Diaphorina citri psyllid: psy5812

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MSELQIIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIRLCIFS
cccccEEcccccccccHHHHccccccccccCCcccccccccccccHHHHHHHHHHccccccccccccccEEEEEEEEEEEcccccccccEEEEEEEEEcEECccccccccccccCECccHcccccccccEEEEcccccCEEEcccccEEEEECcccEEEEEEEEEEEEEEccccccccccccccccEEEEcccccccEEEEEEcccCCcccccccccEEEEEEEEEEEEEECcccCEEEEEEEEEEEEEEcEEEHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccc
*****I**IP*******************************RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR************LGNYIRLCIF*
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MSELQIIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIRLCIFS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Gamma-aminobutyric acid receptor subunit beta-like GABA, an inhibitory neurotransmitter, mediates neuronal inhibition by binding to the GABA receptor and opening an integral chloride channel. Combines with the ligand-gated ion channel subunit GRD to form cation-selective GABA-gated ion channels when coexpressed in Xenopus laevis oocytes.very confidentQ08832
Gamma-aminobutyric acid receptor subunit beta-4 GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.confidentP24045
Gamma-aminobutyric acid receptor subunit beta-3 GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.confidentP28472

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008150 [BP]biological_processconfident
GO:0005886 [CC]plasma membraneconfidentGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0004890 [MF]GABA-A receptor activityprobableGO:0038023, GO:0016917, GO:0060089, GO:0004888, GO:0003674, GO:0004872, GO:0004871
GO:0060077 [CC]inhibitory synapseprobableGO:0005575, GO:0045202
GO:0060119 [BP]inner ear receptor cell developmentprobableGO:0032502, GO:0044707, GO:0030154, GO:0048468, GO:0060113, GO:0007275, GO:0044699, GO:0048869, GO:0048513, GO:0043583, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0048699, GO:0044767, GO:0008150, GO:0048731, GO:0022008, GO:0048839, GO:0007399, GO:0007423, GO:0048856, GO:0042490, GO:0044763
GO:0051932 [BP]synaptic transmission, GABAergicprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0007267, GO:0044763, GO:0023052, GO:0007268, GO:0007270, GO:0007154, GO:0044699, GO:0003008
GO:0009636 [BP]response to toxic substanceprobableGO:0042221, GO:0050896, GO:0008150
GO:0043235 [CC]receptor complexprobableGO:0043234, GO:0005575, GO:0032991
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0043195 [CC]terminal boutonprobableGO:0044306, GO:0043679, GO:0044463, GO:0044464, GO:0005623, GO:0030424, GO:0005575, GO:0097458, GO:0044456, GO:0045202, GO:0043005, GO:0033267, GO:0042995
GO:0007218 [BP]neuropeptide signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0007186, GO:0050789, GO:0044699
GO:0007214 [BP]gamma-aminobutyric acid signaling pathwayprobableGO:0044700, GO:0051716, GO:0008150, GO:0050896, GO:0009987, GO:0050794, GO:0023052, GO:0065007, GO:0044763, GO:0007165, GO:0007166, GO:0007154, GO:0007186, GO:0050789, GO:0044699
GO:0007605 [BP]sensory perception of soundprobableGO:0032501, GO:0044707, GO:0050954, GO:0007600, GO:0008150, GO:0050877, GO:0044699, GO:0003008
GO:0090102 [BP]cochlea developmentprobableGO:0032502, GO:0048839, GO:0032501, GO:0044707, GO:0007423, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0043583, GO:0048731, GO:0007275, GO:0044699
GO:0005635 [CC]nuclear envelopeprobableGO:0005575, GO:0005623, GO:0005634, GO:0044464, GO:0031967, GO:0031975, GO:0044446, GO:0043229, GO:0044428, GO:0012505, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0034220 [BP]ion transmembrane transportprobableGO:0009987, GO:0006811, GO:0006810, GO:0051179, GO:0044765, GO:0044763, GO:0008150, GO:0051234, GO:0055085, GO:0044699
GO:0030425 [CC]dendriteprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0060384 [BP]innervationprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0008150, GO:0048731, GO:0021675, GO:0007275, GO:0044699
GO:0005887 [CC]integral to plasma membraneprobableGO:0031226, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459, GO:0031224
GO:0001505 [BP]regulation of neurotransmitter levelsprobableGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0044763, GO:0008150, GO:0065007, GO:0023052, GO:0007268, GO:0007267, GO:0007154, GO:0065008, GO:0044699, GO:0003008
GO:0008068 [MF]extracellular-glutamate-gated chloride channel activityprobableGO:0003674, GO:0008509, GO:0015276, GO:0015103, GO:0022803, GO:0005253, GO:0005254, GO:0005216, GO:0005215, GO:0005230, GO:0005231, GO:0005234, GO:0022891, GO:0022892, GO:0015108, GO:0015075, GO:0022857, GO:0015267, GO:0022836, GO:0022834, GO:0022839, GO:0022838
GO:0043200 [BP]response to amino acid stimulusprobableGO:1901700, GO:0009719, GO:0050896, GO:0010243, GO:0010033, GO:0008150, GO:0001101, GO:0042221, GO:1901698
GO:0051291 [BP]protein heterooligomerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0006836 [BP]neurotransmitter transportprobableGO:0006810, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0009605 [BP]response to external stimulusprobableGO:0050896, GO:0008150
GO:0042698 [BP]ovulation cycleprobableGO:0044702, GO:0048609, GO:0032504, GO:0022414, GO:0048511, GO:0032501, GO:0008150, GO:0044699, GO:0000003
GO:0009897 [CC]external side of plasma membraneprobableGO:0009986, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0030054 [CC]cell junctionprobableGO:0005575
GO:0032570 [BP]response to progesterone stimulusprobableGO:1901700, GO:0009719, GO:0033993, GO:0050896, GO:1901654, GO:0008150, GO:0048545, GO:0009725, GO:0042221, GO:0010033, GO:0014070
GO:0008144 [MF]drug bindingprobableGO:0003674, GO:0005488
GO:0045211 [CC]postsynaptic membraneprobableGO:0097060, GO:0044456, GO:0016020, GO:0005575, GO:0045202
GO:0050905 [BP]neuromuscular processprobableGO:0032501, GO:0044707, GO:0050877, GO:0008150, GO:0044699, GO:0003008
GO:0016934 [MF]extracellular-glycine-gated chloride channel activityprobableGO:0003674, GO:0016933, GO:0008509, GO:0015276, GO:0015103, GO:0022803, GO:0005253, GO:0005254, GO:0005216, GO:0005215, GO:0005230, GO:0005231, GO:0005237, GO:0022891, GO:0022892, GO:0015108, GO:0015075, GO:0022857, GO:0015267, GO:0022836, GO:0022834, GO:0022839, GO:0022838
GO:0030534 [BP]adult behaviorprobableGO:0032501, GO:0044707, GO:0044708, GO:0050896, GO:0007610, GO:0008150, GO:0044699
GO:0016594 [MF]glycine bindingprobableGO:0043168, GO:0043169, GO:0031406, GO:0043167, GO:0003674, GO:0005488, GO:0016597
GO:0034707 [CC]chloride channel complexprobableGO:0043234, GO:0032991, GO:0016021, GO:0016020, GO:0005575, GO:0034702, GO:0044425, GO:0031224
GO:0030285 [CC]integral to synaptic vesicle membraneprobableGO:0008021, GO:0030135, GO:0043229, GO:0031301, GO:0045202, GO:0043227, GO:0043226, GO:0031224, GO:0030136, GO:0030665, GO:0044446, GO:0031090, GO:0030662, GO:0016023, GO:0031410, GO:0016021, GO:0016020, GO:0031988, GO:0044433, GO:0044456, GO:0005737, GO:0030659, GO:0012505, GO:0012506, GO:0031982, GO:0030672, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422, GO:0031300
GO:0009653 [BP]anatomical structure morphogenesisprobableGO:0032502, GO:0048856, GO:0008150
GO:0051239 [BP]regulation of multicellular organismal processprobableGO:0008150, GO:0065007, GO:0050789
GO:0046982 [MF]protein heterodimerization activityprobableGO:0046983, GO:0003674, GO:0005488, GO:0005515
GO:0021954 [BP]central nervous system neuron developmentprobableGO:0048666, GO:0032502, GO:0048699, GO:0048856, GO:0030182, GO:0007399, GO:0008150, GO:0044707, GO:0048869, GO:0032501, GO:0030154, GO:0048468, GO:0044767, GO:0009987, GO:0044763, GO:0044699, GO:0048731, GO:0022008, GO:0007275, GO:0021953, GO:0007417
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0035612 [MF]AP-2 adaptor complex bindingprobableGO:0032403, GO:0003674, GO:0005488, GO:0005515
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0008503 [MF]benzodiazepine receptor activityprobableGO:0030594, GO:0038023, GO:0060089, GO:0003674, GO:0004872, GO:0004871
GO:0007601 [BP]visual perceptionprobableGO:0032501, GO:0044707, GO:0050877, GO:0007600, GO:0050953, GO:0008150, GO:0044699, GO:0003008
GO:0019904 [MF]protein domain specific bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0042391 [BP]regulation of membrane potentialprobableGO:0019725, GO:0050801, GO:0009987, GO:0006873, GO:0048878, GO:0042592, GO:0065007, GO:0044763, GO:0008150, GO:0055082, GO:0065008, GO:0044699
GO:0030977 [MF]taurine bindingprobableGO:1901681, GO:0003674, GO:0005488
GO:0050811 [MF]GABA receptor bindingprobableGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0032809 [CC]neuronal cell body membraneprobableGO:0044298, GO:0043025, GO:0016020, GO:0044297, GO:0005623, GO:0044464, GO:0005575, GO:0097458, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0032590 [CC]dendrite membraneprobableGO:0016020, GO:0031256, GO:0044463, GO:0031253, GO:0031252, GO:0005623, GO:0044464, GO:0005575, GO:0097458, GO:0032589, GO:0071944, GO:0043005, GO:0005886, GO:0044425, GO:0042995, GO:0044459
GO:0006821 [BP]chloride transportprobableGO:0006811, GO:0006810, GO:0006820, GO:0044765, GO:0008150, GO:0015698, GO:0051234, GO:0051179, GO:0044699
GO:0042734 [CC]presynaptic membraneprobableGO:0097060, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0044456, GO:0045202
GO:0051260 [BP]protein homooligomerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AQ5, chain B
Confidence level:very confident
Coverage over the Query: 43-353
View the alignment between query and template
View the model in PyMOL