Diaphorina citri psyllid: psy5660

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MEKHPFFMSKFPGEGEEMSPLVEGLQQLKYDPLENTPEELATTYKDEGNFNFKCNKYRNAIINYTEGLKIKCADNDVNAQLYNNRAASNFFLKNYRSCLTDCQIALKLKPDYPKVKLRAAQCLFHLKKFEDCTHLCDELLKENPTDSTVIDLRTSCINKHKEILRNERKQAQQVKKEEKEKERVLQIIRERKIKLATSGKGDLKSFSDLEPNFPEITLRPVHTDDNDRLVWPVLFLYPEYRITDFVQEFHEDVTFDSMLEEMFSESPGWDEDRKYVPGRLSIYYQDPNGKPQRVPTTSTLGEVLTNPKYVIQAGTPGFSILVADSKEEAQFIKDCLS
cccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccccccccccccccccccccccccccccccEEEEEEEEccccccccHHccccccccHHHHHHHHccccccccccccccccccEEEEEcccccEEEccccccHHHHHccccEEEEccccEEEEEEcccHHHHHHHHHHHc
*EKHPFFMSKFP***********GL**L************ATTYKDEGNFNFKCNKYRNAIINYTEGLKIKCADNDVNAQLYNNRAASNFFLKNYRSCLTDCQIALKLKPDYPKVKLRAAQCLFHLKKFEDCTHLCDELLKENPTDSTVIDLRTSCINKH*************************QIIR***********************FPEITLRPVHTDDNDRLVWPVLFLYPEYRITDFVQEFHEDVTFDSMLEEMFSESPGWDEDRKYVPGRLSIYYQDPNGKPQRVPTTSTLGEVLTNPKYVIQAGTPGFSILVADSKEEAQFIKDCLS
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MEKHPFFMSKFPGEGEEMSPLVEGLQQLKYDPLENTPEELATTYKDEGNFNFKCNKYRNAIINYTEGLKIKCADNDVNAQLYNNRAASNFFLKNYRSCLTDCQIALKLKPDYPKVKLRAAQCLFHLKKFEDCTHLCDELLKENPTDSTVIDLRTSCxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKIKLATSGKGDLKSFSDLEPNFPEITLRPVHTDDNDRLVWPVLFLYPEYRITDFVQEFHEDVTFDSMLEEMFSESPGWDEDRKYVPGRLSIYYQDPNGKPQRVPTTSTLGEVLTNPKYVIQAGTPGFSILVADSKEEAQFIKDCLS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Tetratricopeptide repeat protein 4 confidentQ5EA11
Tetratricopeptide repeat protein 4 confidentO95801
Tetratricopeptide repeat protein 4 confidentQ8R3H9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FP2, chain A
Confidence level:very confident
Coverage over the Query: 20-141
View the alignment between query and template
View the model in PyMOL
Template: 3RKV, chain A
Confidence level:confident
Coverage over the Query: 78-176
View the alignment between query and template
View the model in PyMOL