Diaphorina citri psyllid: psy5921

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200

MFEDKPTSCNTVDVVGSGSTSSAFSNSLPEANKMEGRAENEHMISSSESYLFTQNKSYDSPTIVAKQTLLPLSGELEKQIISAKSSSTEGSSVVTSYIKLKCKPISRALVVEELINTDVTNILSQEPFYSNFKDITRTEITNKFVHLEAAPVALLEEHRCLFSGLSEWRQRVCLEVTGDATRNVNDIMESFQHIFPKSNFIKPIAKPPTSKSVTRWLERKEAFKRNAGTRSSVSSRVEQKILENEQCSQKGIVDVKCFEESSALERSMKPDDRPSPTRKNKSTRSSFDSDMFPSSSSRESNQSPPNKDSIHEAEITHPDCSKSSQIDFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSRITEVEKRNSSRDEVKNTQLQMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSIKQRAHMRAPESLPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQKLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKSNAALQRVLHARQLGLKLIANVTYGYTAANFSGRMPCVEVGDSVVSKGRETLQKAIETVNNTSKWQCRVVYGDTDSMFVLAPGKTKQEAFEIGKEIANVVTNNNPTPVKLKFEKVYQPCILQTKKRYVGYMYETADQDKPIYEAKGIETVRRDGCPAVSKILKKSLCLLFETKDLSVVKEYVEKQFSKIISGRISVQDMTFAKEYRGQAGYKPGACVPALSLARQWVLTDPRAEPRVSERVPYVIVSGAPGLPLIKLVKSPYELLQDSSLRLNSEYYITRVIIPPLERCFLLLGTPVLPWYKNLPRKLHVYLPSVLNERKKKSTISQYFASVNCVCCNQMTQNNKGVCDACLNQTQLLGTCLYYKIQAWQRSQDQVNKVCTTCVGRSTSNDCISLDCPVLYRKTQITRDLDQLSYVLSLCDSHLALF

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccEEEccccccccccHHHHHHHHHHcccccccccccccccccccccccccccEEEcccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccEEEcccccccccccccccccEEEEEEEEEccccccccccccccEEEEEEEEEcccccccccEEEEEEccccccccccccccEEEECccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHcccccccccccccccccccccccccccEEEEccEEEEEHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccCEECccccHHHccccccccccEEEccccccccccEEEEEcccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHccccCEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHcccEEEEEEECccccccCEECcccEEEcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccHHHHHHHHHHHccccccccccccCEEEEEEccccccccccccccHHHHccccccccHHHHHHccccHHHHHHHHccccccHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc

*********NTV*********************************************************************************VTSYIKLKCKPISRALVVEELINTDVTNILSQEPFYSNFKDITRTEITNKFVHLEAAPVALLEEHRCLFSGLSEWRQRVCLEVTGDATRNVNDIMESFQHIFPKSNFIKPIA*************************************************************************************************************************DFNPDLFKSFIRKQLETPKRRICDSYAIDAMTPDTTGDYQMGLDNLNEVTSHVENYYLTVLAVEIHAISRALLKPDPAYDEVKAIFYYLYTCPPEEDRKVGIILIGQESELPEVRTKPIQMHFVSNEKELFSIFIENVRQWDPDILIGYEIETLSWGYLLERGYVLGLNLNQELSR*******************QMPGRIVINLWRLLRHEVNLQSYTFENIMYHVLHERIPLHSWKLLTCWWEHRTHLYKWMTVEHYLIRVTGIIRLIEQLDFIGRTSEMARLFGIQFYEVLSRGSQFRVESIMLRLSRLNNFVAVSPSI***********LPLILEPESRLYTDPIIVLDFQSLYPSVIIAYNYCFSTCLGRVEHLGVSDSFPFGCIDLNVSIRSLKKLQQKLTISPSGVAFVDKSIRCGILPKMLQEILDTRLMVKQSMKEYKSNAALQRVLHARQLGLKLIANVTYGYTAANFSGRMPCVEVGDSVVSKGRETLQKAIETVNNTSKWQCRVVYGDTDSMFVLAPGKTKQEAFEIGKEIANVVTNNNPTPVKLKFEKVYQPCILQTKKRYVGYMYETADQDKPIYEAKGIETVRRDGCPAVSKILKKSLCLLFETKDLSVVKEYVEKQFSKIISGRISVQDMTFAKEYRGQAGYKPGACVPALSLARQWVLTDPRAEPRVSERVPYVIVSGAPGLPLIKLVKSPYELLQDSSLRLNSEYYITRVIIPPLERCFLLLGTPVLPWYKNLPRKLHVYLPSVLNERKKKSTISQYFASVNCVCCNQMTQNNKGVCDACLNQTQLLGTCLYYKIQAWQRSQDQVNKVCTTCVGRSTSNDCISLDCPVLYRKTQITRDLDQLSYVLSLCDSHLALF

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
DNA polymerase zeta catalytic subunit	Interacts with MAD2L2 to form the error prone DNA polymerase zeta involved in translesion DNA synthesis.	confident	Q61493
DNA polymerase zeta catalytic subunit	Interacts with MAD2L2 to form the error prone DNA polymerase zeta involved in translesion DNA synthesis.	confident	O60673

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0006281 [BP]	DNA repair	probable	GO:0090304, GO:0034641, GO:0006807, GO:0044699, GO:0006139, GO:0051716, GO:0044260, GO:0071704, GO:1901360, GO:0009987, GO:0006725, GO:0006974, GO:0006950, GO:0044763, GO:0008152, GO:0046483, GO:0044238, GO:0050896, GO:0044237, GO:0043170, GO:0033554, GO:0006259, GO:0008150
GO:0008408 [MF]	3'-5' exonuclease activity	probable	GO:0016787, GO:0004518, GO:0004527, GO:0016788, GO:0003824, GO:0003674
GO:0016035 [CC]	zeta DNA polymerase complex	probable	GO:0043234, GO:0005575, GO:0032991, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0043229, GO:0044424, GO:0005622, GO:0042575, GO:0044422

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2GV9, chain A
Confidence level:very confident
Coverage over the Query: 327-647
View the alignment between query and template
View the model in PyMOL

Template: 3QEX, chain A
Confidence level:very confident
Coverage over the Query: 381-1072
View the alignment between query and template
View the model in PyMOL

Template: 3FLO, chain B
Confidence level:probable
Coverage over the Query: 1104-1198
View the alignment between query and template
View the model in PyMOL

Template: 3ABD, chain X
Confidence level:probable
Coverage over the Query: 94-114
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
2pff, chain A		probable	Alignment \| Template Structure