Psyllid ID: psy5944

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV
ccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccEEEEcccccccEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccccEEEcccccccccccccEEEcHHHHHHHHHHHHHHHccccccccccccccccc
ccEcccccccccHccccccccEEEEHEEccccccccccccccccccccccccccHHHHHEccccccccEEEEEEcHHHccccccHHHHHHHHHHHHHHHccccccccccccEcccccccccccccccccccccccccEccccEEcccccccccHHHHHHHHcccHHHHHHEEccccccHccccHHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHcccccEEEEEEcccHcHHHHHHHHHcccccEEEEcccHHHHHccccEEEcHHHHHHHHHHHHcccccccHHHccccEEEccc
mtisntsgvfpfretfgfrrpaildflwfndftsnkSEILHETKEFQNAFLQPRQAWVENLDtteekhfgfvnlhpdifglvprldvITMNIEWQKKYKwvrfdhtkvtnevertgrkpwpqkglierldgkrrprlytgkgeekeeeeeeeeeeeeeeeeeEEEEEEITAtlnpcglcrilPVMVHIVVGLTSTLSIKLMQDDLhivkdlvlpvddpkylenlveercwgpsvlfvdntdymerNISIVTDQIkhynimpaygennmlkhDTLVITVDALKQIEDKLLLALNrsdnerftsrFVIDTV
mtisntsgvfpfretfgfrRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEwqkkykwvrfdhtkvtnevertgrkpwpqkglierldgkrrprlytgkgeekeeeeeeeeeeeeeeeeeeeeeeEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENlveercwgpsvlfvdntdYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLalnrsdnerftsrfvidtv
MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGeekeeeeeeeeeeeeeeeeeeeeeeeITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV
*******GVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLH***********VITMNIEWQKKYKWVRFDHTKVTNEV***********************************************************TLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRS****F***F*****
********VFPFRETFGFRRPAILDFLWF**************KEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHT******************************LYTGKGEEKEEEEEE************EEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNR********RFVID**
MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTG*******************************TLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV
******SGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKW**********************************PRLYTGKGEEKEEEEE**********EEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVI***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTISNTSGVFPFRETFGFRRPAILDFLWFNDFTSNKSEILHETKEFQNAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGENNMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVIDTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query309 2.2.26 [Sep-21-2011]
Q9DCU6294 39S ribosomal protein L4, yes N/A 0.686 0.721 0.381 3e-39
Q9BYD3311 39S ribosomal protein L4, yes N/A 0.686 0.681 0.390 6e-39
Q32PI6294 39S ribosomal protein L4, yes N/A 0.686 0.721 0.385 6e-37
Q503X2302 39S ribosomal protein L4, yes N/A 0.695 0.711 0.374 1e-34
Q2N9B2207 50S ribosomal protein L4 yes N/A 0.631 0.942 0.269 4e-11
Q1MIE0206 50S ribosomal protein L4 yes N/A 0.647 0.970 0.251 1e-09
Q2K9L5206 50S ribosomal protein L4 yes N/A 0.647 0.970 0.251 1e-09
B5ZYT6206 50S ribosomal protein L4 yes N/A 0.647 0.970 0.251 2e-09
B3PWS2206 50S ribosomal protein L4 yes N/A 0.647 0.970 0.251 3e-09
Q28UW1206 50S ribosomal protein L4 yes N/A 0.631 0.946 0.234 3e-09
>sp|Q9DCU6|RM04_MOUSE 39S ribosomal protein L4, mitochondrial OS=Mus musculus GN=Mrpl4 PE=2 SV=1 Back     alignment and function desciption
 Score =  162 bits (410), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 126/241 (52%), Gaps = 29/241 (12%)

Query: 52  QPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNE 111
           +P QAWVE+L   E++  G   LHPD+F   PRLD++     WQ+ ++ + + +TK   E
Sbjct: 60  RPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAE 119

Query: 112 VERTGRKPWPQKGLIERLDGKRRPRLYTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITA 171
           V   GRKPW QKG      G  R  L+ G G                             
Sbjct: 120 VSGGGRKPWQQKGSGRARHGSIRSPLWRGGGVAHGPR----------------------- 156

Query: 172 TLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWG 231
              P     +LP+ V   +GL   L++KLMQDDLHIV  L LP  DP+YL  L + R WG
Sbjct: 157 --GPTSYYYMLPMKVR-ALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRHWG 213

Query: 232 PSVLFVDNT-DYMERNISIVTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIEDKL 288
            SVL VD T + M +N+   T  +  +N++PA G N  +MLKH TLV+T+ ++  +EDKL
Sbjct: 214 SSVLLVDLTHEEMPKNVVAATSGLNSFNLIPAVGLNVYSMLKHQTLVLTLPSVAFLEDKL 273

Query: 289 L 289
           L
Sbjct: 274 L 274

Mus musculus (taxid: 10090)
>sp|Q9BYD3|RM04_HUMAN 39S ribosomal protein L4, mitochondrial OS=Homo sapiens GN=MRPL4 PE=1 SV=1 Back     alignment and function description
>sp|Q32PI6|RM04_BOVIN 39S ribosomal protein L4, mitochondrial OS=Bos taurus GN=MRPL4 PE=1 SV=1 Back     alignment and function description
>sp|Q503X2|RM04_DANRE 39S ribosomal protein L4, mitochondrial OS=Danio rerio GN=mrpl4 PE=2 SV=1 Back     alignment and function description
>sp|Q2N9B2|RL4_ERYLH 50S ribosomal protein L4 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplD PE=3 SV=1 Back     alignment and function description
>sp|Q1MIE0|RL4_RHIL3 50S ribosomal protein L4 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rplD PE=3 SV=1 Back     alignment and function description
>sp|Q2K9L5|RL4_RHIEC 50S ribosomal protein L4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplD PE=3 SV=1 Back     alignment and function description
>sp|B5ZYT6|RL4_RHILW 50S ribosomal protein L4 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rplD PE=3 SV=1 Back     alignment and function description
>sp|B3PWS2|RL4_RHIE6 50S ribosomal protein L4 OS=Rhizobium etli (strain CIAT 652) GN=rplD PE=3 SV=1 Back     alignment and function description
>sp|Q28UW1|RL4_JANSC 50S ribosomal protein L4 OS=Jannaschia sp. (strain CCS1) GN=rplD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
157108533279 50S ribosomal protein L4 [Aedes aegypti] 0.757 0.838 0.461 2e-59
307170893285 39S ribosomal protein L4, mitochondrial 0.757 0.821 0.450 2e-57
332018616286 39S ribosomal protein L4, mitochondrial 0.757 0.818 0.450 4e-57
322796484287 hypothetical protein SINV_11616 [Solenop 0.760 0.818 0.450 1e-56
307214236285 39S ribosomal protein L4, mitochondrial 0.741 0.803 0.463 2e-56
91094379274 PREDICTED: similar to mitochondrial 39S 0.809 0.912 0.435 4e-56
380011885280 PREDICTED: 39S ribosomal protein L4, mit 0.760 0.839 0.458 4e-56
170032333278 mitochondrial 39S ribosomal protein L4 [ 0.741 0.823 0.451 1e-55
328720672282 PREDICTED: 39S ribosomal protein L4, mit 0.757 0.829 0.435 2e-55
350403280280 PREDICTED: 39S ribosomal protein L4, mit 0.776 0.857 0.453 2e-55
>gi|157108533|ref|XP_001650271.1| 50S ribosomal protein L4 [Aedes aegypti] gi|108884031|gb|EAT48256.1| AAEL000701-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/262 (46%), Positives = 156/262 (59%), Gaps = 28/262 (10%)

Query: 48  NAFLQPRQAWVENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTK 107
           N F  PR  W+ENLDT EE+  G   L  ++FG  PR+D++  NIEWQ+KY++V F H+K
Sbjct: 43  NPFRAPRSVWIENLDTIEEQKLGIQQLSSEVFGAAPRIDIVHQNIEWQRKYRFVSFSHSK 102

Query: 108 VTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGEEKEEEEEEEEEEEEEEEEEEEEEE 167
             NEV   GRKPWPQKGL     G  R  L+ G G                         
Sbjct: 103 TRNEVRGGGRKPWPQKGLGRARHGSIRSPLWRGGGIAHGPR------------------- 143

Query: 168 EITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEE 227
                 +P     +LP     V+GL STLSIKL QDDLHIV+DL +P +DP+YL +LV+E
Sbjct: 144 ------SPTTHFYMLPFFSR-VLGLVSTLSIKLAQDDLHIVRDLDIPTEDPQYLRDLVQE 196

Query: 228 RCWGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIE 285
           R WGPSVLF+D++D M RNIS   D+I H N+MP YG N  +MLKHDTLV+T  A ++IE
Sbjct: 197 RAWGPSVLFIDSSDIMPRNISAGADEIDHINLMPVYGLNVYSMLKHDTLVLTKSAAEEIE 256

Query: 286 DKLLLALNRSDNERFTSRFVID 307
            KL   L+R+D     ++F +D
Sbjct: 257 SKLSEHLHRTDARSLMTKFKVD 278

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307170893|gb|EFN63004.1| 39S ribosomal protein L4, mitochondrial [Camponotus floridanus] Back     alignment and taxonomy information
>gi|332018616|gb|EGI59197.1| 39S ribosomal protein L4, mitochondrial [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|322796484|gb|EFZ18991.1| hypothetical protein SINV_11616 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307214236|gb|EFN89342.1| 39S ribosomal protein L4, mitochondrial [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|91094379|ref|XP_970941.1| PREDICTED: similar to mitochondrial 39S ribosomal protein L4 [Tribolium castaneum] gi|270014913|gb|EFA11361.1| hypothetical protein TcasGA2_TC011518 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|380011885|ref|XP_003690024.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Apis florea] Back     alignment and taxonomy information
>gi|170032333|ref|XP_001844036.1| mitochondrial 39S ribosomal protein L4 [Culex quinquefasciatus] gi|167872322|gb|EDS35705.1| mitochondrial 39S ribosomal protein L4 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|328720672|ref|XP_001945994.2| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|350403280|ref|XP_003486754.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query309
FB|FBgn0001995296 mRpL4 "mitochondrial ribosomal 0.391 0.408 0.487 3.7e-50
RGD|1311777294 Mrpl4 "mitochondrial ribosomal 0.368 0.387 0.466 2.2e-40
UNIPROTKB|K7ES61300 MRPL4 "39S ribosomal protein L 0.368 0.38 0.457 2.8e-40
UNIPROTKB|Q9BYD3311 MRPL4 "39S ribosomal protein L 0.368 0.366 0.457 2.8e-40
MGI|MGI:2137210294 Mrpl4 "mitochondrial ribosomal 0.368 0.387 0.466 4.6e-40
UNIPROTKB|F1PB94294 MRPL4 "Uncharacterized protein 0.368 0.387 0.474 1.5e-39
UNIPROTKB|Q32PI6294 MRPL4 "39S ribosomal protein L 0.368 0.387 0.466 3.2e-39
UNIPROTKB|F1S3J8294 MRPL4 "Uncharacterized protein 0.368 0.387 0.457 2.8e-38
ZFIN|ZDB-GENE-050522-388302 zgmrpl4 "mitochondrial ribosom 0.368 0.377 0.470 2.4e-37
WB|WBGene00020717299 mrpl-4 [Caenorhabditis elegans 0.249 0.257 0.467 5.1e-34
FB|FBgn0001995 mRpL4 "mitochondrial ribosomal protein L4" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 300 (110.7 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 60/123 (48%), Positives = 84/123 (68%)

Query:   189 VVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNIS 248
             V+GLTSTLS+KL QDDLHI+ ++ +P  D ++L++L+ ER WGPSVL VD       NI 
Sbjct:   174 VLGLTSTLSVKLAQDDLHIIDNVDIPTGDAEFLKDLIAERNWGPSVLIVDEDHMFPANIC 233

Query:   249 IVTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIEDKLLLALNRSDNERFTSRFVI 306
               +D + + N+MP +G N  +MLKHDTLV+TV A+K +E +LL  LNR+D      +F +
Sbjct:   234 QASDDLGYVNLMPTFGLNVYSMLKHDTLVLTVAAVKHLEQRLLYQLNRNDAASKGGKFKL 293

Query:   307 DTV 309
             D V
Sbjct:   294 DQV 296
GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISS
GO:0003735 "structural constituent of ribosome" evidence=ISS
GO:0006412 "translation" evidence=ISS
RGD|1311777 Mrpl4 "mitochondrial ribosomal protein L4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|K7ES61 MRPL4 "39S ribosomal protein L4, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BYD3 MRPL4 "39S ribosomal protein L4, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2137210 Mrpl4 "mitochondrial ribosomal protein L4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PB94 MRPL4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q32PI6 MRPL4 "39S ribosomal protein L4, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3J8 MRPL4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050522-388 zgmrpl4 "mitochondrial ribosomal protein L4" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00020717 mrpl-4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q32PI6RM04_BOVINNo assigned EC number0.38580.68600.7210yesN/A
Q503X2RM04_DANRENo assigned EC number0.37440.69570.7119yesN/A
Q9BYD3RM04_HUMANNo assigned EC number0.39000.68600.6816yesN/A
Q9DCU6RM04_MOUSENo assigned EC number0.38170.68600.7210yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
pfam00573190 pfam00573, Ribosomal_L4, Ribosomal protein L4/L1 f 4e-10
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 4e-09
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 2e-08
TIGR03953188 TIGR03953, rplD_bact, 50S ribosomal protein L4, ba 5e-08
pfam00573190 pfam00573, Ribosomal_L4, Ribosomal protein L4/L1 f 2e-07
PRK05319205 PRK05319, rplD, 50S ribosomal protein L4; Provisio 7e-07
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 9e-07
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 2e-06
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 3e-06
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 6e-06
pfam02459548 pfam02459, Adeno_terminal, Adenoviral DNA terminal 6e-06
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 1e-05
cd05832106 cd05832, Ribosomal_L12p, Ribosomal protein L12p 1e-05
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 2e-05
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 2e-05
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 2e-05
pfam04712481 pfam04712, Radial_spoke, Radial spokehead-like pro 2e-05
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 3e-05
COG2058109 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP 3e-05
pfam03066146 pfam03066, Nucleoplasmin, Nucleoplasmin 3e-05
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 4e-05
TIGR03953188 TIGR03953, rplD_bact, 50S ribosomal protein L4, ba 5e-05
PRK05319205 PRK05319, rplD, 50S ribosomal protein L4; Provisio 5e-05
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 5e-05
pfam04712481 pfam04712, Radial_spoke, Radial spokehead-like pro 6e-05
COG2058109 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP 6e-05
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 8e-05
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 8e-05
cd05832106 cd05832, Ribosomal_L12p, Ribosomal protein L12p 8e-05
PRK04019330 PRK04019, rplP0, acidic ribosomal protein P0; Vali 9e-05
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 1e-04
pfam04712481 pfam04712, Radial_spoke, Radial spokehead-like pro 1e-04
pfam03985431 pfam03985, Paf1, Paf1 1e-04
pfam05432291 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) 1e-04
TIGR03685105 TIGR03685, L12P_arch, 50S ribosomal protein L12P 2e-04
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 3e-04
cd05832106 cd05832, Ribosomal_L12p, Ribosomal protein L12p 3e-04
COG2058109 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP 3e-04
PRK04019330 PRK04019, rplP0, acidic ribosomal protein P0; Vali 3e-04
pfam03344 715 pfam03344, Daxx, Daxx Family 3e-04
pfam0042888 pfam00428, Ribosomal_60s, 60s Acidic ribosomal pro 3e-04
pfam0042888 pfam00428, Ribosomal_60s, 60s Acidic ribosomal pro 3e-04
pfam0042888 pfam00428, Ribosomal_60s, 60s Acidic ribosomal pro 4e-04
pfam0042888 pfam00428, Ribosomal_60s, 60s Acidic ribosomal pro 4e-04
pfam01056329 pfam01056, Myc_N, Myc amino-terminal region 4e-04
PTZ00415 2849 PTZ00415, PTZ00415, transmission-blocking target a 4e-04
pfam02459548 pfam02459, Adeno_terminal, Adenoviral DNA terminal 5e-04
COG2058109 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP 5e-04
COG2058109 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP 6e-04
pfam05432291 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) 6e-04
pfam0042888 pfam00428, Ribosomal_60s, 60s Acidic ribosomal pro 6e-04
PRK04019330 PRK04019, rplP0, acidic ribosomal protein P0; Vali 7e-04
PTZ00415 2849 PTZ00415, PTZ00415, transmission-blocking target a 7e-04
PTZ00415 2849 PTZ00415, PTZ00415, transmission-blocking target a 8e-04
pfam05432291 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) 0.001
pfam03344 715 pfam03344, Daxx, Daxx Family 0.001
pfam03344715 pfam03344, Daxx, Daxx Family 0.001
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 0.001
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 0.001
pfam11081172 pfam11081, DUF2890, Protein of unknown function (D 0.001
PRK06402106 PRK06402, rpl12p, 50S ribosomal protein L12P; Revi 0.002
PRK04019330 PRK04019, rplP0, acidic ribosomal protein P0; Vali 0.002
COG1614470 COG1614, CdhC, CO dehydrogenase/acetyl-CoA synthas 0.002
pfam03247106 pfam03247, Prothymosin, Prothymosin/parathymosin f 0.002
cd05832106 cd05832, Ribosomal_L12p, Ribosomal protein L12p 0.003
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 0.003
COG1614470 COG1614, CdhC, CO dehydrogenase/acetyl-CoA synthas 0.003
pfam11861154 pfam11861, DUF3381, Domain of unknown function (DU 0.003
PTZ00415 2849 PTZ00415, PTZ00415, transmission-blocking target a 0.004
pfam11705221 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polym 0.004
>gnl|CDD|215999 pfam00573, Ribosomal_L4, Ribosomal protein L4/L1 family Back     alignment and domain information 
 Score = 57.9 bits (141), Expect = 4e-10
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 191 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEE-RCWGPSVLFVDNTDYMERNISI 249
            L S LS K  +  L +V D  L +   K    L++        VL V +    + N+ +
Sbjct: 93  ALRSALSAKAREGKLVVVDDFELEIPKTKDAVKLLKNLGLKNKKVLIVVDEK--DENLYL 150

Query: 250 VTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIEDK 287
               +   +++   G N  ++L  D +VIT  AL+++E++
Sbjct: 151 SARNLPGVDVVTVDGLNVYDLLPADKVVITKSALEKLEER 190

This family includes Ribosomal L4/L1 from eukaryotes and archaebacteria and L4 from eubacteria. L4 from yeast has been shown to bind rRNA. Length = 190
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|234414 TIGR03953, rplD_bact, 50S ribosomal protein L4, bacterial/organelle Back     alignment and domain information
>gnl|CDD|215999 pfam00573, Ribosomal_L4, Ribosomal protein L4/L1 family Back     alignment and domain information
>gnl|CDD|235404 PRK05319, rplD, 50S ribosomal protein L4; Provisional Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|217049 pfam02459, Adeno_terminal, Adenoviral DNA terminal protein Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|100110 cd05832, Ribosomal_L12p, Ribosomal protein L12p Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|218223 pfam04712, Radial_spoke, Radial spokehead-like protein Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|224969 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|145949 pfam03066, Nucleoplasmin, Nucleoplasmin Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|234414 TIGR03953, rplD_bact, 50S ribosomal protein L4, bacterial/organelle Back     alignment and domain information
>gnl|CDD|235404 PRK05319, rplD, 50S ribosomal protein L4; Provisional Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|218223 pfam04712, Radial_spoke, Radial spokehead-like protein Back     alignment and domain information
>gnl|CDD|224969 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|100110 cd05832, Ribosomal_L12p, Ribosomal protein L12p Back     alignment and domain information
>gnl|CDD|179712 PRK04019, rplP0, acidic ribosomal protein P0; Validated Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|218223 pfam04712, Radial_spoke, Radial spokehead-like protein Back     alignment and domain information
>gnl|CDD|217829 pfam03985, Paf1, Paf1 Back     alignment and domain information
>gnl|CDD|114172 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) Back     alignment and domain information
>gnl|CDD|234311 TIGR03685, L12P_arch, 50S ribosomal protein L12P Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|100110 cd05832, Ribosomal_L12p, Ribosomal protein L12p Back     alignment and domain information
>gnl|CDD|224969 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|179712 PRK04019, rplP0, acidic ribosomal protein P0; Validated Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|215914 pfam00428, Ribosomal_60s, 60s Acidic ribosomal protein Back     alignment and domain information
>gnl|CDD|215914 pfam00428, Ribosomal_60s, 60s Acidic ribosomal protein Back     alignment and domain information
>gnl|CDD|215914 pfam00428, Ribosomal_60s, 60s Acidic ribosomal protein Back     alignment and domain information
>gnl|CDD|215914 pfam00428, Ribosomal_60s, 60s Acidic ribosomal protein Back     alignment and domain information
>gnl|CDD|216269 pfam01056, Myc_N, Myc amino-terminal region Back     alignment and domain information
>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional Back     alignment and domain information
>gnl|CDD|217049 pfam02459, Adeno_terminal, Adenoviral DNA terminal protein Back     alignment and domain information
>gnl|CDD|224969 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|224969 COG2058, RPP1A, Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|114172 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) Back     alignment and domain information
>gnl|CDD|215914 pfam00428, Ribosomal_60s, 60s Acidic ribosomal protein Back     alignment and domain information
>gnl|CDD|179712 PRK04019, rplP0, acidic ribosomal protein P0; Validated Back     alignment and domain information
>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional Back     alignment and domain information
>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional Back     alignment and domain information
>gnl|CDD|114172 pfam05432, BSP_II, Bone sialoprotein II (BSP-II) Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|217503 pfam03344, Daxx, Daxx Family Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information
>gnl|CDD|220972 pfam11081, DUF2890, Protein of unknown function (DUF2890) Back     alignment and domain information
>gnl|CDD|235795 PRK06402, rpl12p, 50S ribosomal protein L12P; Reviewed Back     alignment and domain information
>gnl|CDD|179712 PRK04019, rplP0, acidic ribosomal protein P0; Validated Back     alignment and domain information
>gnl|CDD|224530 COG1614, CdhC, CO dehydrogenase/acetyl-CoA synthase beta subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|217450 pfam03247, Prothymosin, Prothymosin/parathymosin family Back     alignment and domain information
>gnl|CDD|100110 cd05832, Ribosomal_L12p, Ribosomal protein L12p Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information
>gnl|CDD|224530 COG1614, CdhC, CO dehydrogenase/acetyl-CoA synthase beta subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|221275 pfam11861, DUF3381, Domain of unknown function (DUF3381) Back     alignment and domain information
>gnl|CDD|185603 PTZ00415, PTZ00415, transmission-blocking target antigen s230; Provisional Back     alignment and domain information
>gnl|CDD|221175 pfam11705, RNA_pol_3_Rpc31, DNA-directed RNA polymerase III subunit Rpc31 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 309
CHL00147215 rpl4 ribosomal protein L4; Validated 100.0
PRK05319205 rplD 50S ribosomal protein L4; Provisional 100.0
KOG1624|consensus290 100.0
PF00573192 Ribosomal_L4: Ribosomal protein L4/L1 family; Inte 100.0
PRK14907295 rplD 50S ribosomal protein L4; Provisional 100.0
PRK14547298 rplD 50S ribosomal protein L4; Provisional 100.0
COG0088214 RplD Ribosomal protein L4 [Translation, ribosomal 100.0
PRK04042254 rpl4lp 50S ribosomal protein L4P; Provisional 100.0
TIGR03672251 rpl4p_arch 50S ribosomal protein L4P. One of the p 100.0
PLN00185 405 60S ribosomal protein L4-1; Provisional 100.0
PTZ00428381 60S ribosomal protein L4; Provisional 100.0
KOG1475|consensus363 99.9
PTZ00428 381 60S ribosomal protein L4; Provisional 94.71
TIGR009271096 2A1904 K+-dependent Na+/Ca+ exchanger. 84.3
PTZ00415 2849 transmission-blocking target antigen s230; Provisi 83.48
>CHL00147 rpl4 ribosomal protein L4; Validated Back     alignment and domain information 
Probab=100.00  E-value=6.7e-65  Score=461.99  Aligned_cols=200  Identities=22%  Similarity=0.265  Sum_probs=189.2

Q ss_pred             eeeccCCCCce-eeeEEcCCcccCCCCchhHHHHHHHHHHHhCCCCcCCCceeeeecccCCCCccCCCCcccccCCCCCc
Q psy5944          58 VENLDTTEEKH-FGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPR  136 (309)
Q Consensus        58 v~~v~~~~g~~-~g~v~L~p~iF~~~~r~dlIh~~V~~q~a~~Rqgta~tKtraEV~GsGRKpwrQKGTGrAR~Gs~rsP  136 (309)
                      ..++++++|+. .|+++|++++| ..++.|+||++|+||++++|||||+||+|+||+||||||||||||||||+||+|||
T Consensus         8 ~~~v~~~~g~~~~~~~~l~~~vf-~~~~~~ll~~~v~~~~a~~R~gt~~tKtR~eV~G~grKp~~QKGTGrAR~Gs~rsP   86 (215)
T CHL00147          8 NYPVIDLTGKEKSETIKLKLNVL-EKSGNYLLHRALVRQNNNQRQGTASTKTRSEVRGGGRKPWKQKGTGRARAGSNRSP   86 (215)
T ss_pred             eEEEEccCCCeecceEEeCHHHh-CCchHhHHHHHHHHHHHHHhhcccccCccccccCCCCCCcccCCCCccCCCCCcCC
Confidence            36788899999 89999999999 55779999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCcccchhhhHHHHHHHHHHHHHHHHHHhhhcCCCccccccCCcccHHHHHHHHHHHhhhcCCCeEEEeccC--CC
Q psy5944         137 LYTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLV--LP  214 (309)
Q Consensus       137 ~~rGGG~af~~~~~~~~~~~~~~~~~~~~~~~~~gP~~Pr~~~~klnkKvr~~lAl~saLS~K~~~~~L~VVd~l~--l~  214 (309)
                      +|||||++|                         ||+ ||+|+++||+|+| ++||+||||.|.  ++|+|||++.  ++
T Consensus        87 ~~rgGG~af-------------------------gP~-pR~y~~klnKKvr-rlAl~sALS~k~--~~l~VVd~~~~~~~  137 (215)
T CHL00147         87 LWKGGGVIF-------------------------GPK-PKTYSNKLNKKER-RLALRTLLYNKS--NNITVVENFESSIT  137 (215)
T ss_pred             cccCCEeec-------------------------CCC-CcchhhhcCHHHH-HHHHHHHHHHhh--CCeEEEcccccccC
Confidence            999999999                         999 8999999999999 999999999985  5899999999  99


Q ss_pred             CCCHHHHHHHHHHcCCC--CceEEEecCCccchhHHHHHhCCCCceEecccchh--hhcCCCcEEEcHHHHHHHHHHHh
Q psy5944         215 VDDPKYLENLVEERCWG--PSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIEDKLL  289 (309)
Q Consensus       215 ~~kTk~l~~ll~~~~~~--~svL~V~~~d~~~~nl~~s~rNI~~v~i~~~~~lN--dlLk~d~lViT~~Al~~Le~~l~  289 (309)
                      .+|||.+.++|+.+++.  +++|||++.  .++|+.+|+||||+|++++++++|  |||++++||||++||++|+++|.
T Consensus       138 ~~KTK~~~~~L~~l~~~~~~~~L~V~~~--~~~nl~~S~rNlp~V~v~~~~~lNv~dLL~~~~vvit~~Al~~lee~~~  214 (215)
T CHL00147        138 NPKTKAFINLLKKLNINLDQKILIIVPE--KTENLYLSTRNLKNVELISADTLNIKSLLKAKQIIITKEALKIIEEVYN  214 (215)
T ss_pred             CCCHHHHHHHHHHcCCCcCCceEEEECC--CchHHHHHHhCCCCcEEEecCCccHHHHhcCCcEEEEHHHHHHHHHHhc
Confidence            99999999999999873  579999854  368999999999999999999999  99999999999999999999974

>PRK05319 rplD 50S ribosomal protein L4; Provisional Back     alignment and domain information
>KOG1624|consensus Back     alignment and domain information
>PF00573 Ribosomal_L4: Ribosomal protein L4/L1 family; InterPro: IPR002136 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>PRK14907 rplD 50S ribosomal protein L4; Provisional Back     alignment and domain information
>PRK14547 rplD 50S ribosomal protein L4; Provisional Back     alignment and domain information
>COG0088 RplD Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04042 rpl4lp 50S ribosomal protein L4P; Provisional Back     alignment and domain information
>TIGR03672 rpl4p_arch 50S ribosomal protein L4P Back     alignment and domain information
>PLN00185 60S ribosomal protein L4-1; Provisional Back     alignment and domain information
>PTZ00428 60S ribosomal protein L4; Provisional Back     alignment and domain information
>KOG1475|consensus Back     alignment and domain information
>PTZ00428 60S ribosomal protein L4; Provisional Back     alignment and domain information
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>PTZ00415 transmission-blocking target antigen s230; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query309
2ftc_D175 Structural Model For The Large Subunit Of The Mamma 3e-26
>pdb|2FTC|D Chain D, Structural Model For The Large Subunit Of The Mammalian Mitochondrial Ribosome Length = 175 Back     alignment and structure 
Iteration: 1

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 97/196 (49%), Gaps = 29/196 (14%)
Query: 94  WQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGXXXXXXXXXXX 153
           WQK +K + +  TK   EV   GRKPWPQKG      G  R  L+ G G           
Sbjct: 6   WQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAH-------- 57
Query: 154 XXXXXXXXXXXXXXXITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVL 213
                                P     +LP+ V   +GL   L++KL QDDLHI+  L L
Sbjct: 58  -----------------GPRGPTSYYYMLPMKVR-ALGLKVALTVKLAQDDLHIMDSLEL 99
Query: 214 PVDDPKYLENLVEERCWGPSVLFVDNT-DYMERNISIVTDQIKHYNIMPAYGEN--NMLK 270
           P  DP+YL  L   R WG SVL VD T + M ++I   T ++K +N++PA G N  +MLK
Sbjct: 100 PTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLK 159
Query: 271 HDTLVITVDALKQIED 286
           H TLV+T+  +  +ED
Sbjct: 160 HQTLVLTLPTVAFLED 175

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
1dmg_A225 Ribosomal protein L4; alpha-beta, ribosome, RNA, S 100.0
3r8s_E201 50S ribosomal protein L4; protein biosynthesis, RN 100.0
3v2d_F210 50S ribosomal protein L4; ribosome associated inhi 100.0
3bbo_G293 Ribosomal protein L4; large ribosomal subunit, spi 100.0
2zjr_C205 50S ribosomal protein L4; ribosome, large ribosoma 100.0
2ftc_D175 Mitochondrial ribosomal protein L4 isoform A, mito 100.0
2zkr_c 421 60S ribosomal protein L4; protein-RNA complex, 60S 100.0
3j21_D255 50S ribosomal protein L4P; archaea, archaeal, KINK 100.0
4a17_C 410 RPL4, ribosomal protein L3; eukaryotic ribosome, r 100.0
3iz5_D 405 60S ribosomal protein L4 (L4P); eukaryotic ribosom 100.0
1vq8_C246 50S ribosomal protein L4E; ribosome 50S, protein-p 100.0
2wwb_H362 60S ribosomal protein L4-B; ribosome, protein EXIT 100.0
3cx5_F146 Cytochrome B-C1 complex subunit 6; complex III, el 90.09
>1dmg_A Ribosomal protein L4; alpha-beta, ribosome, RNA, S10 operon, gene regulation; HET: CIT; 1.70A {Thermotoga maritima} SCOP: c.22.1.1 Back     alignment and structure
Probab=100.00  E-value=8.3e-68  Score=482.38  Aligned_cols=203  Identities=26%  Similarity=0.348  Sum_probs=143.1

Q ss_pred             eeeccCCCCceeeeEEcCCcccCCCCchhHHHHHHHHHHHhCCCCcCCCceeeeecccCCCCccCCCCcccccCCCCCce
Q psy5944          58 VENLDTTEEKHFGFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRL  137 (309)
Q Consensus        58 v~~v~~~~g~~~g~v~L~p~iF~~~~r~dlIh~~V~~q~a~~Rqgta~tKtraEV~GsGRKpwrQKGTGrAR~Gs~rsP~  137 (309)
                      ..+|++.+|+.+|+|+|+++||+.++|.||||++|.||++++|||||+||||+||+||||||||||||||||+||+|+|+
T Consensus         2 ~~~v~~~~g~~~g~v~L~~~vF~~~~r~dlih~~v~~~~a~~Rqgt~~tktRaEv~G~GrKp~rQKGTGrAR~Gs~rsP~   81 (225)
T 1dmg_A            2 QVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGRKPWPQKHTGRARHGSIRSPI   81 (225)
T ss_dssp             EEEEECTTSCEEEEEECCHHHHSSCCCHHHHHHHHHHHHC----------------------------------------
T ss_pred             eeEEEcCCCCEeeEEEcCHHHhCCCccHHHHHHHHHHHHHhccCCccccceeeEeecCCCCCCCCCCCCccccccccCCc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCcccchhhhHHHHHHHHHHHHHHHHHHhhhcCCCccccccCCcccHHHHHHHHHHHhhhcCCCeEEEeccCCCCCC
Q psy5944         138 YTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDD  217 (309)
Q Consensus       138 ~rGGG~af~~~~~~~~~~~~~~~~~~~~~~~~~gP~~Pr~~~~klnkKvr~~lAl~saLS~K~~~~~L~VVd~l~l~~~k  217 (309)
                      |||||++|                         ||+ ||+|+++||+|+| ++||+||||+|+.+++|+|||+|.++.+|
T Consensus        82 ~rGGG~~f-------------------------gPk-pR~~~~klnkK~r-rlAl~sALs~k~~~~~LvVvd~~~~~~~K  134 (225)
T 1dmg_A           82 WRHGGVVH-------------------------GPK-PRDWSKKLNKKMK-KLALRSALSVKYRENKLLVLDDLKLERPK  134 (225)
T ss_dssp             ---------------------------------------CHHHHHHHHHH-HHHHHHHHHHHHHTTCEEEESCCCCSSCC
T ss_pred             eecCceec-------------------------CCc-CccccccCCHHHH-HHHHHHHHHHHHhCCCEEEEeecccCCCC
Confidence            99999999                         999 8999999999999 99999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCC-CceEEEecCCccch---hHHHHHhCCCCceEecccc---------------hh--hhcCCCcEEE
Q psy5944         218 PKYLENLVEERCWG-PSVLFVDNTDYMER---NISIVTDQIKHYNIMPAYG---------------EN--NMLKHDTLVI  276 (309)
Q Consensus       218 Tk~l~~ll~~~~~~-~svL~V~~~d~~~~---nl~~s~rNI~~v~i~~~~~---------------lN--dlLk~d~lVi  276 (309)
                      ||++.++|+.++|+ +++|||++.+  ++   |+.+|+||||+|+++++++               ||  |||++|+|||
T Consensus       135 TK~~~~~L~~l~~~~~~~LiV~~~~--~~~~~n~~~a~RNip~v~v~~~~~~~~~~~~~~~~~~~~lNv~dll~~~~lv~  212 (225)
T 1dmg_A          135 TKSLKEILQNLQLSDKKTLIVLPWK--EEGYMNVKLSGRNLPDVKVIIADNPNNSKNGEKAVRIDGLNVFDMLKYDYLVL  212 (225)
T ss_dssp             HHHHHHHHHHTTCTTSCEEEEECCC--SHHHHHHHHHHTTCTTEEEEECCCCSSCCSSCCCCCCTTCCHHHHHHSSEEEE
T ss_pred             HHHHHHHHHHcCCCCCCEEEEECCC--ccchHHHHHHHhCCCCCEEEecCCcccccccccccCcCcEEHHHHhCCCcEEE
Confidence            99999999999996 7899998653  56   9999999999999999999               99  9999999999


Q ss_pred             cHHHHHHHHHHHh
Q psy5944         277 TVDALKQIEDKLL  289 (309)
Q Consensus       277 T~~Al~~Le~~l~  289 (309)
                      |++||++||++|.
T Consensus       213 t~~Al~~lee~l~  225 (225)
T 1dmg_A          213 TRDMVSKIEEVLG  225 (225)
T ss_dssp             EHHHHHHHHHHHC
T ss_pred             eHHHHHHHHHHhC
Confidence            9999999999873
>3r8s_E 50S ribosomal protein L4; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_C 1p86_C 1vs8_E 1vs6_E 2aw4_E 2awb_E 1vt2_E 2i2v_E 2j28_E 2i2t_E* 2qao_E* 2qba_E* 2qbc_E* 2qbe_E 2qbg_E 2qbi_E* 2qbk_E* 2qov_E 2qox_E 2qoz_E* ... Back     alignment and structure
>3v2d_F 50S ribosomal protein L4; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_F 2hgj_F 2hgu_F 2j03_F 2jl6_F 2jl8_F 2v47_F 2v49_F 2wdi_F 2wdj_F 2wdl_F 2wdn_F 2wh2_F 2wh4_F 2wrj_F 2wrl_F 2wro_F 2wrr_F 2x9s_F 2x9u_F ... Back     alignment and structure
>3bbo_G Ribosomal protein L4; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} Back     alignment and structure
>2zjr_C 50S ribosomal protein L4; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.22.1.1 PDB: 1j5a_K* 1jzy_K* 1jzz_K* 1k01_K* 1nkw_C 1sm1_C* 2zjp_C* 2zjq_C 1jzx_K 3cf5_C* 3dll_C* 3pio_C* 3pip_C* 1nwy_C* 1nwx_C* 1xbp_C* 1pnu_C 1pny_C 1vor_F 1vou_F ... Back     alignment and structure
>2ftc_D Mitochondrial ribosomal protein L4 isoform A, mitochondrial 39S ribosomal protein L3; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_D Back     alignment and structure
>2zkr_c 60S ribosomal protein L4; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} Back     alignment and structure
>3j21_D 50S ribosomal protein L4P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus} Back     alignment and structure
>4a17_C RPL4, ribosomal protein L3; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_C 4a1c_C 4a1e_C Back     alignment and structure
>1vq8_C 50S ribosomal protein L4E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.22.1.1 PDB: 1k73_E* 1k8a_E* 1k9m_E* 1kc8_E* 1kd1_E* 1kqs_C* 1m1k_E* 1m90_E* 1n8r_E* 1nji_E* 1q7y_E* 1q81_E* 1q82_E* 1q86_E* 1qvf_C 1qvg_C 1s72_C* 1vq4_C* 1vq5_C* 1vq6_C* ... Back     alignment and structure
>2wwb_H 60S ribosomal protein L4-B; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Triticum aestivum} PDB: 2wwa_H 2ww9_H 3izc_D 3izs_D 3o58_D 3o5h_D 3u5e_C 3u5i_C 1s1i_D 3jyw_D Back     alignment and structure
>3cx5_F Cytochrome B-C1 complex subunit 6; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.28.1.1 PDB: 3cxh_F* 1ezv_H* 1kb9_F* 1p84_F* 2ibz_H* 1kyo_F* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 309
d2gycc1198 c.22.1.1 (C:1-198) Ribosomal protein L4 {Escherich 3e-19
d1dmga_225 c.22.1.1 (A:) Ribosomal protein L4 {Thermotoga mar 2e-14
d2zjrc1197 c.22.1.1 (C:2-198) Ribosomal protein L4 {Deinococc 4e-12
d2j01f1208 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus t 4e-11
d1vqoc1246 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon 2e-06
>d2gycc1 c.22.1.1 (C:1-198) Ribosomal protein L4 {Escherichia coli [TaxId: 562]} Length = 198 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribosomal protein L4
superfamily: Ribosomal protein L4
family: Ribosomal protein L4
domain: Ribosomal protein L4
species: Escherichia coli [TaxId: 562]

 Score = 82.0 bits (202), Expect = 3e-19
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 32/219 (14%)

Query: 70  GFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERL 129
             + +    FG      ++   +              K   EV  +G+KPW QKG     
Sbjct: 10  SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRAR 69

Query: 130 DGKRRPRLYTGKGEEKEEEEEEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIV 189
            G  +  ++   G                          +T    P    + +   ++  
Sbjct: 70  SGSIKSPIWRSGG--------------------------VTFAARPQDHSQKVNKKMYRG 103

Query: 190 VGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCWGPSVLFVDNTDYMERNISI 249
             L S LS  + QD L +V+   +     K L   +++      ++     D     + +
Sbjct: 104 -ALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDEN---LFL 159

Query: 250 VTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIED 286
               +   ++  A G +  +++  D +V+T DA+KQ+E+
Sbjct: 160 AARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE 198
>d1dmga_ c.22.1.1 (A:) Ribosomal protein L4 {Thermotoga maritima [TaxId: 2336]} Length = 225 Back     information, alignment and structure
>d2zjrc1 c.22.1.1 (C:2-198) Ribosomal protein L4 {Deinococcus radiodurans [TaxId: 1299]} Length = 197 Back     information, alignment and structure
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 246 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query309
d2gycc1198 Ribosomal protein L4 {Escherichia coli [TaxId: 562 100.0
d1dmga_225 Ribosomal protein L4 {Thermotoga maritima [TaxId: 100.0
d2zjrc1197 Ribosomal protein L4 {Deinococcus radiodurans [Tax 100.0
d2j01f1208 Ribosomal protein L4 {Thermus thermophilus [TaxId: 100.0
d1vqoc1246 Ribosomal protein L4 {Archaeon Haloarcula marismor 100.0
d1vqoc1246 Ribosomal protein L4 {Archaeon Haloarcula marismor 84.93
>d2gycc1 c.22.1.1 (C:1-198) Ribosomal protein L4 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribosomal protein L4
superfamily: Ribosomal protein L4
family: Ribosomal protein L4
domain: Ribosomal protein L4
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.5e-66  Score=459.76  Aligned_cols=187  Identities=21%  Similarity=0.295  Sum_probs=181.3

Q ss_pred             eeEEcCCcccCCCCchhHHHHHHHHHHHhCCCCcCCCceeeeecccCCCCccCCCCcccccCCCCCceecCCCcccchhh
Q psy5944          70 GFVNLHPDIFGLVPRLDVITMNIEWQKKYKWVRFDHTKVTNEVERTGRKPWPQKGLIERLDGKRRPRLYTGKGEEKEEEE  149 (309)
Q Consensus        70 g~v~L~p~iF~~~~r~dlIh~~V~~q~a~~Rqgta~tKtraEV~GsGRKpwrQKGTGrAR~Gs~rsP~~rGGG~af~~~~  149 (309)
                      |+|+|+++||+.++|.|+||++|+||++++|||||+||+|+||+||||||||||||||||+||+|||+|||||++|    
T Consensus        10 ~~i~l~~~vF~~~~~~~llh~~v~~~~a~~R~gt~~tKtRseV~g~gkKp~~QKGTGrAR~Gs~rsP~~~gGGva~----   85 (198)
T d2gycc1          10 SALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTF----   85 (198)
T ss_dssp             CCSCCCEECCCSCCCHHHHTTTSSSCTTCCSCCCCSSCSCCCCCCSCSSCSCCCCCCCBTTBCCSCSSSSSCCCSS----
T ss_pred             CeEEeCHHHhCCCcCHHHHHHHHHHHHHhccCCCcccceehhccCCccCcccccCCCCCCCcCcchhhcccCceec----
Confidence            5799999999999999999999999999999999999999999999999999999999999999999999999999    


Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCCccccccCCcccHHHHHHHHHHHhhhcCCCeEEEeccCCCCCCHHHHHHHHHHcC
Q psy5944         150 EEEEEEEEEEEEEEEEEEEITATLNPCGLCRILPVMVHIVVGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERC  229 (309)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~gP~~Pr~~~~klnkKvr~~lAl~saLS~K~~~~~L~VVd~l~l~~~kTk~l~~ll~~~~  229 (309)
                                           ||+ ||+|+++||+|+| ++||++|||.|+++++|+|||++.++.+|||++..+|+.++
T Consensus        86 ---------------------GP~-pr~~~~kl~kK~r-~~al~~aLs~k~~~~~l~vvd~~~~~~~kTk~~~~~l~~~~  142 (198)
T d2gycc1          86 ---------------------AAR-PQDHSQKVNKKMY-RGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMA  142 (198)
T ss_dssp             ---------------------CSC-CSSSCCCCCTTTH-HHHHHHHHHHTTSSSSCCEECGGGGTCCSSHHHHHHHHTTT
T ss_pred             ---------------------Ccc-ccCeEeeHHHHHH-HHHHHHHHHHHHhcCCeEEEeeccccCCcHHHHHHHHhhhc
Confidence                                 999 8999999999999 99999999999999999999999999999999999999998


Q ss_pred             CCCceEEEecCCccchhHHHHHhCCCCceEecccchh--hhcCCCcEEEcHHHHHHHHH
Q psy5944         230 WGPSVLFVDNTDYMERNISIVTDQIKHYNIMPAYGEN--NMLKHDTLVITVDALKQIED  286 (309)
Q Consensus       230 ~~~svL~V~~~d~~~~nl~~s~rNI~~v~i~~~~~lN--dlLk~d~lViT~~Al~~Le~  286 (309)
                      +. ++|||++.  .++|+.+|+||||+|++++++++|  |||+||+||||++||+.||+
T Consensus       143 ~~-~~Liv~~~--~~enl~~S~RNI~~v~v~~~~~lNvydlLk~~~lVit~~Al~~leE  198 (198)
T d2gycc1         143 LE-DVLIITGE--LDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEE  198 (198)
T ss_dssp             CG-GGTTTCCC--CSSSCCGGGSSSSSCCCCCSSSCCHHHHTTTSCCCEEHHHHHHHHC
T ss_pred             cc-eeEEecCc--ccHHHHHHHhCcCCceEeecCCccHHHHhcCCeEEEEHHHHHHhhC
Confidence            86 68888864  479999999999999999999999  99999999999999999985
>d1dmga_ c.22.1.1 (A:) Ribosomal protein L4 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2zjrc1 c.22.1.1 (C:2-198) Ribosomal protein L4 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1vqoc1 c.22.1.1 (C:1-246) Ribosomal protein L4 {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure