Diaphorina citri psyllid: psy5716


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MTGSCERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQSASESNISPASGQKNRKFASASTSPRKSSATEATLPPSPKSKTWKGRVAKQFRRIQAGAGSPNSPHPPYPPGSNIGVPLQHCVSVNLLCPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDNMVTMVS
ccccccEEEccccEEEEcccccccccEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHHHHHHccccccEEEEccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccccccHHccc
****CERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAI***********************************************************************PPGSNIGVPLQHCVSVNLLCPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDD****MV*
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MTGSCERIDIGHNCVEVACDYTKRKHVLRLSSPSSNTELLLQADDTLTMAHWIRDLQTHAIAQSASESNISPASGQKNRKFASASTSPRKSSATEATLPPSPKSKTWKGRVAKQFRRIQAGAGSPNSPHPPYPPGSNIGVPLQHCVSVNLLCPFLFPRVPGNTAAVSSLTEAVNKGLDASVLEQDPRWSDVNVISSLLKSFFRRLPDSLLTTELYPHFIQADKIEDPATRMATIKKLVHELPEHHFQTLKYILQHLKRVVDNSEVNKMEARNLAIMFGPTLVRAGDDNMVTMVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
GTPase-activating protein pac-1 GTPase-activating protein for members of the Rho subfamily including Rac1, RhoA and cdc42 and other Ras-related subfamilies including let-60. Mediates radial (inner-outer) polarity and gastrulation by excluding par-6 from contacted cell surfaces; acts by inactivating cdc42 at inner cell surfaces which limits active cdc42 to outer cell surfaces devoid of cell-cell contacts, where cdc42 can bind and recruit par-6.confidentP34288

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030675 [MF]Rac GTPase activator activityprobableGO:0005099, GO:0005083, GO:0005096, GO:0030695, GO:0003674, GO:0008047, GO:0005100, GO:0060589, GO:0030234
GO:0071944 [CC]cell peripheryprobableGO:0005575, GO:0044464, GO:0005623
GO:0032855 [BP]positive regulation of Rac GTPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0035023, GO:0046578, GO:0023051, GO:0010646, GO:0043087, GO:0050789, GO:0043085, GO:0032319, GO:0032318, GO:0043547, GO:0051345, GO:0009966, GO:0031323, GO:0030811, GO:0065007, GO:0044093, GO:0065009, GO:0051056, GO:0033121, GO:0033124, GO:0019219, GO:0048583, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0032320, GO:0032321, GO:0031329, GO:0006140
GO:0051683 [BP]establishment of Golgi localizationprobableGO:0044699, GO:0051234, GO:0009987, GO:0044763, GO:0051640, GO:0051649, GO:0008150, GO:0051656, GO:0051179, GO:0051645, GO:0051641
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0007266 [BP]Rho protein signal transductionprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0050789, GO:0065007, GO:0044763, GO:0007165, GO:0023052, GO:0007154, GO:0007265, GO:0007264, GO:0035556, GO:0044699
GO:0030054 [CC]cell junctionprobableGO:0005575
GO:0022603 [BP]regulation of anatomical structure morphogenesisprobableGO:0050793, GO:0008150, GO:0065007, GO:0050789
GO:0006928 [BP]cellular component movementprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699
GO:0015629 [CC]actin cytoskeletonprobableGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0065008 [BP]regulation of biological qualityprobableGO:0008150, GO:0065007

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FK2, chain A
Confidence level:very confident
Coverage over the Query: 133-290
View the alignment between query and template
View the model in PyMOL
Template: 1DRO, chain A
Confidence level:very confident
Coverage over the Query: 5-61
View the alignment between query and template
View the model in PyMOL