Diaphorina citri psyllid: psy6113

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL
ccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccCEEEEcccccccccccccccHHHHHHHHHHHccccHHHHHHcHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccCEEEEEccccHHcHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccEEEEcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccc
***TGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGG********RKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDL******************TLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALK***
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MINTGKLSGLTIFITGASRGIGKAIALKAAKDGANIVIAAKTAEPHPKLPGTIYSAAKEVEDAGGNCLPCIVDIRDEHAVQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVKASQGLEIQSAVNAAVDKFGGIDILVNNASAISLTDTANTPLKKYDLMNQINARGTYLVSQKCLPYLKKSNHAHILNISPPLNLNPFWFKNHVAYTISKYGMSMCALGMAEEFKGDNIAVNALWPRTAIYTAAIEMLTGGSADAKATSRKPEIMADAAYYILSSNPPSLTGQFLIDDEVLKAQHIDLEQYSYVPNGAAEGSWHIDLKTGSGSSGRGKPSSTVDATLTMTEKNFIALFEGKLKPTSAFMTGKLKISGNLQKAMKLEKLMGALKSKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Hydroxysteroid dehydrogenase-like protein 2 Has apparently no steroid dehydrogenase activity.confidentA4FUZ6
Hydroxysteroid dehydrogenase-like protein 2 Has apparently no steroid dehydrogenase activity.confidentQ4V8F9
Hydroxysteroid dehydrogenase-like protein 2 Has apparently no steroid dehydrogenase activity.confidentQ5RA68

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005875 [CC]microtubule associated complexprobableGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005777 [CC]peroxisomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0042579, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KVO, chain A
Confidence level:very confident
Coverage over the Query: 2-110,170-336
View the alignment between query and template
View the model in PyMOL
Template: 3S8M, chain A
Confidence level:very confident
Coverage over the Query: 8-116,128-131,154-309
View the alignment between query and template
View the model in PyMOL
Template: 1C44, chain A
Confidence level:very confident
Coverage over the Query: 329-406
View the alignment between query and template
View the model in PyMOL
Template: 4DA9, chain A
Confidence level:very confident
Coverage over the Query: 55-96,129-161
View the alignment between query and template
View the model in PyMOL