Diaphorina citri psyllid: psy5622


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MSALKSVHCGQDLGFVIRDQWFNSKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLIDKMF
cccHHHHHHHHHcccEEEEcccccccHHHHHHcccEEEEEccccccccccHHHHHHHHHHcccHHHHHccEEEcccccHHHHHHHHHHHccccEEEEccccccHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHccEEEccccccccccccccccHHHccHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHccccEEcccccccccccccccccHHHHHHHHHHccccc
*SALKSVHCGQDLGFVIRDQWFNSKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLIDKMF
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MSALKSVHCGQDLGFVIRDQWFNSKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLIDKMF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
L-threonine dehydratase catabolic TdcB Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.confidentQ5HFY5
Serine racemase Catalyzes the synthesis of D-serine from L-serine. Has dehydratase activity towards both L-serine and D-serine. Displays high substrate specificity for L-serine, whereas L-alanine, L-arginine, and L-glutamine were poor substrates.confidentQ2PGG3
Serine racemase Catalyzes the synthesis of D-serine from L-serine. D-serine is a key coagonist with glutamate at NMDA receptors. Has dehydratase activity towards both L-serine and D-serine.confidentQ76EQ0

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051289 [BP]protein homotetramerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051260, GO:0051262, GO:0065003, GO:0044085, GO:0008150, GO:0016043, GO:0071840
GO:0016594 [MF]glycine bindingprobableGO:0043168, GO:0043169, GO:0031406, GO:0043167, GO:0003674, GO:0005488, GO:0016597
GO:0030170 [MF]pyridoxal phosphate bindingprobableGO:0043168, GO:0003674, GO:0048037, GO:0005488, GO:0043167
GO:0043025 [CC]neuronal cell bodyprobableGO:0005575, GO:0097458, GO:0044297, GO:0005623, GO:0044464
GO:0030378 [MF]serine racemase activityprobableGO:0016854, GO:0016855, GO:0016853, GO:0036361, GO:0047661, GO:0003824, GO:0003674
GO:0003941 [MF]L-serine ammonia-lyase activityprobableGO:0003824, GO:0016829, GO:0016841, GO:0016840, GO:0003674
GO:0046983 [MF]protein dimerization activityprobableGO:0003674, GO:0005488, GO:0005515
GO:0070179 [BP]D-serine biosynthetic processprobableGO:0070178, GO:0046437, GO:0019752, GO:0044249, GO:0006807, GO:0044281, GO:0044283, GO:0009069, GO:1901576, GO:0044710, GO:0044711, GO:0006520, GO:0071704, GO:1901605, GO:1901607, GO:0008652, GO:0009987, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0009070, GO:0044238, GO:1901564, GO:0006082, GO:1901566, GO:0046394, GO:0016053, GO:0044237, GO:0046416
GO:0045177 [CC]apical part of cellprobableGO:0005575, GO:0044464, GO:0005623
GO:0000287 [MF]magnesium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005509 [MF]calcium ion bindingprobableGO:0043169, GO:0046872, GO:0003674, GO:0005488, GO:0043167
GO:0018249 [BP]protein dehydrationprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0006464, GO:0043170, GO:0071704, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0008721 [MF]D-serine ammonia-lyase activityprobableGO:0003824, GO:0016829, GO:0016841, GO:0016840, GO:0003674
GO:0042866 [BP]pyruvate biosynthetic processprobableGO:1901576, GO:0044710, GO:0044711, GO:0006082, GO:0071704, GO:0046394, GO:0044237, GO:0009987, GO:0016053, GO:0019752, GO:0032787, GO:0044249, GO:0009058, GO:0008150, GO:0044281, GO:0008152, GO:0044283, GO:0043436, GO:0006090, GO:0072330
GO:0018114 [MF]threonine racemase activityprobableGO:0016854, GO:0016855, GO:0016853, GO:0036361, GO:0047661, GO:0003824, GO:0003674
GO:0006565 [BP]L-serine catabolic processprobableGO:0019752, GO:0009063, GO:0006807, GO:0044281, GO:0044282, GO:0009069, GO:0044712, GO:1901575, GO:0006563, GO:0006520, GO:0071704, GO:1901605, GO:1901606, GO:0009987, GO:0044710, GO:0008150, GO:0008152, GO:0043436, GO:0009056, GO:0009071, GO:0044248, GO:0044238, GO:1901564, GO:1901565, GO:0006082, GO:0046395, GO:0016054, GO:0044237
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZSJ, chain A
Confidence level:very confident
Coverage over the Query: 13-145,157-268
View the alignment between query and template
View the model in PyMOL
Template: 1PWE, chain A
Confidence level:probable
Coverage over the Query: 6-144,155-254
View the alignment between query and template
View the model in PyMOL