Diaphorina citri psyllid: psy5944


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV
ccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccEEEEcccccccCEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEECccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccccEEEcccccccccccccEEEcHHHHHHHHHHHHHHHccccccccccccccccc
*******GVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHT******************************LYTGKGEEKEEEEE*************EEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRS****F**RFVID**
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MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
39S ribosomal protein L4, mitochondrial confidentQ32PI6
39S ribosomal protein L4, mitochondrial confidentQ9BYD3
39S ribosomal protein L4, mitochondrial confidentQ9DCU6

Prediction of Gene Ontology Terms ?

No confident GO terms associated with the query are predicted

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FTC, chain D
Confidence level:very confident
Coverage over the Query: 89-145,171-286
View the alignment between query and template
View the model in PyMOL
Template: 1DMG, chain A
Confidence level:very confident
Coverage over the Query: 58-97,177-289
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3cx5, chain Fprobable Alignment | Template Structure