Diaphorina citri psyllid: psy5845

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MHWTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE
cccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccCEEccccccccccccEEEEcc
MHWTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE*
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MHWTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Retinal dehydrogenase 1 Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.confidentP00352
Retinal dehydrogenase 1 Is capable of converting 9-cis and all-trans retinal to corresponding retinoic acid with high efficiency, 9-cis retinal being 2-fold more active than all-trans retinal.confidentP51647
Retinal dehydrogenase 1 Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid.confidentP15437

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0009699 [BP]phenylpropanoid biosynthetic processprobableGO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0044550, GO:1901362, GO:0019748, GO:0006725, GO:0044237, GO:0044249, GO:0009058, GO:0008150, GO:0008152, GO:0019438, GO:0009987, GO:0009698, GO:1901360
GO:0004028 [MF]3-chloroallyl aldehyde dehydrogenase activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0001758 [MF]retinal dehydrogenase activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0048565 [BP]digestive tract developmentprobableGO:0032502, GO:0055123, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0031076 [BP]embryonic camera-type eye developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007423, GO:0048568, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0043010, GO:0007275, GO:0044699
GO:0045471 [BP]response to ethanolprobableGO:1901700, GO:0050896, GO:0008150, GO:0042221, GO:0097305, GO:0010033
GO:0008285 [BP]negative regulation of cell proliferationprobableGO:0042127, GO:0050794, GO:0008150, GO:0065007, GO:0048519, GO:0050789, GO:0048523
GO:0070013 [CC]intracellular organelle lumenprobableGO:0005575, GO:0043233, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0043229, GO:0005623, GO:0044424, GO:0043226, GO:0044422
GO:0070403 [MF]NAD+ bindingprobableGO:0043168, GO:0050662, GO:0051287, GO:0000166, GO:0036094, GO:0048037, GO:0005488, GO:0097159, GO:0003674, GO:0043167, GO:1901363, GO:1901265
GO:0008774 [MF]acetaldehyde dehydrogenase (acetylating) activityprobableGO:0003824, GO:0016903, GO:0003674, GO:0016620, GO:0016491
GO:0050269 [MF]coniferyl-aldehyde dehydrogenase activityprobableGO:0004030, GO:0016620, GO:0003824, GO:0016903, GO:0003674, GO:0016491
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0042904 [BP]9-cis-retinoic acid biosynthetic processprobableGO:0019752, GO:0044249, GO:0044281, GO:0044283, GO:0042573, GO:0001523, GO:0042445, GO:0044710, GO:0044711, GO:0072330, GO:0042905, GO:0071704, GO:0065007, GO:0016101, GO:0016102, GO:0065008, GO:0006629, GO:1901576, GO:0006721, GO:0006720, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0010817, GO:0034754, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0002138, GO:0016053, GO:0044237, GO:0008299, GO:0016114
GO:0070887 [BP]cellular response to chemical stimulusprobableGO:0051716, GO:0050896, GO:0009987, GO:0008150, GO:0044763, GO:0042221, GO:0044699
GO:0042493 [BP]response to drugprobableGO:0042221, GO:0050896, GO:0008150
GO:0016331 [BP]morphogenesis of embryonic epitheliumprobableGO:0048598, GO:0002009, GO:0048856, GO:0044707, GO:0060429, GO:0009888, GO:0044767, GO:0009790, GO:0032501, GO:0008150, GO:0048729, GO:0009653, GO:0032502, GO:0007275, GO:0044699
GO:0048048 [BP]embryonic eye morphogenesisprobableGO:0048598, GO:0032502, GO:0009887, GO:0048562, GO:0044707, GO:0007423, GO:0048568, GO:0048592, GO:0048856, GO:0044767, GO:0009790, GO:0048513, GO:0001654, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699, GO:0032501
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0018479 [MF]benzaldehyde dehydrogenase (NAD+) activityprobableGO:0004029, GO:0016620, GO:0003824, GO:0016903, GO:0003674, GO:0016491
GO:0048522 [BP]positive regulation of cellular processprobableGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0001822 [BP]kidney developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0001655, GO:0048731, GO:0072001, GO:0007275, GO:0044699
GO:0055114 [BP]oxidation-reduction processprobableGO:0044710, GO:0008150, GO:0008152
GO:1901565 [BP]organonitrogen compound catabolic processprobableGO:1901575, GO:1901564, GO:0071704, GO:0006807, GO:0008150, GO:0008152, GO:0009056
GO:0034097 [BP]response to cytokine stimulusprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0042574 [BP]retinal metabolic processprobableGO:0044238, GO:0044710, GO:0006081, GO:0006721, GO:0006720, GO:0009987, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0016101, GO:0044255, GO:0001523, GO:0006629
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0030900 [BP]forebrain developmentprobableGO:0032502, GO:0044707, GO:0007420, GO:0007399, GO:0032501, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0051289 [BP]protein homotetramerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0051260, GO:0051262, GO:0065003, GO:0044085, GO:0008150, GO:0016043, GO:0071840
GO:0016918 [MF]retinal bindingprobableGO:0019840, GO:0008289, GO:0019842, GO:0036094, GO:0003674, GO:0005488, GO:0005501
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0048583 [BP]regulation of response to stimulusprobableGO:0008150, GO:0065007, GO:0050789
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0044248 [BP]cellular catabolic processprobableGO:0008150, GO:0009987, GO:0009056, GO:0008152, GO:0044237

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1BXS, chain A
Confidence level:very confident
Coverage over the Query: 3-87
View the alignment between query and template
View the model in PyMOL