Diaphorina citri psyllid: psy6064

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
CPQKKSKKSHLTQNIINLDHPRKNTANQTQSMSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVVKNPNLRVLNSDVKAISNQIDSLMGNAYQKSMESLLPIKSSFLSSYPDFIAPIFVAVITGLLSWGASESAKVNNVLTFANLGTVAIIVFSGLFRLNPANWTIRREAIPPGVRGGSGGFAPFGVNGIVTGAAKCFFGFVGFDGIATTGEETRNPKRNIPLAIILSLLIVFVCYFSIAVVITMIVPYYEQNADAPFPAIFDRLGWPVMKWLVTVGSLFALFTAMFGAFFPLPRILYAMSRDGLLYERLSYVSSRTQTPLLSTALSGVITAVMSAVFKLDQLVDMMSIGTLLAYIIVAICVLLLRYSGDEVVVETCDSEVDFVHVDTLANTYKDMTREDSASTELTNVTDKSQLNIQRDKNQSSNQQQYLSGQNTGRLKFKVPWVPLIPCLSMFMNIYLMINLDVSTWVRFLVWLVLGMVVYFTYSIDHSKQKAK
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccEEccEEEEcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHEEEEEccEEECccccccccccccccccccccccccccccHHccccEEEEEEEccHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccHHHHcccccccccccccccEEEEEEEccccccccccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHEEEcccccccccc
******************DHPRKNTANQTQSMSRLRNLYEALSR*************************************QLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVVKNPNLRVLNSDVKAISNQIDSLMGNAYQKSMESLLPIKSSFLSSYPDFIAPIFVAVITGLLSWGASESAKVNNVLTFANLGTVAIIVFSGLFRLNPANWTIRREAIPPGVRGGSGGFAPFGVNGIVTGAAKCFFGFVGFDGIATTGEETRNPKRNIPLAIILSLLIVFVCYFSIAVVITMIVPYYEQNADAPFPAIFDRLGWPVMKWLVTVGSLFALFTAMFGAFFPLPRILYAMSRDGLLYERLSYVSSRTQTPLLSTALSGVITAVMSAVFKLDQLVDMMSIGTLLAYIIVAICVLLLRYSGDEVVVETCDSEVDFVHVDTLANTYKDMTREDSASTELTNVTDKSQLNIQRDKNQSSNQQQYLSGQNTGRLKFKVPWVPLIPCLSMFMNIYLMINLDVSTWVRFLVWLVLGMVVYFTYSI*HS*****
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CPQKKSKKSHLTQNIINLDHPRKNTANQTQSMSRLRNLYEALSRKKIDVGDDDVSIAEGKNPAGGADGVGKLPLERASDAPQLARVLGLIDLTMLGVGATLGVGVYVLAGSVARNQAGPSVVISFAIAAVTSLFSVVKNPNLRVLNSDVKAISNQIDSLMGNAYQKSMESLLPIKSSFLSSYPDFIAPIFVAVITGLLSWGASESAKVNNVLTFANLGTVAIIVFSGLFRLNPANWTIRREAIPPGVRGGSGGFAPFGVNGIVTGAAKCFFGFVGFDGIATTGEETRNPKRNIPLAIILSLLIVFVCYFSIAVVITMIVPYYEQNADAPFPAIFDRLGWPVMKWLVTVGSLFALFTAMFGAFFPLPRILYAMSRDGLLYERLSYVSSRTQTPLLSTALSGVITAVMSAVFKLDQLVDMMSIGTLLAYIIVAICVLLLRYSGDEVVVETCDSEVDFVHVDTLANTYKDMTREDSASTELTNVTDKSQLNIQRDKNQSSNQQQYLSGQNTGRLKFKVPWVPLIPCLSMFMNIYLMINLDVSTWVRFLVWLVLGMVVYFTYSIDHSKQKAK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Cationic amino acid transporter 3 Mediates the uptake of the cationic amino acids arginine, lysine and ornithine in a sodium-independent manner.confidentQ8WY07
Low affinity cationic amino acid transporter 2 Low-affinity, high capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine). Plays a regulatory role in classical or alternative activation of macrophages.confidentP18581
Low affinity cationic amino acid transporter 2 Low-affinity, high capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine).confidentB3TP03

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0015179 [MF]L-amino acid transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005342, GO:0008514, GO:0005215, GO:0008509, GO:0015075, GO:0022857, GO:0003674, GO:0015171, GO:0046943
GO:0015181 [MF]arginine transmembrane transporter activityprobableGO:0022891, GO:0022892, GO:0005342, GO:0008514, GO:0005215, GO:0008509, GO:0008324, GO:0015075, GO:0022857, GO:0003674, GO:0015174, GO:0015171, GO:0046943
GO:0043231 [CC]intracellular membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0006812 [BP]cation transportprobableGO:0006811, GO:0006810, GO:0044765, GO:0008150, GO:0051234, GO:0051179, GO:0044699
GO:0044446 [CC]intracellular organelle partprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043226, GO:0044422
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0015291 [MF]secondary active transmembrane transporter activityprobableGO:0005215, GO:0022857, GO:0003674, GO:0022804
GO:0015802 [BP]basic amino acid transportprobableGO:0006810, GO:0044765, GO:0015849, GO:0006811, GO:0006865, GO:0015711, GO:0071705, GO:0006820, GO:0008150, GO:0071702, GO:0051234, GO:0051179, GO:0044699, GO:0046942
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3L1L, chain A
Confidence level:very confident
Coverage over the Query: 84-239,262-442,511-566
View the alignment between query and template
View the model in PyMOL