrofolate reductase-thymidylate; 98.77
3m3p_A250 Glutamine amido transferase; structural genomics, 98.77
3hj3_A521 Chain A, crystal structure of DHFR; TS, enzyme, cr 98.76
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 98.76
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 98.76
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 98.75
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 98.73
1n57_A291 Chaperone HSP31, protein YEDU; alpha-beta sandwich 98.73
3uow_A 556 GMP synthetase; structural genomics consortium, SG 98.72
1b5e_A246 Protein (deoxycytidylate hydroxymethylase); DNTP s 98.72
3ej6_A688 Catalase-3; heme, hydrogen iron, metal-binding, ox 98.72
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 98.71
3qg2_A608 Bifunctional dihydrofolate reductase-thymidylate; 98.71
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 98.71
2zod_A345 Selenide, water dikinase; FULL-length selenophosph 98.7
3ttv_A753 Catalase HPII; heme orientation, oxidoreductase; H 98.7
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 98.67
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 98.67
2z1u_A343 Hydrogenase expression/formation protein HYPE; alp 98.63
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 98.57
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 98.49
1sy7_A715 Catalase 1; heme oxidation, singlet oxygen, oxidor 98.49
2iuf_A688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 98.49
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 98.48
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 98.47
3m84_A350 Phosphoribosylformylglycinamidine cyclo-ligase; al 98.45
1i1q_B192 Anthranilate synthase component II; tryptophan bio 98.45
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 98.44
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 98.41
3p4e_A349 Phosphoribosylformylglycinamidine cyclo-ligase; st 98.4
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 98.32
2v9y_A334 Phosphoribosylformylglycinamidine cyclo-ligase; mu 98.26
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 98.26
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 98.19
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 98.08
1vco_A550 CTP synthetase; tetramer, riken structural genomic 97.96
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 97.87
3c9u_A342 Thiamine monophosphate kinase; beta barrel, alpha- 97.83
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 97.81
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 95.47
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 95.25
3en0_A291 Cyanophycinase; serine protease, beta peptide spec 93.63
3rht_A259 (gatase1)-like protein; structural genomics, PSI-b 84.6
2zuv_A 759 Lacto-N-biose phosphorylase; beta-alpha-barrel, TI 84.58
4e5v_A281 Putative THUA-like protein; THUA-like proteins, tr 83.83
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-93  Score=887.42  Aligned_cols=612  Identities=24%  Similarity=0.327  Sum_probs=495.3

Q ss_pred             CeeeeCCCCcCccccccccccccccCCCC------CCCcccE--------EEecccccccCCCCc-ccccccCCCCCCCC
Q psy5570           1 MYLGIHPGAFSRVPYHGAHSSQHIRAPGP------EQRHAPC--------ISHIVTLTSYISIPQ-VFTLARAPGFPTTA   65 (875)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~~~~~~~l~~~~P~-~~~~~~~~~~~~~~   65 (875)
                      |++++.|++.+++..    +++++++|..      +.+++.+        ++|+|...|++++|+ +|+.+++++...+.
T Consensus       559 ml~~V~pe~~~~~~~----~~~~~g~~a~vIG~Vt~~~~v~l~~~~~g~~v~dlp~~~L~~~~p~~~~~~~~~~~~~~~~  634 (1303)
T 3ugj_A          559 YVLAVAADQLPLFDE----LCKRERAPYAVIGDATEEQHLSLHDNHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGDAL  634 (1303)
T ss_dssp             EEEEECGGGHHHHHH----HHHHHTCCEEEEEEEESSCEEEEEETTTTEEEEEEEHHHHTCCCCCCEEEECCCCCCCCCC
T ss_pred             EEEEECHHHHHHHHH----HHHHcCCCeEEEEEEecCCeEEEEECCCCeEEEecchhhhcCCCCceeccccccCcccccc
Confidence            689999999999999    9999999875      4444443        489999889999999 99998875544444


Q ss_pred             CCCCCcCHHHHHHHHhcCcccccccceeecccccccceeEeccccCCCCCCcCceEEEEEecCCcEEEEEEecCCCcccc
Q psy5570          66 HTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGL  145 (875)
Q Consensus        66 ~~p~~~dl~~~l~~vL~~pnVaSK~~l~~qyD~~Vgg~tv~~P~vGp~~~p~sDaaV~~~~~~~~~g~ams~G~~p~~~~  145 (875)
                      ..+ ..+++++|+++|++||||||+||++||||+|||+||++|+|||||.|++||||++++.++.+|+|||+|++|+++.
T Consensus       635 ~~~-~~~~~~~l~~vL~~pnvaSK~~l~~~~D~~V~g~tv~~~~vGp~q~p~~DaAVi~~~~~~~~gla~s~g~~p~~~~  713 (1303)
T 3ugj_A          635 NRA-DITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPVAL  713 (1303)
T ss_dssp             CCT-TCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTTCSCEEEEEEEECGGGGG
T ss_pred             CcC-cCCHHHHHHHHhcCCcccchhhHHHhcCcccCcceeeeccccCCCCCCCCeEEEEEeCCCCeEEEEEEecCCCccc
Confidence            433 4689999999999999999999999999999999999999999999999999999876688999999999999999


Q ss_pred             cCHHHHHHHHHHHHHhhccccCCcccccceeccccccccccCCcccccccCcc-hhcccccccccchH-HhhhhcCCccc
Q psy5570         146 VDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHG-IYDHLDRSQCLPIR-YVDDNNKITED  223 (875)
Q Consensus       146 ~dPy~GA~~AV~EAl~Nlva~g~~~l~~i~ls~n~~~~~~~~~~~~w~~g~P~-l~~a~~a~~~~~l~-d~~~~lgiP~i  223 (875)
                      +|||+||++||+||++||+|+|+.+++++++|+|||          |++++|+ ..++.++  ++|+. |+|++||+|+|
T Consensus       714 ~dP~~ga~~AVaealsnlaA~Ga~pl~~v~lsln~~----------~~~g~P~~~~~L~~a--~~g~~~d~c~~lgvpii  781 (1303)
T 3ugj_A          714 LDFAASARLAVGEALTNIAATQIGDIKRIKLSANWM----------AAAGHPGEDAGLYDA--VKAVGEELCPQLGLTIP  781 (1303)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTSCCCSGGGCEEEEEEE----------CBTTSTTHHHHHHHH--HHHHHTTHHHHHTCEEE
T ss_pred             cCHHHHHHHHHHHHHHHhhcCCCccHHHeEeecccc----------cccCCCchHHHHHHH--HHHHHHHHHHHcCCCee
Confidence            999999999999999999999998999999999999          8889997 3333333  99999 99999999999


Q ss_pred             CCCCCCCCCCc------cccccccccc-cccccccccccCCCccccCCCcceecceeeecccEEEEcccccccccccccc
Q psy5570         224 YPMNPNGSPGK------RERKKKTGRY-LGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK  296 (875)
Q Consensus       224 ~gkdsm~~~~~------~~~~~~~~~~-~~~~~~~si~~g~p~kd~~g~Tg~v~~~~~~a~g~~v~k~v~~ritp~l~~~  296 (875)
                      ||||||||..+      .+.+..|+++ +++++                             .  +.++           
T Consensus       782 GGkdSlsn~t~~~~~g~~~~v~~P~TlvitavG-----------------------------~--v~dv-----------  819 (1303)
T 3ugj_A          782 VGKDSMSMKTRWQEGNEQREMTSPLSLVISAFA-----------------------------R--VEDV-----------  819 (1303)
T ss_dssp             EEEEECBCEEEECCC--CEEEECCCEEEEEEEE-----------------------------E--ESCG-----------
T ss_pred             eccccCccceecccCCCcCccCCCCceEEEEEE-----------------------------E--CCCc-----------
Confidence            99999998331      1122223333 11111                             0  0111           


Q ss_pred             cCCCCCcceEEEEEEeeCCcccccccccccccccchhHHHHHHHHHHHHHHhhccccccccccCCCCccCCccccccccc
Q psy5570         297 ISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGYRRGTRDLFSRPF  376 (875)
Q Consensus       297 ~~~sk~~~s~laq~~v~~g~l~~~l~qrS~D~~Lg~~fn~~qya~l~~~~a~~~~l~~~~~m~~skG~r~~Tr~~~Sk~f  376 (875)
                                                                                              ++.++++|
T Consensus       820 ------------------------------------------------------------------------~~~vt~~~  827 (1303)
T 3ugj_A          820 ------------------------------------------------------------------------RHTLTPQL  827 (1303)
T ss_dssp             ------------------------------------------------------------------------GGCCCSCC
T ss_pred             ------------------------------------------------------------------------CcccCccc
Confidence                                                                                    12344455


Q ss_pred             cccCCCCcceeeEEeecCCE-EEE-ecccccccCccccccCCcccccCC--CCCCCCCcccCchHHHHHHHHHHH-hH--
Q psy5570         377 RRHGTIPLSVYMKVYKVGDI-VDI-KCAESFYDRMTECVYSSPLTSFNH--GIKPDPWFYVDVMGKGKVAFNSNS-LV--  449 (875)
Q Consensus       377 r~~G~~pls~~l~~yk~GD~-V~I-~~~~sv~kg~p~~~~g~~~~v~~~--G~~p~~~~~~~~~~~~~~~f~~~~-li--  449 (875)
                      ++              .||. ++| .+...-.-|-+ .    +.+++|+  |..|+    +|+.+.++.+|+.++ ++  
T Consensus       828 k~--------------~Gd~LilV~lg~~~~~LGGS-~----la~~~g~~g~~~P~----vd~~~~lk~~~~~v~~li~~  884 (1303)
T 3ugj_A          828 ST--------------EDNALLLIDLGKGHNALGAT-A----LAQVYRQLGDKPAD----VRDVAQLKGFYDAMQALVAA  884 (1303)
T ss_dssp             CC--------------SSEEEEEEETTTTCCCCTTS-H----HHHHTTCCCSCCCC----CCCHHHHHHHHHHHHHHHHT
T ss_pred             CC--------------CCCEEEEEECCCCCCCccHH-H----HHHHhCcccCCCCC----CCCHHHHHHHHHHHHHHHHc
Confidence            42              2443 233 11110000001 1    1345666  45888    877889999999999 77  


Q ss_pred             -HhhhhcccCC-ChHHHHhcCCcccccCCCCCCCceEEEeCCcchhHHHHhhhhccccchhhhhhhhcchhhhhhccccc
Q psy5570         450 -FFQCAESFYD-RMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEV  527 (875)
Q Consensus       450 -~i~s~hdvsD-GL~~al~eMa~~~~~~G~~~~~~~~Idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~LFsE~~  527 (875)
                       .|.|+||+|| ||+++|+||| |++++|++      ||+...+                        .+++..||+|++
T Consensus       885 G~v~AahDvSdGGLa~aL~Ema-~as~vG~~------Idl~~ip------------------------~~~~~~LF~E~~  933 (1303)
T 3ugj_A          885 RKLLAWHDRSDGGLLVTLAEMA-FAGHCGVQ------VDIAALG------------------------DDHLAALFNEEL  933 (1303)
T ss_dssp             TCCSEEEECCTTHHHHHHHHHH-HHHTSEEE------EECGGGC------------------------SCHHHHHHCCCS
T ss_pred             CCeEEEEeCCCChHHHHHHHHH-HhCCceEE------EEecCCC------------------------CchhHHHhCCCC
Confidence             7999999999 8999999999 99999999      8875322                        123467999999


Q ss_pred             eee--EecCCHHHHHHHHHhhcCCCCCCCc--eeecccccCcccccceeeEEEEECCEeeccccHHHHHHHHHHHHHHHH
Q psy5570         528 GLA--FDEWDLEYYTDIFRNKLKRNPTSVE--CFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELE  603 (875)
Q Consensus       528 G~v--v~~~d~~~v~~~f~~~l~r~p~~ve--~~~IGqvnseh~~h~~~~~~i~~~g~~i~~~~l~~L~~~w~~ts~~i~  603 (875)
                      |++  |.+++.+.+.++++.      .++.  +..||+++++      ..++|..+|+.+.+.++++|+++|++||+.|+
T Consensus       934 G~vv~V~~~~~~~v~~~l~~------~gi~~~a~~IG~V~~~------~~l~i~~~g~~~~~~~~~~l~~~w~~ts~~~~ 1001 (1303)
T 3ugj_A          934 GGVIQVRAEDRDAVEALLAQ------YGLADCVHYLGQALAG------DRFVITANDQTVFSESRTTLRVWWAETTWQMQ 1001 (1303)
T ss_dssp             EEEEEEEGGGHHHHHHHHHH------TTCGGGEEEEEEEESS------SEEEEEETTEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEHHHHHHHHHHHHh------CCCCCceEEEEEEcCC------CcEEEEECCEEEEEccHHHHHHHHHHHHHHhh
Confidence            987  566777888888876      5666  7899999876      46888889999989999999999999999999


Q ss_pred             hhhcCccchhhhhhhccccCCCcee----cCCCCcccccccccccccccCCcccCCCCccccccccccccceEEEEEecC
Q psy5570         604 KLQMNARCADEEYNSLVTRIGPKYQ----YQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREE  679 (875)
Q Consensus       604 ~~~~np~~a~~e~~~~~~~~~p~~~----f~p~~~~~~~~~~~~~~~~~~~thn~p~~~~p~~ga~~~~~~~kVaIlv~p  679 (875)
                      ++|+||.|+++|++.+.++.+|+++    |+|. ++..                     .|+.   ...++|||+||+||
T Consensus      1002 ~~~~~~~~~~~e~~~~~~~~~p~~~~~~~~~~~-~~~~---------------------~~~~---~~~~~pkVaIi~~~ 1056 (1303)
T 3ugj_A         1002 RLRDNPQCADQEHEAKANDTDPGLNVKLSFDIN-EDIA---------------------APYI---ATGARPKVAVLREQ 1056 (1303)
T ss_dssp             HHHSCHHHHHHHHHHTTCTTCCCSCCBCSSCTT-CCTT---------------------HHHH---TTTCCCEEEEEECT
T ss_pred             ccccCchhhHHhhhhhccccCCCcccccccccc-cccc---------------------cccc---ccCCCCEEEEEecC
Confidence            9999999999999888776667654    3332 1000                     1111   22478999999999


Q ss_pred             CCCCHHHHHHHHHHcCCeeEEEEeecccccccCccCccEEEEcCCcCccccccchhHHHHHHhhchhHHHHHHHHHHCCC
Q psy5570         680 GINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSD  759 (875)
Q Consensus       680 G~n~~~e~~~A~~~aG~~v~~V~~~dl~~~~~~l~~~d~lvlPGGfS~gD~l~~s~~~a~ail~~~~i~~~v~~f~~r~g  759 (875)
                      |+||++|+++||+++|+++.+|+++|+..++..|++||+|||||||||||+|+++++|+.+.++++.++++|++|+.++|
T Consensus      1057 G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g 1136 (1303)
T 3ugj_A         1057 GVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQ 1136 (1303)
T ss_dssp             TCCCHHHHHHHHHHTTCEEEEEEHHHHHTTSCCGGGCSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSS
T ss_pred             CcCCHHHHHHHHHHhCCceEEEeecccccCcccHhhCCEEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCC
Confidence            99999999999999999999999988888888899999999999999999999999999999999999999999887679


Q ss_pred             ceEEEEehhHHHHHhc-CCCCCCc--cccccCCCCeEEeccEEec--cC------Cc--eEEEeecce-----eecCHHH
Q psy5570         760 TFSFGVCNGCQLMNLL-GWFSVST--QARQPYIKSRVRCPPLKKE--KS------GV--NITRLSITL-----NFSTSDT  821 (875)
Q Consensus       760 ~~vLGICnGfQiL~el-GlLpg~~--~t~~~n~~~~f~~~~v~v~--~~------~~--~~~r~pi~~-----~f~~~~~  821 (875)
                      +|+||||||||||+++ |||||..  +++.+|.++||+||||.+.  ++      ++  ..+.+||+|     +|+++++
T Consensus      1137 ~pvLGICnG~QlL~e~~gllPg~~~~p~l~~N~s~~f~~r~~~~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~ 1216 (1303)
T 3ugj_A         1137 TLALGVCNGCQMMSNLRELIPGSELWPRFVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAH 1216 (1303)
T ss_dssp             CEEEEETHHHHHHHTTGGGSTTCTTCCEEECCTTSSCEEEEEEEEECCCSCGGGTTCTTCEEEEEEEESSCEEECSSHHH
T ss_pred             CcEEEECHHHHHHHHhcCcCCCCCCCCeEecCCCCCeEEeCeEEEECCCCChhhhccCCCEEeeeeEeCCCCeeeCCHHH
Confidence            9999999999999999 9999985  6679999999999999983  21      33  588889999     4567788


Q ss_pred             HHHHHhCCCceee
Q psy5570         822 LSWLLDSNTNVTV  834 (875)
Q Consensus       822 l~~l~~~~~~~~~  834 (875)
                      +++|++|||-++.
T Consensus      1217 l~~l~~~~~v~~r 1229 (1303)
T 3ugj_A         1217 LAALESKGLVALR 1229 (1303)
T ss_dssp             HHHHHHTTCEEEE
T ss_pred             HHHHHhCCcEEEE
Confidence            9999999996553



>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Back     alignment and structure
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ... Back     alignment and structure
>3j21_R 50S ribosomal protein L21E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} Back     alignment and structure
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q Back     alignment and structure
>2zkr_q 60S ribosomal protein L21; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Back     alignment and structure
>4a17_P RPL21, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_P 4a1c_P 4a1e_P Back     alignment and structure
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii} Back     alignment and structure
>3jyw_Q 60S ribosomal protein L21(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_Q Back     alignment and structure
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>2zkr_q 60S ribosomal protein L21; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Back     alignment and structure
>4a17_P RPL21, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_P 4a1c_P 4a1e_P Back     alignment and structure
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A Back     alignment and structure
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus} Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} Back     alignment and structure
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis} Back     alignment and structure
>1vq8_Q 50S ribosomal protein L21E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_Q* 1vq5_Q* 1vq6_Q* 1vq7_Q* 1s72_Q* 1vq9_Q* 1vqk_Q* 1vql_Q* 1vqm_Q* 1vqn_Q* 1vqo_Q* 1vqp_Q* 1yhq_Q* 1yi2_Q* 1yij_Q* 1yit_Q* 1yj9_Q* 1yjn_Q* 1yjw_Q* 2otj_Q* ... Back     alignment and structure
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster} Back     alignment and structure
>2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A Back     alignment and structure
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... Back     alignment and structure
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0 Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A* Back     alignment and structure
>2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus} Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2 Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} Back     alignment and structure
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A* Back     alignment and structure
>3j21_R 50S ribosomal protein L21E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} Back     alignment and structure
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2 Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} Back     alignment and structure
>3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis} Back     alignment and structure
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida} Back     alignment and structure
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A Back     alignment and structure
>3kgb_A Thymidylate synthase 1/2; ssgcid, NIH, niaid, SBRI, UW, decode, methyltransferase, nucleotide biosynt transferase, structural genomics; 2.20A {Encephalitozoon cuniculi} SCOP: d.117.1.1 Back     alignment and structure
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV} Back     alignment and structure
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis} Back     alignment and structure
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A Back     alignment and structure
>1f28_A Thymidylate synthase; beta-sheet, protein-inhibitor complex, transferase; HET: UMP F89; 1.90A {Pneumocystis carinii} SCOP: d.117.1.1 PDB: 1ci7_A* Back     alignment and structure
>1j3k_C Bifunctional dihydrofolate reductase-thymidylate synthase; oxidoreductase, transferase; HET: WRA NDP UMP; 2.10A {Plasmodium falciparum} SCOP: d.117.1.1 PDB: 1j3i_C* 1j3j_C* 3dg8_C* 3dga_C* Back     alignment and structure
>3ed7_A Tsase, TS, thymidylate synthase; transferase, methyltransferase, nucleotide biosynthesis; 1.56A {Homo sapiens} SCOP: d.117.1.1 PDB: 3ebu_A* 1hvy_A* 1ypv_A* 1hw3_A* 2onb_A* 3eaw_X* 3gg5_A 3gh0_A 3ef9_A 3edw_X 3ejl_A* 3gh2_X* 4gyh_A 4h1i_A 2rd8_A* 2rda_A 3h9k_A* 3hb8_A* 3ob7_A* 1ju6_A* ... Back     alignment and structure
>3qj7_A TS, tsase, thymidylate synthase; thymidilate synthase, structural genomics, TB structural GEN consortium, TBSGC, transferase; HET: UMP SPM; 2.50A {Mycobacterium tuberculosis} SCOP: d.117.1.1 Back     alignment and structure
>1hw4_A TS, thymidylate synthase; methyltransferase, transferase; HET: CME; 2.06A {Homo sapiens} SCOP: d.117.1.1 PDB: 3n5e_A 3n5g_A* Back     alignment and structure
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli} Back     alignment and structure
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>2g8o_A TS, tsase, thymidylate synthase; methyltransferase, DUMP, antifolate, high-resolution, ternar complex, beta sheet, alpha/beta protein; HET: CXM UMP CB3; 1.30A {Escherichia coli} SCOP: d.117.1.1 PDB: 1aob_A* 1f4c_A* 1f4e_A* 1f4f_A* 1jtq_A* 1jtu_A* 1jut_A* 1kce_A* 1kzi_A* 1tls_A* 1tsn_A* 1f4b_A* 2bbq_A* 2ftq_A* 2a9w_A* 2kce_A* 3b9h_A* 3bhl_A* 3bhr_A* 3tms_A ... Back     alignment and structure
>1tis_A Thymidylate synthase; transferase(methyltransferase); 2.70A {Enterobacteria phage T4} SCOP: d.117.1.1 Back     alignment and structure
>1bkp_A Thymidylate synthase A; methyltransferase, DTMP synthase; 1.70A {Bacillus subtilis} SCOP: d.117.1.1 PDB: 1bko_A 1bsf_A 1bsp_A 1b02_A* Back     alignment and structure
>4dq1_A TS, tsase, thymidylate synthase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: UMP; 2.71A {Staphylococcus aureus} Back     alignment and structure
>3uwl_A TS, tsase, thymidylate synthase; methyltransferase, transferase; HET: CME FOZ; 2.07A {Enterococcus faecalis} PDB: 3ik0_A* 1lcb_A* 1lce_A* 1lca_A* 1thy_A* 1tsl_A* 1tsm_A* 2tdm_A* 3bnz_A* 3byx_A* 3bz0_A* 3c06_A* 3c0a_A* 1nje_A* 3ijz_A* 3ik1_A* 4tms_A 1tsy_A* 1tsz_A 2g86_A* ... Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>3v8h_A TS, tsase, thymidylate synthase; ssgcid, structural genomics, seattle S genomics center for infectious disease, transferase; HET: CIT; 1.65A {Burkholderia thailandensis} Back     alignment and structure
>3ix6_A TS, tsase, thymidylate synthase; niaid, ssgcid, seattle structural center for infectious DISE brucellosis, orchitis, epididymitis, mastitis; 2.20A {Brucella melitensis} Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4} Back     alignment and structure
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A* Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A Back     alignment and structure
>2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A Back     alignment and structure
>3irm_A Bifunctional dihydrofolate reductase-thymidylate; DHFR-TS antifolate complex, methyltransfe multifunctional enzyme, NADP; HET: 1CY; 2.10A {Trypanosoma cruzi} PDB: 3inv_A* 3irn_A* 3iro_A* 2h2q_A* 3cl9_A* 3clb_A* 3hbb_A* 3kjs_A* Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>3hj3_A Chain A, crystal structure of DHFR; TS, enzyme, crossover, non-active site, oxidoreductase; HET: UMP CB3 MTX NDP; 2.70A {Cryptosporidium hominis} PDB: 1qzf_A* 1sej_A* 3dl5_A* 3dl6_A* 2oip_A* Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1b5e_A Protein (deoxycytidylate hydroxymethylase); DNTP synthesizing complex, transferase; HET: DCM; 1.60A {Enterobacteria phage T4} SCOP: d.117.1.1 PDB: 1b49_A* 1b5d_A* Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>3qg2_A Bifunctional dihydrofolate reductase-thymidylate; pyrimethamine, antifolate resistance, oxidoreductase, transferase; HET: CP6 NDP UMP; 2.30A {Plasmodium falciparum} PDB: 3jsu_A* 4dp3_A* 4dph_A* 3qgt_A* 3um8_A* 4dpd_A* 3um5_A* 3um6_A* Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A* Back     alignment and structure
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A* Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens} Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} Back     alignment and structure
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus} Back     alignment and structure
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A* Back     alignment and structure
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 875
d1t3ta2262 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidot 2e-25
d1t3ta2262 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidot 1e-04
d1t3ta168 a.5.10.1 (A:153-220) FGAM synthase PurL, linker do 4e-21
d1t3ta5200 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like 5e-20
d1vqoq195 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeo 1e-17
d1vqoq195 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeo 2e-11
d1vk3a1165 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidi 2e-09
d1b5ea_241 d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophag 6e-09
d1tswa_316 d.117.1.1 (A:) Thymidylate synthase {Lactobacillus 2e-07
d1t3ta7217 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-li 2e-06
d2g8oa1264 d.117.1.1 (A:1-264) Thymidylate synthase {Escheric 2e-05
d1f28a_295 d.117.1.1 (A:) Thymidylate synthase {Pneumocystis 3e-05
d1hvya_288 d.117.1.1 (A:) Thymidylate synthase {Human (Homo s 4e-05
d1seja2289 d.117.1.1 (A:233-521) Bifunctional enzyme dihydrof 1e-04
d1j3kc_326 d.117.1.1 (C:) Bifunctional enzyme dihydrofolate r 0.002
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Length = 262 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: FGAM synthase PurL, amidotransferase domain
species: Salmonella typhimurium [TaxId: 90371]
 Score =  104 bits (260), Expect = 2e-25
 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 1/112 (0%)

Query: 667 GKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFS 726
           G +   +AVLRE+G+N   EM+A     GF+  D+ + DLL  +I L  F  LV  GGFS
Sbjct: 4   GARP-KVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFS 62

Query: 727 YADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWF 778
           Y D LG+ +GWA S+L N  ++ +   F  R  T + GVCNGCQ+M+ L   
Sbjct: 63  YGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLREL 114


>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Length = 262 Back     information, alignment and structure
>d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} Length = 68 Back     information, alignment and structure
>d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 200 Back     information, alignment and structure
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 95 Back     information, alignment and structure
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 95 Back     information, alignment and structure
>d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 165 Back     information, alignment and structure
>d1b5ea_ d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10665]} Length = 241 Back     information, alignment and structure
>d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]} Length = 316 Back     information, alignment and structure
>d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 217 Back     information, alignment and structure
>d2g8oa1 d.117.1.1 (A:1-264) Thymidylate synthase {Escherichia coli [TaxId: 562]} Length = 264 Back     information, alignment and structure
>d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]} Length = 295 Back     information, alignment and structure
>d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure
>d1seja2 d.117.1.1 (A:233-521) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Cryptosporidium hominis [TaxId: 237895]} Length = 289 Back     information, alignment and structure
>d1j3kc_ d.117.1.1 (C:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 326 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query875
d1t3ta5200 FGAM synthase PurL, PurM-like module, N1 and N2 do 100.0
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 100.0
d1vk3a2162 Phosphoribosylformylglycinamidine synthase II, dom 99.94
d1t3ta7217 FGAM synthase PurL, PurM-like module, C1 and C2 do 99.92
d1vqoq195 Ribosomal proteins L21e {Archaeon Haloarcula maris 99.68
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.49
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 99.47
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.44
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 99.43
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.41
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.37
d1vk3a3179 Phosphoribosylformylglycinamidine synthase II, dom 99.35
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.35
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.28
d2ab0a1195 Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] 99.24
d1p5fa_186 DJ-1 {Human (Homo sapiens) [TaxId: 9606]} 99.22
d1t3ta168 FGAM synthase PurL, linker domain {Salmonella typh 99.18
d1sy7a1184 Catalase, C-terminal domain {Neurospora crassa [Ta 99.16
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 99.1
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 99.05
d1p80a1156 Catalase, C-terminal domain {Escherichia coli, HPI 99.02
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 98.98
d2fexa1188 Hypothetical protein Atu0886 {Agrobacterium tumefa 98.95
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 98.9
d1f28a_295 Thymidylate synthase {Pneumocystis carinii [TaxId: 98.78
d1n57a_279 HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} 98.76
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 98.75
d1j3kc_326 Bifunctional enzyme dihydrofolate reductase-thymid 98.72
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 98.69
d1tswa_316 Thymidylate synthase {Lactobacillus casei [TaxId: 98.65
d1hvya_288 Thymidylate synthase {Human (Homo sapiens) [TaxId: 98.61
d1seja2289 Bifunctional enzyme dihydrofolate reductase-thymid 98.61
d1vqoq195 Ribosomal proteins L21e {Archaeon Haloarcula maris 98.58
d2g8oa1264 Thymidylate synthase {Escherichia coli [TaxId: 562 98.58
d1bkpa_278 Thymidylate synthase {Bacillus subtilis [TaxId: 14 98.57
d1vk3a1165 Phosphoribosylformylglycinamidine synthase II, dom 98.55
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 98.52
d1tisa_286 Thymidylate synthase {Bacteriophage T4 [TaxId: 106 98.47
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 98.45
d1vk3a1165 Phosphoribosylformylglycinamidine synthase II, dom 98.43
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 98.36
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 98.29
d1b5ea_241 dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10 98.25
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 98.23
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 98.23
d1t3ta6187 FGAM synthase PurL, PurM-like module, C1 and C2 do 97.89
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 97.67
d2z1ea1113 Hydrogenase expression/formation protein HypE {The 96.99
d2z1ea2179 Hydrogenase expression/formation protein HypE {The 96.83
d2zoda1152 Selenide, water dikinase SelD {Aquifex aeolicus [T 96.62
d3c9ua1137 Thiamine monophosphate kinase (ThiL) N-terminal do 96.04
d1t3ta4209 FGAM synthase PurL, PurM-like module, N1 and N2 do 95.59
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 94.59
d3c9ua2163 Thiamine monophosphate kinase (ThiL) C-terminal do 81.14
d1t0ba_240 GK2113 homologue {Bacillus stearothermophilus [Tax 81.06
>d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: PurM N-terminal domain-like
family: PurM N-terminal domain-like
domain: FGAM synthase PurL, PurM-like module, N1 and N2 domains
species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00  E-value=2.1e-42  Score=352.47  Aligned_cols=174  Identities=27%  Similarity=0.308  Sum_probs=152.9

Q ss_pred             CCCCCCCCcCHHHHHHHHhcCcccccccceeecccccccceeEeccccCCCCCCcCceEEEEEecCCcEEEEEEecCCCc
Q psy5570          63 TTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPI  142 (875)
Q Consensus        63 ~~~~~p~~~dl~~~l~~vL~~pnVaSK~~l~~qyD~~Vgg~tv~~P~vGp~~~p~sDaaV~~~~~~~~~g~ams~G~~p~  142 (875)
                      ++++.+ ..+++++|+++|+|||||||+||+|||||+|||+||++|++||+|.|++|+++++...++.+|+|||+|+||+
T Consensus         8 ~~~~~~-~~~l~~~l~~lL~~pnv~SK~~i~~qyD~~V~g~tv~~p~~G~~~~~~~d~~~~~~~~~~~~g~a~s~g~np~   86 (200)
T d1t3ta5           8 DALNRA-DITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAP   86 (200)
T ss_dssp             CCCCCT-TCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTTCSCEEEEEEEECGG
T ss_pred             CCCCCC-CCCHHHHHHHHHcCCccccchhHHHHcccccccceEEecccCcccccccccccccccCCCceEEEEEcCCCCc
Confidence            344444 4689999999999999999999999999999999999999999999999999999887889999999999999


Q ss_pred             ccccCHHHHHHHHHHHHHhhccccCCcccccceeccccccccccCCcccccccCcc--hhcccccccccchHHhhhhcCC
Q psy5570         143 KGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRSIHIFHYSFSGRFAFKNHG--IYDHLDRSQCLPIRYVDDNNKI  220 (875)
Q Consensus       143 ~~~~dPy~GA~~AV~EAl~Nlva~g~~~l~~i~ls~n~~~~~~~~~~~~w~~g~P~--l~~a~~a~~~~~l~d~~~~lgi  220 (875)
                      ++.+|||+||++||+||+|||+|+|+.+++++.+++|||          |+.++|+  ++++..+  +.++.|+|++|++
T Consensus        87 ~~~~dP~~ga~~aV~Ea~rNl~a~Ga~~~~~i~~~~n~~----------~~~~~~~e~~~~~~~~--~~~~~d~c~~l~i  154 (200)
T d1t3ta5          87 VALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWM----------AAAGHPGEDAGLYDAV--KAVGEELCPQLGL  154 (200)
T ss_dssp             GGGTCHHHHHHHHHHHHHHHHTTSBCCSGGGCEEEEEEE----------CBTTSTTHHHHHHHHH--HHHHTTHHHHHTC
T ss_pred             ceecCHHHHHHHHHHHHHhhheeccccccceeehhhhhh----------hccCCChhhhhHHHHH--HHHHHHHHHHcCC
Confidence            999999999999999999999999998999999999999          8777765  4444333  5566799999999


Q ss_pred             cccCCCCCCCCCCc------cccccccccc-ccccc
Q psy5570         221 TEDYPMNPNGSPGK------RERKKKTGRY-LGKYG  249 (875)
Q Consensus       221 P~i~gkdsm~~~~~------~~~~~~~~~~-~~~~~  249 (875)
                      |+|||||||||++.      .+.+.+|+|+ +++++
T Consensus       155 p~i~GkdSls~~~~~~~~~~~~~v~~PpTlvis~~g  190 (200)
T d1t3ta5         155 TIPVGKDSMSMKTRWQEGNEQREMTSPLSLVISAFA  190 (200)
T ss_dssp             EEEEEEEECBCEEEEESSSSEEEEECCCEEEEEEEE
T ss_pred             CcCCCCCCcceeeecccCCccceecCCCCeEEEEEE
Confidence            99999999999864      2556778887 55554



>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1f28a_ d.117.1.1 (A:) Thymidylate synthase {Pneumocystis carinii [TaxId: 4754]} Back     information, alignment and structure
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1j3kc_ d.117.1.1 (C:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1tswa_ d.117.1.1 (A:) Thymidylate synthase {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1hvya_ d.117.1.1 (A:) Thymidylate synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1seja2 d.117.1.1 (A:233-521) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, TS domain {Cryptosporidium hominis [TaxId: 237895]} Back     information, alignment and structure
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d2g8oa1 d.117.1.1 (A:1-264) Thymidylate synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1bkpa_ d.117.1.1 (A:) Thymidylate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tisa_ d.117.1.1 (A:) Thymidylate synthase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1b5ea_ d.117.1.1 (A:) dCMP hydroxymethylase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1t0ba_ c.23.16.6 (A:) GK2113 homologue {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure